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DottaandClaude Opus 5.5 edd00526e7 fix(native): park a response_wake with no admitted response instead of self-waking (#20935)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - A native agent run ends with a structured result. The status arbiter
turns that result into an issue status and next actions.
> - A result can report `yielded` with `continuation.kind:
"response_wake"`. This means "wake me when somebody responds".
> - Only a direct Board comment gave this kind a passive wait. Every
other `response_wake` became an immediate `issue_status_changed` wake to
the same agent.
> - The agent woke, saw nothing new, reported `response_wake` again, and
woke again. Nothing bounded this loop. It spent provider budget and its
back-to-back runs caused other failures on warm sandboxes.
> - This pull request parks such a result as a visible wait, and puts
declared continuation wakes under the rewake throttle as a backstop.
> - The benefit is that an agent that waits for input stops and costs
nothing until a real response arrives.

## Linked Issues or Issue Description

**What happened?**

Restart-chaos waves on master `683fd1e9a5` (no faults injected) showed
one task run 30 to 66 times, about 12 s apart. Example: wave
`w-20261111T190352-s5101`, task t02 (W2C), 65 runs in 13 minutes. Each
run reported `yielded` with `continuation.kind: "response_wake"` and the
summary "No changes made. This status-change wake does not trigger phase
2". Each run was woken by `issue_status_changed`, and each finalization
committed `live_continuation_registered` with an `enqueue_continuation`
effect of kind `response_wake`.

Root cause: `arbitrateNativeStatus()`
(`server/src/services/native-runtime/status-arbiter.ts`) only treats
`response_wake` as passive when `boardResponseWaitAuthorized` (from
`readNativeBoardResponseWaitSource`), external chat, or plan wait is
true. Otherwise it falls to the generic yielded branch, and
`status-decision-committer.ts` (`enqueue_continuation`) enqueues an
`issue_status_changed` wake to the same agent. `issue_status_changed` is
not in `THROTTLED_ISSUE_REWAKE_REASONS`, and the native committer writes
an `issue.updated` activity row with the run's id for every decision, so
the rewake throttle saw every native run as progress.

**Expected behavior**

A `response_wake` with no admitted response source parks the task. A
comment, an interaction answer or a status change by somebody else wakes
the agent. No path can loop without a bound.

**Steps to reproduce**

Run `tests/restart-chaos/main.ts --env local --adapters codex
--workloads W2,W2Q,W2C --concurrency 10 --tasks 10 --seed 5101
--lifecycle warm --triggers time`. W2/W2C tasks loop after phase 1.

## What Changed

- `status-arbiter.ts`: a `yielded` / `response_wake` result with no
admitted response source and no blocking remaining work now commits
`response_wake_waiting_for_input`, keeps the task `in_progress`, and has
no effects. Policy version is `phase6-v14`. Board, external chat, plan,
governance, dependency, pause and unfinished-work branches are unchanged
and still come first.
- `native-runtime/native-response-wake-wait.ts` (new) and
`recovery/service.ts`: recovery treats that applied decision as a
durable wait while it is the issue's latest decision, the issue is
`in_progress` with the same agent assignee, and no user comment arrived
after the run started. This applies to the stranded-work sweep and to
the paused-agent passive-wait check.
- `execution-projection.ts`: a committed run with this reason shows the
phase `waiting_for_answer`, label "Waiting for a reply", and a next
action that tells the user to comment or change the status. This shows
only while that decision is still the issue's latest decision and the
issue is `in_progress`; an older run shows "Completed".
- Backstop in `issue-rewake-throttle.ts` and `heartbeat/queue.ts`: an
`issue_status_changed` wake that carries a declared `continuationKind`
(the `enqueue_continuation` effect) is now a throttle candidate. The
native status committer's own `issue.updated` / status-decision activity
no longer counts as run progress or as new input. After two consecutive
successful runs with no issue-visible progress, such a wake waits for
the existing escalating cooldown (2 min, doubling, max 30 min). The
native status dispatcher (`dispatchNativeStatusWakeBatch`) does not drop
a throttled intent: it keeps the intent `queued`, reports the cooldown
deadline to the deferred-receipt worker, and dispatches it again when
the cooldown ends. Status wakes without a declared continuation (blocker
owner, notify owner, retry) are unchanged.
- Restart chaos: new enforced universal check U5 (`universal.ts`). A
task with more than 10 runs fails as `U5:run_budget_exceeded`
(`RESTART_CHAOS_U5_MAX_RUNS`). The README records the calibration.
- `doc/architecture/native-status-arbitration.md`: the decision table
and the wait rules.

## Verification

- RED on master (same reason as the waves):
`heartbeat-process-recovery.test.ts` "parks a native response_wake that
no response admitted…" fails with decision `reasonCode:
"live_continuation_registered"` and effect `{ kind:
"enqueue_continuation", continuationKind: "response_wake" }`.
`heartbeat-issue-rewake-throttle.test.ts` "throttles a
same_agent/response_wake/retry continuation…" fails 3/3 because the wake
is admitted.
- GREEN: the integration test finalizes the run, dispatches native
status wakes and runs the stranded-work sweep three times. It asserts
one run total, one wake request, no recovery action, the task
`in_progress`, and the projection "Waiting for a reply".
- `heartbeat-process-recovery.test.ts` "delays a no-progress native
continuation until the rewake cooldown…" finalizes a real `same_agent`
continuation after a no-progress run, dispatches twice (one throttle
receipt, intent stays `queued`, deadline equals `nextAllowedAt`), then
dispatches after the cooldown and gets the run. It fails when the
dispatcher drops the throttled intent.
- Focused suites pass: `heartbeat-process-recovery`,
`heartbeat-issue-rewake-throttle`, `status-arbiter`,
`native-status-arbiter-corpus`, `runtime-mode`, `execution-projection`,
`chat-run-milestone-work`, `heartbeat-dependency-scheduling`,
`heartbeat-run-summary` (904 tests), and all restart-chaos unit tests
(584 tests). `pnpm --filter @paperclipai/server typecheck` passes.
- Universal audit over the 17 saved waves of 2026-11-11: U5 flags 12
tasks, all looping tasks (12 to 66 runs), and 0 tasks on all-pass waves.
- Chaos rerun of local warm seed 5101 (W2, W2Q, W2C): result is added in
a comment on this PR.

## Risks

- Behavioral shift: a model that reports `response_wake` to mean
"continue now" no longer gets an immediate run. The task waits visibly
for a reply. The runner prompt already describes `response_wake` as a
real response wait, and `same_agent` stays available for server-owned
continuations.
- The throttle now applies to native runs. A chain of declared
continuations with no issue-visible output (no comment, document, work
product or other activity) waits for the cooldown after the second such
run. `same_agent` continuations are server-owned (repository
preparation), so this affects only repeated no-output chains.
- Old saved state: decisions committed under `phase6-v13` keep their
recorded effects. A run that finalizes after deploy uses the new policy.
No migration.
- Budget hard-stop behavior is unchanged.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with
tool use (shell, file edits, test runs).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-11 15:40:44 -06:00
DottaandClaude Fable 5.2 a56b648602 fix(upgrade-readiness): report restartable runs and a handoff verdict that blocks only on lost work (#20910)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - A deployer can replace the server while agent runs continue. Before
the swap, it reads the upgrade-readiness report of the old server
> - The version 1 report is ready only when every active run is
adoptable and no wake admission is in flight
> - On a busy instance, new runs arrive each minute. Some runs are
always in preparation, so the report is almost never ready and the
instance does not upgrade
> - A run in preparation has done no agent work. Restart recovery starts
it again. A swap loses nothing
> - This pull request adds a `handoff` object to the report. It
separates recoverable, restartable and blocking runs
> - The benefit is that a deployer can wait only for work that a swap
would lose

## Linked Issues or Issue Description

Refs #20852 (reference only; this change does not depend on it and does
not use its version 2 shape).

**What happened?**

A busy instance had 16 running runs and 1 queued run. Fourteen had a
live process. Two or three native runs had not launched a process yet.
One was a legacy run. `upgradeReadiness.ready` needs `blockingRuns === 0
&& pendingWakes === 0` in one probe. That state almost never occurs, so
the deployer never swaps the server.

**Expected behavior**

The report tells the deployer which runs a swap would lose. Runs that
only wait for a launch, and wake admissions in flight, do not block a
graceful replacement.

**Steps to reproduce**

1. Keep a steady flow of new runs on an instance.
2. Read `GET /api/instance/task-drain?upgradeReadiness=1` repeatedly.
3. See `ready: false` each time, because one or more runs are in
preparation or a wake admission is in flight.

