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DottaandClaude Opus 5.5 46bf913fb9 docs(plans): record the Pi steer duplicate after a restart and its follow-up (#19982)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - A person can steer a running Codex or Pi turn, and since #19970 a
queued follow-up steers automatically
> - Restart recovery (#19962) delivers a steered message that the model
did not read before the restart, exactly once for Codex
> - Pi gives the run log no read evidence for a steer, so after a
restart a Pi steer that the model already read can arrive again
> - The fix needs changes to the closure-pinned Pi distribution, which
waits for the next Pi re-qualification
> - This pull request records the limit and the follow-up plan so they
are not lost
> - The benefit is that the next Pi re-qualification can include the
definitive fix

## Linked Issues or Issue Description

**What is the documentation problem?**
The Pi steering limit after a restart, and its planned fix, were only in
pull request text and session notes.

**Where?**
`doc/plans/2026-11-07-pi-steer-restart-limit.md` (new).

**What should it say?**
Codex delivers an unread steered message exactly once after a restart.
Pi can duplicate a message it already read, and never loses one. The
note also gives the reasons, the follow-up plan (option A), its costs,
and the rejected options.

Refs #19962, Refs #19970

## What Changed

- New `doc/plans/2026-11-07-pi-steer-restart-limit.md`. It covers the
limit, why Pi has no read evidence, the follow-up (forward Pi's native
user `message_start` through pi-acp, acpx, the sidecar and Rust into a
`userMessage` item), its re-qualification costs, and the rejected
options.

## Verification

- Documentation only. Read the note. The facts match
`packages/paperclip-runner/src/steering-delivery.ts`,
`patches/pi-acp@0.0.33.patch`, `pi-closure-pins.ts` and
`rules/acpx-profile-identity.mdc`.

## Risks

- None. Documentation only.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with
tool use.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
canary/v2026.1108.0-canary.7
2026-11-07 23:51:57 -06:00
DottaandClaude Opus 5.5 ccce55ab11 fix(issues): tell callers when a task list page is capped (#19972)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Agents read company tasks through `GET
/api/companies/{companyId}/issues`, often through the runner `call_api`
tool
> - The route caps each page at `limit` (500 by default, 1000 at most)
and returns a bare array
> - A capped page and a complete list look the same, so an agent cannot
tell that rows are missing
> - In an eval with 501 open tasks, the agent got 500 rows and reported
498 tasks as the complete list
> - This pull request adds a "more results exist" signal and the
next-page position, and surfaces it to agents
> - The benefit is that agents page until the list is complete instead
of presenting a partial list

## Linked Issues or Issue Description

**What happened**

The chat eval `tasks.organize-open-work` seeds 501 open Launch tasks.
The agent called `GET /api/companies/{companyId}/issues` through
`call_api`. The route returned exactly 500 rows (the default limit) and
gave no signal that more rows existed. The agent noted that exactly 500
rows was suspicious and that some tasks were missing. It still reported
the partial list as complete.

**Expected behavior**

A capped list response tells the caller that more results exist and how
to get the next page. The agent-facing tool result shows the same signal
next to the data.

**Steps to reproduce**

1. Create 501 tasks with status `todo` in one company.
2. Call `GET /api/companies/{companyId}/issues?status=todo`.
3. See that the response has 500 rows and no header or field that says
more rows exist.

## What Changed

- `server/src/routes/issues.ts`: the company issue list fetches one row
past the page. It then sets `X-Paperclip-Has-More` (`true`/`false`) and
`X-Paperclip-Limit` on every page. A capped page also sets
`X-Paperclip-Next-Offset`, and `X-Paperclip-Next-After-Id` for
`sortField=id&sortDir=asc` cursor paging. Pagination is reported only to
actors who can read the whole company's task list; actors whose rows are
filtered after the query (such as low-trust agents) get no pagination
headers, so the raw page cannot reveal tasks they cannot read.
`oneChildPerParent` lists are ordered by parent first, so they page by
offset and never advertise an id cursor. The body is unchanged (still an
array). The Mine inbox path does not change.
- `server/src/services/native-runtime/runner-api-client.ts`: `call_api`
results for successful responses that carry these headers include
`pagination: { hasMore, truncated, limit, nextOffset, nextAfterId?,
guidance? }`. The guidance tells the agent to repeat the call with the
next `offset`/`afterId` until `hasMore` is false. The field is also
present when the body is saved as an artifact. Routes without the
headers get no new field.
- `server/src/routes/openapi.ts`: the API catalog entry documents
`limit`, `offset`, `sortField`, `sortDir`, `afterId`, the headers and
the `call_api` pagination field.
- Tests for capped, cursor, last, exact-size and default-limit (501
rows) pages in all list projections, for offset-only paging of
`oneChildPerParent` lists, for a low-trust agent receiving no pagination
headers, and for the `call_api` pagination field.

## Verification

- `cd server && npx vitest run
src/__tests__/issues-list-query-parsing.test.ts
src/__tests__/low-trust-red-team-routes.test.ts` — 31 passed.
- `cd server && npx vitest run
src/__tests__/issues-list-query-parsing.test.ts
src/services/native-runtime/runner-api.test.ts` — passes. Without the
source change, 8 of the new tests fail.
- `cd server && npx vitest run src/__tests__/inbox-mine-routes.test.ts
src/__tests__/issue-list-assignee-filter-routes.test.ts
src/__tests__/issue-list-updatedsince-filter-routes.test.ts
src/__tests__/openapi-routes.test.ts
src/services/native-runtime/runner-api*` — 2237 passed, 2 skipped.
- `tsc --noEmit -p server/tsconfig.json` shows no errors in the changed
files.

## Risks

- Low risk. The response body shape does not change. Existing clients
ignore the new headers.
- Each list query reads one more row. The extra row is enriched and then
dropped. The cost is small.
- `call_api` results gain an optional `pagination` field. Consumers that
do not know the field ignore it.
- Agents whose task reads are filtered after the query (low-trust
agents) still get no truncation signal, as before; a raw-page signal
would leak hidden tasks. Pushing their boundary into the list query
would let them have one later.
- Other capped list routes do not set the headers yet. They can adopt
the same headers later.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- Anthropic Claude Opus 5.5 (`claude-opus-5-5`), used through Claude
Code with tool use (shell, file edits, test runs).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 23:50:08 -06:00
DottaandClaude Opus 5.5 bf0d45a4d2 feat(recovery): settle teardown claims of dead claimants on the shared ownership path (#19966)
<!-- Write all pull request text in Simplified Technical English
(ASD-STE100): short sentences, one instruction per sentence, simple
approved vocabulary, and the active voice. -->

## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - A sandbox teardown writes a claim on its environment lease that
fences other cleanup for 15 minutes
> - After a restart, the cleanup sweep ended the fence of a claim whose
claimant had exited, with its own process check
(`releaseLostPendingCleanupClaims`)
> - Phase 2 of the durable ownership plan moves each in-progress record
kind onto one shared owner proof and deletes its bespoke check
> - This pull request registers a settle for
`environment_teardown_claim` and calls the shared path where the sweep
called the bespoke release
> - The benefit is one proof for every kind: a local claimant proves
death by its stamp; another host stays a fence handoff

## Linked Issues or Issue Description

Refs #19965
Refs #19964
Refs #19933

**What happened?**
The teardown claim had its own liveness check
(`controllerProcessExited`) in the pending-cleanup sweep. Each kind with
its own check can drift from the shared rules (PID space, PID reuse,
current boot).

**Expected behavior**
The shared prover judges the claimant stamped for this exact attempt. On
gone, the fence ends now and a counted sweep attempt is refunded once. A
claim held as a fence (another claimant or another host) waits for its
deadline.

**Steps to reproduce**
1. Start a sandbox teardown so the lease holds an in-flight claim.
2. Kill the server.
3. Restart. The claim must be released by the shared ownership path, not
by a separate check.

## What Changed

- `environment-teardown-claim-settlement.ts` (new): compare-and-swap
settle on the exact attempt and claimant. It ends the fence, refunds a
counted attempt, and is single-use. It never acts on a fence owner.
- `recovery/ownership-registry.ts`: `environment_teardown_claim`
registers the settle.
- `heartbeat/recovery.ts`: the sweep calls `settleOwnableKind(db,
"environment_teardown_claim")`. Deleted
`releaseLostPendingCleanupClaims` and its use of
`controllerProcessExited`.
- `environment-cleanup-state.ts`: the attempt cap, attempt key and their
SQL readers move here, so the settle and the sweep share one reader.
- `heartbeat-pending-cleanup-sweep.test.ts`: the overlap barrier now
holds the shared prover instead of the deleted check.

## Verification

- `cd server && npx vitest run
src/__tests__/heartbeat-pending-cleanup-sweep.test.ts
src/__tests__/environment-lease-owner-stamps.test.ts
src/__tests__/ownership-reconciliation-report.test.ts` (embedded
Postgres).
- The existing lost-claim matrix stays green on the shared path: retry
now; no failed-attempt charge for a dead server; one refund when sweeps
overlap; keep a live claim; keep a newer claim that kept an older
record; keep another host's claim; keep a claim without identity; page
past fenced claims.
- New, red before and green here (written after the code): the
reconciler pass ends a dead claimant's fence and refunds its counted
attempt.
- New counter-cases (green): a read-only pass never settles; a live
claimant, another PID space, and an unstamped fence claim keep their
fence.
- Full typecheck is left to CI (local memory limit).

## Risks

- Low risk. The settle keeps the previous release semantics (fence ends,
lease stays `pending_cleanup` and in flight until the sweep claims it
again).
- The stop-only claim still does not renew its fence; a live stop that
runs longer than 15 minutes can still be taken over. This change does
not alter that.
- Stacked on #19965 and #19964. Merge those first.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with
tool use (shell, file edit, embedded Postgres tests).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 23:48:43 -06:00
DottaandClaude Opus 5.5 65f41593d1 fix(runner): tell agents a skill found in a directory is imported, not re-created (#19983)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Agents can add skills to the company library in two ways: author new
content with `create_skill`, or import an existing skill so its source
is kept
> - #18717 told agents in the `create_skill` contract to import "an
existing skill" instead of copying it
> - An agent read "existing" as "already in the company library"
> - It searched the library, found no match, and saved a managed copy of
a SKILL.md from a vetted local directory
> - The copy has no source locator, so update, audit and reset flows
cannot follow the source
> - This pull request says in the same contract that a SKILL.md in a
local directory, repository, URL or catalog is an existing skill even
when the library has no match
> - The benefit is that agents import such skills and keep their
provenance

## Linked Issues or Issue Description

Refs #18717

**What happened**

A person asked the CEO agent: "Find a useful accessibility-review skill
and add it to our company." The conversation pointed to a vetted local
directory with a SKILL.md. The agent called `search_skills`, found no
match, and wrote in its reasoning "No existing accessibility skill. Now
create it via paperclip_create_skill". It saved a `managed` skill with
`sourceLocator: null`. It did not call the import API that the
`create_skill` description recommends.

**Expected behavior**

The agent imports the skill from its directory through `POST
/api/companies/{companyId}/skills/import`. The saved skill is
`local_path` with the directory as its source locator.

**Steps to reproduce**

1. Put a SKILL.md in a directory that a company project workspace
allows.
2. Give the directory path to the agent in chat, and ask it to add the
skill to the company.
3. Look at the saved skill. Before this change, the agent can save a
`managed` copy without a source locator.

## What Changed

- Add one sentence to the `create_skill` description in
`packages/paperclip-runner/src/protocol-actions/create-skill.ts`: a
SKILL.md in a local directory, repository, URL or catalog is an existing
skill, even when the company library has no match, so import it instead
of copying its content.
- Regenerate the semantic action catalog, the semantic tool contracts,
the protocol manifest digest and the seeded catalog digest.
- Extend the existing contract test so that the discovered, live and
scenario descriptions all contain the new rule.

## Verification

- `pnpm exec vitest run
src/semantic-tools/paperclip-semantic-tools.test.ts -t "distinguishes
authored skills"` in `packages/paperclip-runner` passes. The new
assertion fails on the parent, because the parent description does not
contain the sentence.
- `node scripts/generate-semantic-action-catalog.mjs --check`, `node
scripts/generate-protocol-manifest.mjs --check` and `node
scripts/generate-semantic-contracts.mjs --check` pass.
- End-to-end chat eval `skills.find-and-install` (runner-opencode,
local), with this commit cherry-picked onto the eval branch: before, run
42448994428 failed because the agent saved a managed copy. After, run
42450246200 passed. The agent quoted the new sentence in its reasoning,
imported the directory through the import API, and the saved skill is
`local_path` with the vetted directory as its source locator.

## Risks

- Low risk. The change is model-facing text only. It does not change
permissions, routes or tool inputs.
- Agents that author truly new skills still use `create_skill`. The
sentence applies only when a SKILL.md already exists somewhere.

## Model Used

- Anthropic Claude Opus 5.5 (`claude-opus-5-5`), with tool use and code
execution in Claude Code.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 23:47:30 -06:00
DottaandClaude Opus 5.5 d33b3ac263 fix(wake-queue): save temporarily refused work intents and promote them through one path (#19956)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Users send work to agents as assignments, comments and Retries. The
wake queue delivers each one as a run
> - When an admission check refused a wake for a temporary reason, the
wake often ended as a terminal skip, so the work was lost
> - Restart-chaos waves found dropped comments and Retries (RC-37,
s7532) and double delivery (RC-53). Each fix covered one hold type
> - The durable ownership plan (section E) asks for one outbox rule: a
closed set of terminal outcomes, a saved deferral for every temporary
refusal, and one promotion path
> - This pull request adds that rule. It saves messages refused by a
pause, promotes deferred intents from every hold-release event through
one function, and adds a reconciler backstop
> - The benefit is that an accepted message is delivered exactly once
after a pause lifts, and the reconciler reports any intent that is stuck
or dropped

## Linked Issues or Issue Description

Refs #19831 (plan, section E), #19838 (inventory, wake-queue rows and
section 1b), #19927 (Phase 2 data: the I4 false positive), #19702,
#19741, #19829, #19826. Builds on #19944 (section D, merged).

**What happened?**
- A user commented while the agent was paused, or while the company was
paused. Admission refused the wake. Nothing saved the message as
pending, so when the pause lifted, nothing delivered it.
- Hold-release events woke different subsets of workers. A saved intent
then waited out a 30-second refusal backoff after its hold cleared.
- The I4 reconciler check matched free text with a regular expression.
Phase 2 found a false positive: a delivered retry whose error said
"retrying once".

**Expected behavior**
An accepted work intent ends only as delivered, consumed by a later run,
task cancelled, or hard stop. Every temporary refusal saves the intent
as `deferred` with its reason and its release trigger. Every
hold-release event promotes deferred intents through one function
(invariant 4).

**Steps to reproduce**
Pause an agent. Post a user comment on its task. Resume the agent. On
`master` the comment is never delivered as a wake.

## What Changed

- New `server/src/services/work-intent-outbox.ts`:
- `WORK_INTENT_TERMINAL_OUTCOMES`: the closed set of terminal outcomes.
- `TEMPORARY_REFUSAL_TRIGGERS`: maps each temporary refusal code to its
release trigger.
- `promoteDeferredWorkIntents`: the one promotion function. It removes
the 30-second refusal backoff from the matching deferred intents. It
then wakes run dispatch, the saved-receipt worker and stranded-work
recovery, and hints each saved intent of the issue.
- `heartbeat/queue.ts`: the #19829 save-as-deferred block is now a
shared helper. A user's message refused by a paused agent, a paused
company, or a budget pause that is not a reached hard stop is saved with
`executionWait: { reason, trigger, message }`. The caller still gets a
409. The message is saved only when the task's latest run is terminal,
because the release drain promotes a saved message behind that run. A
task that never ran keeps the message in the task, and stranded-work
recovery starts the task once the pause lifts. A `pending_approval`
agent and a task-tree hold are not changed here: the release drain still
fails a promoted wake for a pending approval, and tree holds have their
own resume path.
- Hold-release events call `promoteDeferredWorkIntents`:
  - accounting settled (`run-cost-accounting.ts`);
  - environment lease released (`environments.ts`, two sites);
  - native run projected terminal (`native-run-projection.ts`);
  - budget pause lifted (`budgets.ts`);
  - company reactivated (`companies.ts`);
  - task-tree hold released (`issue-tree-control.ts`);
  - agent lifecycle ready (`agent-lifecycle-driver.ts`).
- Reconciler (`recovery/ownership-registry.ts`,
`ownership-invariant-report.ts`, `native-finalization-reconciler.ts`):
- registers three new kinds: `wake_request_deferred`, `queued_run` and
`scheduled_retry_run`;
- I4 now reads the closed refusal code (the wake `reason`) of accepted
intents, not free text;
- a new I4 check reports a deferred pause refusal whose pause has lifted
for more than 5 minutes. The worker then promotes it as a backstop;
- a lifted pause inside its 5-minute grace window returns its deadline
through `nextDueAt`, and the worker also wakes on agent-lifecycle
signals (company and agent pause changes). So a missed release event is
still checked.
- `doc/SPEC-implementation.md`: adds the rule "Accepted work intents are
delivered exactly once".

## Verification

Each focused file ran alone in one vitest process (`--maxWorkers=1`) on
embedded Postgres. Results at `2875c85fd2`:

| Question | Loop | Elapsed | Result |
|---|---|---|---|
| Is a comment refused by a pause saved, then delivered once after the
pause lifts? | `heartbeat-held-comment-wake.test.ts -t "pause lifts"` |
8 s | 2 pass. With `queue.ts` from `master`, both fail: no intent is
saved |
| Does I4 use the closed code, and does it catch a stuck deferral? |
`ownership-reconciliation-report.test.ts` | 45 s | 20 pass. This
includes the Phase 2 "retrying once" false positive and the case
"paused, then lifted" |
| No regression on the paths that changed | held-comment (15),
archived-company guard (8), undispatched execution wait (32), deferred
receipt work (45), recovery pause durability (16), native run projection
work (55), tree-control routes and services (19, 1, 7) | 8–334 s each |
All pass |

- Exactly-once: each pause test runs two promotions (a release event,
then the reconciler backstop) and many dispatch passes. It asserts one
delivery. The existing consumption tests (RC-53) still pass.
- Server package typecheck passes.
- Speed: nothing new runs before `turn.start`. The new admission work
happens only on a refusal. Promotion runs in the release transaction and
in the background reconciler.
- Not run here: chaos waves. The coordinating session schedules them on
the shared harness.

## Risks

- `promoteDeferredWorkIntents` moves `updated_at` back for deferred
intents that were refused in the last 30 seconds. A busy company with
many release events can retry refused intents more often. Each retry
re-runs normal admission, and the refusal resets the backoff.
- More release sites now wake run dispatch and stranded-work recovery.
These notifications are coalesced per company.
- Lifting a pause is now the operator's explicit authorization to send
what the pause refused, as Send is after a Stop. When the pause stopped
the task's run, the lifted pause issues the task's next explicit wake,
which adopts the saved message once. Other messages queued behind an
acknowledged Stop keep the existing rule. If Stop recovery still holds
the task, the message waits for that recovery.
- An agent pause's stop sweep keeps the messages that the pause deferred
(`preservePauseDeferred`). Terminate and cleanup stops still end them.
- The backstop check reads only pause refusals (`company.inactive`,
`agent.not_invokable`), because those holds can be checked exactly.
Other deferred kinds keep their existing promotion paths.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, with tool use and code
execution in Claude Code.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 23:43:17 -06:00
DottaandClaude Opus 5.5 051834bdc8 feat(chaos): add the on-demand crash-point suite and its manual CI workflow (#19946)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - A control-plane restart between two durable writes leaves an
in-progress record owned by a dead process
> - Random restart-chaos waves found these 20 ms–1 s windows only by
luck
> - #19937 added `crashPoint(name)`, and #19938 put it at 20 durable
write boundaries
> - Nothing yet runs a task, kills the server at a chosen point,
restarts it, and checks the plan's invariants
> - This pull request adds that on-demand suite, as a local command and
as a manual CI workflow (not a required check, per Decision 2)
> - The benefit is a repeatable work list: which boundary breaks which
invariant, for Phases 2–4

## Linked Issues or Issue Description

Refs #19831 (plan, Phase 5 and Decision 2). Refs #19861 (report-only
reconciler used for I1–I7). Stacked on #19938 (call sites), which is
stacked on #19937 (helper).

**Problem**
The named crash points cannot be exercised end to end. No command arms
one point, runs real agent tasks across it, restarts, and grades the
result.

**Expected behavior**
`node scripts/crash-points.mjs --points <glob> --kinds <id> --adapters
<list>` runs one wave per selected point and reports each point as pass,
fail (with failing R rules and violated invariants), not reached, or
harness error. A `workflow_dispatch` workflow runs the same thing on
demand.

## What Changed

- **Runtime arming.** `PAPERCLIP_CRASH_POINT_CONTROL=<file>`, in the
shared helper and the runner mirror. Each hit reads `<token>
<name>[:<nth>]`, and a new token resets the count. It is test mode only:
`NODE_ENV=production` ignores it, and the disarmed path is still one
comparison.
- **`tests/restart-chaos/main.ts --crash-point
<a>:<nth>,<b>:<nth>,...`** (config, types, ledger):
  - one booted server and no Vite UI;
- per point: take an invariant baseline, launch the point's batch, arm
the point, then on rest disarm it and check invariants as violations
that are new since the baseline;
  - every task is graded R1–R6 and T;
  - `crash-point.json` (v2) holds one entry per point.
- **`tests/restart-chaos/supervisor.ts`:**
  - every spawn gets the control file;
- a SIGKILL whose receipt names the child's pid is restarted like K1:
the control file is emptied first, the owned tree is killed, and a
replacement starts. A failed tree cleanup fails the fault;
- the isolated instance pins `PAPERCLIP_IN_WORKTREE=false` (a
`.paperclip/.env` above the checkout otherwise suppressed all
scheduling);
  - `RESTART_CHAOS_HEALTH_TIMEOUT_MS`.
- **`tests/restart-chaos/invariants.ts`:**
- the Phase 1 report-only pass with `record: false`: two real-clock
passes for I1 and I2, and one pass 15 minutes ahead for I3, I4 and I7;
  - spool kinds are read from the wave's instance;
  - an unfinished pass is a harness error;
  - each violation carries its wake and run state as evidence.
- **`tests/restart-chaos/crash-points.ts` and
`scripts/crash-points.mjs`:**
- select points by glob, kind and environment, and run them in one wave;
  - a per-point outcome: pass, fail, not_reached or harness_error;
  - `SUMMARY.md` with a violation evidence column.
- **`.github/workflows/crash-points.yml`**, manual only, under the
paid-workflow contract:
  - a credential-free `authorize` job;
  - a `suite` job in `runner-e2e-paid` whose first step reauthorizes;
  - a frozen install with `--ignore-scripts` and no shared cache;
  - only the selected adapters' keys;
  - the workflow is added to both security-test allowlists.
- **Docs:** "Crash-point suite" in `tests/restart-chaos/README.md`, and
"Built (Phase 5)" plus the first work list in the plan.

## Verification

- Focused tests:
- `pnpm exec vitest run --config tests/restart-chaos/vitest.config.ts
tests/restart-chaos/crash-points.test.ts`;
- `cd packages/shared && npx vitest run src/crash-points.test.ts`: 15
tests, including runtime arming in a real child process;
- `node --test scripts/__tests__/release-verify-workflow.test.mjs`: 72
tests;
  - `tests/runner-e2e/workflow-security.test.ts`: 19 tests.
- Typecheck: `node scripts/typecheck-test-projects.mjs
tests/restart-chaos` passes.
- Loop line: question "how long is one crash-point loop?" | loop: `node
scripts/crash-points.mjs --points <one>` (codex A1) | elapsed 2.7 min
end to end: boot 9 s, crash 9 s after arming, replacement ready in 6 s,
rest about 2 min | result: one point alone takes about 3 min. Before
this change it took about 15 min (one cold boot per point, Vite UI, host
at load 77).
- Full local run, 14 points, codex A1, 11.8 min in all:
- every point was reached (the server killed itself at each one, and the
replacement came back);
  - 11 pass;
- `workspace.finalize.after_start_before_copyback` and
`workspace.finalize.after_copyback_before_done` fail I2 and R6: a
`workspace_finalize` operation stays running after the run succeeded;
- `wake.claim.after_run_running_before_wakeup_claimed` reports I4. Its
evidence shows the wake failed with "…retrying once", and the retry
delivered the work, so this is the known refusal-regex false positive.
- The 6 Daytona-only points were not run.

## Risks

- Test harness and an on-demand workflow only. No product code changes.
- `.github/**` needs a CODEOWNER review. The workflow uses provider
keys, so it refuses non-default branches and actors that are not on the
allowlist, like `runner-full-stack-e2e.yml`.
- `PAPERCLIP_IN_WORKTREE=false` is pinned in every chaos wave, not only
crash-point waves. A chaos instance is never a worktree dev instance, so
scheduling must not be suppressed.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with
tool use (shell, file edits).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 23:41:15 -06:00
DottaandClaude Opus 5.5 5742c42b75 fix(chat): tell agents to write company links as Markdown links (#19981)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - In chat, an agent often gives the person a link to the next place to
act: a task, an approval, a run or an agent profile.
> - Chat guidance gives the correct paths, but it does not say how to
write them.
> - The chat makes links from Markdown links and issue identifiers. It
does not make a link from a bare `/<prefix>/approvals/<id>` path.
> - An agent proposed a hire and wrote the approval as a bare path. The
person could not click it to decide the approval.
> - This pull request adds one sentence to the chat guidance: write
every company link as a Markdown link.
> - The benefit is that the person gets a link they can open.

## Linked Issues or Issue Description

Refs #19344 (similar guidance for completion feedback about created
resources).

**What happened**

In the `agents.hire-needs-approval` chat eval, the CEO proposed a hire
and replied with `- Review the pending hire: /RUN/approvals/<id>`. The
chat rendered the path as plain text. No link to the approval was
rendered. In an earlier run of the same case, the agent wrote
`[/RUN/approvals/<id>](/RUN/approvals/<id>)`, which rendered as a link.
The guidance did not say which form to use.

**Expected behavior**

Company links in chat replies are Markdown links that the person can
click.

**Steps to reproduce**

1. Set a company to require board approval for new agents.
2. Ask the CEO in chat to hire a QA engineer.
3. Look at the reply. Sometimes the approval path is plain text, and you
cannot click it.

## What Changed

- `server/src/services/agent-conversations.ts`: the chat directive now
says to write every company link as a Markdown link, for example
`[Review the approval](/<prefix>/approvals/<approvalId>)`. It says that
a bare path or a path in inline code is not clickable.
- `server/src/__tests__/agent-conversations.test.ts`: assert the new
guidance.

## Verification

- `cd server && pnpm exec vitest run
src/__tests__/agent-conversations.test.ts
src/__tests__/codex-local-execute.test.ts`: 71 passed.
- An end-to-end rerun of the `agents.hire-needs-approval` chat eval with
this change follows on the eval branch.

## Risks

- Low risk. This is a change to guidance text only. The prompt gets one
sentence longer.
- The model can still write a bare path. This change makes that less
likely. It does not rewrite replies.

## Model Used

- Anthropic Claude Opus 5.5 (`claude-opus-5-5`), with tool use and code
execution in Claude Code.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 23:37:07 -06:00
DottaandClaude Opus 5.5 05db5fdd9a fix(agents): hired OpenCode agents inherit the hiring agent's OpenRouter key reference (#19977)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Agents can hire teammates. A hired agent inherits the credential
references of the agent that hired it, so it can run without a separate
setup step.
> - The inheritance map covers Claude, Codex and Grok. It does not cover
OpenCode.
> - An OpenCode CEO hires a QA agent. The board approves the hire. The
new agent has no OpenRouter key, and verification fails with
`harness_auth_failed`.
> - The person approved a working hire, but they get a broken agent that
they must fix by hand.
> - This pull request adds `OPENROUTER_API_KEY` to the inheritance map
for `opencode_local`.
> - The benefit is that an approved OpenCode hire becomes ready with the
same account as the agent that proposed it.

## Linked Issues or Issue Description

Refs #13268 (the change that added credential inheritance for hires).

**What happened**

A native OpenCode CEO (provider `opencode`, `OPENROUTER_API_KEY` stored
as a `secret_ref`) proposed a QA hire with `inheritRuntimeFrom: caller`.
The company requires board approval for new agents. The board approved
the hire. The agent lifecycle verification then failed with
`failureCode: "harness_auth_failed"`, and the agent did not become
ready. The hired agent's `adapterConfig` had no `env`.

**Expected behavior**

The hired agent gets the same OpenRouter secret reference as the hiring
agent. After approval, verification passes and the agent becomes ready.

**Steps to reproduce**

1. Create a company with `requireBoardApprovalForNewAgents: true`.
2. Create a `paperclip_runner` agent with `provider: "opencode"` and
`env.OPENROUTER_API_KEY` as a `secret_ref`.
3. As that agent, call `POST /api/companies/:companyId/agent-hires` with
`adapterType: "paperclip_runner"` and `inheritRuntimeFrom: "caller"`.
4. Read the new agent. Its `adapterConfig.env` has no
`OPENROUTER_API_KEY`.
5. Approve the hire. Verification fails with `harness_auth_failed`.

## What Changed

- `server/src/routes/agents.ts`: add `opencode_local:
["OPENROUTER_API_KEY"]` to `INHERITABLE_AGENT_CREDENTIAL_ENV_KEYS`. This
is the key that AI connections bind for `opencode_local`
(`packages/shared/src/ai-connections.ts`).
- `server/src/__tests__/agent-hire-auth-inheritance-routes.test.ts`: add
a regression test. A native OpenCode parent hires with
`inheritRuntimeFrom: caller` under board approval. The child gets the
same `secret_ref` (with its version). The plain
`OPENCODE_CONFIG_CONTENT` value is not copied.

## Verification

- `cd server && pnpm exec vitest run
src/__tests__/agent-hire-auth-inheritance-routes.test.ts`: 27 passed.
The new test fails without the route change (`expected undefined to
match object { type: 'secret_ref', … }`).
- `cd server && pnpm exec vitest run
src/__tests__/agent-adapter-validation-routes.test.ts
src/__tests__/agent-permissions-routes.test.ts
src/__tests__/agent-hire-ai-connections.test.ts
src/__tests__/ai-connections.test.ts`: 446 passed.
- The failure was seen in the `agents.hire-needs-approval` chat eval
(runner-opencode profile). The approved hire failed verification with
`harness_auth_failed`. An end-to-end rerun with this change follows on
the eval branch.

## Risks

- Low risk. The existing inheritance rules still apply: only
`secret_ref` and `user_secret_ref` values are copied, a key the hire
request supplies wins, the parent must be in the same company and use
the same harness, and a parent with a managed AI connection passes
nothing.
- An OpenCode hire can now use the parent's OpenRouter account. This
matches the existing behavior for Claude, Codex and Grok hires.
- Other OpenCode provider keys (for example `OPENAI_API_KEY`) are not
added. AI connections bind only OpenRouter for `opencode_local`.

## Model Used

- Anthropic Claude Opus 5.5 (`claude-opus-5-5`), with tool use and code
execution in Claude Code.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 23:37:03 -06:00
Devin FoleyandPaperclip ab82ac0191 fix(workspaces): retire recovered workspace copies after a successful turn (#19979)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - With remote (sandbox) execution, every turn ends by saving the whole
working folder, so the next turn can continue on any sandbox.
> - When a run is cut off mid-turn and its task continues in a new
workspace, preparation attaches the dead run's saved workspace under
`.paperclip-recovered/<operationId>`, so the agent can recover
unfinished work.
> - Nothing ever removes that attachment. Every later save archives and
uploads it again, and a new sandbox restores it again.
> - The attachment is a full workspace, `.git` included, so every save
for that task is roughly twice as big. The extra size lasts until the
task ends.
> - This pull request removes an attachment after a run that was shown
it succeeds, and keeps a retired record so it is never attached or shown
again.
> - The benefit is that affected tasks go back to normal save sizes
after their first successful turn, without changing how recovered work
reaches the agent.

## Linked Issues or Issue Description

**What existing behavior does this improve?**
Recovery attachments in remote workspaces
(`.paperclip-recovered/<operationId>`).

**Subsystem affected**
Server: remote workspace preparation and recovery attachments.

**Current behavior**
`retainRemoteRecoveryAttachments` keeps every recorded attachment on
every later preparation, and no code path removes one. On one hosted
instance, 10 active workspaces carried 18 attachments. One task's saves
went from 746 MB to 1,472 MB at a single save and stayed there. The
largest grew from 709 MB to 3.3 GB. A 3.3 GB workspace needs most of a
10 GB sandbox disk during each save. When a task moves again, the new
attachment contains the older one, so the copies nest.

**Proposed behavior**
Each live attachment records the run it was shown to. When that run has
succeeded, the next preparation removes the attachment from the sandbox,
after checking its exact provenance. It keeps a `retired` record, so:
- a sandbox restored from an older save is cleaned up too;
- the attachment is never attached or shown to an agent again.

**Reason and benefit**
A run that saw the attachment and succeeded had a full turn to use it.
Removing it then returns the task's saves to normal size and frees
sandbox disk.

**Breaking changes**
None. Records written before this change have no `presentedToRunId`.
They are stamped on their next preparation and retired after the
following successful run.

Related: none found.

## What Changed

- `remote-workspace-recovery-attachments.ts`:
- New `retiredRecoveryAttachments`. It returns attachments already
retired, and attachments shown to a different run that has since
succeeded.
- `retainRemoteRecoveryAttachments` removes those attachments from the
sandbox and keeps a `retired: true` record for each.
- `attachPreservedRemoteWorkspaceSnapshots` skips retired operation IDs.
- `workspace-recovery-snapshot.ts`: `attachPreservedWorkspaceSnapshots`
also skips retired operation IDs.
- `remote-workspace-transport.ts`: new `removeRemoteRecoveryAttachment`.
- It reuses the attachment probe's checks: a real directory under the
workspace root, and an exact `provenance.json`.
  - It makes read-only directories writable before removing them.
  - It removes `.paperclip-recovered` once it is empty.
- Anything else at that path fails the preparation instead of being
deleted.
- `remote-workspaces.ts`: computes the retired set before attaching. It
writes `presentedToRunId` on each live record, and keeps retired records
unchanged.
- `heartbeat/workspace-preparation.ts`: never shows retired records to
an agent.
- `doc/execution-semantics.md`: describes retirement.

## Verification

- `pnpm --filter @paperclipai/server typecheck`: exit 0.
- New tests:
- `remote-workspace-transport.test.ts`: removal against real sandbox
commands. It removes an attachment with exact provenance, including a
read-only directory, and leaves sibling attachments. It refuses a
foreign proof or a symlinked directory without deleting anything. It
reports a missing attachment, and removes the empty parent folder.
- `workspace-recovery-preparation.test.ts`, new `retired_followup` case.
The run shown the attachment succeeds. The next preparation, on a fresh
sandbox restored from that run's save, removes the attachment and
records it as retired. A later preparation after a failed run still
neither attaches nor shows it.
- `ordinary_followup` (the agent deleted the attachment itself) now also
ends with a retired record instead of an empty list.
- A retired operation ID is not attached again, even to an empty
destination.
- 13 recovery and remote-workspace suites: 836 passed. With the source
change reverted, the 3 new or changed preparation cases and the 5 new
transport cases fail.

## Risks

- **An agent can lose access to recovered work after one successful
turn.** That happens if a successful run never looked at the attachment.
The source run's saved snapshot in storage is not touched, so an
operator can still recover it.
- **Retired records stay in workspace metadata.** There is one small
record per attachment, and each later preparation sends one sandbox
probe per record.
- **Nested attachments are unchanged.** If no turn succeeds between two
moves, the newer attachment still contains the older one. That older
copy may hold work nobody has recovered yet, so this change does not
drop it.
- Low risk overall: the change is limited to remote workspace
preparation and is fail-closed on provenance.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`) in Claude Code, with tool use
(shell, file edits, test runs, read-only database queries). AI-assisted
investigation, change and tests, with human direction.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-07 21:32:03 -08:00
DottaandClaude Opus 5.5 576ba29fff feat(recovery): settle the legacy controller lease on the shared ownership path (#19953)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Legacy (non-native) runs hold a controller lease on `heartbeat_runs`
while the server prepares and dispatches the adapter. The shared
ownership reconciler now settles proven-gone owners (Phase 2 of the
durable ownership plan)
> - The lease stamped only a boot id. The reconciler could never prove
its owner gone (`missing_identity` in the Phase 2 data), and recovery
released it by age: lease expiry (60 s), then a 5-minute age guard on
dispatched runs
> - A hard-killed server's legacy run therefore stayed `running` for up
to 6 minutes after the next boot
> - This pull request records the controller process with the claim,
registers a compare-and-swap settle, and makes live-run recovery use the
shared prover instead of the age guard when the controller is proven
gone
> - The benefit is that a dead controller's run is settled at once,
while a live, unprovable, or previous-release controller keeps today's
behavior

## Linked Issues or Issue Description

Refs #19933 (the settle hook, merged). Stacked on #19950 (migration
0446, registry) and targets its branch until it merges; then it
retargets to master.

**What happened?**
After a hard kill, a dispatched legacy run stayed `running` until its
controller lease expired and its last update was 5 minutes old.

**What did you expect?**
The next boot proves the old controller gone and fails the run as a lost
process at once.

**Steps to reproduce**
1. Start a legacy (non-native) run and let it dispatch the adapter.
2. Kill the server (SIGKILL).
3. Start the server. The run stays `running` for up to 6 minutes.

## What Changed

- `heartbeat_runs.controller_process` (jsonb, migration 0447): `{bootId,
pid, hostHash, processStartedAt}` of the claiming server process. It
names the controller only while its `bootId` equals
`controller_boot_id`. Revocation swaps the boot id, so a revoked lease
never keeps it.
- `legacyControllerClaim` writes it in the same UPDATE (from
`currentControllerProcessStamp()`, no I/O).
- `legacy-controller-lease.ts`: `legacyControllerOwnerStamp`,
`legacyControllerProvenGone` (calls `proveOwnerGone`), and
`settleLegacyControllerLease` (compare-and-swap expiry of the proven
controller's outstanding lease after it wakes live-run recovery).
- `ownership-registry.ts`: `legacy_controller_lease` registers `settle`
and `listForRuns`. The owner is the bound process; other rows are
boot-id fences. The listing covers outstanding leases only.
- `heartbeat/recovery.ts` (3 small hunks): a controller of another boot
that the shared prover proves gone has its live lease settled through
`settleOwnableKind` and skips the age guard. The local child-process
check after it is unchanged, so a live child still keeps the run
running.
- Migration 0447 builds the partial index with `CREATE INDEX
CONCURRENTLY` (heartbeat_runs is a known-large table) and is added to
`MIGRATIONS_WITH_TOP_LEVEL_STATEMENTS`.

Bespoke code deleted: none. The kind had no liveness proof; the age
guard stays for controllers that are not proven gone.

## Verification

- `cd server && npx vitest run
src/services/legacy-controller-lease.test.ts`: 33 passed.
- `cd server && npx vitest run
src/__tests__/ownership-reconciliation-report.test.ts`: 17 passed.
- Red with `recovery.ts` and `ownership-registry.ts` from the base
commit (tests, schema and lease module from this branch): 4 failed, 29
passed. Red: the crash-point reaper test, the expired-lease age-guard
test, the reconciler settle test, the exact-controller CAS test. The
tests were written after the code.
- New tests:
  - the claim stamps this process, and a changed boot id unbinds it;
- crash point: a controller dispatched the adapter and was killed with
its lease live; the startup reaper (default 5-minute age guard) fails
the run as `process_lost` at once;
  - a dead controller's expired lease skips the age guard;
- counter-cases keep the run and lease through the reaper and a
reconciler pass: a live earlier-boot PID, a dead PID in another PID
space, and a previous-release row with no `controller_process`; an
expired lease of a live controller stays behind the age guard;
- a read-only pass (`record: false`) never settles; a recording pass
expires the lease and leaves the run to live-run recovery;
  - settle refuses a controller that changed after the proof.
- Not run locally: typecheck (CI runs it) and the wide suites.

## Risks

- Previous-release story (rules/upgrade-safe-run-state.mdc): rows saved
by the previous release have no `controller_process`. They stay boot-id
fences with today's release (expiry, revocation, age guard). A rollback
ignores the column.
- Unprovable controllers (another host or PID space, unknown space, a
live PID with an unreadable start time) never release early. Their
handoff stays the lease expiry plus revocation, and the age guard. A
different host is never proof.
- Behavior change: a dispatched run whose controller is proven gone is
failed as `process_lost` without the 5-minute wait. The retry decision
is unchanged.
- The settle expires the lease only. Live-run recovery still settles the
run under its own checks. Accounting and workspace obligations are not
touched.
- The index build is concurrent. A cancelled build is retried by the
migrator's invalid-index handling.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with
tool use (shell, file edits, local test runs).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 23:27:54 -06:00
DottaandClaude Opus 5.5 0cb9770d1c feat(recovery): name the owner of teardown claims and login/probe leases (#19965)
<!-- Write all pull request text in Simplified Technical English
(ASD-STE100): short sentences, one instruction per sentence, simple
approved vocabulary, and the active voice. -->

## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Environment leases carry several in-progress records: login/probe
leases and in-flight teardown claims among them
> - The ownership reconciler (durable ownership plan, Phase 2) must know
who owns each record, or invariant I1 reports a gap
> - The ownership data showed one teardown claim and one login/probe
lease with no owner stamp
> - A teardown claim could also show the wrong owner: a controller stamp
left by an earlier attempt named a dead process while a live claimant
held the claim
> - This pull request names an honest owner for both kinds, without a
new write before `turn.start`
> - The benefit is that I1 measures real gaps, and the later settle for
these kinds can trust the owner it is given

## Linked Issues or Issue Description

Refs #19964
Refs #19933

**What happened?**
The ownership reconciler reported `environment_teardown_claim` and
`environment_login_probe_lease` records as I1 `no_owner_stamp`.
Workspace recovery and native export retry claim teardown without a
controller stamp. A login/probe lease never had an owner stamp. A
teardown claim that kept an older attempt's controller stamp was
attributed to that older process.

**Expected behavior**
Each in-progress record names the owner that can still move it: a
process proved by identity, or a fence whose expiry is never proof by
itself. A stamp for a different attempt never names the owner.

**Steps to reproduce**
1. Let workspace recovery claim a pending-cleanup lease (no controller
stamp), or open a login session lease.
2. Run the ownership reconciliation pass.
3. See `no_owner_stamp` for the record, or a dead earlier controller for
a claim that a live claimant holds.

## What Changed

- `recovery/ownership-registry.ts`, `environment_login_probe_lease`: the
owner is the holder process stamped by the write that makes the lease
active (`metadata.leaseController`, added in #19964). A lease saved by
the previous release still names no owner; it ends with its login
session.
- `recovery/ownership-registry.ts`, `environment_teardown_claim`: a
controller stamp counts only when its `attemptId` equals the claim's
`pendingCleanupAttemptId`. Any other claim with an attempt id is a
fence: the attempt id is the token and `pendingCleanupLeaseExpiresAtMs`
(renewed by the claimant) is the expiry. An expired fence stays
unprovable. A claim with no attempt id names no owner.
- Report-only. No settle is registered for these kinds in this change.

## Verification

- `cd server && npx vitest run
src/__tests__/environment-lease-owner-stamps.test.ts
src/__tests__/ownership-reconciliation-report.test.ts` (embedded
Postgres).
- Red on the previous registry, green here (tests written after the
code):
  - login/probe lease is owned by the process whose write made it active
  - login/probe lease is proven gone when that process has exited
- teardown claim never reads a controller stamped for an earlier attempt
(fence held by its token)
- an unstamped teardown claim whose fence expired stays unprovable,
never gone
- Green on both: a stamped claim for this attempt with a dead PID is
gone; an unstamped login lease and an attempt-less claim report I1.
- Full typecheck is left to CI (local memory limit).

## Risks

- Low risk. The change only alters the owner the report-only reconciler
reads. No record is changed.
- Stacked on #19964 (the lease holder stamp). Merge #19964 first.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with
tool use (shell, file edit, embedded Postgres tests).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 23:17:40 -06:00
DottaandClaude Opus 5.5 c0c26188db fix(runner): stamp event generations and record an earlier generation's events as history (#19960)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Native runs execute through the Paperclip Runner, which turns
provider output (Codex, OpenCode, Claude through ACPX) into durable
runner events
> - In the restart chaos campaign, events from an earlier turn or runner
generation failed the current turn about ten times (RC-15, 20, 20b, 20c,
33, 33b, 59 and 61)
> - #19718, #19722, #19772 and #19783 each special-cased one variant,
and other variants still fail the run
> - The durable-ownership plan (section G, invariant 6) asks for one
rule: every event carries its generation and turn, and an earlier
generation's events are recorded as history and never fail the current
turn
> - This pull request stamps the runner generation on every event and
applies one stale-event rule in the ACPX provider state, the Codex
driver (which Runnerd also uses for OpenCode) and the pending
`turn.start` check
> - The benefit is that a late report about a settled or restored turn
no longer stops a healthy turn, while events for a turn the runner never
saw still fail closed

## Linked Issues or Issue Description

Refs #19718, #19722, #19772, #19783

**What happened?**
A runner or provider can report a turn after that turn settled: a
resumed provider reports the lost turn's usage or terminal, an ACPX
sidecar emits a last delta after the turn terminal, or a held failure of
the previous turn sits in front of a new `turn.start`. Several of these
paths fail the current turn: ACPX `AcpxEventScope` rejects any event for
a non-active turn ("named a stale turn"), the Codex driver fails
`turn_binding_mismatch` for a settled turn's late item between turns,
and `runnerdPendingTurnStartFailure` reports any held non-recoverable
failure, whatever turn it names. Runner events carried no generation.

**Expected behavior**
An event for a turn that is not active, and that an earlier generation
accepted or this generation already settled, is recorded as history and
never fails the current turn. An event for a turn the runner never saw
still fails closed.

**Steps to reproduce**
ACPX: settle turn 1, start turn 2, and deliver a late `runtime.event`
for turn 1. Before this change, the provider state returns an error and
the run fails.

## What Changed

- Runner (`durable/state.rs`, `durable/runner.rs`): every event payload
carries `generation`, the runner process generation that emitted it. A
runner process that recovers state starts the next generation
(`begin_recovered_generation`); it is saved with the next normal write,
so recovery adds no write before the first turn. Loading stays pure. Old
saved state loads as generation 0. Outbox events keep their original
generation.
- PRP event schemas v1–v3 declare the optional `generation` property;
generated validators and the manifest are regenerated.
- ACPX (`acpx_event_scope.rs`, `acpx_provider_state.rs`): an event that
names a settled turn of this run becomes a bounded
`stale_generation_event` diagnostic (32 per state) and changes no state.
Unknown turns still fail.
- Codex driver (`codex-session-state.ts`,
`codex-session-notifications.ts`): one predicate, `isHistoryTurn()`: the
turn is not active, and it was restored from the checkpoint (an earlier
generation) or settled in this generation. The classifier's stale-turn
branch, the resume-usage branch, restored-terminal replay and the main
fail point (`notificationNamesActiveTurn`) all use it. A terminal for an
earlier generation's turn is history even when it disagrees with the
checkpoint. A terminal that contradicts a turn this same generation
settled is still a `conflicting_turn_terminal` integrity failure, and a
provider that starts a settled turn again is still rejected.
- Transport (`runnerd-codex-transport.ts`): a pending `turn.start`
ignores a held failure that names another provider turn.
- `DURABLE_TRANSPORT.md` documents the stamp and the rule.