## What Changed

- `summarizeUpgradeReadiness` returns an additive `handoff` object:
`version`, `ready`, `recoverableRuns`, `restartableRuns`,
`blockingRuns`, `pendingWakes`, `unsavedWakes`.
- `handoff.ready` is true when the instance is not draining, the census
is complete, and `handoff.blockingRuns` and `handoff.unsavedWakes` are
0. Saved pending wakes do not change it.
- The wake queue tracks each public wake admission until its wake
request and queued run commit. `unsavedWakes` is the count of admissions
before that commit. Without a valid count, every pending wake is
unsaved.
- The top-level version 1 fields keep their values and meaning. `ready`
and `blockingRuns` are unchanged, so a current consumer sees no looser
verdict.
- The census query marks a run `restartable` only with all of these:
`paperclip_runner` adapter; no process identity; no provider session
before or after; no checkpoint header; no dispatched runner task; no
execution-start event. It must also be a native run in the `observed`
phase with preparation fencing and an unsettled finalization record, or
a legacy run in the `preparing` stage under a recorded controller.
- All other runs without adoption evidence stay blocking. This includes
local adapters, legacy runs with a child process, follow-up runs that
carry a provider session, and runs the census could not observe.
- The OpenAPI description and `doc/testing-native-remote-continuity.md`
describe the new fields and their limits.

Why these classes are correct on master:

- Restartable native runs: restart recovery claims a run with no
checkpoint and no provider evidence as `bootstrap_incomplete` and
executes the same run again (`native-restart-recovery.ts`
`classifyNativeRunnerRecoveryEvidence`; `heartbeat/recovery.ts` executes
each claim). A graceful shutdown suspends the run and notifies recovery.
Existing tests: "recovers an unclaimed remote startup once without
requiring a provider checkpoint" and "recovers an unclaimed remote
startup that a graceful shutdown suspended during preparation".
- Restartable legacy runs: process-loss recovery retries a `preparing`
run with `providerWorkStarted: false`. Existing test: "continues a chain
whose preparations were killed twice and then interrupted again, without
a Retry".
- Pending wakes: the count is wake admissions in flight in the process,
not queue rows. A wake commits its wake request and its queued run in
one transaction. After the commit, the next server dispatches the queued
run at startup, so a saved wake does not block. Before the commit,
nothing is saved. Shutdown waits at most 30 seconds and then exits, so
an unsaved wake can be lost and blocks.

## Verification

- `cd server && npx vitest run
src/services/heartbeat/upgrade-readiness.test.ts
src/services/heartbeat/upgrade-readiness-post-result.test.ts`: 28
passed.
- Red/green: before the implementation, the 7 new tests failed (6
summary tests, 1 PostgreSQL census test). After it, all pass.
- Red/green for unsaved wakes: a test holds the agent row lock while a
wake admission waits. Without the fix, `handoff.ready` was true with no
saved wake. With the fix, it is false with `unsavedWakes: 1`, and the
wake saves after the lock releases.
- New cases: only recoverable runs; recoverable plus unlaunched runs
plus pending wakes (`handoff.ready` true, top-level `ready` false and
`blockingRuns` unchanged); a started run without recovery evidence; an
unobserved execution; draining; truncated census.
- The PostgreSQL test changes one fact at a time (process identity,
provider session, phase, fencing, checkpoint, adapter, each
execution-start event) and expects the run to become blocking.
- `cd server && npx vitest run src/__tests__/openapi-routes.test.ts
src/__tests__/instance-settings-routes.test.ts`: 157 passed (187 with
the two readiness files).
- `cd server && npx tsc --noEmit`: passed.
- `pnpm verify` exited 2 (a documentation path is a global CI input).
Required CI supplies the broad coverage.
- Not run: a live server replacement. The classification relies on the
existing recovery tests named above.

## Risks

- Low risk for current consumers. The change is additive and the version
1 fields are unchanged.
- `handoff.ready` is an observation at one instant. A wake admission
that starts after the probe is unsaved until it commits.
- Restart recovery applies its own proofs and a bounded attempt budget
before it starts a restartable run again. The report is an observation,
not a guarantee for each run.
- The probe adds one indexed `not exists` on run events per running row,
inside the existing two-second statement timeout.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- Anthropic Claude Fable 5.2 (`claude-fable-5-2`), with tool use and
code execution in Claude Code.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Fable 5.2 <noreply@anthropic.com>
2026-11-11 13:55:47 -06:00
DottaandClaude Opus 5.5 7e8901aa60 fix(recovery): let Retry and the person's answer continue a held task with a pending decision (#20872)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - A native run on a remote sandbox can lose its Runner process.
Recovery then saves the sandbox files and puts an execution hold on the
task
> - The hold offers Retry. A person can also continue the task with a
new message
> - Many held tasks also have a pending decision: the question that a
parked turn asked, or an older connection request
> - Continuation admission refuses every continuation while a decision
is pending ("decision_pending"). The answer to that decision is not a
message, so admission defers it behind the hold ("execution_recovery")
> - So Retry waits for the answer and the answer waits for the hold. The
task shows a Retry that does nothing, and nothing continues it
> - This pull request lets a person's Retry pass an open question, and
lets the person's own answer continue the task through the hold
> - The benefit is that a task with a lost Runner and a pending decision
always has a control that works

## Linked Issues or Issue Description

**What happened?**
On staging, the same-run retry of six remote native runs found the
Runner process gone (`process_not_running`, lifecycle `ready`). Each run
failed with `runner_remote_process_identity_unavailable`. Saved-work
recovery then recovered the sandbox files, and the task showed "Saved
work recovered. Retry or send a message to continue." with `canRetry:
true`. Four of these tasks also had a pending decision: the question
that the parked turn asked, or an older pending connection request. For
those tasks, Retry is deferred with `decision_pending`, and an answer to
the decision is deferred with `execution_recovery`. No control continues
the task.

**What did you expect to happen?**
Retry starts one new run. The person's answer to the pending decision
also continues the task.

**Steps to reproduce**
1. A remote native run asks the user a question and parks the turn.
2. The Runner process exits. The same-run retry fails with
`runner_remote_process_identity_unavailable`.
3. Saved-work recovery recovers the files. The task offers Retry.
4. Click Retry: the Retry waits with "A pending approval or question
must be resolved before this message can start."
5. Answer the question: the answer waits with "Waiting for execution
recovery. Your message is saved."

Refs #20838, #20853

## What Changed

- `admitExplicitNativeContinuation`
(`server/src/services/explicit-native-continuation.ts`): a task Retry is
no longer held by a plain pending question (`ask_user_questions`) or
connection request (`connection_intent`). Any interaction with approval
semantics still holds Retry: a plan review (`issue_document` target), a
governed tool action, a secret proposal, a connection authorization, and
other confirmations. A pending approval still holds every continuation.
A new message supersedes a plain question, as on master, and waits for a
decision with approval semantics.
- `admitExplicitNativeContinuation`: the person's own resolution of an
interaction (`mutation: "interaction"`, answered/accepted/rejected,
resolved by the same user) is explicit user input. It continues the held
task like a new message: a fresh session, the hold resolved as
`explicitUserContinuation` with the `interactionId`, and
`issue.execution_recovery_settled` activity. It never replays the failed
run. Governed tool-action confirmations are excluded. The existing
`readQueuedInteractionResponse` reads the answer.
- `heartbeat/queue.ts`: both admission calls pass the wake payload to
the admission.
- `buildExecutionContinuation`
(`server/src/services/execution-continuation.ts`): dispatch rechecks the
user authorization. It accepted an interaction receipt only through a
saved interrupt queue, so the answered successor failed with
`continuation_user_authorization_missing`. It now also accepts the
person's own answer: the interaction named by the durable authorization
was resolved by that user and not by an agent, and the authorization
names this successor run. The check does not depend on the run's current
trigger, so a later answer that replaces the trigger cannot invalidate
it.
- New API-level test
`server/src/services/governed-wait-runner-loss.test.ts` with the two
staging shapes (a parked question from the failed run; an older
connection request on a monitor wake). It checks that Retry starts
exactly one run and leaves the decision pending, that the person's
answer starts exactly one run and settles the hold, and that an answer
resolved by a different user keeps the hold.
- `doc/execution-semantics.md`: describes the rule.