## Verification

- `cargo test -p paperclip-runner-core`: new
`records_late_events_for_a_settled_turn_as_history` (red before),
`stamps_every_event_with_the_runner_process_generation`; two existing
ACPX tests now assert "recorded as history, no state change" instead of
"rejected". Durable tests: 112 passed. `cargo fmt` clean.
- `codex-app-server-driver.stale-generation.test.ts` (new, 9 tests):
late item, delta, terminal and workspace change for a settled turn
during and before the next turn, an earlier generation's conflicting
terminal after recovery, and an unknown turn that still fails. Red on
master: 8 of 9 (the during-turn cases on master already dropped the
event, with a different diagnostic; the between-turn and recovery cases
failed the session).
- `runnerd-pending-turn-start-failure.test.ts` (new): an earlier turn's
held failure no longer fails the pending start; the pending turn's own
failure and a failed run terminal still do.
- `vitest run src/drivers/codex src/live/runnerd-codex-transport`: 787
passed; 2 Codex executable-resolution tests timed out under host load
and pass when run alone.
- `tsc -p tsconfig.json` for the runner package, `check:protocol-types`,
`check:replay-goldens`: clean.
- Not run: chaos waves (the coordinator schedules them on this host).

## Risks

- A late report about a settled turn is now dropped with a diagnostic
instead of failing. A provider that keeps working on a settled turn
could have its output ignored silently; a provider that starts a settled
turn again, or names a turn the runner never saw, still fails closed.
- `generation` is a new optional field. Consumers that do not know it
ignore it, as the PRP contract requires.
- The generation counter is written with the next normal state save, so
there is no new write before `turn.start`.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with
tool use (shell, file edits, test execution). Extended reasoning
enabled.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 23:16:00 -06:00
DottaandClaude Opus 5.5 f858f79678 fix(agents): keep agent termination board-only on the PATCH status route (#19955)
## Thinking Path

- Paperclip lets a board govern which agents exist; terminating an agent
is irreversible and is meant to be a board-only governed action.
- `POST /api/agents/:id/terminate` enforced that with `assertBoard`, but
`PATCH /api/agents/:id` with `{ "status": "terminated" }` ran the same
termination after only the agent-configuration permission check.
- The `agents.retire-agent` chat eval caught it: the CEO agent got 403
from `POST /terminate`, then terminated Morgan through `PATCH` and got
200.
- This change puts one board-only gate in front of both routes, and
makes the denial useful by giving a ready link to the agent's profile,
where a person can terminate it.

## Linked Issues or Issue Description

**What happened**

An agent that is allowed to configure another agent could terminate it
with `PATCH /api/agents/:id` `{ "status": "terminated" }`, bypassing the
board-only check on `POST /api/agents/:id/terminate`.

**Expected behavior**

Termination is board-only on every route. A non-board actor gets 403
with a link to the agent's profile so it can send a person to the
Terminate control.

**Steps to reproduce**

1. As an agent with agent-configuration permission over another agent,
call `POST /api/agents/{id}/terminate` (403).
2. Call `PATCH /api/agents/{id}` with `{ "status": "terminated" }` (200
before this change; the agent is terminated).

## What Changed

- `server/src/routes/agents.ts`: new `assertBoardCanTerminateAgent`,
used by `POST /terminate` and by `PATCH` whenever the requested status
is `terminated`. Board actors pass; others get 403 "Board access
required: only a board user can terminate an agent…" with a Markdown
link to `/<prefix>/agents/<id>`.
- `server/src/__tests__/agent-permissions-routes.test.ts`: both routes
are denied for an agent allowed to configure the target, and neither
terminates, updates, cancels invocations nor logs activity. A board user
can still terminate through `PATCH` status.

## Verification

- `pnpm exec vitest run src/__tests__/agent-permissions-routes.test.ts`
(server): 104 passed; the denial cases fail without the change.
- End to end: the `agents.retire-agent` chat eval (run 42445668869) now
sees 403 on both routes, Morgan stays active, and the agent links
Morgan's profile with the Terminate step.

## Risks

- Any non-board automation that terminated agents through `PATCH` status
now receives 403 and must use a board session. That is the intended
governance boundary.

## Model Used

Anthropic Claude Opus 5.5 (`claude-opus-5-5`), via Claude Code, with
tool use (shell, file editing).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 23:08:44 -06:00
DottaandClaude Opus 5.5 fda58d8cc1 fix(chat): post the complete final reply, not a 4,000-character run-log preview (#19971)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - People talk to agents in chat. The agent's final message becomes the
chat reply.
> - The runner cuts every completed agent message to a 4,000-character
run-log preview. The server then posts that preview as the reply.
> - A long answer, for example a list of 501 open tasks, reaches the
person cut off with "…[truncated]".
> - PR #19959 fixed only the case where the accepted summary starts with
the exact preview text. It missed runs where the final prose differs
from the summary.
> - This pull request keeps the complete final answer in the runner, and
makes the server never prefer a preview over a complete source.
> - The benefit is that the person receives the agent's complete reply.

## Linked Issues or Issue Description

Supersedes #19959.

**What happened**

A chat agent wrote a final answer of about 4,985 characters (all 501
tasks). The posted chat reply was a 4,000-character preview that ended
with "…[truncated]".

**Expected behavior**

The person receives the agent's complete final message. A preview of a
message is never posted when a complete text exists.

**Steps to reproduce**

1. Ask a chat agent (OpenCode or Codex) to list a large set of open
work, so that its final answer is longer than 4,000 characters.
2. Let the run finish.
3. Read the chat reply. It ends with "…[truncated]" at 4,000 characters.

Root cause:

-
`packages/paperclip-runner/runner/crates/runner-core/src/provider_events.rs`:
the codex/OpenCode facade projection of `item/completed` and the ACPX
`AssistantMessage` projection cut the final answer with
`bounded_text(text, MAX_TEXT_CHARS)` (4,000 characters).
- `durable/state.rs` `sanitize_value` caps every string again at 4,096
bytes before the event goes to the server.
- `server/src/services/heartbeat-run-summary.ts`
`resolveHeartbeatRunResponse` gives an explicit `final` agent message
top precedence, so it posts the preview.

## What Changed

- Runner (`provider_events.rs`): a completed `final_answer` agent
message keeps its complete redacted text, up to a new 32,000-character
`MAX_FINAL_AGENT_MESSAGE_CHARS` bound. Progress prose and in-flight
items keep the 4,000-character preview.
- Runner (`durable/state.rs`): `preserve_final_agent_message_text` keeps
the complete redacted text of a completed final agent message when it
fits in half of the transport frame. Otherwise the marked preview stays,
so a large message never fails the frame check.
- Server (`heartbeat-run-summary.ts`):
`readCompletedAssistantMessageCandidate` marks a stored preview as
`bounded`. The resolver never posts a bounded preview while a complete
source exists. It posts a marked adapter final response or the accepted
semantic summary instead
(`bounded_final_agent_message_replaced_by_semantic_summary`). It posts
the marked preview only when no complete text exists
(`bounded_final_agent_message_without_complete_source`). This also fixes
replies from runners that are already deployed.

## Verification

- `cd server && npx vitest run
src/__tests__/heartbeat-run-summary.test.ts`: 86 passed. Six new tests:
a complete final message longer than 4,000 characters is posted in full;
the old exact-prefix case posts the complete accepted answer; a preview
whose prose differs from the summary posts the complete summary (also
with chat precedence); a marked adapter final response wins over a
preview; the marked preview is posted only when nothing complete exists;
a stored preview candidate is marked `bounded`. Five of the six fail
against the `master` resolver.
- `cargo test -p paperclip-runner-core --lib -- final_answer
complete_final`: 3 passed. Both new runner tests fail when the fix is
reverted.
- `cargo test -p paperclip-runner-core --lib`: 581 passed, 3 failed. The
failures are `task_memory::tests::monitor_*` (OOM-kill monitor timing
tests). They do not touch the changed code.
- `cargo test -p paperclip-runner-core --test acpx_event_projection
--test acpx_rich_events --test local_integrity_boundary_golden --test
acpx_provider_events`: all passed. `cargo fmt --check` passes.
- Evidence from the failed eval run: the `item.completed` final
`agentMessage` text was exactly 4,000 characters (3,988 retained plus
the marker). The `run.result.proposed` summary was complete at 4,985
characters.

## Risks

- Larger durable events: a final answer can now be up to 32,000
characters (at most about 128 KB). The outbox keeps the preview when the
text exceeds half of the frame size, so the frame check does not fail.
- Redaction stays the same. The complete text goes through
`redact_sensitive_text_values`, which the preview also used.
- The server treats any final message that ends with "…[truncated]" as a
preview. If an agent writes that text itself, the server posts the
complete accepted summary instead. That summary is also the agent's own
complete answer.
- The runner part reaches users only after a runner release. The server
part fixes replies at once when an accepted summary exists.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- Anthropic Claude Opus 5.5 (`claude-opus-5-5`), agentic coding with
tool use (shell, file edits, test runs).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 23:01:00 -06:00
DottaandClaude Opus 5.5 4aed3056db feat(ui): steer a queued follow-up into the live turn after a 5 s edit window (#19970)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - When a person comments on a task while the agent works, the comment
waits in a queue until the current run ends, and only the next run reads
it
> - Measured locally, a comment posted during a Codex tool call waited
54–68 s for a reply (median 64 s)
> - Codex and Pi can take a message into the live turn ("Steer"), but
today the person must click Steer on each queued message
> - Restart recovery now delivers a steered message that a restart
interrupted (#19962), so steering is safe to do automatically
> - This pull request steers a queued follow-up into the live turn on
its own after a 5-second window in which the person can edit or cancel
it
> - The benefit is a faster reply to mid-turn comments on Codex and Pi,
with no new decision for the person

## Linked Issues or Issue Description

**Feature**
Send a queued follow-up into the running turn automatically when the
runner supports steering.

**Problem**
A follow-up comment posted during a running turn waits for the whole
turn to end and for a new run to start. Steering is available for Codex
and Pi, but only as a manual button on each queued message.

**Proposed behavior**
After a 5-second edit window, the queued message is steered into the
live turn. During the window the row shows "Sending in Xs" with Edit and
Cancel. If steering is unavailable, the message stays queued as before.
Claude, OpenCode and Cursor keep the queue. Steer and Interrupt stay
available as buttons.

Refs #19962

## What Changed

- `queued-message-auto-steer.ts`: one constant,
`QUEUED_MESSAGE_AUTO_STEER_DELAY_MS = 5_000`, a deadline helper and an
eligibility check. A message steers automatically only when all of these
are true:
- steering is available for the queue, and it is a `paperclip_runner_v1`
queue with a queue id and a target run;
  - the person can edit the message;
- it is not an interaction response or a response that requires a fresh
session;
- it is not optimistic, cancelled, already attempted, or open in the
editor.
- `TaskChatQueuedMessages`: countdown row "Sending in Xs" with Edit and
Cancel in place of Steer and the "…" menu. The deadline is `max(message
changed, first eligible) + delay`, so an old queued message does not
send the moment its turn becomes steerable, and an edit restarts the
window. When the deadline passes, the row uses the existing Steer
action, so the server path, idempotency and fallback stay the same.
Cancel returns the row to the normal Steer button. The countdown is
announced once to screen readers, not on every tick.
- `TaskChatThread` turns it on with the constant and passes the message
being edited, so an open edit never sends. The prop stays off by default
for other callers.
- Storybook: `AutoSteerCountdown` (with a play test for Cancel) and
`AutoSteerCountdownMobile` in "Composer / Steering and queued messages".
- Restart chaos TTFT driver: a `midturn` phase measures comment-to-reply
for a comment posted during a 40-second tool call, with `--midturn-mode
queue|steer` and `--midturn-fault K1|K2|K6`. It records the reply count,
so exactly-once delivery is checked.

## Verification

- `pnpm --filter @paperclipai/ui vitest run
src/components/task-chat/TaskChatQueuedMessages.test.tsx
src/components/TaskChatThread.test.tsx`: 434 passed. Seven new
auto-steer tests use fake timers: countdown and send, Cancel, Edit
restarts the window, an open edit never sends, ineligible queues stay
manual, no instant send for an old message, one attempt per revision.
They fail with the trigger disabled.
- `node scripts/check-token-gates.mjs`: clean.
- Storybook in the browser, desktop and mobile: the first row counts
down and steers ("Message steered into the active turn."). The cancelled
row shows the normal Steer button. On mobile the text truncates and the
row fits.
- Mid-turn latency, local, Codex, comment during a 40-second tool call:
queue 54–68 s (median 64 s), steer 47–61 s (median 50 s). The steer was
acknowledged in 0.8–0.9 s. The remaining time is the tool call and the
model, not the hand-off.
- Restart chaos, Codex, steer mode, faults K1, K2 and K6, 2 samples
each, on #19962 plus this branch: 6 of 6 messages acknowledged, still
unread at the fault, recovered, and answered exactly once (before
#19962: 0 of 6).

## Risks

- A message now leaves the queue after 5 seconds unless the person edits
or cancels it. The window and the countdown make this visible, and
steering is only automatic where the provider supports it.
- Pi: a steer the model already read before a restart can arrive again
after recovery, because Pi reports no read evidence (see #19962).
Automatic steering makes this a little more likely.
- If steering fails, the message stays queued and is delivered by the
next run, as today.
- UI only and a test harness. No schema, API or server change.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with
tool use (shell, file editing, browser checks, test execution).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 22:59:44 -06:00
DottaandClaude Opus 5.5 cc072e7c4e feat(recovery): settle orphaned active environment leases on the shared ownership path (#19964)
<!-- Write all pull request text in Simplified Technical English
(ASD-STE100): short sentences, one instruction per sentence, simple
approved vocabulary, and the active voice. -->

## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Agent runs hold environment leases (local workspaces and remote
sandboxes) while they execute
> - A crash between the terminal run write and the lease release leaves
the lease `active` with no holder
> - A sweep released such a lease when the run was terminal and the
lease was idle for five minutes. The age was the only guard against a
race with the live executor, which releases the lease itself with the
run's resource disposition
> - Phase 2 of the durable ownership plan moves each in-progress record
kind onto one shared owner proof (#19933 added the settle hook)
> - This pull request moves `environment_run_lease_active` onto that
path: the lease names its holder, the shared prover judges the holder,
and the settle never destroys a sandbox
> - The benefit is that a dead holder's lease settles on the next pass,
a live holder is never raced, and the five-minute age gate is gone

## Linked Issues or Issue Description

Refs #19933

**What happened?**
An orphaned active environment lease was released by age: "run terminal
plus five minutes" (the reaper in `heartbeat/recovery.ts` and the
live-recovery `orphanLease` worker). The ownership data showed one such
lease settle 119 s after it was ready. Without the age gate the sweep
could flip a lease to `pending_cleanup` (destroy) while the executor or
a recovery path was about to retain it.

**Expected behavior**
A run lease settles when its holder is proven gone, by identity and not
by age. A live holder is never raced. A settle never destroys a sandbox
whose files may still be needed.

**Steps to reproduce**
1. Start a run that holds an environment lease.
2. Kill the server after the run status becomes terminal and before the
lease release.
3. Restart. The lease stays `active` until the five-minute age passes,
then the sweep destroys the sandbox.

## What Changed

- `environments.ts`: the write that makes a lease active (insert and
same-run reacquire) stamps the holder process in
`metadata.leaseController`. The stamp does no I/O
(`environment-lease-controller.ts`).
- `recovery/ownership-registry.ts`: `environment_run_lease_active` lists
leases with their run status. The owner is the run while it is active,
then the stamped holder. It registers `settle` and `listForRuns`.
- `environment-run-lease-settlement.ts` (new): compare-and-swap settle
on the exact row (same run, status `active`, same metadata, terminal
run). A sandbox lease gets the stop-and-retain intent (stop and keep,
never destroy). Other leases move to `pending_cleanup` as before. It
keeps a lease that a pending native export, a legacy shutdown fence, a
shared provider resource, or an accepted native result still needs.
- `recovery/ownership-invariant-report.ts`: `settleOwnableKind` accepts
`currentProcessIdle`. A caller that passes every run this process
executes in `skipRunIds` may treat a current-process owner of another
run as gone (`current_process_idle`). The periodic pass never does this.
- `heartbeat/recovery.ts`: `sweepOrphanedActiveLeases` no longer
releases run leases by age. It runs native workspace preservation first
(a separate obligation), then calls `settleOwnableKind` with this
process's executions. Login and probe leases (no run) keep the idle
sweep until their own change.
- `heartbeat/live-recovery-work.ts`: a run lease is due now; only
run-less leases keep the five-minute idle deadline.
- `sandbox-stop-and-retain.ts`: an ownership settle records a recovery
marker on the intent and keeps `updatedAt`, so the pending-cleanup sweep
stops the sandbox in the same tick.
- Deleted: the age gate for run leases and the page-order bump for run
leases.

## Verification

- `cd server && npx vitest run
src/__tests__/environment-run-lease-ownership.test.ts
src/__tests__/heartbeat-orphaned-active-lease-sweep.test.ts
src/__tests__/ownership-reconciliation-report.test.ts` (embedded
Postgres).
- Red on unchanged master sources, green on this branch (tests were
written after the code):
  - stamps the lease holder in the write that makes a lease active
- settles a lease whose holder died after the run went terminal, on the
next pass (crash-point state: terminal run, dead holder in this PID
space)
  - stops and keeps a dead holder's sandbox instead of destroying it
- leaves a current-process lease to this process: settled only when it
is not executing the run
  - keeps the run fact alone for one release on a single-host server
- names no owner on an ephemeral server
(`PAPERCLIP_EPHEMERAL_SERVER=true`)
- the three updated sweep tests (sandbox stopped and kept, not
destroyed)
- Live-owner counter-cases (green): run still active; another live PID;
another PID space; current process while executing; read-only pass
(`record: false`) never settles; a lease re-stamped after the proof is
not settled; a legacy lease whose run this boot owns is kept.
- Also run green: `recovery.test.ts`,
`heartbeat-observed-workspace-preservation.test.ts`,
`workspace-recovery-warm-handoff.test.ts`,
`environment-service.test.ts`,
`heartbeat-pending-cleanup-sweep.test.ts`,
`native-environment-settlement-work.test.ts`,
`environment-cleanup-work.test.ts`.
- Full typecheck is left to CI (local memory limit).

## Risks

- Behavior change: an orphaned sandbox lease is now stopped and kept,
not destroyed. Workspace preservation and provider auto-delete decide
when it goes away. This can keep stopped sandboxes longer than before.
- A recovery path on another process can mark a run terminal while the
dead executor's stamp is still on the lease. The settle can then win
before that path releases. Because the settle only stops and keeps the
sandbox, files are not lost; the later release continues from the
stop-only intent.
- Previous-release rows: a single-host server keeps the run fact for one
release (a run this boot owns is excluded). An ephemeral server never
releases an unstamped lease; it stays visible as an I1 gap with no
operator action yet.
- No migration. The stamp lives in existing lease metadata.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with
tool use (shell, file edit, embedded Postgres tests).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
canary/v2026.1108.0-canary.6
2026-11-07 22:43:57 -06:00
DottaandClaude Opus 5.5 81f12c21ec fix(server): document the safe company import request body in the API catalog (#19968)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - A CEO agent can preview and apply a company package import through
`POST /api/companies/{companyId}/imports/preview` and `/imports/apply`
> - Agents find API operations and their request bodies in the OpenAPI
catalog
> - The catalog entries for these two safe import routes have no request
body and no description of the safe-route limits
> - An agent then offered the person a `replace` choice that the safe
route rejects
> - This pull request registers the existing preview and import body
schemas and describes the limits
> - The benefit is that agents can resolve name conflicts with `rename`,
`skip` and `nameOverrides`, and do not offer choices that fail

## Linked Issues or Issue Description

**What happened**

A person attached a company package in chat and asked a CEO agent what
the package would add. The package had an agent named Morgan, and the
company already had a Morgan. The agent previewed the import correctly.
It then offered three choices: `skip`, `rename`, or `replace`
("overwrites the existing Morgan"). The safe import route rejects
`replace`. The catalog entries for `/imports/preview` and
`/imports/apply` have no request body, so the agent could not see the
route's fields or limits. PR #19945 fixed the same gap for `/exports`.

**Expected behavior**

The catalog documents the import body, including `source`, `target`,
`collisionStrategy` and `nameOverrides`. It states that the safe route
rejects `replace` and never overwrites an existing agent.

**Steps to reproduce**

1. Read `GET /api/openapi.json`,
`paths["/api/companies/{companyId}/imports/preview"].post`.
2. See that it has no `requestBody`. The legacy
`/api/companies/import/preview` entry has one.
3. Call the safe route with `collisionStrategy: "replace"`. It returns
403.

## What Changed

- Register `companyPortabilityPreviewSchema` and
`companyPortabilityImportSchema` as the JSON request bodies of `POST
/api/companies/{companyId}/imports/preview` and `/imports/apply` in
`server/src/routes/openapi.ts`.
- Add a description of the safe-route limits: target, allowed collision
strategies, and `nameOverrides`.
- Add a regression test in
`server/src/__tests__/openapi-routes.test.ts`.

## Verification

- `cd server && pnpm exec vitest run
src/__tests__/openapi-routes.test.ts` passes (37 tests). The new test
fails on master because the entries have no `requestBody`.
- An end-to-end check runs the `companies.import-preview` chat eval with
this commit cherry-picked onto the eval branch.

## Risks

- Low risk. This changes only API documentation. The routes already
parse these schemas. Runtime behavior does not change.

## Model Used

- Anthropic Claude Opus 5.5 (`claude-opus-5-5`), with tool use and code
execution in Claude Code.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 22:35:16 -06:00
DottaandClaude Opus 5.5 a480335e69 fix(chat): tell agents how to read the company link prefix from a task identifier (#19967)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Chat agents reply with links to tasks, approvals, runs and agent
profiles
> - Each link starts with the company prefix, for example
`/RUN/agents/<id>`
> - The chat guidance said to derive the prefix from the task
identifier, but it did not say how
> - An agent decided that `RUN-1` does not give the prefix and invented
one, so its links were broken
> - This pull request states how to read the prefix and forbids prefixes
built from names, slugs, hostnames or paths
> - The benefit is that agent profile links and other company links in
chat replies open the correct page

## Linked Issues or Issue Description

**What happened**

A person asked a CEO agent in chat to preview and then import a company
package. The chat task was `RUN-1`. The agent's reasoning said: "Task
identifier RUN-1 doesn't give prefix directly." The agent then linked
agent profiles as `/runner-e2e/agents/<id>`. Each link opened
"Organization not found: No organization matches prefix RUNNER-E2E".

**Expected behavior**

The agent links `/RUN/agents/<id>`. The guidance tells the agent that
the prefix is the identifier part before the final hyphen and number.

**Steps to reproduce**

1. Open a chat with a CEO agent in a company whose prefix differs from
its slugified name.
2. Ask it to do something with another agent, for example import a
package that creates an agent.
3. See that the reply can link `/<invented-prefix>/agents/<id>`, which
opens "Organization not found".

## What Changed

- Replace the task-link sentence in `AGENT_CHAT_DIRECTIVE`
(`server/src/services/agent-conversations.ts`). It now says that the
prefix is the identifier part before the final hyphen and number
(`RUN-1` gives `RUN`). It says that all company links use that prefix.
It forbids a prefix built from a company name, slug, hostname or path.
- Add a regression test in
`server/src/__tests__/agent-conversations.test.ts`.

## Verification

- `cd server && pnpm exec vitest run
src/__tests__/agent-conversations.test.ts` passes (46 tests).
- An end-to-end check runs the `companies.import-preview` chat eval with
this commit cherry-picked onto the eval branch.

## Risks

- Low risk. This changes only prompt guidance text. Runtime behavior
does not change.

## Model Used

- Anthropic Claude Opus 5.5 (`claude-opus-5-5`), with tool use and code
execution in Claude Code.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 22:32:38 -06:00
DottaandClaude Opus 5.5 f755361ffe fix(recovery): deliver a steered message the restart lost before the model read it (#19962)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - A user can steer a running Codex or Pi turn: a comment goes into the
live turn instead of waiting for the next run
> - The provider acknowledges the steer at once, but the model reads it
only at its next step, after the in-flight tool call
> - A control-plane restart in that window kills the provider with the
message in memory. Restart recovery starts a continuation turn that does
not carry the message. The message is lost and no error shows
> - The restart chaos harness showed this in 6 of 6 steered runs (Codex,
K1, K2 and K6, 2 samples each): steer acknowledged, run succeeded, no
reply to the steered message
> - This pull request makes restart recovery deliver every acknowledged
steer that the model did not read, exactly once
> - The benefit is that manual Steer no longer loses messages on
restart, and the planned automatic steering can ship on top of it

## Linked Issues or Issue Description

**What happened?**
A comment steered into a running Codex turn got no reply when a
control-plane restart (SIGKILL, SIGTERM or crash loop) happened during
the agent's tool call. The run succeeded, and the steered comment had no
effect.

**Steps to reproduce**
1. Start a Codex task that runs a 40-second command.
2. During the command, post a comment and click Steer. The provider
acknowledges it.
3. Restart the control plane before the command ends.
4. Recovery resumes the turn with a continuation. The agent finishes the
task and ignores the comment.

**Expected behavior**
The agent reads and handles the steered comment once, after recovery.

**Root cause**
The provider keeps acknowledged steering input in memory until its next
model step. The restart continuation
(`paperclip.native-continuation.v1`) only told the model to continue the
current request, so the acknowledged input was gone.

## What Changed

- `unreadSteeredMessageIds` (runner package): derives
acknowledged-but-unread steers from run-log events in order. A
`steering_acknowledgement` item adds the message id (once per id). A
`userMessage` item in the same turn reads the oldest unread steer. Codex
records each steered input as one `userMessage` item when it enters the
conversation. A `userMessage` item in a later turn reads all earlier
steers, because the continuation carries them. `turn.completed` reads
all steers.
- `readUnreadSteeredMessages` (server): reads those facts from
`heartbeat_run_events` (only transport-validated events with a
`sourceEventId`). It also reads the comment or interaction text for the
same company and issue. The run log is the durable record of both
"acknowledged" and "read", so no new column is needed.
- The restart continuation now includes `steeredMessages` and one
instruction to handle them, oldest first. The runtime reads them through
a lazy `getUnreadSteeredMessages` option, only when a restart
continuation starts. Native recovery wires it for every run.
- `queuedInteractionSteeringBody` is extracted, so recovery rebuilds a
steered interaction response with the same text the steer sent.
- Fake Codex gets `--consume-steer`, which emits the `userMessage` item
for an accepted steer, like real Codex.

## Verification

- Red/green live test with real runnerd and fake Codex
(`runnerd-restart-continuation.test.ts`, "delivers a steered message the
restart lost exactly once"): start a held turn, steer it, SIGKILL runner
and provider, restore and recover.
- "unread": the continuation carries the message exactly once. Without
the runtime change this test fails.
- "read" (`--consume-steer`): the continuation does not carry it again.
- Both: after the continuation completes, a later restart has nothing to
deliver.
- `steering-delivery.test.ts`: ordering, dedupe, initial-input,
later-turn and completed-turn rules.
- `unread-steered-messages.test.ts` (embedded Postgres): ignores events
without a source id and messages from other issues. It reads interaction
text, ignores model-output items as read evidence, and returns nothing
after the continuation input.
- `pnpm vitest run src/steering-delivery.test.ts
src/live/runnerd-restart-continuation.test.ts` (runner) and `pnpm vitest
run src/services/native-runtime/unread-steered-messages.test.ts`
(server): pass on the rebased revision.
- `issue-queued-comments-routes.test.ts` and
`native-session-runtime.test.ts -t restart`: pass.
`native-session-resume.test.ts` "archives a damaged prior epoch…" fails
locally on plain `origin/master` too (local runnerd binary); CI runs it
with a fresh build.
- Restart chaos (Codex steer mode, K1/K2/K6) runs after this lands in
the harness slot. Before: 0 of 6 steered messages answered.

## Risks

- Duplicate delivery: a provider that records steered input without a
`userMessage` item, or a `userMessage` event lost in the crash window
before persistence, makes recovery send the message again. The model
then sees it twice. That is safer than losing it, and the instruction
asks the model to handle each one once.
- Pi (ACPX) steering has no `userMessage` read evidence today, so a Pi
steer that the model already read before a restart may arrive again in
the continuation.
- Only the restart continuation carries the messages. Other recovery
paths start after a completed turn, which already read every steer.
- No schema or migration change. A session saved by an earlier release
resumes normally; its run log already holds the acknowledgement events.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with
tool use (shell, file editing, test execution).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 22:22:52 -06:00
DottaandClaude Opus 5.5 bf3a067076 feat(recovery): settle the finalizer and cleanup leases on the shared ownership path (#19950)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Native runs keep their ownership in `native_run_finalizations`, and
the shared ownership reconciler now settles proven-gone owners (Phase 2
of the durable ownership plan)
> - The finalizer lease (`native-finalizer:*`, 5 min) and the
retained-session cleanup lease (`native-cleanup:*`, 60 s) recorded only
a random token. They named no holder process
> - A server killed while it finalized or cleaned up kept the run
waiting for the whole lease. The lease was released by age alone. A
graceful shutdown also keeps an in-progress finalizer lease for the next
boot to wait out
> - This pull request records the holder process with each claim and
moves both kinds onto the shared prover and a compare-and-swap settle
> - The benefit is that a dead holder's run continues in the first pass
after boot, and a live or unprovable holder is never released

## Linked Issues or Issue Description

Refs #19933 (the settle hook and the first moved kind, merged).

**What happened?**
A finalizer or cleanup lease whose server process died stayed held until
the lease expired (5 min or 60 s). The run stayed `running` and its
follow-up work waited.

**What did you expect?**
The next boot proves the dead holder gone and frees the lease at once. A
live holder, or one that cannot be proven gone, keeps its lease.

**Steps to reproduce**
1. Accept a native result and let the finalizer claim it.
2. Kill the server (SIGKILL) before the finalizer commits.
3. Start the server. The run stays `running` for up to 5 minutes.

## What Changed

- `native_run_finalizations.lease_holder` (jsonb, migration 0446):
`{token, bootId, pid, hostHash, processStartedAt}` of the process that
took a token-only lease. It names the holder only while `token` equals
`lease_owner`, so renewals keep it and a later lease never inherits it.
The executor's `controller_*` columns are not changed.
- The finalizer claim (`native-run-finalizer.ts`) and the cleanup claim
(`native-session-executor.ts`) write it in the same UPDATE as the lease,
from `currentControllerProcessStamp()` (no I/O).
- New `native-token-lease-settlement.ts`: compare-and-swap settle that
expires exactly the proven-gone holder's outstanding lease, after it
notifies the finalization or cleanup work that the expiry frees.
- Both claims also wake the ownership worker queue in their transaction,
so a quiet worker watches the new holder (Greptile round 1).
- `ownership-registry.ts`: `native_finalizer_lease` and
`native_cleanup_lease` register `settle`. Their owner is the holder
process; rows without a holder keep the token fence. Listings cover
outstanding leases only.
- `heartbeat/recovery.ts`: restart recovery settles both kinds before it
finalizes and schedules cleanup. A failure is logged and the reconciler
pass retries it.
- Two sparse partial indexes on `lease_expires_at` for the two listings,
so the settle watch re-check stays indexed.

Bespoke code deleted: none. These kinds had no liveness check; their
only release was lease age (the takeover in the claim), which stays as
the fence for unprovable holders.

## Verification

- `cd server && npx vitest run
src/__tests__/heartbeat-native-restart-suspension.test.ts -t
"finalizer|cleanup|holder|exact lease"`: 12 passed (rerun after the
rebase on master). The crash-point test also asserts the ownership wake
for its run; it fails without the signal.
- `cd server && npx vitest run
src/__tests__/ownership-reconciliation-report.test.ts`: 17 passed.
- Red on the base branch (server code at `bea3bfb20b`, tests and schema
from this branch): 7 new tests fail, 5 pass (the 5 are existing tests).
Red: the crash-point restart test, the two reconciler settle tests, the
three live/unprovable counter-cases (owner was a token fence), and the
exact-lease CAS test. The tests were written after the code.
- New tests:
- crash point: a finalizer claim was written and its holder killed
before commit; the next restart finalizes the run, and this boot's claim
stamps itself as holder;
- a dead finalizer or cleanup holder is settled by a recording pass,
never by a read-only pass (`record: false`); the accepted result and
phase are untouched;
- live counter-cases: a live earlier-boot PID (`pid_alive`), the current
boot (`current_process`), a dead PID in another PID space
(`different_process_space`, unprovable) keep the lease through a pass
and a restart;
- a holder written for another token, and a holderless row of the
previous release, stay token fences, also with
`PAPERCLIP_EPHEMERAL_SERVER=true`;
- settle refuses a lease taken over after the proof
(`owner_changed_since_proof`).
- Not run locally: typecheck (CI runs it) and the wide suites.

## Risks

- Previous-release story (rules/upgrade-safe-run-state.mdc): rows saved
by the previous release have no `lease_holder`. They stay token fences
and the existing claim takes them over at expiry. Neither lease outlives
5 min, so this covers at most 5 min after the upgrade. A rollback
ignores the new column.
- Unprovable holders (other host or PID space, unknown space): no
operator action. The lease is short and self-expiring; at expiry the
next claim takes it over and the old holder's next token
compare-and-swap fails. That fence is the handoff. A different host is
never proof.
- The settle only expires a lease. Finalization and cleanup still run
under their own checks (cleanup keeps its maintenance-history proofs).
Settling ownership does not settle the accepted result, workspace
preservation, or accounting.
- Migration adds a nullable column and two partial indexes on a sparse
predicate. Low risk.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with
tool use (shell, file edits, local test runs).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
canary/v2026.1108.0-canary.5
2026-11-07 22:16:34 -06:00
DottaandClaude Opus 5.5 ca34bed257 test(native): exited-remote-runner budget case follows provider-work attempt charging (#19963)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Two restart-recovery PRs merged independently: #19951 lets a remote
runner that exited before provider work bootstrap again, and #19948
charges a restart attempt only when the provider accepted a turn.
> - Together they change one of #19951's test expectations: at the last
attempt, the exited runner is no longer charged, so it bootstraps again
instead of hitting the budget.
> - That test now fails on master in `Verify Paperclip Runner (vitest
native server)`, which blocks other PRs.
> - This pull request updates the test to the combined behavior. Product
code does not change.
> - The benefit is a green master, with the generation-cap bound on
repeated exits still under test.

## Linked Issues or Issue Description

Refs #19951, #19948, #19950 (blocked by this failure).

**What happened?**
On master, the test "keeps an exited remote runner's retry held when the
bootstrap budget is spent" receives `bootstrap_incomplete` with
`chargesProviderAttempt: false` instead of `blocked /
execution_recovery_budget_exhausted`.

**What did you expect?**
The test should match the combined behavior: uncharged at the last
attempt, and blocked once the controller generation cap is reached.

**Steps to reproduce**
1. `cd server && npx vitest run
src/services/native-runtime/native-runner-restart-recovery.integration.test.ts
-t "exited remote runner"` on master fails.

## What Changed

- Removed the stale budget row from the exited-runner counter-cases.
- Added two cases. An exited runner at attempt 3 bootstraps without
being charged. At `NATIVE_PROGRESS_CREDIT_GENERATION_LIMIT` it blocks
with `execution_recovery_budget_exhausted`. These mirror #19948's own
cases.

## Verification

- `cd server && npx vitest run
src/services/native-runtime/native-runner-restart-recovery.integration.test.ts
-t "exited remote runner|relaunched remote runner|generation cap"`: 11
pass.

## Risks

- Low. Test-only change. Repeated runner exits before provider work stay
bounded by the generation cap, which the new case covers.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, in Claude Code with
tool use (shell, file edits).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [ ] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 21:52:54 -06:00
DottaandClaude Opus 5.5 f6cb3e43f4 fix(admission): admit new work independent of other runs' cleanup and accounting (#19944)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Budget admission decides if new agent work can start in a company
> - Five admission gates waited on the cleanup or accounting of other
runs
> - The restart-chaos campaign found that these gates froze companies
for up to 10 minutes, caused false budget pauses, denied in-run writes,
and dropped wakes, comments and Retries
> - The durable ownership plan (Decision 1) removes the company-wide
accounting gate. It does not narrow it again
> - This pull request removes the five gates. Unfinished accounting now
adds its bounded estimate to exposure
> - The benefit is that one run's unsettled accounting never stops the
other work in its company

## Linked Issues or Issue Description

Refs #19831 (plan, section D), #19838 (inventory, finding 3), #19927
(Phase 2 reconciler data), #19497, #19724, #19826.

**What happened?**
Admission refused new work in these cases, with no reached hard stop and
no pause:
- a terminal run awaited accounting (`waitingRunCount`);
- a native run recovered its accounting (`recoveringRunCount`);
- a budget-owned scope hold awaited reconciliation, after the hard stop
no longer applied;
- a budget input was older than 15 s (`budget_evaluation_work`);
- the predecessor run row of a task was missing (`hasPendingRunCleanup`
failed closed).

**Expected behavior**
Admission never waits on the cleanup or accounting of another run. Only
a reached hard stop, an explicit pause or an inactive company refuses
new work (invariant 3).

**Steps to reproduce**
Make a company with an active budget policy. Leave one failed run with
`cost_accounting_pending = true`. Request work for another agent. On
`master` admission refuses with "Company cannot start work while
completed runs await accounting."

## What Changed

- `budgets.ts`: admission refuses only for a reached hard stop or an
explicit pause. The code removes `observedBlocks`, the
`recoveringRunCount` check, the stale `budgetHeld` refusal and the 15 s
input-age gate. It also removes the unused
`inspectInvocationEligibility`. `reconcileScope` no longer returns
accounting holds.
- `budget-exposure.ts`: removes the `waiting` and `recovering`
aggregates and the own-task subquery. The admission query is smaller.
Unfinished accounting stays exposure: the larger of the held reservation
and the observed cost.
- `budget-evaluation-work.ts`: removes `oldestBudgetInputAt`, which
nothing reads now.
- `execution-blocker.ts`: `hasPendingRunCleanup` returns false for a
missing run row. A run row that is deleted removes its finalization
coordinator and nulls its lease references, so the row owns nothing. A
predecessor that owns a lease or a coordinator still holds the successor
of its own task.
- `recovery/ownership-invariant-report.ts`: the I3 check no longer
mirrors the removed gate. It reports a wake request or a run that was
refused with an accounting-hold reason. Any such report is a regression.
- `doc/SPEC-implementation.md`: adds the product rule "Admission is
independent of cleanup and accounting". `doc/execution-semantics.md` is
aligned.

## Verification

- New `server/src/__tests__/admission-independent-of-cleanup.test.ts`,
on embedded Postgres. It has one case per gate. All six cases fail on
`master` and pass here. A seventh case (an explicit pause still refuses)
passes on both. One case also asserts invariant 3 together with
exposure: two failed runs that each hold a 400-cent reservation fill a
1000-cent budget, and a hard stop still refuses.
- Existing tests that asserted the old gates now assert admission
(invariants 3 and 4): `closed-native-receipt-accounting`,
`budgets-service`, `budget-evaluation-work`,
`heartbeat-held-comment-wake`, `ownership-reconciliation-report`. In
`heartbeat-held-comment-wake`, each saved comment, Retry, assignment and
continuation is delivered exactly once while another run's accounting is
pending. Settling accounting later does not deliver it again.
- All six files pass locally, one file per process. The server package
typecheck passes.
- Speed: admission is on the turn path. This change only removes work
from it: two correlated aggregates, one own-task subquery and one
`budget_evaluation_work` read per policy. No wait or I/O is added before
`turn.start`.
- Not run here: the chaos waves (K13 storm, K6 crash loop, K4 long
holds). The coordinating session schedules them on the shared harness.

## Risks

- Behavior change: work starts while accounting for other runs settles.
Spend stays bounded by the reservation capacity check and the hard stop,
which read the ledger plus observed cost. A run that has no reservation
and no observed cost adds zero exposure until its charge commits. This
is the gap that Decision 1 accepts. Budget enforcement was already best
effort (SPEC 11.6).
- A budget-owned pause with no reached hard stop no longer refuses work
in budget admission. The paused company or agent is still refused by the
existing pause checks until the budget worker lifts the pause.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, with tool use and code
execution in Claude Code.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 21:46:39 -06:00
DottaandClaude Opus 5.5 7213f64962 fix(heartbeat): write spawn identity and event sequence in one run update (#19954)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - The heartbeat records the provider process identity when a native or
legacy run spawns its process
> - This write updated the run row and then reserved the event sequence
with a second UPDATE of the same row
> - PostgreSQL re-checks every foreign key on a row that the current
transaction already changed, so the second UPDATE took KEY SHARE on the
issue, the predecessor run, and the other parent rows
> - A transaction that held one of those rows FOR UPDATE blocked spawn
persistence, and the failed write ended a user's Retry as
`native_session_interrupted`
> - This pull request writes the identity and reserves the sequence in
one UPDATE, and it retries deadlock and serialization failures of the
spawn write
> - The benefit is that a user's Retry no longer fails because an
unrelated transaction holds the issue or the failed predecessor run

## Linked Issues or Issue Description

**What happened**

A user clicked Retry on a failed native run in the
`runs-adapters.inspect-failed-run` chat eval (embedded PostgreSQL, one
server process). The retry run failed with `native_session_interrupted`.
Its error was `Failed query: update "heartbeat_runs" set
"next_event_seq" = "heartbeat_runs"."next_event_seq" + 1 ...`. The query
started at 01:51:04 and failed at 01:51:16. The OpenCode driver awaits
`onSpawn` before its health check, so `native.session.execute` failed
after 12002 ms. The stack showed `allocateHeartbeatRunEventSeq` inside
`appendHeartbeatRunEvent`, called from
`persistHeartbeatRunProcessMetadata`. The process identity was lost
(`processPid` stayed null). The server log does not include the
PostgreSQL cause code.

**Expected behavior**

Spawn persistence must not wait on locks for unrelated parent rows. A
transient deadlock or serialization failure must be retried. It must not
end the run.

**Steps to reproduce**

1. Create a run whose `issue_id` and `retry_of_run_id` point at an issue
and a predecessor run.
2. In a second connection, begin a transaction and run `SELECT ... FROM
issues WHERE id = <issue> FOR UPDATE` (or lock the predecessor run).
Keep the transaction open.
3. Call `persistHeartbeatRunProcessMetadata` for the run.
4. Before this change, the call blocks on the `next_event_seq` UPDATE
until the second transaction ends. If that transaction then waits on the
run row, PostgreSQL reports a deadlock.
`server/src/services/heartbeat/process-identity-persistence.test.ts`
reproduces step 4.

Root cause: `server/src/services/heartbeat/run-lifecycle.ts`
(`persistHeartbeatRunProcessMetadata`) updated the run row, then
`appendHeartbeatRunEvent` called `allocateHeartbeatRunEventSeq`
(`server/src/services/heartbeat-run-events.ts`), which updated the same
row again. PostgreSQL's `RI_FKey_fk_upd_check_required` always fires the
foreign-key checks when the old row version was written by the current
transaction. The checks take KEY SHARE on each referenced row, and KEY
SHARE conflicts with FOR UPDATE.

## What Changed

- `appendHeartbeatRunEvent` accepts a narrow `runUpdate` option (process
identity columns only). `allocateHeartbeatRunEventSeq` applies these
columns in the same UPDATE that reserves the sequence. Deduplicated
receipts (native source, retry exhaustion) reject `runUpdate`, because
they do not allocate.
- `persistHeartbeatRunProcessMetadata` reads the run binding, appends
`native.process_identity_recorded` with the identity as `runUpdate`, and
returns the updated row. The run row now gets one UPDATE in this
transaction.
- New `retryTransientRunWrite` retries SQLSTATE `40P01` and `40001` up
to four times. The lifecycle `persistRunProcessMetadata` and the legacy
cleanup-intent wrapper in `heartbeat.ts` use it. The legacy wrapper
still updates the run row a second time when it records the cleanup
intent, so the retry covers a deadlock there.
- New regression test
`server/src/services/heartbeat/process-identity-persistence.test.ts`.

## Verification

- `npx vitest run
src/services/heartbeat/process-identity-persistence.test.ts` (from
`server/`): 3 passed. Without the `run-lifecycle.ts` change, both lock
cases fail with `expected 'blocked' not to be 'blocked'` after 3 s.
- `npx vitest run src/__tests__/heartbeat-run-event-sequencing.test.ts
src/services/heartbeat/run-lifecycle.test.ts`: 42 passed.
- `npx vitest run src/__tests__/heartbeat-process-recovery.test.ts -t
"<the four tests that call persistHeartbeatRunProcessMetadata>"`: 5
passed.
- `tsc --noEmit -p server`: no errors in the changed files. The only
error comes from a local workspace-link mix in `packages/adapter-utils`,
which this change does not touch.
- I did not run `pnpm verify` or the full suite locally. CI supplies
that coverage.

## Risks

- Low risk. The written columns, the event type, the payload, and the
sequence order do not change.
- The event payload `processStartedAt` now comes from the value that the
transaction writes, not from a re-read of the row. The value is the
same.
- An event insert still checks its own `agent_id` and `company_id`
foreign keys. A transaction that holds the agent row FOR UPDATE can
still delay the spawn write. That wait is the same for every event
writer, and this change does not alter it.
- Other paths that update a run row and then append an event in the same
transaction keep the second-UPDATE foreign-key checks. This change fixes
the spawn identity path that lost the run.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- Anthropic Claude Opus 5.5 (`claude-opus-5-5`), used through Claude
Code with tool use (shell, file edits, embedded PostgreSQL experiments).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 21:39:43 -06:00
DottaandClaude Opus 5.5 779913333a fix(documents): say whether an exact revision read is still current (#19939)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Task documents keep a revision history, and agents read and restore
revisions through the API
> - The exact-revision read returns one revision, but it does not say if
that revision is still current
> - An agent read the revision that it restored earlier by its ID and
reported it as "latest", but another person had saved a newer edit
> - This pull request adds the document's current revision to the
exact-revision read
> - The benefit is that a pinned read cannot pass as a read of the
current document

## Linked Issues or Issue Description

**What happened**

In a chat eval, the agent restored a plan revision. Then another person
saved a new revision. The user asked the agent to read the current plan.
The agent called `GET
/api/issues/{id}/documents/plan/revisions/{revisionId}` with the ID of
its own restored revision. The response did not show that a newer
revision existed. The agent reported the old revision as the latest and
said that the read confirmed this.

**Expected behavior**

A read of one exact revision must show if that revision is still
current, and which revision is current. Then the reader can see a newer
edit and read the current document.

**Steps to reproduce**

1. Save two revisions of a task plan.
2. Call `GET
/api/issues/{id}/documents/plan/revisions/{firstRevisionId}`.
3. See that the response gives no sign that revision 2 is the current
revision.

## What Changed

- `getIssueDocumentRevision` now also returns `latestRevisionId`,
`latestRevisionNumber` and `isLatest`.
- Shared type `ExactDocumentRevision` describes this response. The UI
client uses it.
- The OpenAPI description of the exact-revision read names these fields
and points to `GET /api/issues/{id}/documents/{key}` for the current
text.
- The service test checks `isLatest` for an older and a current
revision.

## Verification

- `cd server && pnpm exec vitest run
src/__tests__/documents-service.test.ts
src/__tests__/openapi-routes.test.ts` (42 passed).
- `npx tsc --noEmit -p packages/shared` passes.

## Risks

- Low risk. The change only adds fields to a read response. No caller
removes or renames a field. No migration.