## Verification

- `cd server && pnpm exec vitest run
src/services/governed-wait-runner-loss.test.ts`: 5 passed. The answer
tests now also build the successor's continuation as dispatch does and
check that the agent receives the answer.
- Red for dispatch (first head, ac17aebe): both answer tests fail with
`continuation_user_authorization_missing`.
- Ponytail follow-ups: a two-answer test (the second answer waits behind
the successor; dispatch also holds with a replaced trigger) and 'keeps
Retry on hold while %s is pending' for four approval-bearing kinds. On
head 60beb773, 5 of these fail. Two more tests show that a new message
supersedes a plain question and waits for a plan review (both unchanged
from master). All 12 tests in the file pass now. The PR adds no code
comments; the rationale is in `doc/execution-semantics.md` and here.
- Continuation suites (execution-continuation,
execution-continuation-provenance, legacy-continuation-authority,
explicit-native-continuation, task-retry, governed-wait-runner-loss):
634 passed.
- Red on master (product hunks removed, test kept): 4 of 5 fail. Retry
tests: `successors: 0`, deferred `decision_pending`. Answer tests:
`successors: 0`, deferred `execution_recovery`. Every case asserts
`runError: "runner_remote_process_identity_unavailable"`.
- Related suites: explicit-native-continuation, task-retry,
workspace-recovery-admission, retry-workspace-continuity,
workspace-recovery-retry-copyback, workspace-recovery-fallback,
native-workspace-reconstruction, native-recovery-preparation-failure,
issue-thread-interactions-service. 957 of 959 passed. The 2 failures are
30 s `afterEach` hook timeouts in native-workspace-reconstruction; all
51 of its tests pass alone, and the same file on unchanged master shows
5 hook timeouts on this machine.
- `cd server && pnpm exec tsc --noEmit -p tsconfig.json`: passes.

## Risks

- Medium. A Retry can now start while a plain question or connection
request is pending; decisions with approval semantics still hold it. The
new run sees the open decision in its task context, and the decision's
answer still wakes the agent later. Approvals keep holding Retry, so
approval gates are unchanged.
- An answer now continues a held task in a fresh session. All other
admission gates still run: stop proof, saved-work recovery, workspace
repair, active execution, pause, budget and ownership. Only the user who
resolved the interaction can continue this way.
- This does not make recovery automatic. A task whose Runner was lost
still rests on the hold until a person clicks Retry or answers.
Automatic settlement of a parked governed wait is a separate change.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), with tool use and code execution
in an agent harness.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-11 13:42:36 -06:00
DottaandClaude b93df4ca38 fix(chat): consume a saved chat wake whose message a completed run answered (#20689)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - External chat (for example GitHub review requests) wakes the
assigned agent with a saved chat message
> - When the agent is already running, the chat wake is saved behind
that run and released after it finishes
> - The running agent often reads the new message as part of its current
turn, so the message is already answered when the saved wake is released
> - The release kept that chat wake anyway, removed its now-delivered
message ids, and started a reviewed chat run with no message
> - A reviewed chat run with no message cannot be attested, so it failed
with `reviewed_chat_execution_binding_not_authorized` and the task
became blocked
> - This pull request treats a chat message wake like a comment wake:
when a completed run already received all its messages, the saved wake
is consumed
> - The benefit is that a message that arrives during an active run no
longer blocks the task after it was answered

## Linked Issues or Issue Description

**What happened?**
A GitHub chat message arrived for a task while the assigned agent's run
was active. The wake was saved behind that run. The run read the message
and answered it. When the run finished, the saved chat wake was still
promoted. Its message ids were removed because a completed run already
received them. The new run had source `chat:<provider>` and no message,
so reviewed chat attestation denied it with `context_mismatch`. The run
failed with `reviewed_chat_execution_binding_not_authorized`.
Review-path recovery inherited the same context and failed too, and the
task was blocked.

**Steps to reproduce**
1. Assign a task in review to an agent that is running.
2. Deliver an external chat message for the task. The wake is saved
behind the active run.
3. Let the active run receive the message as wake input and succeed.
4. Release the task's execution lock.
5. See that the saved chat wake is promoted with no message, instead of
being consumed.

**Expected behavior**
The saved chat wake is consumed with "Queued messages were already
delivered to a completed run". No new run starts. The chat does not get
a "not started" notice for a message that was answered.

**Paperclip version or commit**
`origin/master` at 6e524d8a69.

**Additional context**
This was seen on a staging deployment on five runs across three tasks in
one day. It is a message timing race, not a deploy or authorization
problem.

## What Changed

- `server/src/modules/wake-queue/adapters/postgres.ts`: a saved wake
whose reason is `External chat message received` and whose payload
mutation is `chat_message_received` is treated as message-only. If a
completed run already received all of its messages, the release consumes
it, the same as a comment wake. If any message is still unread, it is
promoted as before.
- `server/src/services/chat-inbound-wakeup-publications.ts`: a chat
receipt consumed for that reason does not publish "This follow-up was
not started". Other declines keep that notice.
- `server/src/services/queued-comment-delivery.ts`: constants for the
chat message wake reason and the delivered-message reason.
- New test
`server/src/modules/wake-queue/adapters/chat-wake-delivered.test.ts`.

## Verification

- `cd server && npx vitest run
src/modules/wake-queue/adapters/chat-wake-delivered.test.ts`
- RED on `origin/master`: the release promotes the consumed chat wake
("Unexpected promotion of a consumed chat wake"), and the receipt
resolves to a `not_started` notice.
- GREEN with this change: the wake is cancelled with the delivered
reason, no run starts, no "not started" notice, and a chat wake with an
unread message is still promoted.
- Related suites: `src/modules/wake-queue`,
`heartbeat-reviewed-chat-binding.integration.test.ts`,
`durable-chat-wakeup.test.ts`,
`heartbeat-native-status-context.test.ts`,
`external-chat-wait.integration.test.ts`,
`heartbeat-held-comment-wake.test.ts`.
- `npx tsc --noEmit -p server` passes.

## Risks

- A chat wake that merged with another kind of wake takes the merged
wake's reason and mutation. Only a wake whose current reason and
mutation are both the chat message values is treated as message-only, so
other merged intents keep promotion.
- A visible "Your follow-up is queued." notice is not followed by a "not
started" notice when the message was already answered. That matches the
existing behavior when the wake is promoted.
- Not changed: a separate case where messages from two different chat
conversations are merged into one saved wake. That case fails with
`binding_denied` and needs its own change.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, through Claude Code
with tool use (shell, file edit, read-only API access). Extended
reasoning was used.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude <noreply@anthropic.com>
2026-11-10 20:15:13 -06:00
DottaandPaperclip 5bad074baa feat: add individual agent interaction permissions (#20411)
Add eleven sparse incoming and outgoing restrictions, human CLI/API administration, shared mutation enforcement, and pending-delivery checks. Preserve existing defaults, agent settings, and existing authorization boundaries.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-11-09 20:34:04 -06:00
DottaandPaperclip b09f17fbfd fix(agents): repair queued setup through task connection cards (#20361)
## Thinking Path

> - Paperclip manages AI agents doing work for people.
> - Agent verification must finish before an accepted task can start.
> - A missing AI account default can prevent verification before a
provider starts.
> - Lifecycle policy treated that owned configuration refusal as a
temporary failure and retried each minute.
> - The accepted turn remained Queued without explaining the
prerequisite.
> - Park account configuration failures and reuse the task's existing
inline connection card.
> - Successful repair rechecks verification and releases the original
queued turn under its original authority.

## Linked Issues or Issue Description

**What happened?** An OpenCode agent selected the responsible user's
OpenRouter default, but that default did not exist. Verification retried
unchanged configuration indefinitely and its accepted task stayed
Queued.

**Expected behavior:** Preserve accepted work, explain the setup
prerequisite, and let the appropriate person repair it using the
existing task connection UI. Completion must verify the agent before
starting the same queued turn. Genuine pause, approval and access gates
remain effective.

**Reproduction:** Create an OpenCode Runner agent with a
responsible-user OpenRouter binding and no personal default; assign a
task while verification is pending. The base retries verification and
shows an unexplained queue.

Related: #18702 handles pending task connection recovery after account
repair. This PR handles the earlier agent-verification boundary. #20330
addresses a separate Codex governed-wait timeout and is already merged.