## Model Used

- Anthropic Claude Opus 5.5 (`claude-opus-5-5`), with tool use and code
execution.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

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---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 21:29:24 -06:00
DottaandClaude Opus 5.5 a4a3e342ec fix(recovery): charge a restart attempt only when the provider accepted a turn and made no progress (#19948)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - A run has an execution recovery budget: three provider attempts for
native runs, and two failure retries for legacy runs
> - In the restart chaos campaign, control-plane restarts used up that
budget for runs that were healthy (RC-22, 22b, 22c, 40 and 60)
> - #19720 and #19747 fixed two variants with watermark heuristics, and
legacy interrupted preparation still spent the failure budget
> - The durable-ownership plan (section F, invariant 5) asks for one
rule: charge an attempt only when a recorded outcome proves that
provider work started and no progress followed
> - This pull request adds that rule and moves the native restart charge
and the legacy preparation retry onto it
> - The benefit is that a restart never spends budget for work the
provider never started, while real failure loops and crash loops stay
bounded

## Linked Issues or Issue Description

Refs #19720, #19747, #19856

**What happened?**
A control-plane restart charges a provider attempt by heuristics. The
first crash restart always charges. A later restart charges unless the
previous resume had no start evidence (#19747) or completed work
(#19720). A runner that spawned but whose provider never accepted a turn
counted as started, so a K6 crash loop could still spend the budget.
Legacy runs whose preparation a restart interrupted
(`providerWorkStarted: false`) spent `failureRetries`, the same counter
as real failures (`execution-recovery-attempt.ts`).

**Expected behavior**
An attempt is charged only when the provider accepted a turn
(`turn.accepted` or `turn.started`) and no accepted turn then completed
work. A startup before spawn, a runner that spawned but was never
admitted, and a `turn.start` the provider did not accept are not
charged. The generation-12 cap still bounds uncharged restarts.

**Steps to reproduce**
Start a native run at its last attempt. Kill the controller after the
runner spawns but before the provider accepts a turn. Before this
change, the next restart claim blocks the run with
`execution_recovery_budget_exhausted`.

## What Changed

- New `server/src/services/native-runtime/provider-attempt-outcome.ts`:
the one rule. `readProviderAttemptOutcome()` returns
`provider_not_started`, `provider_started_without_progress` or
`provider_progressed` from run events. `providerAttemptChargesBudget()`
charges only the second. `providerAttemptWindowStart()` starts the
attempt window at the latest `native.process_start_requested`, so
earlier work never counts for a later attempt.
`PROVIDER_ATTEMPT_CREDIT_GENERATION_LIMIT` (12) is the shared cap.
- `restartResumeKeepsAttempt()` (`native-restart-recovery.ts`) now
applies that rule to the attempt the restart interrupted, including the
first restart. It keeps the unstarted-resume carry from #19747, the
reattachment rule (an adopted provider counts as started), the drain
exemption from #19625, and the generation-12 cap. A history entry from
an older release without a recorded position still charges.
- Legacy runs: `interrupted_preparation` is now an uncharged retry lane
(`execution-recovery-attempt.ts`). It keeps its own counter, bounded at
the same cap (12), and never changes `failureRetries`. `retries.ts` uses
the longest transient delay after the second lane attempt.
- `doc/execution-semantics.md` states the rule.
- Accounting has its own "provider work started" readers (inventory
Summary finding 5). Phase 3 owns those; this PR exposes the rule for
them to adopt and does not change them.

## Verification

- `native-runner-restart-recovery.integration.test.ts` (embedded
Postgres, real `claimNativeRestartRecoveries`): 129 passed. New cases,
red on master:
- not charged at the last attempt for a claimed remote bootstrap, a
remote bootstrap retry, and a claimed unlaunched remote run;
- not charged when the runner spawned but was never admitted, and when
the provider did not accept `turn.start`;
- not charged on the first restart when the original attempt already
made progress;
- a normal retry that spawned but was never admitted is not charged, and
earlier work still does not count for it.
- Counter-cases, green on master and with the change: an accepted
`turn.accepted` or `turn.started` with no progress is charged; the
generation cap blocks at the last attempt; crash loops with and without
progress stay bounded; the #19720 and #19747 cases still pass.
- `execution-recovery-attempt.test.ts`: new lane tests (red on master).
- `workspace-recovery-preparation-dispatch.test.ts` (25 passed),
`heartbeat-process-recovery.test.ts` (interrupted-run cases),
`run-dispatch/adapters/postgres.test.ts` (interrupted cases).
- `server` typecheck (`scripts/typecheck-layers.mjs`, low-memory mode):
no errors.
- Not run: chaos waves (the coordinator schedules them on this host),
and the full server suite (CI covers it).

## Risks

- Behavior change: the first crash restart no longer charges when no
accepted turn is recorded. If a crash lands before the controller
projects the provider's `turn.accepted`, that attempt is not charged.
This fails toward more retries, and the generation-12 cap bounds it.
- A legacy preparation crash loop now gets up to 12 retries instead of
2. Each retry still passes the normal issue gates and keeps the
transient delay.
- The new queries use the `(run_id, seq)` index, once per restart claim.
Nothing new runs before `turn.start`.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with
tool use (shell, file edits, test execution). Extended reasoning
enabled.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 21:20:05 -06:00
DottaandClaude Opus 5.5 c6e4ed1547 feat(recovery): settle a claimed wake whose run finished without settling it (#19934)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - A wake request is claimed by the run that handles it, and that run
marks it finished.
> - In a K4 chaos wave (#19927), native restart recovery blocked a run
and ended it, but left its assignment wake `claimed`. Nothing ever
released it.
> - The durable-ownership plan settles such records on one shared path,
by proof, never by age.
> - This pull request registers a settle for `wake_request_claimed`. It
is Phase 2's second kind and is stacked on the accepted-result lease PR.
> - The benefit is that no run-ending path can strand a claimed wake.

## Linked Issues or Issue Description

Refs #19831 (plan), #19861 (registry), #19927 (the data that found
this). Stacked on #19933 (it adds the `settle` hook).

**What happened?**
Run `7c45860b…` failed with `native_restart_recovery_blocked`
(`execution_recovery_budget_exhausted`) at 23:19:41. Its wake
`6b3c4cce…` stayed `claimed` until the end of the wave (23:44 and
later). Rule I2 flagged it.

**What did you expect?**
A claimed wake ends when its run ends, with the run's outcome.

**Steps to reproduce**
1. `node cli/node_modules/tsx/dist/cli.mjs tests/restart-chaos/main.ts
--env local --faults K4 --k4-hold-max-seconds 600 --tasks 6
--concurrency 3 --seed 9203 --keep`
2. Look for `agent_wakeup_requests` rows with status `claimed` whose run
is terminal.

## What Changed

- New `recovery/wake-request-claimed-settlement.ts`: when the owner run
is terminal, and for a native run its coordinator is `committed` or
`terminal_failure`, the claim gets the run's outcome. That is
`completed` for a succeeded run and otherwise the run's status, as run
completion and native terminal projection already do. It is
compare-and-swap on the claim (id, run, status `claimed`).
- `ownership-registry.ts`: `wake_request_claimed` registers that settle.
- `native-finalization-reconciler.ts`: the pass log line includes the
settled count per kind.

## Verification

- `cd server && npx vitest run
src/__tests__/ownership-reconciliation-report.test.ts`: 17 pass,
including the new case. It covers a blocked native run, a native run
whose projection is still pending (kept), a succeeded legacy run, a live
run (kept), and a read-only pass (no change).
- Red/green (test written after the code): the new test fails on master
and passes here.
- Server typecheck passes.

## Risks

- No persisted shape changes, so there is no previous-release story
beyond this: claims saved by an older release are settled the same way.
- Race with the run's own settle: it waits for a native coordinator to
be final. For a legacy run, both write the same status, so the race is
idempotent.
- No change adds work before `turn.start`.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, in Claude Code with
tool use (shell, file edits).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [ ] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 21:18:22 -06:00
DottaandClaude Opus 5.5 83dec71a8f fix(runner): return the edited agent's link and effect in instruction save receipts (#19940)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - In chat, a person can ask the CEO agent to change another agent's
saved instructions
> - The native instruction tools save the change, but their receipts
contain no link to the edited agent
> - Completion feedback tells the agent to use only hrefs that tools
returned and not to guess routes
> - So the agent can not link the agent it changed, and it has no
grounded fact about when the change applies
> - This pull request adds the edited agent's real profile href and the
save's effect to the save and restore receipts
> - The benefit is a chat reply that lets the person open the changed
agent and know which runs use the new rule

## Linked Issues or Issue Description

Refs #19344

**What happened**
A person asked in chat: "Add a rule for Morgan to run the relevant tests
before handing work back." The agent saved the rule correctly and kept
concurrent human guidance. The reply did not link Morgan and did not say
when the rule applies. The run's tool events show the cause:
`update_agent_instructions` returned the revision but no href, and the
accepted `paperclip_finish` feedback said "Do not guess routes or invent
links when no resource href was returned."

**Expected behavior**
After an instruction save or restore, the agent has a real profile href
for the edited agent and a statement of when the saved instructions take
effect. The reply links the agent and explains that later runs use the
change.

**Steps to reproduce**
1. In a chat with the CEO agent, ask it to add a rule to another agent's
instructions.
2. Let the agent call `update_agent_instructions`.
3. Read the tool receipt. It contains no href for the edited agent and
no effect statement.

## What Changed

- `update_agent_instructions` and `restore_agent_instructions` receipts
now include `resourceLinks` with the edited agent's company-scoped
profile href (`/<prefix>/agents/<agentId>`) and name.
- The same receipts include `appliesTo`. It states that runs that start
after the save use the new instructions and that runs in progress keep
their snapshot. This matches `materializeInstructionBundle`, which reads
the committed head when it builds the run context.
- The link uses the agent id, which is unique. It does not use the
name-derived URL key.

## Verification

- `cd server && pnpm exec vitest run
src/services/native-runtime/agent-instruction-tools.integration.test.ts
src/services/native-runtime/agent-instruction-tools.test.ts`: 14 passed.
- Without the source change, the new assertions fail in 3 tests (update
receipt and both lost-acknowledgement recovery receipts).
- The recovery test confirms that the persisted receipt, which recovery
replays, also carries the link.
- The end-to-end chat eval `agents.edit-instructions` runs this change
on its case branch.

## Risks

- Low risk. The change adds fields to a tool receipt. Existing fields do
not change.
- Receipts that were saved before this change replay without the new
fields. That is acceptable: the agent then has no link, as before.

## Model Used

- Anthropic Claude Opus 5.5 (`claude-opus-5-5`), tool use and code
execution in Claude Code.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 21:11:18 -06:00
DottaandClaude Opus 5.5 196108acb9 fix(native): bootstrap again when a relaunched remote runner exited before provider work (#19951)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Restart recovery decides whether an interrupted native run can
resume, bootstrap again, or must wait for a person.
> - A remote run is blocked as "ambiguous" when recovery cannot prove
what reached the sandbox runner.
> - In a Daytona chaos wave (#19947), two runs were blocked even though
the controller had recorded that the relaunched runner exited before any
provider work.
> - This pull request accepts that recorded runner exit as proof and
bootstraps the run again, under the existing attempt budget.
> - The benefit is that a restart no longer turns a run with no provider
work into a failed, blocked run.

## Linked Issues or Issue Description

Refs #19947 (Daytona data), #19831 (durable-ownership plan), #19934 (the
stuck claimed wake from the same runs).

**What happened?**
Wave `w-20261108T012041-s9301`, runs `450f277d…` and `9b93d40c…`, went
through this sequence:
1. Restart recovery proved the remote bootstrap incomplete and
relaunched it.
2. The new runner exited: "runnerd exited while waiting for
run.prepare". The executor settled `bootstrap_retry` with
`providerSessionEstablished: false`, `providerEventsExist: false` and
`checkpointExists: false`.
3. The next restart recovery saw the recorded runner PID and blocked the
run as `ambiguous_remote_recovery_evidence`.

**What did you expect?**
Bootstrap again, because the runner is proven gone and no provider work
happened.

**Steps to reproduce**
1. `cd server && npx vitest run
src/services/native-runtime/native-runner-restart-recovery.integration.test.ts
-t "relaunched remote runner"` fails on master with `blocked /
ambiguous_remote_recovery_evidence`.

## What Changed

- `native-restart-recovery.ts`: new proof
`remoteRunnerExitedBeforeProviderWork`. It applies to a remote sandbox
with a prepared workspace and a settled `bootstrap_retry` failure whose
original code is `native_runner_process_exited`, with no provider
session, events or checkpoint and no lease or successor. Such a run is
classified as `bootstrap_incomplete`
(`remote_runner_exited_before_provider_work`). It passes the same retry
admission check as `remote_runner_never_launched`, and the same
three-attempt budget.
- Tests: the s9301-shaped retry plus five counter-cases.

## Verification

- `cd server && npx vitest run
src/services/native-runtime/native-runner-restart-recovery.integration.test.ts
-t "exited remote runner|relaunched remote runner|remote bootstrap
retry|never requested a runner|exact-checkpoint retry"`: 14 pass.
- Red/green: the new bootstrap test and the budget counter-case failed
on master (both returned `blocked / ambiguous_remote_recovery_evidence`,
the same as the s9301 rows) and pass here. The other four counter-cases
(not a runner exit, session established, provider events, checkpoint)
block on both.
- Loop: focused vitest with one embedded Postgres, 26–50 s.
- Not run locally: the server typecheck and the full suite (memory
limits on this host). Required CI covers them.

## Risks

- Fail-open risk: the proof needs the executor's own settled record of a
runner exit with no provider work, plus a fresh check that no checkpoint
or provider evidence exists. A recorded PID without the exit record
still blocks, as before.
- Previous-release story (rules/upgrade-safe-run-state.mdc): no
persisted shape changes. Rows without these failure fields keep today's
outcome.
- Nothing runs before `turn.start`. This is restart recovery only.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, in Claude Code with
tool use (shell, file edits).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [ ] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 21:08:35 -06:00
DottaandClaude Opus 5.5 38d8ef89ca fix(chat): link a person's own profile editor instead of attempting an agent write (#19943)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - People talk to their agents in chat. The chat guidance tells the
agent which links to give back.
> - A person can ask the agent to change their own display name. Only
the person can do this, in their profile settings.
> - The chat guidance did not say where that page is. The agent searched
the API and tried the human-only profile endpoint. The product correctly
refused it. The reply then gave only vague "profile/account settings"
directions.
> - This pull request tells chat where the personal profile editor is,
and that agent credentials cannot change a person's profile.
> - The benefit is a reply with a link that the person can open to make
the change.

## Linked Issues or Issue Description

**What happened**
In chat, a person wrote "Change my display name to Alex Chen." The agent
spent about four minutes on API searches. It tried `PATCH
/api/auth/profile`, and the product refused it. The reply told the
person to use their "profile/account settings" but gave no link.

**Expected behavior**
The agent does not try to change the person's profile. It links the
person's profile editor at
`/<prefix>/company/settings/instance/profile`, so the person can change
the name.

**Steps to reproduce**
1. Sign in as a person in an authenticated deployment.
2. Open chat with the CEO agent.
3. Send "Change my display name to Alex Chen."
4. See that the reply has no link to the profile editor.

## What Changed

- `server/src/services/agent-conversations.ts`: the chat directive now
says that a person's own name and avatar change only in their profile
settings at `/<prefix>/company/settings/instance/profile`. It says that
agent credentials cannot edit a person's profile, and that renaming an
agent, member record or company does not change it. The agent links that
page instead of trying the change.
- `server/src/__tests__/agent-conversations.test.ts`: a regression test
checks the directive and the built chat prompt.

## Verification

- `cd server && pnpm exec vitest run
src/__tests__/agent-conversations.test.ts -t "chat prompt policy"`: 10
passed.
- The chat eval case `navigation-preferences.edit-profile` checks this
end to end. It requires a link to the profile editor, and the person
follows that link to save the new name.

## Risks

- Low risk. This is a guidance change only. It adds no permission and
changes no route.
- Deployments that hide the Profile settings page get a link to a hidden
page. The page gate still applies.

## Model Used

- Anthropic Claude Opus 5.5 (`claude-opus-5-5`), with tool use and code
execution.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 21:03:35 -06:00
DottaandClaude Opus 5.5 47dc3dd9d0 fix(chat): ask which record is meant when a change matches several (#19942)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - People use the agent chat to change records, for example task
priority
> - A request can name one record when several accessible records match
it
> - The chat guidance tells the agent to ask focused questions, but it
does not say what to do when a reference matches several records
> - In an eval run, the agent spent more than two minutes. It considered
picking one task, changing both tasks, and asking. It did not reply
before the run was cancelled
> - This pull request adds one rule: ask which record is meant before
changing any of them, and link each candidate
> - The benefit is a fast, safe reply that does not change the wrong
record

## Linked Issues or Issue Description

**What happened**

The person wrote "Mark the landing-page task as high priority." Two
accessible tasks have the title "Landing page", in the projects Launch
and Experiments. Nothing in the chat selected one. The agent searched,
read both tasks, listed projects and searched the API. Its reasoning
wavered between "ask", "change both" and "pick one". After about 130
seconds it had not replied, and the run was cancelled.

**Expected behavior**

The agent asks which task the person means. The question links both
tasks, names what makes them different, and keeps the requested change.
The agent changes no task until the person answers. Then it changes only
the selected task.

**Steps to reproduce**

1. Create two tasks with the same title in two different projects.
2. In the agent chat, ask to set "the <title> task" to high priority.
3. See that the guidance gives no rule for several matches, and the
agent can deliberate, guess, or change both.

Refs: chat-feature eval `tasks.ambiguous-task`.

## What Changed

- `server/src/services/agent-conversations.ts`: `AGENT_CHAT_DIRECTIVE`
now says: when a change request matches several accessible records and
nothing selects one, ask which one before changing any. Link each
candidate, name the difference, and restate the change. Do not pick the
first match, change every match, or keep searching for a hidden answer.
- `server/src/__tests__/agent-conversations.test.ts`: a regression test
checks the rule in the directive and in the built chat prompt.

## Verification

- `cd server && npx vitest run src/__tests__/agent-conversations.test.ts
-t "chat prompt policy"` passes (10 tests).
- End-to-end: the chat-feature eval `tasks.ambiguous-task` runs with
this commit on an eval branch. The result is in a comment below.

## Risks

- Low risk. This is a prompt-guidance change only. No API, schema or
permission changes.
- The agent can ask in more cases. The rule applies only when several
records match and nothing in the conversation selects one.

## Model Used

- Anthropic Claude Opus 5.5 (`claude-opus-5-5`), tool use and code
execution in Claude Code.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
canary/v2026.1108.0-canary.4
2026-11-07 21:00:57 -06:00
DottaandClaude Opus 5.5 f5400e2594 feat(recovery): settle the accepted-result lease on the shared ownership path (#19933)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - A control-plane restart can kill the controller after an agent's
result is accepted. The result then stays leased to a dead process.
> - Today a private sweep (`native-dead-controller-result-lease.ts`,
#19713) proves that controller dead with its own liveness rules.
> - The durable-ownership plan (#19831) replaces private proofs with one
prover (`proveOwnerGone`, #19853) and one registry (#19861).
> - This pull request moves the accepted-result executor lease to that
shared path and deletes the private sweep. It is Phase 2's first kind.
> - The benefit is one tested rule for when a dead owner's result lease
is released, and the reconciler now repairs a lease that restart
recovery missed.

## Linked Issues or Issue Description

Refs #19831 (plan), #19853 (prover), #19861 (registry), #19713 (old
sweep), #19883 (legacy host fallback), #19927 (Phase 2 data).

**What happened?**
The accepted-result lease had its own liveness proof, separate from the
shared prover. The reconciler could only report a dead owner, not settle
it. When restart recovery missed a lease, it waited out the 20-minute
lease.

**What did you expect?**
One prover decides, and both restart recovery and the periodic
reconciler pass settle a lease whose controller is proven gone.

**Steps to reproduce**
1. Accept a native run result.
2. Kill the controller (SIGKILL) and start a new server.
3. If the restart sweep does not see the row, the result stays leased
until the lease expires.

## What Changed

- `ownership-registry.ts`: a kind may register `settle` and
`onUnprovable`. `native_accepted_result_lease` registers both. Other
kinds stay report-only.
- New `native-accepted-result-lease-settlement.ts`: a compare-and-swap
settle that expires exactly the proven owner's lease. It keeps the old
guards: the run must still be `running`, remote copyback stays fenced,
and a lease taken over since the proof is left alone.
- `ownership-invariant-report.ts`: the pass calls `settle` on `gone` and
`onUnprovable` on `unprovable`. A read-only pass (`record: false`) never
settles. New `settleOwnableKind()` for restart recovery.
- `heartbeat/recovery.ts`: restart recovery calls
`settleOwnableKind("native_accepted_result_lease")` instead of the old
sweep.
- Deleted `native-dead-controller-result-lease.ts`.
- `owner-proof.ts`: accepts a board attestation (`operator_attested`).
It also keeps the one-release local fallback for rows saved before their
PID space was recorded, on single-host servers only, and flags each use
so it is logged (`legacy_host_unknown_dead_pid_proof`, #19883). An
ephemeral server returns `unprovable` (`process_space_unrecorded`) and
the existing "confirm the previous server stopped" board action is
raised.

## Verification

- `cd server && npx vitest run
src/__tests__/heartbeat-native-restart-suspension.test.ts`: 27 pass, 7
of them new.
- `npx vitest run src/services/owner-proof.test.ts
src/__tests__/ownership-reconciliation-report.test.ts`: pass.
- Red/green (tests written after the code): 5 new behaviour tests fail
on master and pass here. They cover the ephemeral board action, the
reconciler-pass settle, the live-owner counter-case in that pass, the
legacy marker, and operator attestation. The stamped-dead-controller and
foreign-PID-space cases pass on both, as the old path behaved the same.
- Server typecheck passes (`npx tsc --noEmit -p server/tsconfig.json`).
- Not run locally: the full server suite (`pnpm verify` asks for broad
coverage because a file was deleted). Required CI covers it.

## Risks

- Previous-release story (rules/upgrade-safe-run-state.mdc): NRF rows
saved before #19868 have no `controller_host_hash`. They keep the same
one-release local proof as before on single-host servers, and each use
is logged. On ephemeral servers they stay unprovable and ask the board,
as before. Rows on another PID space keep their lease (the fence), as
before.
- Fail-open risk: settle is compare-and-swap on the lease token, boot,
PID, host hash and start time of the proven owner. An `unprovable` owner
is never released. Live-owner and foreign-space cases are tested.
- No change adds work before `turn.start`.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, in Claude Code with
tool use (shell, file edits).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [ ] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 20:58:04 -06:00
DottaandClaude Opus 5.5 18644a3263 feat(recovery): instrument 20 durable write boundaries with crash points (#19938)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - A control-plane restart between two durable writes leaves an
in-progress record owned by a dead process
> - #19937 added `crashPoint(name)` and a registry of 20 named
boundaries from the Phase 0 inventory
> - A name without a call site cannot fire, so the crash-point suite
cannot test it
> - This pull request puts one call at each registered boundary and adds
a test that keeps the registry and the call sites in step
> - The benefit is that the on-demand suite (next pull request) can kill
the control plane at every known write-ahead gap

## Linked Issues or Issue Description

Refs #19831 (plan, Phase 5). Refs #19846 (inventory, "Write-ahead
coverage"). Stacked on #19937 (helper and registry). Refs #19861
(ownable kind ids).

**Problem**
The registered crash points have no call sites.

**Expected behavior**
Each registered point is called at its gap: after the first durable
write or outside effect returns, before the next one starts. Disarmed
(always in production) each call is one comparison.

**Scope**
Call sites and a coverage test only. The suite runner and CI workflow
follow.

## What Changed

- Server call sites (`@paperclipai/shared/crash-points`):
- `sandbox-creation-operations.ts`: around the provider `create` call
(intent → provider → lease).
- `native-session-executor.ts`: after `native.process_start_requested`,
before spawn.
- `paperclip-control-plane-port.ts`: after the result-accept
transaction, before finalization starts (only when a result was
inserted).
- `native-run-finalizer.ts`: after `commitNativeStatusDecision`, before
the run projection.
- `workspace-operations.ts`: `workspace_finalize` only — after the
running row, and after `settle()` before the done row.
- `environment-runtime.ts`: provider release → lease row; teardown claim
→ destroy; reusable destroy → lease release; stop-and-retain claim →
stop.
- `heartbeat.ts`: lease release → runtime services; budget reservation
hold → dispatch.
- `heartbeat/queue.ts`: run claimed `running` → wake request `claimed`.
- `run-cost-accounting.ts`, `usage-receipts.ts`: accounting commit →
spool unlink; receipt spool → DB row → unlink.
- `packages/paperclip-runner/src/crash-point.ts`: a small copy of the
helper for controller code in this package, which does not depend on
`@paperclipai/shared` (adding that dependency would change the runner
content ID). It arms only `runner.*` names. runnerd never sees the
variable: its environment is an allowlist.
- Runner call sites: after the runnerd spawn, before its identity is
published (both spawn paths); `turn.start` result received → controller
journal saved → next send.
- `server/src/__tests__/crash-point-call-sites.test.ts`: every
registered point has a call site, every call names a registered point,
and every `kinds` entry is an ownable kind id of the Phase 1 registry.