## What Changed

- Share owned account-selection failure evidence through a pure library
contract. Lifecycle policy parks those configuration failures with
fixed, redacted guidance; temporary infrastructure errors retain their
retries.
- Batch setup-state reads for unstarted queued turns. Distinguish manual
repair from automatic setup retries and preserve Stop, started/history
state and lifecycle holds.
- Reuse the existing `connection_intent` card, account selection and
completion APIs. Its controller-only `agentSetup` marker accepts only
never-started legacy turns; runtime tokens still require a running run.
- Address the card to the lifecycle verifier's account owner, preserving
the task's execution principal and private-task visibility. Attach
missing cards on admission, verification, startup and full recovery,
including retained retries and continuations. Repeated delivery and
publication remain bounded. A new queued turn supersedes the setup card
of a stopped turn; generic connection cards retain cross-run reuse.
- Recheck lifecycle verification after usable-account completion, then
release the existing turn through the normal readiness path. Preserve
decline, Stop, reassignment and changed setup-owner gates. Fence an
in-flight verification failure from overwriting a repair; add no
provider wake or recurring worker.
- Park owned account refusals during resume as well as initial
verification. Bind setup cards to the lifecycle operation, settle
obsolete deliveries, and keep explicit Retry guidance accurate.
- Reuse the router’s existing lifecycle pin for setup repair without
rerouting the task, advancing the pool cursor, or replacing its saved
binding. Legacy direct-account cards remain readable.
- Hide the incorrect Resume banner during setup, retaining genuine
manual/budget pause controls. Document the execution and retry contract.

## Verification

- Red: eight original behavior assertions failed on the base, including
the real selector's retry decision and the real batched queue
projection. Six owned selection cases failed classification.
Temporary-error presentation, different task/verifier users, retained
retry/continuation recovery and the setup Resume banner also have
failing-before/passing-after regressions.
- Green: 430 affected backend, lifecycle, shared-contract and UI tests
passed before the final review corrections. Subsequent focused runs
cover one inline card, real account selection/completion, duplicate
delivery/publication, verification before readiness, unchanged run
authority, private tasks, no extra provider wake,
decline/Stop/reassignment, company isolation, invalid runtime tokens,
transient retries and redacted diagnostics.
- Final setup/card and generic connection-service suites: 49 tests
passed. The stopped-turn case failed before the correction, then passed
with real account completion, the stopped source remaining cancelled,
and the replacement source remaining queued.
- After rebase, all 129 focused assertions passed. The local queue
suite’s 88 execution assertions passed repeatedly, but its
database-fixture teardown exceeded both 30-second and 120-second hooks.
An isolated queue case completed, and the setup/connection suites fully
passed. The original queue test and cleanup remain unchanged; broad CI
supplies the full-suite result.
- Server/UI typechecks, module boundaries, token gates and diff checks
passed. `pnpm verify --explain` requested broad CI because the
execution-contract document changed; no redundant full local suite was
substituted.
- Real source acceptance: macOS arm64, Node 26.4.0, isolated embedded
PostgreSQL and local board identity. Created an OpenCode/OpenRouter
agent and task through the API with no default. Admission retained one
unstarted turn and produced the existing inline Connect OpenRouter card.
The browser opened its credential form and closed it without entering
credentials. The same card/run persisted after server restart and
reload, with the setup label and no incorrect Resume. The browser also
reproduced Stop followed by a new queued turn retaining the stale card
on the prior head. On `12f609c98372fd1e50644028db75cfcc8deb210d`,
startup superseded the stale card and retained the same replacement
turn, with the original turn still cancelled and no provider execution.
- The earlier CI case-search failure also reproduces on exact base
`0e3fdebea8257bdff11573081c76b306f12db230` without this PR. Its repair
is now in master via #20371; this branch is rebased onto it and contains
no API-search changes.
- Staging's actual Runtime test returned “Connect an account and choose
your personal default” before provider startup. The original turn later
started independently on deployed code, then hit a separate
workspace-export failure. Automatic file recovery subsequently marked
that run successful; its task remains Blocked and the trial’s useful
output is unverified. This PR is not deployed; provider authentication
through its card and downstream publication remain unverified. No
account, credential, default, permission or binding was changed during
diagnosis.
- Previous revision review: Greptile 5/5 on
`12f609c98372fd1e50644028db75cfcc8deb210d`, with all four inline
findings addressed and resolved. [Full CI
passed](https://github.com/paperclipai/paperclip/actions/runs/42713494508)
on that revision: 59 successful checks, one neutral check and three
intentional skips, with no pending or failed checks.

- Latest revision `976bcae993805a8a2222395bbff9394f6791b424`: resume,
router and Retry-copy regressions failed before repair. Green: 92
lifecycle/setup/shared tests, 83 setup/generic-connection/router tests,
and 137 UI/shared tests. Server/UI typechecks, module boundaries and
token gates passed. [Full CI
passed](https://github.com/paperclipai/paperclip/actions/runs/42720731137)
on this exact revision: 59 successful checks and three intentional
skips, with no pending or failed checks. Greptile reviewed this head at
5/5; all six review findings are addressed and resolved. Real Stop/retry
acceptance retained the same replacement turn and current-operation card
through two actual server restarts, with no provider execution.

## Risks

- Known account configuration failures now require repair or explicit
Retry. Temporary failures keep automatic retries; accepted work and
authority remain intact.
- The projection adds one company-scoped batch read only for unstarted
queued turns. Card attachment examines at most 100 active candidates and
adds no timer, worker, schema or migration.
- The optional stored setup-card marker requires an aware reader during
rollback. No run/session/checkpoint identity format changes. Setup
presentation grants no access and cannot bypass verification or other
gates.

## Model Used

- OpenAI GPT-6 (Codex), with reasoning, tool use, code editing and test
execution. The exact serving model identifier and context-window size
are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-09 17:49:34 -06:00
DottaandPaperclip 3cc1032f6a fix: deliver saved answers to dependency-blocked tasks (#20363)
## Thinking Path

> - Paperclip lets people direct agent work through tasks and structured
answers.
> - Dependencies stop task execution until prerequisite work finishes.
> - A person must still be able to answer or redirect the assignee of a
blocked task.
> - Ordinary comments already get a bounded answer/triage turn. A saved
question response has no comment ID, so the same gates reject it.
> - Later dispatch also requires an active task and tries to check it
out. That conflicts with bounded interaction on a blocked task.
> - This pull request verifies the stored human response at each gate
and keeps the turn in bounded interaction mode.
> - The assignee can receive the answer without starting dependency work
or removing its blockers.

## Linked Issues or Issue Description

Refs #19923. That change covers dependency waits and comment retries.
This change covers stored interaction responses that have no comment ID.

**What happened?**

A parent task waits on a parked child. The assignee asked a setup
question. After a person answers, the response stays queued. Sending
that saved response is refused as `issue_dependencies_blocked`. Ordinary
new messages can reach the same assignee.

Passing admission alone is insufficient. The dispatch status check
rejects a blocked task, and automatic checkout then tries to start work
whose prerequisites are unfinished.

**Expected behavior**

Deliver the stored human answer or confirmation to its requesting
assignee as a bounded answer/triage turn. Keep the task blocked and keep
its dependency relationships. Preserve current-owner, pause, approval,
budget, recovery, and execution gates.

**Steps to reproduce**

1. Assign a parent task and make a backlog child block it.
2. Save a question on the parent and answer it as a person.
3. Dispatch its resolved-interaction wake, or send the saved answer from
the task queue.
4. Observe that the answer does not reach the provider while an ordinary
comment can run in answer/triage mode.

**Paperclip version or commit**

Reproduced on master at `653ab8b18f76`. This branch is rebased onto
master at `0e3fdebea8`.

## What Changed

- Verify the stored response by company, task, requesting agent, status,
kind, human resolver, and resolution time. A context flag alone is
insufficient.
- Allow a verified response through dependency admission and claim in
the existing bounded interaction mode.
- Recheck that response during scheduled retry promotion and final
provider dispatch.
- Keep bounded responses from checking out the blocked task or setting
it to `in_progress`, including when the last blocker finishes during
preparation.
- Preserve continuation classification through workspace and AI-account
resource waits, so the final response and owner checks still run.
- Correct the task-case API summary so the existing `case for task`
discovery regression passes on the first search page. This fixes a
pre-existing failure exposed by full CI, without changing search ranking
or assertions.
- Ignore obsolete Retry notices after newer conversation work, without
acknowledging saved input or changing execution authority.
- Document the response contract. Add real PostgreSQL and
assembled-heartbeat regressions.

## Verification

- Final commit `ba4b337cf1bb0236b7c0a742665b222ee894ff51`: [required CI
passed, attempt
2](https://github.com/paperclipai/paperclip/actions/runs/42706363120/attempts/2),
including typecheck, production build, server/chat tests, Runner checks,
and all 8 browser shards. PR status: 59 passing checks and 3 normal
skips.
- Red: answered questions and accepted/rejected confirmations return no
admitted run before the fix. All three new positive cases fail at the
dependency gate. A resource-wait retry also reproduces as refused before
its gate is fixed.
- Green: at delivery revision `9375a603e4`, focused heartbeat
integration and classification passed 14 tests; retry scheduling and
dispatch safety passed 241 tests. These use real PostgreSQL and
controlled adapter and resource-availability boundaries. The wider
initial dependency, native-continuation, and queue suites also passed
before the final refinements.
- Negative cases keep pending, missing, wrong-task, and agent-resolved
responses blocked. Changing the response proof immediately before
dispatch cancels the run without calling the provider. Policy controls
retain the current assignee, task status, and pending approval checks.
- Positive cases execute once, leave the parent blocked, preserve the
dependency edge, and leave the child in backlog with no child execution.
The same saved response survives a resource wait; removing its human
proof refuses promotion.
- The resource-wait provider-boundary and blocker-completion regressions
also failed before their fixes. All 14 focused integration and
classifier cases passed at delivery revision `9375a603e4`, including a
changed response during retry preparation.
- Red: a retained Retry for an older run makes a newer successful
conversation display as failed. Green: all 78 database-backed query and
interruption-presentation tests pass, including a later real failure and
independent queued input controls.
- Server layered typecheck and module-boundary checks passed at
`11992aad0c7fbaf13e7548d71ee633560bd8bb6f`, before the one-line API
summary correction. That CI passed build, typecheck and every browser
shard, but exposed the pre-existing case-search assertion and a
report-assets test timeout. Final-head CI passed as linked above.
- Fresh Greptile review is 5/5 on final commit
`ba4b337cf1bb0236b7c0a742665b222ee894ff51`, with no unresolved threads.
- The existing API discovery suite reproduced its first-page assertion
before the summary correction; all 3 cases pass afterward. The timed-out
report-assets privacy test passed locally in isolation and the full
support job passed on the final-head rerun. Runner shutdowns interrupted
the first attempt; affected jobs were rerun once without code changes. A
separate onboarding timeout also passed on that rerun.
- `pnpm verify --explain` requests broad CI because the execution
contract is a global input. The final CI run supplied that coverage.
- Separately recovered the reported staging conversation through an
ordinary message and the existing steering control. The agent
acknowledged the message and the saved-answer queue drained. The fresh
Notebook action subsequently succeeded. This was on the previously
deployed revision; it does not claim this code is deployed.

## Risks

- This changes admission and dispatch. Each gate checks the persisted
response; no caller-supplied marker grants the exception.
- The bounded turn does not check out the task, resolve a dependency, or
approve another action. Existing pause, ownership, budget, approval, and
stopped-execution controls still apply.
- Each additional lookup is one primary-key read and runs only for a
response on a dependency-blocked path. There is no new polling worker.
- No migration is required. Older queued contexts get the exception only
when their stored human response still verifies. No prior run or action
is replayed by this change.
- This PR does not roll out the code to staging.

## Model Used

OpenAI Codex, GPT-6 family, with repository tools, code execution, and
browser inspection. The runtime does not expose the exact model ID,
context-window limit, or reasoning-mode label; those values are not
asserted.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-09 16:27:34 -06:00
DottaandClaude Opus 5.5 93f7c3b5d3 fix(tasks): keep a budget-held Retry's failure visible and refresh the open task (#20338)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - When a task's automatic recovery stops, the person's Retry rechecks
the task's gates. If a gate refuses, for example a budget hard stop, the
Retry is saved and starts by itself once the gate allows it
> - After a person pressed Retry under a budget hold, the task page went
blank: no failure, no notice and no Retry. A person had no way to see
why nothing started
> - Two gaps caused it. The task notice drew only system-owned states,
and a budget hold presents as a person-owned state with no card of its
own. Also, admission saved the wait reason without publishing anything
that an open page listens to
> - This pull request keeps the failure visible and names the budget
wait, and it refreshes an open task when admission records why a Retry
waits
> - The benefit is that "failure remains visible if the new attempt
cannot start" holds without the person reloading the page
> - These two commits were pushed to #20306 after it was squash-merged,
so they are not on master

## Linked Issues or Issue Description

Refs #20306 (merged without these two commits) and #20270.

**What happened?**
In the chat eval
`chat-features.runner-opencode.local.recovery.retry-exhausted`, a person
pressed Retry on a task whose native recovery was exhausted while the
agent's budget was held. The Retry was accepted (`POST
/api/issues/{id}/retry` returned 202). The task page then stayed blank
for more than 60 seconds on the open page.

**Expected behavior**
The task keeps the failure visible and says that it is waiting for the
budget. Once the budget allows new work, the saved Retry starts once by
itself.

**Steps to reproduce**
1. Let a task's run fail, and put the assignee over a budget hard stop.
2. Open the task and press Retry.
3. The page shows nothing about the failure or the wait.

**Paperclip version or commit**
master at 76254ead22

## What Changed

- `ExecutionBlockerNotice.tsx`: a Retry held by a budget hard stop
presents as `waiting_for_user` with `userAction: "budget"`. The notice
now shows "Couldn't finish this attempt. Your message is saved. It is
waiting for the budget to allow new work. Raise the budget in Costs."
(`data-testid="task-execution-waiting"`). It shows no second Retry,
because the saved Retry starts by itself. Other person-owned decisions,
such as approvals and run-stopped confirmation, keep their own surfaces.
- `deferred-execution-wait.ts`: when the wait reason of a deferred
request changes, its task records an `issue.execution_waiting` activity.
Its live event refreshes an open task page. Callers inside a transaction
(`heartbeat/queue.ts`) pass their post-commit publication list, so the
event is published only after commit.

## Verification

- A probe on the real deferred-receipt fixture showed that a budget-held
Retry presents as `waiting_for_user` / `budget` / `canRetry: false` at 0
and 11 seconds. Before this change, the notice rendered nothing for that
state.
- `ExecutionBlockerNotice.test.tsx`: 18 tests pass. The budget-held
notice is covered, it offers no duplicate Retry, and approvals still
render nothing here.
- `deferred-execution-wait.test.ts` (new, embedded PostgreSQL):
- One live event is published for each new wait reason. The same reason
again publishes nothing.
  - Inside a caller's transaction, nothing is published before commit.
  - A request that is no longer deferred records nothing.
  - Two of these cases fail when the change is reverted.
- `deferred-execution-receipt-work.test.ts`: passes (49 tests together
with the new file).
- `pnpm check:token-gates`: clean.
- Paid live run: `recovery.retry-exhausted` on an eval branch that
includes both commits. The run ID will be added below.

## Risks

- Low. The new notice renders only for `waiting_for_user` with
`userAction: "budget"`, which rendered nothing before.
- The activity row is written only when a deferred request's wait reason
changes, so a gate that refuses repeatedly adds one row, not one row for
each evaluation.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with
tool use and code execution.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-09 13:52:49 -06:00
DottaandClaude Opus 5.5 d10c6e0e8b fix(chat): hold a chat message at the agent's daily limit instead of dropping it (#20292)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Agent Chat sends each person's message to the conversation agent
through a durable outbox (`deliverConversationComments`). The outbox
keys each wake receipt as `conversation-comment:<commentId>`.
> - The outbox treats any receipt with that key as delivered. Queue
admission writes a `skipped` receipt when the agent reached its daily
run or cost limit.
> - So a chat message sent after the agent used its daily allowance was
consumed silently. No run started, the chat showed nothing, and nothing
resumed it.
> - A person's message must never be silently dropped. The daily limit
is an operator control, so the message must wait honestly, not bypass
the limit.
> - This pull request makes the outbox hold the message at the daily
limit, like it already does for a paused agent, and resume it when the
limit resets.
> - The benefit is that a chat message at the daily limit is saved,
shown with its reason, and sent automatically at 00:00 UTC.

## Linked Issues or Issue Description

No public issue exists. Inline bug report:

**What happened**

In a chat eval, the conversation agent (CEO) had `maxDailyRuns: 3`.
After three chat turns and a separate failed-model phase on another
agent, the person sent a fourth message. The comment was saved (POST
201), but no CEO run started. The conversation stayed `active` with no
`executionRunId`. The ownership reconciler later reported
`I7_visible_next_action`. The server log shows no wake error. Queue
admission had written a `skipped` receipt (`heartbeat.daily_run_limit`)
under the outbox key, so the outbox counted the message as delivered.

**Expected behavior**

A chat message that reaches the agent's daily limit is not consumed. It
stays saved, the chat shows why it waits, and it is sent automatically
when the limit resets. The daily limit still applies: the message does
not start a run early.

**Steps to reproduce**

1. Set a conversation agent's `runtimeConfig.heartbeat.maxDailyRuns` to
N.
2. Send N chat messages and let each turn finish.
3. Send one more chat message.
4. See that no run starts, the chat shows no waiting state, and the
message is never answered (a `skipped` wake receipt with reason
`heartbeat.daily_run_limit` exists for `conversation-comment:<id>`).