## Verification

- `cd server && npx vitest run
src/__tests__/crash-point-call-sites.test.ts` → 3 passed.
- `pnpm --filter @paperclipai/server typecheck` → clean. `pnpm --filter
@paperclipai/paperclip-runner exec tsc --noEmit -p .` → clean.
- Behavior with nothing armed is unchanged: each call returns at its
first comparison (measured in #19937: about 3.7 ns).

## Risks

- Low risk. No call changes control flow unless `PAPERCLIP_CRASH_POINT`
names it and `NODE_ENV` is not `production`.
- Points on the path before `turn.start` (process start, runner spawn)
cost nanoseconds, within plan invariant 8.
- `usage-receipts.ts`: the persist-then-unlink one-liner became a block
with the same statements in the same order.
- The runner package change gives the runner a new content ID, as any
runner source change does. No persisted run state changes
(rules/upgrade-safe-run-state.mdc).

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with
tool use (shell, file edits) and a read-only exploration subagent that
mapped the boundaries.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 20:56:33 -06:00
DottaandClaude Opus 5.5 468f22ae4b fix(server): document the company export request body in the API catalog (#19945)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - A CEO agent can export the company setup through `POST
/api/companies/{companyId}/exports`
> - Agents find API operations and their request bodies in the OpenAPI
catalog
> - The catalog entries for `/exports` and `/exports/preview` have no
request body
> - The export defaults include only the company and agents, so an agent
that sends no body gets a package without projects or skills
> - This pull request registers the existing export body schema on both
entries and describes the `include` defaults
> - The benefit is that agents can request a complete reusable setup and
do not tell users that resources do not exist

## Linked Issues or Issue Description

**What happened**

A user asked a CEO agent in chat: "Export this company's setup so I can
reuse it." The company had an agent, a project, and a company skill. The
agent looked up `POST /api/companies/{companyId}/exports` in the API
catalog. Its reasoning said that the operation "has no request body
defined". It sent no body. The package had only the company and the
agent. The agent then told the user that the company had "no projects,
issues, or company skills, so nothing else was left out." That statement
was false.

**Expected behavior**

The catalog documents the export body, including `include.projects` and
`include.skills`. An agent can request a full setup export. The legacy
`/export` route already documents this body.

**Steps to reproduce**

1. Create a company with a project and a company skill.
2. Read `GET /api/openapi.json`,
`paths["/api/companies/{companyId}/exports"].post`.
3. See that it has no `requestBody`. The legacy `/export` entry has one.
4. Call `POST /exports` with no body. The package has no projects or
skills.

## What Changed

- Register `companyPortabilityExportSchema` as the request body of `POST
/api/companies/{companyId}/exports` and `/exports/preview` in
`server/src/routes/openapi.ts`.
- Add a description that states the `include` defaults and tells callers
to set `include.projects` and `include.skills` for a reusable setup.
- Add a regression test in
`server/src/__tests__/openapi-routes.test.ts`.

## Verification

- `cd server && pnpm exec vitest run
src/__tests__/openapi-routes.test.ts` passes (36 tests). The new test
fails on master because the entries have no `requestBody`.
- An end-to-end check runs the `companies.export-company` chat eval with
this commit cherry-picked onto the eval branch.

## Risks

- Low risk. This changes only API documentation. The routes already
parse this schema. Runtime behavior does not change.
- `imports/preview` and `imports/apply` also register no body. This PR
does not change them.

## Model Used

- Anthropic Claude Opus 5.5 (`claude-opus-5-5`), with tool use and code
execution in Claude Code.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 20:55:44 -06:00
DottaandClaude Opus 5.5 2a2d3f6e23 fix(ui): stop refetching the @task mention pool on every task event (#19931)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - The board UI keeps its caches fresh from live events in
`LiveUpdatesProvider`
> - Each task activity event invalidates the whole `["issues",
companyId]` query prefix
> - That prefix also holds the `@task` mention pool: the 100 most
recently updated tasks, about 315 KB per response
> - A chat turn emits many comment, status and run events, so an open
task page downloads that list again for almost every event
> - This pull request keeps the pool fresh from push events without a
refetch per event: a closed server flag marks real membership or title
changes, progress on pooled tasks reorders the cache in place, and other
progress refetches at most once per 30 seconds
> - The benefit is less bandwidth and CPU for users with an open task or
chat, and smaller eval traces

## Linked Issues or Issue Description

**What happened**
While a task chat page is open, the browser repeats `GET
/api/companies/:id/issues?limit=100&sortField=updated&sortDir=desc`
(about 315 KB each). One 10-minute chat-eval attempt recorded about 194
of these requests. The trigger is `invalidateActivityQueries` in
`ui/src/context/LiveUpdatesProvider.tsx`. For every `entityType:
"issue"` activity event, it invalidates
`queryKeys.issues.list(companyId)`. That prefix matches
`queryKeys.issues.mentionPool(companyId)`, which `IssueDetail` (and
`NewIssueDialog`) keep active for the `@task` picker. Invalidation
refetches active queries and ignores `staleTime`.

**Expected behavior**
Comments, run progress and status changes on any task do not download
the full mention pool again. The pool still updates when a task that the
picker can show is created, deleted or renamed.

**Steps to reproduce**
1. Run `pnpm dev` and create a company with about 140 tasks.
2. Open a task page, for example `/REF/issues/REF-1`.
3. Every 4 seconds for 15 rounds, post comments on the open task, on a
task in the top 100, and on a task outside the top 100, and change the
open task's priority (60 events).
4. Count requests to `issues?limit=100&sortField=updated`. Before this
change there are 15 (about 3.3 MB). After this change there are 2 (about
480 KB).

## What Changed

- New shared helper `issueActivityChangesTaskIdentity`
(`packages/shared/src/issue-activity-identity.ts`). It is true for a
created, deleted, hidden, unhidden or renamed task.
- `server/src/realtime/live-events-ws.ts`: task `activity.logged` events
now carry the closed boolean `taskIdentityChanged`. Authenticated
sockets still get no `details`; the flag carries no task content.
- `ui/src/context/LiveUpdatesProvider.tsx` refreshes the mention pool
this way:
- The task identity flag is true (or full details show a create, delete,
hide, unhide or rename): the pool refetches at once.
- Other events on a task already in the pool: the task moves to the
front of the cached list. There is no request. The freshness clock does
not change, and a pending invalidation is never overwritten.
- Other events on a task outside the pool: one trailing refetch at most
every 30 seconds, because the task can now be in the top 100.
  - The picker is closed: the pool is only marked stale.
- `ui/src/lib/query-invalidation-batcher.ts`: new `excludingQueryKeys()`
keyed exclusion predicate. The batcher coalesces it and uses it for
prefix coverage. The broad `["issues", companyId]` invalidation uses it
to skip the pool, so a burst is again one broad refresh per batch.
- Tests: `ui/src/context/LiveUpdatesProvider.mention-pool.test.ts`
(authenticated event shape, hide and unhide, the 30-second window,
reorder safety, a burst through the batcher), new batcher tests,
`packages/shared/src/issue-activity-identity.test.ts`, and socket
assertions in `server/src/__tests__/live-events-toast.test.ts`.

## Verification

- `cd ui && npx vitest run src/context/LiveUpdatesProvider
src/lib/query-invalidation-batcher`: 231 tests pass.
- `cd server && npx vitest run src/__tests__/live-events-toast.test.ts`:
11 tests pass. In authenticated mode the socket keeps `details` off and
sends `taskIdentityChanged` (false for routine updates, true for a
create, rename or hide).
- `cd packages/shared && npx vitest run
src/issue-activity-identity.test.ts`: 14 tests pass.
- The new UI tests fail against the first commit of this PR: the
authenticated burst, hide, unhide, the 30-second window and the batcher
burst.
- `tsc --noEmit` for ui, server and shared: no new errors.
- Browser measurement: a local `pnpm dev` instance (local trusted),
headless Chromium on a task page, 141 tasks, 60 events over about 63
seconds (the reproduction steps above):
  - Before (master UI): **15** mention-pool requests, about 3.3 MB.
  - After: **2** requests, about 480 KB (one per 30-second window).
- Freshness after the fix: one rename, hide, unhide or create each
caused **1** refetch. A priority change caused **0**.
- I did not run a browser session in authenticated mode. The
authenticated event shape is covered by the socket test and the UI unit
tests.

## Risks

- A task that moves into the top 100 can be missing from the `@task`
picker for up to 30 seconds.
- The cached order is approximate between refetches: a moved task goes
to the front, but its `updatedAt` value is not changed.
- Other queries under `["issues", companyId]` (descendants,
created-from, summaries, onboarding first task) still refresh for each
event batch. They are small, but they can get the same treatment later.

## Model Used

- Anthropic Claude Opus 5.5 (`claude-opus-5-5`), with tool use and code
execution in Claude Code.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 20:55:39 -06:00
DottaandClaude Opus 5.5 b4842df1e4 docs(plans): Phase 2 Daytona wave results (#19947)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Phase 2 of the durable-ownership plan moves in-progress record kinds
to one shared ownership path, guided by chaos data.
> - The first data doc (#19927) covered local waves only. Remote
runners, leases and sandboxes need a Daytona wave.
> - This pull request adds the results of one Daytona wave to the data
doc.
> - The benefit is that Phase 2 and Phase 3 prioritize remote kinds from
measured data.

## Linked Issues or Issue Description

Refs #19927 (data doc), #19934 (claimed-wake settle), #19863 (speed
budgets).

**What is the problem?**
The Phase 2 data doc had no remote data.

**Where is it documented?**
`doc/plans/2026-11-07-phase2-reconciler-data.md`.

**What should change?**
Add the Daytona wave's per-kind violations, settle latency, failures and
speed numbers.

## What Changed

- Added a "Daytona wave" section: 6 tasks with K1, K2 and two K4 outages
of about 575 s. 5 of 6 passed, and R6 was clean.
- Recorded the t03 failure: a Retry was cancelled by the company-wide
accounting gate (Phase 3 scope).
- Recorded the claimed-wake leak again (#19934 fixes it) and remote
settle times of 76–107 s.
- Corrected the earlier note about the image content-ID mismatch.

## Verification

- Wave `w-20261108T012041-s9301`; the numbers come from a copy of the
kept database and the read-only ownership sampler.
- This is a docs-only change.

## Risks

- Low. Docs only. The samples are small and the doc says so.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, in Claude Code with
tool use (shell, file edits).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [ ] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 20:37:38 -06:00
DottaandClaude Opus 5.5 4a8c8003fd feat(recovery): add the crashPoint helper and crash-point registry (#19937)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - A control-plane restart can land between two durable writes and
leave an in-progress record owned by a dead process
> - The restart-chaos campaign found these windows (20 ms–1 s) by luck,
with random kill timing
> - The durable ownership plan (Phase 5, "Testing: enumerate crash
points") asks for named crash points at each durable write boundary, so
a suite can kill the process at each one on purpose
> - Phases 2–4 run in parallel and need the helper early for their
per-kind tests
> - This pull request adds only the `crashPoint` helper and the registry
of named points
> - The benefit is one shared, zero-cost way to mark a boundary and to
arm it in a test

## Linked Issues or Issue Description

Refs #19831 (plan, "Testing: enumerate crash points", Phase 5). Refs
#19846 (Phase 0 inventory). Refs #19861 (Phase 1 registry; the
crash-point `kinds` use its kind ids).

**Problem**
No code marks the durable write boundaries. A test cannot stop the
control plane at a chosen boundary, so restart bugs are found only when
random chaos timing hits a window.

**Expected behavior**
A call `crashPoint("<name>")` at each boundary. In test mode an
environment variable makes the process SIGKILL itself at the nth hit of
one name. In production the call does nothing and costs nothing
measurable.

**Scope**
Helper and registry only. The call sites, the suite runner and the CI
workflow follow in separate pull requests.

## What Changed

- `packages/shared/src/crash-points.ts` (subpath export
`@paperclipai/shared/crash-points`, server-side only):
- `crashPoint(name)`. Disarmed, it is one comparison against a module
constant.
- `PAPERCLIP_CRASH_POINT=<name>[:<nth>]` arms one point when the module
loads. The nth hit appends a JSON receipt to
`PAPERCLIP_CRASH_POINT_RECEIPT` (optional), writes a `[crash-point]`
line to stderr, and sends SIGKILL to the process.
- `PAPERCLIP_CRASH_POINT_GATE=<file>` (optional): hits before the file
exists do not count, so setup work cannot fire the point.
- The variable is ignored when `NODE_ENV=production`. An unknown name
throws at import, so a typo cannot arm nothing.
- `armCrashPointForTest(spec)` throws `CrashPointReached` at the nth hit
instead, for in-process per-kind tests (Phases 2–4). It returns a disarm
function.
- `packages/shared/src/crash-point-registry.ts` (browser-safe data): 20
named points from the inventory's write-ahead table. Each has a
description, the environments that reach it (local, Daytona), the
ownable kind ids it affects, and the invariants (I1–I8) at risk. Names
follow `<subsystem>.<record>.<before|after>_<step>`.
- `packages/shared/src/crash-points.test.ts`: registry shape, spec
parsing, throw mode, real SIGKILL of a child process with a receipt, the
gate, production disarm, unknown-name refusal, and a disarmed-cost
check.

## Verification

- `cd packages/shared && npx vitest run src/crash-points.test.ts` → 11
passed.
- Disarmed cost on an M-series Mac: `crashPoint disarmed: 3.66 ns/call
(empty call 0.61 ns)`. A turn passes a handful of points, so the added
time before `turn.start` is in nanoseconds (plan invariant 8). The test
fails if the cost exceeds an empty call by more than 10 ns.
- `cd packages/shared && npx tsc --noEmit -p .` → clean.

## Risks

- Low risk. Nothing calls `crashPoint` yet, and nothing reads the
variable in production.
- An operator who sets `PAPERCLIP_CRASH_POINT` on a non-production
server makes it kill itself. The variable name and the `[crash-point]
armed` stderr line make this visible.
- No persisted run state changes (rules/upgrade-safe-run-state.mdc: no
previous-release story is needed).

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with
tool use (shell, file edits) and a read-only exploration subagent.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 20:37:32 -06:00
DottaandClaude Opus 5.5 f35eb1e5ef fix(observability): judge the TTFT budget from run creation; report the wait behind a live turn (#19941)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Invariant 8 of the durable-ownership plan says turns must start
fast. #19863 added per-run speed budgets that write
`run.performance.budget_exceeded` to the run log.
> - The Phase 2 chaos data (#19927) showed follow-up TTFT about 3x over
the claude budget.
> - The cause is measurement scope. A follow-up comment posted during a
live turn waits for that turn to end, and TTFT is anchored at the
comment. The budgets came from idle follow-ups.
> - This pull request judges the TTFT budget from run creation and
reports the wait separately.
> - The benefit is that budget breaches point at real start-up slowness,
not at time spent behind a turn the user is already watching.

## Linked Issues or Issue Description

Refs #19863 (speed budgets), #19927 (Phase 2 data), #19852 (startup
sub-spans), #19888 (warm default).

**What happened?**
In two local storm waves, C1 follow-up runs breached the claude warm
TTFT budget (p50 27.6–29.9 s against 9.5 s). Their spans show
`comment.to_run_created` at 6–62 s (waiting for the live turn), then
session resume at 1.4–3.8 s and submit-to-first-event at 2–5 s. Codex
without the wait was about 4.8 s, the same as the warm-follow-up
baseline.

**What did you expect?**
The budget should judge start-up latency, which is what its baseline
measured. The wait behind a live turn should be visible but not judged.

**Steps to reproduce**
1. Run a local chaos storm with C1 tasks.
2. Read `run.performance.budget_exceeded` rows with metric `ttft` for
`issue_commented` runs, and compare them with each run's
`comment.to_run_created` span.

## What Changed

- `native-run-trace.ts`: the TTFT budget check measures from run
creation (start of `heartbeat.queue`, or end of the ingress span). The
TTFT span itself does not change.
- `native-speed-budgets.ts`: breaches can carry `inputWaitMs` (TTFT
only).
- `tests/restart-chaos/ttft-baseline-stats.ts` and `ttft-baseline.ts`:
the wait behind a live turn is its own measured step (`inputWait`), next
to the full TTFT and the TTFT from run creation. The TTFT table gains a
"Wait behind live turn" column. The full comment-to-first-token time
stays the user-visible metric.
- `doc/run-log-events.md` and the plan's speed-budget section describe
the rule.

## Verification

- `cd server && npx vitest run
src/services/native-runtime/native-speed-budgets.test.ts
src/services/native-runtime/native-run-trace.test.ts`: 43 pass, 2 new.
`pnpm exec vitest run --config tests/restart-chaos/vitest.config.ts
tests/restart-chaos/ttft-baseline-stats.test.ts`: 12 pass, 1 new. They
cover a follow-up under budget after a 60 s wait (no breach), a
follow-up over budget (breach with `inputWaitMs`), and queueing after
run creation still judged.
- Server typecheck passes.

## Risks

- Low. This is a run-log-only change (AGENTS.md §5.7): no Telemetry and
no span attributes change.
- A slow wait before run creation is no longer a TTFT budget breach. The
TTFT span still records it, and the breach payload names it. Admission
holds after run creation are still judged.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, in Claude Code with
tool use (shell, file edits).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [ ] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 20:27:41 -06:00
DottaandClaude Opus 5.5 17b9e10252 docs(plans): Phase 2 reconciler data; let chaos K4 holds reach 600 s (#19927)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Control-plane restarts leave in-progress records that each subsystem
releases in its own way. The durable-ownership plan replaces those paths
with one shared path.
> - Phase 1 added a report-only reconciler. Its light local waves showed
zero violations, and that proves little.
> - Phase 2 moves kinds to the shared path. It needs data that shows
which kinds really leak, and the speed numbers to protect.
> - This pull request records that data from harsher waves. It also
fixes the harness so that K4 outages past the reconnect grace qualify.
> - The benefit is that Phase 2 moves kinds in order of measured risk,
against a known speed baseline.

## Linked Issues or Issue Description

Refs #19831 (durable-ownership plan), #19861 (report-only reconciler),
#19863 (speed budgets), #19797 (K4 hold cap).

**What is the problem?**
Phase 2 needs per-kind invariant data and speed data from harsh restart
waves. Only light local waves existed. In addition, a K4 hold over about
405 s always failed its fault receipt, so the 600 s cap from #19797
could not be used.

**Where is it documented?**
`doc/plans/2026-11-07-durable-ownership-and-reconciliation.md` (Phase 2
rows) and `tests/restart-chaos/README.md`.

**What should change?**
Record the data in a dated plan doc. Let chaos K4 holds run up to 600 s
and still qualify.

## What Changed

- Added `doc/plans/2026-11-07-phase2-reconciler-data.md`. It covers 5
unmasked local waves (two storms, a crash loop, two K4 runs). It gives
per-kind violation counts with example rows, owner verdicts, TTFT, boot
and restart recovery against the budgets, Phase 3 gate notes, and what
is not covered (Daytona).
- Added a short pointer to that doc in the durable-ownership plan.
- `tests/restart-chaos`: new flag `--k4-hold-max-seconds` (120–600). It
raises the upper end of the seeded K4 hold. The default range (120–300
s) does not change.
- `tests/runner-e2e/controller-outage.ts`: the receipt's ready bound is
now a parameter (`CONTROLLER_READY_BY_MS`, default 420 s). Runner suites
keep 420 s. The chaos supervisor passes hold + 420 s, so a hold past the
Runner's reconnect grace qualifies.

## Verification

- `pnpm exec vitest run --config tests/restart-chaos/vitest.config.ts`:
12 files, 135 tests pass, including the new flag test.
- `pnpm exec vitest run --config tests/runner-e2e/vitest.config.ts
tests/runner-e2e/controller-outage.test.ts`: 36 pass, including the new
long-hold receipt test.
- `node scripts/typecheck-test-projects.mjs tests/restart-chaos` and
`tests/runner-e2e`: pass.
- Live: the K4 wave at seed 9203 failed 3 of 6 tasks with the old bound
(fault error "did not produce a qualifying replacement receipt"). It
passed 6 of 6 with this fix, with holds of 294–579 s.

## Risks

- Low risk. The changes are test harness code and docs only. The runner
suites keep the 420 s ready bound by default.
- The data is local only. The doc says which kinds the waves do not
reach.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, in Claude Code with
tool use (shell, file edits). The model ran the chaos waves and wrote
the analysis and code.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [ ] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
canary/v2026.1108.0-canary.3
2026-11-07 19:55:02 -06:00
DottaandClaude Opus 5.5 d157ce223c fix(evals): keep large failed private evidence and the merged report within the private checks (#19932)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - The chat evaluation lane runs each chat case in a paid runner and
keeps the private evidence of each attempt in a bounded private archive
> - A failed attempt keeps its Playwright trace and video, and the
bundle has a 256 MB allowance
> - Playwright's HTML reporter copies each attachment into
`html-report/data/<sha1>.<ext>`, and the same bytes also stay in
`playwright-output/`
> - The bundle holds the original tree and the packaged tree, so a 30 MB
trace used about 125 MB of the allowance before the blob report copies
> - Large failed attempts went over the allowance, and then all of their
private evidence was lost
> - This pull request removes the `playwright-output/` copy only when
the HTML report holds the identical bytes
> - A second gap lost the whole merged campaign report of failed cells:
the report copied trace viewer font, SVG and manifest files to a place
where the trusted seal refuses them
> - This pull request stops that copy, and it names a refused report
carrier with a closed category
> - The benefit is that large failed attempts keep their evidence, the
merged report is kept, and the HTML report and its trace viewer still
open the trace

## Linked Issues or Issue Description

**What happened**
Failed chat evaluation attempts with large Playwright traces lost all of
their private evidence. The bundle went over the 256 MB private evidence
allowance. For example, the failed `tasks.organize-open-work` cell made
a 254 MB bundle. That bundle held the same 30.7 MB trace four times
(`playwright-output/.../trace.zip` and `html-report/data/<sha1>.zip`, in
both the original tree and the packaged tree), plus two blob report
copies. Larger traces went over the limit, and then the transfer refused
the whole bundle.

Also, the merged campaign report of a failed cell was refused with
`refusal: unsupported-packaged-evidence-carrier` (for example
`runs-adapters.inspect-failed-run`, run 42431162923). The cell's
evidence manifest lists its trace viewer files
`html-report/trace/codicon.*.ttf`, `playwright-logo.svg` and
`manifest.webmanifest`. `report.ts` copied them to
`normalized/evidence/<id>/attempt-1/html-report/trace/`. The
generated-report seal accepts trace viewer files only under
`html/trace/`, so it refused these three files and lost the whole
report. I reproduced this from the retained cell archive: a merge of its
blob report passes the seal rule, and the three normalized copies are
the only files that fail it.

**Expected behavior**
A failed attempt keeps its trace, and the trace uses as little of the
allowance as possible. The HTML report and the trace viewer still open
the trace for a person who downloads the bundle. The merged report of a
failed cell is kept. If the seal refuses a carrier, the refusal names
its category, not its path. No privacy, integrity or size check changes.