## What Changed

- `server/src/services/agent-conversations.ts`: add
`conversationDeliveryHold`, which applies the same daily run/cost limit
check as queue admission. The outbox returns `deferred` at the limit and
writes no receipt, so the message stays owed. It reports the next UTC
day start through a new optional `onDeferredDeadline` option.
- `server/src/services/recovery/service.ts`: stranded-work recovery
passes its `onDeferredDeadline` to the outbox, so the held message is
retried when the limit resets.
- `server/src/services/heartbeat/queue.ts`: if the limit is reached
while an outbox wake is in admission (a race), admission throws a 409
with `reason: heartbeat.daily_*` for `conversation-comment:` keys
instead of writing a `skipped` receipt. The outbox already maps a
matching 409 to `deferred`. Other wakes keep the current skip behavior.
- `server/src/routes/issues.ts` (`GET /issues/:id/queued-comments`):
when a chat has no queue receipt but has messages held by the daily
limit, return them as a `deferred` queue with `executionWait` (reason
and message). Edit, send and discard stay off because the outbox owns
delivery.
- `ui/src/components/task-chat/TaskChatQueuedMessages.tsx`: show the
`executionWait` message for such an outbox-held queue (no queue id and
no target run). Receipt-backed queues keep the current behavior and do
not duplicate the task status.
- Tests: three real-database tests in
`agent-conversation-delivery.test.ts` (hold and resume after the limit
resets, recovery deadline, and a limit reached during real
`heartbeatService.wakeup` admission) and one UI test.

## Verification

- `cd server && pnpm exec vitest run
src/__tests__/agent-conversation-delivery.test.ts`: 10 passed. Without
the source change, the three new tests fail (`expected 'delivered' to be
'deferred'`; the real queue path writes the skipped receipt).
- `cd server && pnpm exec vitest run
src/__tests__/issue-recovery-conversations.test.ts
src/__tests__/agent-conversations.test.ts
src/__tests__/heartbeat-undispatched-execution-wait.test.ts
src/services/heartbeat/queue.test.ts
src/__tests__/agent-chat-messages.test.ts`: 215 passed.
- `cd ui && pnpm exec vitest run
src/components/task-chat/TaskChatQueuedMessages.test.tsx`: 36 passed.
- `pnpm exec tsc --noEmit -p server/tsconfig.json`: clean. `node
scripts/check-token-gates.mjs`: clean.
- Manual: give a chat agent `maxDailyRuns: 1`, send two messages. The
second message shows in the queued messages bar with "<agent> reached
its daily run limit. Your message is saved and sends automatically when
the limit resets at 00:00 UTC."

## Risks

- Behavior change for chat only: a chat message at the daily limit now
waits in the outbox instead of being consumed. It is sent after 00:00
UTC. If an operator raises the limit, the message is sent on the next
recovery pass for that chat; the UI message does not promise an earlier
send.
- Saved state from the previous release: no persisted shape changes.
Messages that an earlier release already consumed with a `skipped`
receipt stay consumed. They are not replayed later, which avoids sending
old messages without notice.
- The queued-comments read adds one agent read and one daily-limit count
for a chat with no queue receipt. This is the same query that admission
runs.
- The recovery deadline is in-process; instance-sleep scheduling does
not get a new deadline from this change.

## Model Used

- Anthropic Claude Opus 5.5 (`claude-opus-5-5`), agentic coding with
tool use (shell, file edits, test runs).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-09 10:03:28 -06:00
DottaandClaude Opus 5.5 c5c587f162 fix(issues): start a deferred children-completed wake the release drain missed (#20180)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - A parent that delegates waits for its children, and is woken when
they finish (`issue_children_completed`)
> - Restart chaos t06 ended with both children done and the parent
blocked forever
> - The children finished while the parent's run was still going, so the
wake was deferred as a follow-up. That run then ended with the agent
setting the parent blocked, and the deferred wake was never started
> - The durable re-drivers for deferred wakes cover only
`issue_blockers_resolved`, so nothing else picks up a missed
`issue_children_completed`
> - This pull request makes both re-drivers cover children-completed
wakes too
> - The benefit is that a parent always hears that its children
finished, even when the release drain misses the deferred wake

## Linked Issues or Issue Description

Refs #19831 (durable ownership plan). Restart chaos wave
`w-20261109T041248-s9501`, task t06 (claude, M1, K2), Daytona per-turn,
master fa7950121d.

**Problem:** parent CHA-10 (all times UTC):
- 04:29:57: run 9cf49f52 started.
- 04:32:35 and 04:32:43: its children CHA-13 and CHA-14 finished.
- 04:32:43: `issue_children_completed` merged into the running turn.
- 04:32:53: that wake was deferred as a follow-up
(`issue_execution_deferred`, `deferred_issue_execution`, no run).
- 04:33:13: the turn ended with the agent setting the parent `blocked`,
a decision made before it saw the children's results.

The deferred wake stayed deferred for the rest of the wave, including
three later restarts. The parent sat blocked with no Retry. The
deferred-receipt worker (`deferred-receipt-work.ts`) and the
stranded-queue resume (`queue.ts`) select deferred dependency wakes with
`issueBlockersResolvedWakePayloadSql`, which matches only
`issue_blockers_resolved`.

## What Changed

- `server/src/services/issue-dependency-wakeups.ts`:
`dependencyResolvedWakePayloadSql` and `isDependencyResolvedWakePayload`
replace the blockers-only predicates. They match both
`issue_blockers_resolved` and `issue_children_completed` in
`_paperclipWakeContext.wakeReason`.
- The deferred-receipt worker and the stranded-queue resume use them, so
a deferred children-completed wake is started once the parent has no
live run, the same way a blockers-resolved one is.
- No code comments added.

## Verification

Red/green:
- `deferred-execution-receipt-work.test.ts` "starts a deferred
children-completed wake left behind when its parent's run blocked the
parent (restart chaos t06)". It sets up a blocked parent whose last run
succeeded, a done child, and the deferred `issue_children_completed`
receipt as t06 left it.
  - On master: the receipt stays `deferred_issue_execution` (red).
- With this PR: the receipt completes with exactly one
`issue_children_completed` run.
- `deferred-execution-receipt-work` and
`heartbeat-dependency-scheduling` pass (60 tests). `tsc --noEmit -p
server` is clean.

## Risks

- The workers now also select deferred children-completed wakes.
Admission is unchanged: they still pass the queue's own gates, and they
start only when the issue has no live run, the same as blockers-resolved
wakes.
- No schema change.

## Model Used

Anthropic Claude Opus 5.5 (`claude-opus-5-5`), via Claude Code, with
tool use (shell, file editing).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above (#20069, #20108)
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes (no
user docs affected)
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green (pending)
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
(pending)
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-08 23:14:47 -06:00
DottaandClaude Opus 5.5 5a51a7685d fix(budgets): raise_budget_and_resume continues the work its budget stopped, once (#20144)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - A budget hard stop cancels the scope's running work; the board
resolves it with Raise budget and resume
> - In the restart-chaos H1 scenario, the cancelled tasks did not
continue after resume and each needed a manual Retry
> - Resume is the board's explicit decision to continue, so the work it
stopped should continue once, as if the board clicked Retry
> - This pull request files that Retry automatically, keyed by the
cancelled run, once the run's stop has settled
> - The benefit is that a budget raise restores the work without manual
Retries, without repeating completed work, and without charging the
run's attempt budget

## Linked Issues or Issue Description

Refs #20143 (bug B; this PR builds on it), #20113 (bug A), #20101
(superseded: split into #20143 and this PR)

**What happened?**
Restart-chaos waves w-20261108T195944-s42 and w-20261108T210118-s9802
(H1). After `raise_budget_and_resume`, CHA-3's budget-cancelled run
(enforcement stop) and CHA-1's run (agent lifecycle pause from the
budget hold) stayed cancelled until someone clicked Retry.

**Expected behavior**
Resuming continues each task its budget stopped, exactly once, with no
attempt charged, an activity entry, and no repeat of work that already
continued. A run a person stopped stays stopped.

**Steps to reproduce**
Set a budget below spend while a task runs; let the stop cancel the run;
resolve with Raise budget and resume. Before this change, no new run is
queued.

## What Changed

- New table `budget_resume_claims` (migration 0451). One row per
cancelled run, outside the run's result JSON, so a Stop that settles
during the resume cannot erase it.
- `markBudgetCancelledWorkForResume` (called by `resolveIncident` before
the incident closes): claims every task run its budget stopped since the
incident opened. That covers runs budget enforcement fenced, including
stops still in flight, and runs the agent lifecycle pause stopped for
this budget (`pauseStop`, carried from the lifecycle operation's
`pauseCause` so a resume before the Stop keeps the link). Runs a person
stopped are excluded. Two indexed passes led by `(company_id, status)`.
- `deliverBudgetResumeContinuations`: once a claimed run's stop settles,
files the resolving board member's Retry (`requestTaskRetry`,
idempotency key `budget-resume:<run>`, with the member's session source
and the chat Retry callback). The Retry path checks, under the task
lock, that the run is still the task's latest and the task is open, so
continued or completed work is never repeated. Claim settlement and its
activity entry commit together; retryable refusals and errors retry.
- Delivery runs in the always-on budget-enforcement worker after each
pass's Stop delivery. Its schedule includes deliverable claims and the
earliest stale-claim expiry. The execution-continuation worker is a
backstop.
- `agent.paused` / `agent.resumed` logging is in #20113.
`budget.cancelled_work_resume_requested` (incident) and
`budget.cancelled_work_continued` / `_not_continued` (task) are recorded
here.

## Verification

- New `budget-resume-continuation.test.ts` (Postgres, real
`resolveIncident` → claims → `requestTaskRetry` → real `resumeTaskRetry`
into a queued run):
- each task continues once, including a blocked task; repeat delivery or
resolve saves nothing new;
- a stop still in flight at resume, whose terminal write replaces the
result JSON, is still continued;
  - a 30-task scope is fully continued;
- a lifecycle-pause stop caused by the budget is continued, and one
caused by a manual pause is not;
- continued work, done tasks, a run that finished before its stop, and
person-stopped runs (including ones enforcement also fenced) are not
continued.
- `lifecycle.test.ts`: the pause records its cause on the operation and
on stopped runs, including when the budget is resumed before the pause's
Stop. `budget-enforcement-worker.test.ts`: delivery after Stop delivery,
and a wake at claim expiry.
- 287 tests across the affected suites passed. Server typecheck
(`typecheck-layers`, low-memory): no errors.
- Not run: the H1 chaos rerun (Phase 3 runs it after merge).

## Risks

- Resume now continues budget-stopped tasks automatically. A board that
wants a task stopped can Stop it again; person-stopped runs are never
continued.
- A new table and one index (migration 0451).

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with
tool use (shell, file edits, test execution). Extended reasoning
enabled.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-08 22:56:28 -06:00
DottaandClaude Opus 5.5 c49ab6b9ee feat(issues): wake the parent once when a child or blocker stalls on the board (#20098)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - A parent task delegates to children and waits on blockers. Its agent
learns of progress only through wakes
> - Today only completion (`issue_children_completed`) and resolution
(`issue_blockers_resolved`) wake a waiting issue
> - In restart chaos `w-20261108T181313-s9701` t05, a blocker stopped on
a recovery action that needs the board, and its parent sat silently
blocked for 50+ minutes
> - This pull request wakes the waiting agent once per such stall, tells
it what it can do, and shows the stall on the parent's page with the
child's Retry
> - The benefit is that a stuck child or blocker no longer silently
strands its parent

## Linked Issues or Issue Description

Refs #19831 (durable ownership plan; restart chaos campaign). Restart
chaos wave `w-20261108T181313-s9701`, task t05 (M1, claude).

**Problem**

From the kept database:
- CHA-8 `blocks` CHA-5.
- CHA-8's board-owned recovery action (`native_session_retry_exhausted`)
was created at 18:44:02.909 and resolved with outcome `blocked` at
18:44:08, when CHA-8 moved to `blocked` for the board.
- CHA-5's only wake in the whole wave was its `issue_assigned` at
18:20:48. Its agent never heard about CHA-8.

**Expected behavior**
- When a child or blocker stalls on the board, the waiting agent is
woken once. It can then re-delegate, escalate, or block with a reason.
- The board sees the stall on the waiting task, with the child's Retry.

## What Changed

- **Shared:**
- `ISSUE_BLOCKER_STALLED_WAKE_REASON` (`issue_blocker_stalled`),
`ISSUE_BLOCKER_STALL_RELATIONS`, and the types
`IssueBlockerStallRelation` and `IssueBlockerStalledWakeContext`;
  - `Issue.stalledDependencies`.
- **Server, `services/recovery/blocker-stall-wakeups.ts`:**
- A stall is an issue that is not done or cancelled, whose latest
recovery action needs the board. That means either open
(`active`/`escalated`) and board-owned or escalated, or board-owned and
resolved as `blocked` while the issue is still `blocked`. The second
case is what t05 needed: recovery resolves its action that way when it
hands the issue to the board.
- Waiters are the parent, and every issue the stalled one `blocks`, when
they are open, visible and agent-assigned.
- Each waiter gets one wake per stall. The idempotency key
`issue_blocker_stalled:{waiter}:{stalled}:{recoveryActionId}` is checked
through the indexed `(company_id, payload->>'issueId')` path. A later
stall has a new action id, so it wakes again.
  - Each wake writes activity `issue.blocker_stalled_wake`.
- The pass runs from the recovery-action sweep
(`reconcileActiveRecoveryActions`) and from the per-issue blocked sweep
(`reconcileResolvedDependencyWakeBackstop`, which visits each blocked
issue). No new worker.
- A waiter's agent that cannot read the stalled issue (`issue:read`,
which honors private visibility) is woken without its title, identifier
or recovery details; the activity entry withholds them too.
- **Database:** migration `0450` adds the partial unique index
`agent_wakeup_requests_issue_blocker_stalled_uq` on `(company_id,
idempotency_key)` for `issue_blocker_stalled:` keys in delivered or
pending statuses, so two concurrent sweeps cannot both deliver a stall.
It is built `CONCURRENTLY IF NOT EXISTS` outside a transaction (listed
in `MIGRATIONS_WITH_TOP_LEVEL_STATEMENTS`).
- **Queue:** `allowsDependencyBlockedWake` (in
`run-dispatch/domain/wake-context.ts`) lets a stall wake run while the
waiter's blockers are unresolved, at both dependency gates. Without it
the wake was parked until the stalled blocker resolved, which is never.
Pause holds are unchanged.
- **Agent guidance:** the wake payload carries `blockerStall`, and
`renderPaperclipWakePrompt` adds a "Stalled dependency" section. It
names the task and its recovery action and the board's next action, then
the three choices: re-delegate, escalate with a comment, or block with a
reason naming the stalled task.
- **Other reason lists:** `issue_blocker_stalled` joins the
responsible-user wake reasons, the conversation execution-wake reasons
(it never drives a chat turn) and the wake diagnostic's known reasons.
- **Board surface:**
- `GET /issues/:id` returns `stalledDependencies`, readable issues only
(`readableIssueEdgeIds`).
- `StalledDependencyNotice` shows on the issue's chat notices, next to
`IssueBlockedNotice`: each stalled child or blocker, its board next
action, a link, and the child's own Retry (`useTaskRetry`), offered only
when the child's interruption allows it.

## Verification

Red/green:
- `server/src/__tests__/issue-blocker-stall-wakeups.test.ts` (14 tests).
  - On master: no `issue_blocker_stalled` wake is raised.
- With this PR: the parent is woken once per stall, and re-woken after a
new stall. A blocker's dependent is woken.
- The t05 shape (an action resolved as `blocked`) wakes once, and
nothing more after a Retry.
- No wake for an agent-owned action, a done, unassigned or hidden
waiter, or an action resolved another way.
  - `listStalledDependencies` lists children and blockers.
- `heartbeat-dependency-scheduling.test.ts` "admits an
issue_blocker_stalled wake while a blocker is unresolved". On master the
wake was parked (`null`); once admitted, the run-start gate cancelled
it. With this PR it runs with `dependencyBlockedInteraction`. The file:
14 passed.
- `packages/adapter-utils` `server-utils.test.ts`: the new prompt test
failed on master (no `blockerStall`). The file: 141 passed.
- `ui/src/components/StalledDependencyNotice.test.tsx`: 3 passed.
`IssueChatThread.test.tsx`: 109 passed.

Regression and static checks:
- Nearby server suites (recovery durable wait, dependency wake routes,
recovery actions, run-preparation): 149 passed.
- `tsc --noEmit` passes for `packages/shared`, `server` and `ui/src`.
- `pnpm check:token-gates` is clean.