**Steps to reproduce**
1. Dispatch `runner-full-stack-e2e.yml` with `cadence=manual` for a
private chat case that fails with a large trace, for example
`chat-features.runner-opencode.local.tasks.organize-open-work`.
2. Download `manual-cell-<sha256(executionId)>.zip` from the private
history bucket.
3. List the archive. The trace bytes are in `playwright-output/` and in
`html-report/data/` in both `originals/` and `sealed-results/`.
4. For the report refusal: look at the "Retain complete manual merged
evidence only in restricted storage" step of the same run. It prints
`refusal: unsupported-packaged-evidence-carrier` and no
`manual-report.zip` is retained.

## What Changed

- Add `tests/runner-e2e/private-report-copies.ts` with
`dropDuplicatePlaywrightOutput`. It removes a `playwright-output/` file
only when `html-report/data/<sha1 of content><ext>` is a regular file
(not a symlink) with the same size and the same SHA-256. It writes the
removed paths, their kept paths and digests to
`snapshots/playwright-output-copies.json`.
- The function does nothing when the cell has a framework JSON report
(`framework-report.json` or `snapshots/playwright-framework.json`),
because that report registers `playwright-output/` attachments by path.
It also does nothing when `playwright-output`, `html-report` or
`html-report/data` is missing or is a symlink.
- Call it in the private manual branch of `tests/runner-e2e/launch.ts`,
before packaging and before both seals. Both evidence trees then keep
one HTML report copy of each trace and video.
- The HTML report, its trace viewer assets and the blob report do not
change.
- `tests/runner-e2e/report.ts` does not stage a cell file into
`normalized/evidence/` when its type is one the generated-report seal
refuses (the same `isStandardEvidenceFile("html-report/...")` rule). The
merged report has its own authenticated trace viewer under
`html/trace/`. The cell archive still keeps the files.
- `tests/runner-e2e/manual-private-transfer.ts` adds
`assertGeneratedReportCarriers`, which runs before the report seal. It
throws a fixed message per closed category (`font`, `svg`,
`webmanifest`, `image`, `source map`, `no extension`, `other`, `trace
viewer asset`, `trace viewer bytes`), so the refusal line names, for
example, `unsupported-generated-report-carrier-font`. It never names a
path, and the seal stays the authority.
- No change to the target-checked trusted files
(`manual-private-handoff.ts`, `manual-private-retention.ts`,
`manual-private-report-assets.ts`), so candidate branches do not need an
update. No change to the limits or the secret scans.

## Verification

- `vitest run --config tests/runner-e2e/vitest.config.ts
tests/runner-e2e/private-report-copies.test.ts
tests/runner-e2e/manual-private-cell-report-assets.test.ts
tests/runner-e2e/private-framework-report.test.ts
tests/runner-e2e/manual-private-handoff.test.ts`: 79 passed.
- The new tests use a real failed Playwright run with the HTML, JUnit
and blob reporters and a real retained trace. They show these things:
- Only the duplicate `playwright-output/` files are removed. The HTML
report and blob report bytes do not change.
- The deduplicated cell passes `packageEvidence`,
`sealStandardOriginalEvidence`, `sealManualResultEvidence`, the trusted
`validateSealedOriginals` and `validateSealedInventory`, the strict
archive pack and unpack, and `stageSealedPrivateCell`.
  - A tampered or symlinked HTML report copy keeps the original file.
  - Framework JSON cells and symlinked data directories are not changed.
- `vitest run --config tests/runner-e2e/vitest.config.ts manual-private
private-report private-refusal private-framework generated-report
report`: 25 files, 311 passed.
- `generated-report-carriers.test.ts` shows each refused carrier gets
its closed category code, the code has no path, and the real seal
refuses the same tree. `report.test.ts` shows the font, SVG and manifest
are not staged and the other files are.
- A new test runs the real launcher private branch from `launch.ts`. It
shows that the sealed originals keep one trace copy, in
`html-report/data/`.
- Live run: I applied the commit to a branch from
`chat-eval/master-candidate` (`chat-eval/case-evidence-dedupe`) and
dispatched
`chat-features.runner-opencode.local.tasks.organize-open-work` (run
42432263920). I will add the bundle size result in a comment.

## Risks

- Low risk. The change runs only in the private manual evidence branch.
It removes a file only after a full content comparison with the kept
copy. If a check fails, the file stays.
- A person who wants the trace must open `html-report/data/<sha1>.zip`
(the HTML report links to it), not `playwright-output/<test>/trace.zip`.
The receipt in `snapshots/playwright-output-copies.json` names the new
location.
- `report.ts` and `manual-private-transfer.ts` run from the master
checkout in the report job, so the report fix takes effect only after
merge. The normalized per-cell HTML report copy no longer has the viewer
font, logo and manifest. The merged report under `html/` and the cell
archive keep a complete viewer.
- The blob report still has a compressed copy of the trace, and the
bundle still holds the original and the packaged tree. A trace over
about 60 MB can still go over the allowance. This change does not fix
that case.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- Anthropic Claude Opus 5.5 (`claude-opus-5-5`), run in Claude Code with
tool use (shell, file editing, GitHub CLI and AWS CLI).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
canary/v2026.1108.0-canary.2
2026-11-07 19:37:12 -06:00
DottaandClaude Opus 5.5 1de794cb80 fix(evals): name runtime-built evidence refusals by their fixed template (#19920)
## Thinking Path

- #19908 made a refused private evidence transfer print a closed refusal
code instead of one generic line.
- Its first real use printed `refusal: dynamic`: the trusted modules
build some refusals at runtime (secret-leak findings,
publication-boundary limits), and those were deliberately not named
because their text can carry paths or counts.
- The fixed part of each template is safe and is exactly what an
operator needs to know which check refused.

## Linked Issues or Issue Description

**What happened**

After #19908, a refused `runs-adapters.inspect-failed-run` attempt
(workflow run 42422571919) printed `Restricted manual evidence operation
failed (refusal: dynamic)`, so the reason was still unknown.

**Expected behavior**

A refused transfer still keeps message text private, but names which
check refused it with a closed code, so the attempt can be diagnosed.

**Steps to reproduce**

1. Dispatch `runner-full-stack-e2e.yml` manually for a chat cell whose
private evidence fails transfer validation.
2. Open the "Retain complete approved manual originals" step log: it
shows the single fixed failure line with no reason.

## What Changed

- `private-refusal-code.ts`: runtime-built refusals from the trusted
modules map to fixed template codes (`template-secret-leak`,
`template-publication-boundary-exceeded`,
`template-invalid-file-metadata`,
`template-history-expiration-unprovable`). Variable parts are never
printed.
- Tests: each template is named without its variable text, and a source
scan asserts every runtime-built `new Error` in the trusted modules maps
to a named code (not `dynamic`).

## Verification

- `pnpm exec vitest run --config tests/runner-e2e/vitest.config.ts
tests/runner-e2e/private-refusal-code.test.ts
tests/runner-e2e/manual-private-transfer.test.ts`: 20 passed.
- `npx tsc --noEmit -p tests/runner-e2e`: clean.

## Risks

- Template codes reveal which kind of check refused (for example that a
secret-shaped value was found), not where or what. That is the intended
operator signal; the finding itself stays private.

## Model Used

Anthropic Claude Opus 5.5 (`claude-opus-5-5`), via Claude Code, with
tool use (shell, file editing).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
canary/v2026.1108.0-canary.1
2026-11-07 18:41:39 -06:00
DottaandClaude Opus 5.5 2fb4837cca fix(chat): tell chat how to link execution runs and name their agents (#19889)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Chat lets a person ask an agent about work, such as the runs behind
a task
> - The chat guidance gives a link template for tasks only. It does not
give one for execution runs
> - The issue runs API returns `agentId` and the run `id`, but no agent
name and no link
> - So when a person asks "Show me the runs behind this website task",
the agent lists raw UUIDs. It does not link each run. It does not name
the agent that did the work
> - This pull request adds the registered run route to the chat link
guidance. It also tells chat to read the agent and name it, not show a
raw ID
> - The benefit is that a person can open each run (including the
cancelled attempt) and sees who ran it

## Linked Issues or Issue Description

**What happened?**
A chat agent was asked to show the runs behind a task that had a
cancelled attempt and a successful retry. It read `GET
/api/issues/{id}/runs` correctly, but its reply showed both runs as raw
UUIDs in code spans and named the agent as "`fe03dd15…`, the Website
Brief worker" instead of its name. It gave no run links.

**What did you expect?**
Each run links to its run detail page
(`/<prefix>/agents/<agentId>/runs/<runId>`), and the reply names the
agent that executed it.

**Steps to reproduce**
1. Create a task assigned to an agent, cancel its first run, and retry
it so a second run succeeds.
2. In chat, ask "Show me the runs behind this website task."
3. The reply lists run UUIDs without links and identifies the agent by
ID.

Refs #19614 (the chat catalog eval case `activity.find-runs` shows this
failure).

## What Changed

- `server/src/services/agent-conversations.ts`: the chat link guidance
now gives the run route `/<prefix>/agents/<agentId>/runs/<runId>` and
tells chat to read and name the agent instead of showing a raw ID.
- `server/src/__tests__/agent-conversations.test.ts`: a regression test
checks that the run template matches the registered UI route and reaches
the chat task prompt.

## Verification

- `cd server && npx vitest run src/__tests__/agent-conversations.test.ts
-t "chat prompt policy"`: 7 passed. The new test fails without the
guidance change.
- `src/services/heartbeat/task-markdown.test.ts` passes.
- The embedded-Postgres suite in `agent-conversations.test.ts` did not
start in my local sandbox (Postgres init error). It does not depend on
this prompt text. CI runs it.
- End-to-end: the chat catalog case `activity.find-runs` is rerun with
this commit on its eval branch.

## Risks

- Low risk. This is prompt guidance text only. No API, schema, or UI
change.
- It conflicts textually with #17985, which edits the same guidance
line. The merge is simple: keep both sentences.

## Model Used

- Anthropic Claude Opus 5.5 (`claude-opus-5-5`), used through Claude
Code with tool use (shell, file edits). Default reasoning mode.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [ ] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 18:41:35 -06:00
DottaandClaude Opus 5.5 7fd98682ca fix(workspaces): give every subtask its own execution workspace (#19860)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Agents split work into child tasks, and each task runs in an
execution workspace (a checkout, branch, or sandbox folder)
> - Since early 2026, a new child task used its parent's realized
workspace by default: the same checkout, branch and sandbox
> - A parent and its child often run at the same time. Two writers in
one folder lose each other's files, the waking parent is cancelled with
`workspace_busy`, and sandbox lease ownership crosses from the parent
into the child, so retained-file recovery refuses the workspace as
ambiguous
> - The product rule is simple: a subtask gets its own workspace,
independent of the parent's saved files. Paperclip never needs to carry
a parent's unmerged changes into a child
> - This pull request makes that the only behaviour on every creation
path, and moves existing shared children to their own workspace on their
next run, with no user or admin action
> - The benefit is that parents and children never block or overwrite
each other, and recovery ownership stays with one task

## Linked Issues or Issue Description

**What happened?**
A child task inherited its parent's realized execution workspace by
default (`createChild` defaulted to `executionWorkspaceInheritanceMode:
"linkage"`, and `issueService.create` fell back from
`inheritExecutionWorkspaceFromIssueId` to `parentId`). When the parent
woke while the child wrote to the shared workspace, the parent run was
cancelled with `workspace_busy`. In sandbox environments, the lease
ownership chain crossed from the parent into the child, and
retained-file recovery refused the workspace with
`allocation_ownership_ambiguous`.

**Expected behavior**
Every new child task gets its own execution workspace, realized from the
project base exactly as a top-level task in that project. It never uses
the parent's checkout, branch, saved snapshot or unmerged changes. A
parent and its descendant never share a workspace by any route.

**Steps to reproduce**
1. Run a parent task in a project with isolated (git worktree) or
sandbox workspaces, so the parent has a realized execution workspace.
2. From the parent run, create a child task with only `parentId` (or
through the runner `create_task` tool, chat suggestions, decision
effects, plugins, or the New sub-task dialog).
3. See that the child's `executionWorkspaceId` is the parent's, with
`executionWorkspacePreference: "reuse_existing"`.
4. Wake the parent while the child runs in a sandbox environment. The
parent run is cancelled with `workspace_busy`.

**Additional context**
Refs #9233 (the existing `strategy_only` opt-out).
The opt-out `executionWorkspaceInheritanceMode: "strategy_only"` already
existed for accepted-plan decomposition. This change makes that
behaviour (tightened to drop a pinned existing branch) the only
behaviour.

## What Changed

- **One rule for every creation path
(`server/src/services/issues.ts`).** `issueService.create` still uses
the parent (or `inheritExecutionWorkspaceFromIssueId`) as a source for
the project, project workspace and workspace *strategy*, but it never
copies the source's `executionWorkspaceId`, `reuse_existing` preference,
or pinned existing branch. All server paths that create a task go
through `create()`/`createChild()`: issue routes (`POST /issues`, `POST
/issues/:id/children`, the run-bound default parent and run workspace
source), runner `create_task`, chat suggestion acceptance, native status
decisions, accepted-plan decomposition, decision effects, plugins
(`ctx.issues.create`), external agents, watchdog follow-ups, monitor
recovery issues, case handoffs and email channels.
- **Explicit ancestor workspaces are dropped.** If a create names an
`executionWorkspaceId` (or an `existing` workspace selection) that an
ancestor of the new task created or is bound to, `create()` drops it and
keeps only the strategy. Older clients and skills that copied the
parent's id keep working and get an independent workspace.
- **`createChild` no longer has a "linkage" mode.**
`executionWorkspaceInheritanceMode` is still accepted from internal
callers and is ignored.
- **`inheritExecutionWorkspaceFromIssueId` decision.** I kept the field
for API compatibility, but it now copies only the source issue's project
and workspace strategy. I removed its workspace-sharing behaviour for
every pair, not only parent/child: the source task and its follow-up can
run at the same time (the runner, watchdog and status-decision callers
all create the follow-up while the source run is live), so sharing would
again let two tasks write one folder. Explicit sharing between unrelated
tasks stays available through an explicit `existing` workspace
selection.
- **New `server/src/services/task-workspace-lineage.ts`.**
`buildIndependentTaskWorkspaceSettings` (strategy only: mode,
environment, runtime, network egress, shared-workspace concurrency, base
ref, branch template, commands; no `reuse_existing`, no
`operator_branch`, no `existingBranch`), `loadTaskLineageIssueIds` (the
parent chain plus, for a task that depth placement put beside its
requester, the requester's chain via `privacyParentIssueId`) and
`isAncestorExecutionWorkspace` (the workspace's `sourceIssueId` is in
that lineage, or a lineage issue is bound to it). A child in another
project does not take the parent's strategy.
- **Upgrade-safe rebind at admission.**
`executionWorkspaceService.releaseAncestorWorkspaceBindingAtAdmission`
runs at the same admission point as the pending workspace selection
(`heartbeat.ts`). For a child (or a flattened task beside its requester)
that an older release bound to an ancestor's workspace, it clears the
child's binding (keeps the project workspace and strategy, bumps the
binding revision) so the run realizes the child's own workspace. It does
nothing while another run of the child is running, while the child's
earlier run still owns workspace finalization or recovery, for native
restart/lease-owner recovery, for a process-loss retry, or for a Retry
that keeps the current workspace. The parent and its workspace are never
changed.
- **Projects without a project workspace (per-task repository
acquisition).** A parent with no project workspace worked in its own
task files, so its settings (for example `isolated_workspace`) do not
describe the project base. A child of such a parent, and an older child
released from one, takes the project's defaults exactly like a top-level
task, instead of an isolated mode that would resolve to a git worktree
with no git base ("needs a project / project workspace"). When the
child's new workspace is created at admission,
`executionWorkspaceRepositoryService.prepareForAdmission` repeats the
parent's (or requester's) repository requests as the child's own pending
requests (identity, URL, catalog id and requested ref only; no pinned
commit, branch or files). The normal acquisition path then clones a
fresh copy into the child's task files with the child's own access
checks. This runs only for a workspace created by that admission, so
existing tasks never gain repositories.
- **UI.** The New sub-task dialog no longer pre-selects the parent's
workspace. `buildSubIssueDefaults` drops `executionWorkspaceId` and
`reuse_existing`, and derives the parent's independent mode
(`shared_workspace`, `isolated_workspace` or `agent_default`) from its
preference, saved settings or current workspace. The "This sub-task will
no longer use the parent task workspace" warning is removed.
- **Contracts and docs.** Shared validator and plugin SDK comments
describe the new meaning of `inheritExecutionWorkspaceFromIssueId`.
Updated `doc/execution-semantics.md` (new rule in §6 and a wording fix
in the retained-sandbox paragraph), `doc/SPEC-implementation.md` (child
workspace rule, requester keeps *strategy* inheritance, watchdog
follow-ups), `doc/SPEC.md` (task workspace ownership),
`docs/specs/external-task-protocol.md`, `skills/paperclip/SKILL.md`
(step 9 and the workspace bullet),
`skills/paperclip/references/issue-workspaces.md`, the CEO onboarding
`HEARTBEAT.md`, and the plugin SDK README.

### Previous-release story (`rules/upgrade-safe-run-state.mdc`)

- **Migrated on next admission.** A child that the previous release
bound to its parent's (or any ancestor's) execution workspace keeps that
binding until its next normal admission. Then the server clears the
binding and the run realizes the child's own workspace from the project
base. No schema migration is needed. No user or admin action is needed.
- **In-flight writers finish first.** A running child is not
interrupted. Its current run, its native restart recovery (admitted
native input or lease owner), a process-loss retry, and a Retry that
keeps the current workspace all finish in the shared workspace. While a
child's earlier run is still running or its workspace finalization or
recovery is unsettled, the binding stays and a later admission releases
it.
- **No files are dropped.** The release changes only the child's binding
row. The parent keeps its binding, and the shared workspace row, folder,
branch and saved snapshots are not touched. Anything the child left
there stays in the parent's workspace.
- **No new refusal codes.** Saved run identity (native execution input,
leases, checkpoints) is not changed or refused; the rebind only affects
new admissions.

## Verification

- New `server/src/__tests__/subtask-workspace-independence.test.ts`
(embedded Postgres): `create` with `parentId`, `createChild` with no
mode / `"linkage"` / `"strategy_only"`,
`inheritExecutionWorkspaceFromIssueId` pointing at the parent, explicit
parent and grandparent `executionWorkspaceId`, a non-child follow-up,
and unchanged top-level defaults and explicit top-level reuse. 7
creation cases fail on `master` and pass with this change. Admission
cases: an old-release child is rebound while its parent is running and
the parent keeps its workspace; a running child is not rebound (deploy
lands mid-run); an unrelated explicit share is kept; the parent is never
rebound.
- New heartbeat case in
`server/src/__tests__/heartbeat-workspace-busy.test.ts`: an old-release
child bound to its running parent's workspace in a sandbox environment
runs to `succeeded` with no `workspace_busy`, gets a new workspace, and
the parent run and binding stay unchanged. It fails on `master` (the
child waits with `workspace_busy`).
- Updated tests that asserted the old inheritance in
`issues-service.test.ts`, `task-workspace-binding.test.ts`,
`chat-project-tools.test.ts`, `task-workspace-child-trust.test.ts`,
`heartbeat-git-restore-point-resume.test.ts` (a child bound to a closed
parent's expired workspace now starts from the project base and leaves
the parent's restore point alone), and
`ui/src/lib/subIssueDefaults.test.ts`. Remote-workspace reservation,
continuation and writer-wait suites now seed the older-release shared
shape directly (or an unrelated explicit share), so those safety paths
stay covered.
- `npx vitest run` on the changed suites and about 45 related server
suites (heartbeat workspace, recovery admission, issue routes, routines,
plugins), `ui` `subIssueDefaults` and `NewIssueDialog` tests, `pnpm
check:token-gates`, `pnpm -r typecheck`.

- New
`server/src/__tests__/heartbeat-subtask-acquired-repository.test.ts`: a
project with no project workspace, a parent whose task files hold an
acquired repository with an unmerged change, and a child (new, and the
older-release shape bound to the parent's workspace) that runs to
`succeeded` in its own task files with a fresh clone at the project base
and its own ready repository receipt. The parent's checkout keeps its
change. Both cases fail on the previous head with "needs a project /
project workspace".

## Risks

- **Project-level configuration still applies to children exactly as to
top-level tasks.** In a project configured for `shared_workspace`, every
task (top-level or child) uses the project's one folder under the
existing shared-workspace concurrency policy. A branch that the project
itself pins applies to every task in the project. This PR removes only
the parent-to-child carry-over of the realized workspace; it does not
change those project defaults.
- **Standalone follow-ups that an older release bound through
`inheritExecutionWorkspaceFromIssueId`** are migrated only when the
source is in their recorded lineage (parent or privacy parent). Others
keep their explicit share and the existing writer-wait serialization.

- **Behaviour change for agents that relied on a shared checkout.** A
child or follow-up no longer sees the parent's unpushed or uncommitted
changes. Agents must push or merge code they want a subtask to build on.
The skill and onboarding text now say this.
- **Explicit ancestor workspace ids are silently dropped** instead of
rejected, so older clients do not break. The task gets an independent
workspace.
- **First run of a migrated child starts from the project base.** If an
older child had uncommitted work in the parent's workspace, that work
stays in the parent's workspace and is not copied into the child's new
workspace.
- **Admission adds one indexed read** for tasks with a parent and a
bound workspace; the locking transaction and ancestor query run only
when the bound workspace was created by another issue.

## Model Used

- Claude Opus 5.5 (Anthropic), model ID `claude-opus-5-5`, used through
Claude Code with tool use (file edits, shell, test execution) and
extended reasoning.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 18:34:09 -06:00
DottaandClaude Opus 5.5 5f1b1bb81d fix(recovery): continue from the last save when a retained source cannot be verified (#19867)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - When a native run cannot save its files, a retained-file recovery
hold blocks the task until the worker saves them from the retained
sandbox.
> - The worker verifies the recorded source strictly. This includes the
reusable-lease chain of the sandbox.
> - A reusable sandbox chain can cross from a parent task into a child
task. The check then refuses the source with
`allocation_ownership_ambiguous` on every attempt.
> - Retry repeats the same refusal. The task stays blocked by three
gates: the saved-work wait, the repair flag and the remote writer hold.
The only text left tells a person to inspect the run and its
environment.
> - The source check must stay strict. Recovery must still work without
a person.
> - This pull request adds an automatic fallback: the task continues
from its last committed workspace save, the unverified files are
attached to the task but never applied, and the unverified workspace
epoch is abandoned so its root is never reused.
> - The benefit is that tasks with an unverifiable retained source
continue by themselves, with no lost saved work and no admin action.

## Linked Issues or Issue Description

Refs #19840 (removes the "inspect the run and its environment" text and
keeps Retry; this change removes the need for that Retry).

**What happened?**

A child task ran in a reusable sandbox that it inherited from its parent
task. The run saved a checkpoint, wrote more files, and then failed to
save them. Retained-file recovery refused the source with
`allocation_ownership_ambiguous`, because the lease history of the
sandbox crosses into the parent task. The hold was exhausted after one
attempt. Retry made a new generation that failed the same way. The task
stayed blocked with `saved_work_recovery_failed`,
`workspaceRepairRequired: true`, and the failed run still the dirty
writer of the workspace. A second task had a stale exhausted hold for a
run whose files a sibling recovery action had already saved. That hold
also kept the task from continuing.

**Expected behavior**

Recovery works without a person. When the source cannot be verified, the
task continues from its last saved version. The unverified files are not
applied, but they stay available. A stale hold whose files were already
saved settles as recovered.

**Steps to reproduce**

1. Use a native run with a remote workspace whose reusable sandbox lease
history includes a lease of another task.
2. Let the run save a checkpoint, write more files, and fail its final
save.
3. Let retained-file recovery run, or press Retry.
4. Before this change, the hold is exhausted with
`allocation_ownership_ambiguous` and the task stays blocked.

**Paperclip version or commit**

Observed on deployed builds that include `630411af53`. Holds saved by
the Nov 3–6 releases have this shape.

## What Changed

- New `server/src/services/workspace-recovery-fallback.ts`:
- `continueFromLastSavedWorkspace` runs when a hold is exhausted by a
permanent source refusal: `allocation_ownership_ambiguous`,
`source_binding_invalid`, `source_unavailable` or
`historical_source_missing` with retry class `service_required` or
`use_alternative_strategy`. It applies only to remote workspace sources
in the `prepared` state.
- Quarantine (secrets omitted under the workspace file policy: `.env`,
keys, repository metadata, dependency directories): if the retained root
is readable, the worker copies it with the existing read-only capture
(no write to the sandbox), converts it to a `.tar`, stores it, and
attaches it to the task as `unverified-files-run-<runId>.tar`. A
`workspace_recovery_quarantine` operation records it as `verified:
false, applied: false`. If the root is not readable, the worker records
a closed reason label.
- Stop proof: every allocation of the source run must carry a provider
stop receipt. A missing receipt is obtained through the same stop-only
cleanup as normal recovery (`prepareSandboxStopAndRetain` /
`prepareHistoricalSandboxStopVerification`,
`retryPendingSandboxTeardown`, `settleStopOnlyCleanup`). A sandbox that
another lease holds (`active` / `pending_cleanup`) is never read or
stopped from here; the hold waits.
- One transaction (lock order: task, coordinator, run, recovery action,
workspace) re-checks all facts including the stop receipts, abandons the
epoch, resolves the hold with the named outcome
`retained_source_unverifiable_continued_from_last_saved`, records an
`executionReconciliation` decision with `retainedSourceFallback`, and
denies native replacement. A Blocked task belongs to the hold only while
the hold's own `workspaceFinalizationBlock` receipt still owns that
status version, or, for receipt-less holds saved by older releases,
while the block was set by the run's terminal failure (within its
finalization window) and no status decision followed. Only then is the
task restored to `todo` and a continuation scheduled; a newer block is
kept and no continuation starts. The decision carries machine
`workspaceRepairEvidence`, which the reconciled admission requires for
runs with a restore failure.
- Continuation: with no waiting user input, the hold uses
`continuationDelivery: "pending"`, so the existing reconciled delivery
starts one continuation. Waiting user input continues the task itself
(`not_requested`), so there is never a second continuation.
- Agent note: the decision's `outcomeEvidence` (part of the
continuation's recovery outcomes) says that the run's unsaved changes
could not be verified and were not applied, where the attached copy is,
that the agent should check what to redo, and that completed external
actions must not be repeated.
- `settleSiblingRecoveredHold`: an exhausted hold whose run has a
verified repair receipt from a different recovery action settles as
recovered. It runs for every exhausted hold, including adoptable native
sources. A sibling marked recovered whose receipt no longer verifies
records a permanent deferral, so discovery does not reselect it.
- Deferral: when the fallback cannot settle yet, the hold records
`retainedSourceFallbackCheck` (reason, generation, count). Transient
reasons (live writer, running operation, missing stop, sandbox in use,
pending status effect, lock busy, storage failure) are checked again
after 5 minutes, at most 12 times. Permanent reasons (uncertain external
action, non-remote source) wait for new input, Retry or a new
generation. Storage or database failures after a successful read are
retryable and never recorded as "unreadable".
- New `server/src/services/workspace-recovery-fallback-discovery.ts`:
SQL for pending and due fallbacks. `retainedWorkspaceCandidates` (the
production worker's obligations sweep) and `nextWorkspaceRecoveryAt`
(its scheduler) include them, so the worker reaches old holds without
saved input.
- New `server/src/services/remote-workspace-epoch-abandonment.ts` (kept
out of `remote-workspaces.ts`, which is near 1,000 lines): authority
transition `abandonUnverifiedRemoteWorkspaceEpoch`. It clears the writer
and the dirty flag, keeps `snapshotId`, drops `location`, advances the
epoch, clears `providerRef` and the migration root, and records the
abandoned epoch. The next preparation restores the last save into a new
`<workspace>-<epoch>-<lease>` root.
- `server/src/services/workspace-recovery.ts`: hooks. An exhausted hold
first tries the sibling settlement, then the fallback (under the
existing workspace ownership lock). A fresh permanent refusal in an
attempt runs the fallback in the same pass, under the same ownership.
- `remote-workspace-transport.ts`: export the existing read-only
capture.
- `packages/shared`: optional `retainedSourceFallback` on
`ExecutionReconciliation`.
- `doc/execution-semantics.md`: document the fallback.
- No new polling or worker: the fallback runs inside the existing
retained-workspace recovery pass
(`rules/sleep-aware-background-work.mdc`).

Safety:

- The cross-task lease check (`retiredReusableLeasePredecessors`) is
unchanged and stays strict. Unverified files are never applied.
- No second executor: the source run, its controller and its finalizer
must be stopped. A live writer of the task or workspace, or a running
workspace operation, keeps the hold.
- No repeated external side effects: pending status effects,
non-completed or unknown API receipts, and uncertain tool invocations
keep the existing reconciliation path. The continuation keeps the
existing API receipt fences.
- Never overwrite another run's files: only the exact epoch that the
failed run wrote is abandoned, and the old root is never reused.
- Bounded and idempotent: a settled hold is never revisited. The
quarantine record is reused. A changed generation or revision leaves the
hold unchanged.

Previous-release story (`rules/upgrade-safe-run-state.mdc`): holds saved
by earlier releases carry forward. A hold saved by the Nov 3–6 releases
(`systemRecovery` exhausted with `allocation_ownership_ambiguous` /
`service_required`, board owner, old admin text) takes the fallback on
the next worker pass after deploy (restart sweep, Retry, or a new
message). No migration is needed. Refusals that do not qualify keep
today's behavior. The only new persisted shapes are additive:
`retainedSourceFallback` and `siblingWorkspaceRecovery` on the hold,
`remoteWorkspaceAbandonedEpochs` on the workspace, and a
`workspace_recovery_quarantine` operation. Earlier releases ignore them.

## Verification

- `cd server && npx vitest run
src/services/workspace-recovery-fallback.test.ts` — 15 tests:
- cross-task hold, saved by the previous release and refused fresh:
continues from the checkpoint snapshot, the quarantine `.tar` holds the
unverified file, the epoch is abandoned, `getExecutionBlocker` is
`null`, the task is `todo`, explicit continuation is not blocked by
`saved_work_recovery_failed` or `workspace_repair_required`, one
reconciled continuation is delivered, and the next writer restores into
a new root while the old root keeps its files;
  - unreadable root: continues and records the reason;
- idempotency: a second pass changes nothing and delivers no second
continuation;
  - waiting user input: no second continuation;
- negatives (live writer, pending side effect, uncertain external
action, sandbox held by another lease): the hold stays, the authority is
unchanged, nothing is attached or delivered, the deferral reason and
recheck time are recorded;
- an allocation without a stop receipt is stopped (stop-only) before the
hold settles;
- the production worker (`reconcileRetainedWorkspaces` with
`obligationsOnly`) and `nextWorkspaceRecoveryAt` discover and settle an
old hold with no saved input; a transient deferral is not revisited
until due, then settles;
- an old-release hold without a Blocked receipt keeps its status; a
current hold with the receipt is restored to `todo`;
- stale exhausted hold with a sibling-saved receipt settles as
recovered; one whose sibling receipt no longer verifies is recorded and
no longer discovered;
- a newer Blocked decision is kept and no continuation is delivered,
while the file hold settles;
  - the attached copy omits `.env` and key files.
- RED: with `workspace-recovery.ts` and `system-recovery.ts` reverted to
master, all tests fail.
- Regression suites pass: `workspace-recovery-warm-handoff`,
`workspace-recovery-retry-copyback`,
`workspace-recovery-preparation-gates`, `workspace-recovery-source`,
`task-retry`, `execution-blocker-read` (288 tests), and
`workspace-recovery-admission`, `workspace-recovery-preparation*`,
`remote-workspaces.integration`, `native-failed-workspace-recovery`,
`remote-workspace-transport`, `workspace-restore-repair-route` (683
tests).
- `server` typecheck passes.

## Risks

- A task now continues without the unverified changes of its failed run.
The agent receives a note and the attached copy, so it can redo or
re-apply the work. This replaces an indefinite block.
- Abandoning an epoch on a workspace shared with a parent task also
moves the parent to the last save. This is correct: the unverified
changes are not part of the saved lineage.
- Clearing the migration root means sessions bound to the old root start
fresh. The fallback continuation already forces a fresh session.
- The quarantine capture reads a sandbox that can be shared with another
task. It writes nothing there, and it verifies the copy against
inventories taken before and after.

## Model Used

- Provider: Anthropic. Model: Claude Opus 5.5 (`claude-opus-5-5`), with
tool use (shell, file edits, read-only browser for API inspection) in
Claude Code.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 18:34:05 -06:00
DottaandClaude Opus 5.5 feb8dacb86 fix(skills): teach the board skill how people find things in the web UI (#19891)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - People use chat with a board agent. The board agent reads the
`paperclip-board` skill.
> - People also ask the agent how to use the web UI. An example is "How
can I quickly find Launch tasks without leaving what I am doing?"
> - The skill does not describe the web UI search. The agent searched
for docs and found none. Then it said that it did not know the UI and
told the person to ask in chat.
> - The correct answer is quick search: Cmd+K or Ctrl+K opens the
command palette over the current page.
> - This pull request adds a short "Finding Things in the Web UI"
section to the board skill.
> - The benefit is that the agent gives the real entry point and
shortcut, and does not claim that it can operate the person's browser.

## Linked Issues or Issue Description

No issue exists. This is the problem description (bug template labels):

**What happened?**
A person asked the board chat agent how to quickly find Launch tasks
without leaving their page. The agent did not mention quick search or
Cmd/Ctrl+K. Its reasoning said that it did not know the exact UI
capabilities. It told the person to ask in chat.

**Steps to reproduce**
1. Open board chat in a company that has a "Launch" project.
2. Ask "How can I quickly find Launch tasks without leaving what I am
doing?"
3. Read the reply. It does not name the quick-search shortcut.

**Expected behavior**
The agent names quick search (Cmd+K on macOS, Ctrl+K on Windows/Linux,
or the sidebar search icon), operators such as `status:backlog`, and
"Search all" for full search. It tells the person to do these steps. It
does not claim to press keys for them.

Found by the chat-feature eval `navigation-preferences.quick-search`
(runner-opencode cell).

## What Changed

- `skills/paperclip-board/SKILL.md`: add a "Finding Things in the Web
UI" section. It describes the Cmd/Ctrl+K command palette, the sidebar
search icon, search operators, the "Search all" and Cmd/Ctrl+Enter
handoff to `/{prefix}/search`, and permission-scoped results. It tells
the agent that it cannot press keys or focus fields in the person's
browser.
- `skills/paperclip-board/SKILL.md`: add "help finding things in the
Paperclip web UI" to the skill description, so agents select the skill
for UI how-to questions.
- `server/src/__tests__/board-skill-ui-guidance.test.ts`: new test. It
checks that the documented shortcuts match the key bindings in
`ui/src/components/CommandPalette.tsx`, that the full-search route
exists, and that the description makes the section discoverable.

## Verification

- `pnpm exec vitest run
server/src/__tests__/board-skill-ui-guidance.test.ts
server/src/__tests__/cli-invocation-safety.test.ts
server/src/__tests__/agent-skills-routes.test.ts
server/src/__tests__/onboarding-seed-route.test.ts
server/src/__tests__/board-claim.test.ts
cli/src/__tests__/managed-agent.test.ts` passes.
- The new test fails on `master`, because the section does not exist
there.
- End-to-end: the change is cherry-picked onto the eval branch
`chat-eval/case-quick-search`, and the
`navigation-preferences.quick-search` chat eval runs on it.

## Risks

- Low risk. This is a documentation change to one skill and one new
test.
- If the palette shortcut or route changes, the new test fails. Then
update the skill and the test together.

## Model Used

- Anthropic Claude Opus 5.5 (`claude-opus-5-5`), used through Claude
Code with tool use (shell, file edits, GitHub CLI).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [ ] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 18:33:28 -06:00
Nicky Leach 35cbd15175 fix(native): recover a stopped Runner whose journal stayed ready at a settled cut (#19907) canary/v2026.1108.0-canary.0 2026-11-07 16:01:47 -08:00
Nicky Leach 94718ce168 fix(native): continue on a replacement when a retained Runner retires before claim (#19897) canary/v2026.1107.0-canary.24 2026-11-07 14:51:32 -08:00
Nicky Leach 91b044858c fix(runner): send the prepared task scope with retained release and resume (#19896) canary/v2026.1107.0-canary.23 2026-11-07 14:50:31 -08:00
Nicky Leach 5020f38f90 fix(runner): give a later attempt a new task when its stopped task kept no session (#19899) 2026-11-07 14:49:37 -08:00
Nicky Leach 0363ebec70 fix(connectors): stop GitHub access refreshes from advancing agent runtimes (#19902) 2026-11-07 14:43:39 -08:00
Dotta eb7c7b083a Recover Muse verification after contact, restart and access restoration (#19909)
## Thinking Path

> - Paperclip manages AI agents and their work under company access
rules.
> - Muse readiness uses a saved connection, receiver contact and an
authenticated challenge reply.
> - A failed challenge write could leave a saved contact with no later
recovery trigger.
> - A server restart or restored access must recover that contact under
current authority.
> - This pull request uses the existing delivery coordinator and saved
Muse state for recovery.
> - It keeps the normal receiver schedule, authorization checks and real
deadlines.
> - It lets eligible verification recover and lets idle verification
stop work.

## Linked Issues or Issue Description

**What happened?**

The first Muse receiver contact could persist while readiness challenge
creation failed. The contact then had no durable retry or startup
recovery path. Later membership, lifecycle or feature restoration could
also leave pending verification without a notice.

**Expected behavior**

Retry a temporary failure through the existing worker. Recover pending
contact after restart. Recheck the current company, agent, operator,
credential and binding generation before issuing a challenge. Stop
verification work while it is ineligible or complete. Do not revive
revoked credentials.

**Steps to reproduce**

1. Use the normal invitation and OAuth registration, PKCE and token
flow.
2. Send one receiver contact and let its normal persistence schedule
run.
3. Fail the first readiness challenge operation before it commits.
4. Observe whether the existing worker retries without another contact
or a manual Verify action.
5. Restart the App with a new database owner. Check that it creates one
usable challenge from the saved contact.

**Paperclip version or commit**

The causal baseline test used the unchanged production implementation at
`90148317b2a447794ff29a4acae5648ad11a9770` plus its normal fixture. The
accepted positive test used `9d383041028776ad8469ac4af3fe14ba6c369425`.
The initial published head was
`fe518c9b72504daf6374225987f24d45bc7bcf75`. The lease/auth correction
was locally qualified at `cfd515a207416097fe8b586277d70c4fd4a679fa`. The
current candidate is `6efe722e7eb1e22acd466125c7b4a627611d0273`; its
added Cloud actor fixture correction passed the full normal owning
program and all 35 tests. Its current normal build, lifecycle owner
controls, healthy-wait and restoration measurements are described below.
Earlier results below are bound to their stated revisions.

Related public changes: Refs #19819 for original-principal
authentication. Refs #19750 for the transaction-owned external feature
read. These are related foundations, not duplicate fixes. The current
Muse title and head-branch searches found no duplicate
contact-verification recovery PR. Related maintenance work is #17000 and
terminal assignment settlement is #17793.

## What Changed

- Add a typed, exact-binding verification notice through the existing
Muse delivery queue.
- Register the first-contact notice before its durable write in the same
transaction.
- Recover pending contact from saved state at startup. Retry temporary
failures through the existing scheduler.
- Recheck current feature, lifecycle, credential and access state after
commit. Park unavailable authority without recurring verification scans.
- Add narrowly scoped notices to the existing access, lifecycle,
configuration, company, budget and settings write owners.
- Save a healthy lifecycle verification wait in the existing operation
JSONB. Keep generic unresolved-work and error retries unchanged.
- Commit authenticated confirmation and its lifecycle recheck in one
transaction. Retain a raced recheck under the active lease, and recover
saved waits once at startup.
- Retain a committed lifecycle recheck while an expired attempt still
owns the row, so its late wait cannot park accepted confirmation.
Replacement claims keep their existing owner fence and fresh fact read.
- Keep the receiver gap, persistence and per-segment contact limits
unchanged.
- Add real App OAuth, failure, retry, restart, challenge and quiet
evidence. Add two normal-route restoration tests.
- Document recovery, reconnect requirements and the existing
connected-receiver sleep restriction.

## Verification

- Causal baseline: the real invitation and OAuth flow saved one contact.
The first challenge operation failed. The normal test failed because it
observed one verification attempt instead of a retry. No setup or
cleanup failure was counted as this regression.
- At `9d383041`: normal own Shared/SDK, DB with migration 0441 assets,
Runner TypeScript core and surfaces, module boundaries, and all seven
normal App programs passed. One new redundant role comparison first
failed typecheck; that diagnostic remains recorded and the corrected
full App gate passed.
- At `9d383041`: all 17 maintenance component tests passed with zero
skips. All original deadline, rollback, drain, terminal settlement and
startup controls remain.
- At `9d383041`: the one normal App case passed. Real OAuth authorized
one receiver signal. A retry occurred about 5.01 seconds after the first
failure. A new Db/App owner created one challenge, advanced revision 2
to 3, and accepted authenticated confirmation and mailbox ACK. Query
instrumentation had an active positive control. All measured query,
callback, session and verifier counters stayed equal across the
unchanged scheduled 15-second quiet window. Token revocation and
old-token/signal rejection passed.
- Known App, worker, HTTP and database owners closed without cleanup
errors. The tests used bounded local PostgreSQL and HTTP fixtures. They
did not call a live Muse model.
- Current integrated semantics: the full normal App driver completed all
programs. Only a new test callback had two undefined-value diagnostics.
An explicit defined-value guard corrected that test. The full 416-root
owning program then passed with empty diagnostics. A separate collector
incorrectly required an explicit child `noEmit` field; the normal
inherited setting was verified without repeating the compiler. The
original failures remain recorded.
- The first restoration run failed both cases. Permission parking
recorded 120 main-pool queries without more verifier calls. The
lifecycle counter recorded two denials without their exact scope. These
observations remain unexplained at the individual-query/call level.
Source separately shows a lifecycle readiness retry every two seconds
while the real external reply is absent.
- At `fe518c9b`: normal Shared/SDK and DB producers, module policy, all
seven full App programs, and all 33 pure diagnostic controls passed. The
lifecycle owner file passed all 19 cases, including both
confirmation/park orders, rollback, duplicate notices, startup recovery
and authority controls.
- At `fe518c9b`: the normal OAuth failure/retry/new-Db reconstruction
case passed. Its new healthy-wait window measured 15,002 ms with
unchanged total activity before genuine confirmation; the existing ready
quiet and revocation checks also passed.
- At `fe518c9b`: both normal restoration tests passed in Vitest.
Ordinary viewer-to-operator restoration and Pause/Resume recovered the
same binding, grant and single contact; each committed one challenge and
advanced revision 2 to 3. All six parked, restored and revoked/disabled
quiet windows measured at least 15 seconds with active positive read
controls and unchanged total queries, callbacks, sessions and verifier
calls. Both cleanups passed.
- The restoration wrapper still recorded failure: it required lifetime
lifecycle denial count zero, whereas the measured count was one before
the parked quiet window. The reviewed fixture explicitly permits a
current-authority denial from an earlier observation and requires no
committed challenge before restoration. Precise denial timing relative
to Pause was not serialized. The original wrapper failure is retained;
no rerun or retrospective explanation of the earlier failures is
claimed.
- Review exposed an expired-lease race. The added real-store baseline
test failed after the late defer restored `waitingForSignal`; no setup
or timeout was counted as the regression. On `cfd515a`, the whole
lifecycle owner file passed all 20 tests, including that case. The full
normal production declaration program (1067 roots), verification program
(662), and auth owning program (405) passed; all 1942 declarations
remained byte-identical.
- The original remote auth-session shard failed three tests because
their partial query adapters lacked the new binding query's
join/order/limit chain. A fixture-only correction preserved the real
notifier and existing authorization assertions. All 12 auth-session
tests passed locally.
- Complete remote inspection also found 33 failures in the 35-test Cloud
actor fixture with the same missing `innerJoin` method and downstream
incomplete-auth assertions. Its original full log and exact synthetic
Source comparison are retained. At `6efe722e`, the three-line fixture
adapter repair passed the complete normal 662-root test program and the
whole 35-test file with zero failures or skips. All existing lock,
authorization, settings, debounce and unfinished-auth assertions remain.
- The earlier healthy/restoration quiet measurements remain bound to
`fe518c9b`. Those steady 15-second windows did not exercise a
still-owned attempt passing its 120-second lease. The targeted
expired-owner regression qualifies that new boundary; it is not a fresh
measurement of the earlier windows.
- The initial `fe518c9b` remote gates failed the auth fixtures and
reported a Greptile 4/5 P1. The aggregate failure reported the
underlying shard. Those actual causes were fixed and qualified above.
- Current `6efe722e` remote gates completed with **57 successful checks
and three explicit skips**. The full latest edited Greptile summary is
**5/5**, explicitly reviews this exact head, and has no new finding. The
original P1 thread is resolved. All general, inline and nested review
pages were read.
- One current-head CI attempt timed out after 30 seconds in the Runner
evidence/privacy file, with 6,864 passes and one failure. That file and
its transitive inputs are byte-identical to the CI base. A separate
local diagnostic preserved every assertion and the original timeout, ran
the full normal Runner test project and the entire 41-case file, and
passed all 41 with zero skips. Its private bounded timing records
measured the target body at 74 ms. The diagnostic was then removed,
restoring the exact original test. This is local recovery evidence; the
original CI stalled await was not recorded and its cause remains
**unproven**.
- One retry of only the failed jobs on the unchanged head passed the
Runner support suite and dependent aggregate verification. The complete
second attempt and original failure logs are preserved. No test,
timeout, privacy guard or product code was weakened. This result does
not turn the original timeout into an explained failure or a diagnosed
flake.
- Full recursive typecheck, full `test:run` and a full release build
were not repeated locally. The normal full App programs, focused
producers and tests above passed, and the required current-head remote
gates passed. Final review is against the exact unchanged head; local
quiet remains separate from deployed suspension.

Reviewer commands use the normal project entry points: `node
server/scripts/typecheck-layers.mjs`, the whole
`server/src/services/muse-maintenance.test.ts` file, and both normal App
PostgreSQL files. PostgreSQL fixtures require explicit owned
fixture/admin URLs and normal migrations before imports. Run the files
serially with one worker. The private controller retains exact Source,
output, worker and owner-closure receipts.

## Risks

- Missing or early producer notices could lose a restoration trigger.
Notices stay in the transaction that commits the write. The worker
checks current authority after commit.
- A stale notice must not grant access. Binding generation, current
membership, company, agent and credential checks remain authoritative.
Revoked credentials require reconnecting.
- The change adds no table, migration, alternate task queue or periodic
verification scan. It adds two optional fields to existing lifecycle
operation JSONB. Generic pending/error deadlines, setup holds and manual
repair remain obligations.
- Confirmation can race with an active verification attempt. The park
compare-and-set must retain the durable recheck. Startup recovery uses a
fixed cutoff and keyset pages; it must not become another recurring
scan. Wrong company, stale version, pause and revoked credentials must
stay fenced.
- The connected receiver still has its documented tenant-sleep
restriction. Worker quiet is not proof of deployed suspension or
external wake.
- The normal challenge reply is sent by an authenticated protocol
fixture. Live Muse background replies, cost/usage, full Muse lifecycle
and full hosted Dot behavior remain unqualified. Partial Dot profile ACK
and unsigned-device cutover stay withheld.
- Restoration coverage for the additional company, budget, configuration
and feature producers remains a separate qualification obligation. This
pull request does not mark the whole hosted area complete.

## Model Used

OpenAI `gpt-6.1-sol` authored the implementation and tests with local
code and tool use. A GPT-6-based Codex coordinator reviewed the changes
and owns integration. Its exact underlying model ID is not exposed.
Context window sizes are unavailable. No context size is inferred.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge
2026-11-07 16:41:15 -06:00