Review round 1 (Greptile, Superagent), each with a regression:
- A backlog waiter is never woken. The waiter's status and assignee are
guarded at enqueue.
- One stall per run: no coalescing, so a merged run cannot keep only the
last stall's context.
- Only a delivered or pending wake ends a stall. A refused one
(wake-on-demand off) is retried after 10 minutes, and an agent that
takes no wakes is skipped without writing a row.
- Company-wide passes resume after the last stall a capped pass reached.
The per-issue sweep also checks the issue's own children and blockers,
which covers an unassigned stalled blocker.
- The dependency gates no longer trust the reason string.
`verifyBlockerStallWake` requires a system request, the stalled issue's
current stall action, and a real child or blocker edge. An
agent-requested wake with the same context is parked (tested).
- The notice shows a refused Retry's reason, and a lost response as
"Taking longer than usual…", with Retry still available (tested).

Review round 2 (Greptile), each with a regression:
- Race: two passes claiming one stall leave one delivered row (unique
index; the loser's insert is skipped).
- The company recovery sweep selects companies whose only stall is a
resolved-`blocked` board action, so an unassigned stalled blocker with a
todo waiter is reached.
- Private stalled issue: the waiter's wake and activity carry no title,
identifier or recovery details.
- `GET /issues/:id` always returns `stalledDependencies`, so a cleared
stall replaces the cached list.
- The notice shows a failed child read with a Reload button (tested).
- `pnpm --filter @paperclipai/db check:migrations` passes.

Review round 3 (Greptile), each with a regression:
- A stall wake that fails to enqueue is retried: the recovery-action
pass reports `blockerStallWakeFailures` and the dependency pass counts
it in `enqueueFailed`, so the worker throws and retries at its backoff
(`issue-recovery-work-lifecycle.test.ts`).
- The notice drops a stall once the child's refreshed status has moved
on (`StalledDependencyNotice.test.tsx`, 7 tests).

## Risks

- A deploy wakes the waiters of every issue that is stalled today, once
each. That is intended (they are stranded now), and it's bounded at 200
stalls per pass.
- A stall wake may run while blockers are unresolved, like a comment
wake. It is bounded to one per stall, and pause holds still apply.
- The agent skill (`skills/paperclip`, CODEOWNER-owned) does not yet
list the new reason. The wake prompt carries the guidance.
- One additive index, built concurrently; no persisted run state change.
Existing rows cannot violate it before deploy, since no
`issue_blocker_stalled:` keys exist yet.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with
tool use (shell, file edits).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-08 18:26:07 -06:00
DottaandClaude Opus 5.5 c4ba3974a7 fix(heartbeat): close run admission before a graceful shutdown closes its listener (t09) (#20102)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - A graceful restart (K2) drains the control plane: it closes HTTP
admission, suspends running runs, and the next boot resumes them
> - Run admission stayed open while the HTTP listener closed.
Heartbeat's shutdown flag was set only later, inside hot-restart
preparation
> - A run that finished in that window released its issue and promoted
the queued comment wake. That started a new run that had no callback
listener
> - A remote warm continuation then failed with
`local_runtime_api_listener_unavailable`, and the task needed a Retry
(restart chaos t09)
> - This pull request closes run admission before the listener closes,
so the promoted wake stays queued for the next boot
> - The benefit is that a comment sent during a deploy continues on its
own after the restart

## Linked Issues or Issue Description

Refs #19596

**What happened?**
In restart-chaos wave w-20261108T192459-s9501 (Daytona warm, Codex C1,
K2), a K2 SIGTERM started a graceful drain at 19:42:52 UTC, and the HTTP
listener closed first. At 19:43:03 the running turn finished and
released its issue. That promoted the queued comment wake, and
`startNextQueuedRunForAgent` started a new run about 11 s into the
drain. Backend setup resolved the local runtime API URL, found the
listener closed, and threw `local_runtime_api_listener_unavailable`. The
remote target is excluded from the closed-listener handoff, so the run
failed, and the task waited for a manual Retry.

**Expected behavior**
No queued run starts once a graceful shutdown has begun. A wake promoted
during the drain stays queued, and the next boot starts it with no
Retry.

**Steps to reproduce**
1. Run a remote warm task and post a comment while its turn runs, so the
comment wake queues behind it.
2. Send SIGTERM to the control plane just before the turn finishes.
3. Before this change, a new run starts during the drain and fails with
`local_runtime_api_listener_unavailable`.

**Paperclip version or commit**
master at d007afbf86 (the wave ran on c5a172a183).

## What Changed

- `heartbeat/run-admission.ts` (new): a process-wide run admission gate
(`closeProcessRunAdmission`, `isProcessRunAdmissionClosed`). HTTP routes
build their own heartbeat instances, so the gate cannot live in one
instance.
- `heartbeat/queue.ts`: a new optional dependency,
`isRunAdmissionClosed`, which defaults to the process-wide gate.
`startNextQueuedRunForAgent`, `resumeQueuedRuns` and
`resumeQueuedRunsAfterDrain` start nothing (and read nothing) once it
returns true. Wakes are still recorded and promoted; only the start is
held.
- `heartbeat.ts`: also honors its own `shutdownInProgress` flag.
- `shutdown.ts`: `closeHttpListenerForShutdown` takes
`closeRunAdmission` and calls it first, before it checks or closes the
listener. `index.ts` passes `closeProcessRunAdmission`.

## Verification

- Red/green, new tests:
- `queue.test.ts`: "starts no run once shutdown closed run admission"
(for `startNextQueuedRunForAgent` and `resumeQueuedRuns`), and "honors
the process-wide run admission gate in every heartbeat instance".
- `shutdown.test.ts`: "closes run admission before it stops accepting
requests".
- `pnpm exec vitest run src/services/heartbeat/queue.test.ts
src/services/heartbeat/recovery.test.ts
src/__tests__/heartbeat-comment-wake-batching.test.ts
src/services/native-runtime/native-startup-retry.integration.test.ts
src/shutdown.test.ts` (server): 5 files, 277 tests passed.
- `PAPERCLIP_TYPECHECK_LOW_MEMORY=1 pnpm typecheck` (server): passed.

## Risks

- Low risk. Only queued-run starts are held during a shutdown that has
already begun; wakes, drains, suspension and finalizers are unchanged.
The next boot's queued-run dispatch starts held runs.
- Known remaining window: a run admitted just before shutdown can still
reach backend setup after the listener closed. A local runner hands off
to restart recovery there. A remote warm continuation still fails,
because the remote target is excluded from that handoff (#19596) and the
bootstrap retry does not cover warm continuations. This change removes
the t09 sequence, where the run started after shutdown had begun; it
does not remove that narrower window.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), via Claude Code with tool use
(shell, file edits, test execution, a read-only research subagent).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-08 14:59:55 -06:00
DottaandClaude Opus 5.5 8475826d2d fix(wake-queue): deliver user comments whose wake a restart lost or a stale continuation dropped (#19992)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - A user's follow-up comment on a task must reach the agent exactly
once, through restarts (invariant 4)
> - The final unmasked local chaos storm (96 tasks, 31 restarts) passed
94 tasks. The 2 failures were both lost user comments
> - In t69, a restart killed the server between saving the comment and
writing its wake. In t72, a comment's own run was cancelled as stale,
because the earlier run completed the task first without reading the
comment
> - This pull request adds a reconciler rule that gives a lost comment
its wake, and saves the comment before a stale cancellation
> - The benefit is that a user's message is never silently dropped when
a restart or a completion race hits at the wrong moment

## Linked Issues or Issue Description

Refs #19956 (work-intent outbox), #19944, #19831 (plan, invariant 4).

**What happened?**
In chaos wave `w-20261108T055444-s9401` (local, unmasked, codex and
claude, 30-min K13 storm, master `46bf913fb9`), 94 of 96 tasks passed.
Two failed:
- **t69, R1 `rested_not_done`.** The user's comment was saved at
06:14:59.358 and reopened the task to `todo`. A K1 SIGKILL fired 28 ms
later, before the wake was written. No wake row exists. Recovery skips a
`todo` task whose last run succeeded, so the task sat with no run until
the wave ended.
- **t72, R4 `concurrent_runs`.** A comment posted during a run queued
its own run. That run was claimed at 06:16:04.874. The first run's
completion marked the task `done` 2 ms later. The comment's run was then
cancelled with `continuation_task_ownership_changed` before dispatch,
and the comment was lost.

**Expected behavior**
Each accepted user comment is delivered once, unless the task is
cancelled or reassigned, or a person closes it.

**Steps to reproduce**
`node cli/node_modules/tsx/dist/cli.mjs tests/restart-chaos/main.ts
--replay w-20261108T055444-s9401/t69` (or `.../t72`).

## What Changed

- `recovery/ownership-invariant-report.ts`: a new reconciler-owned I4
rule, `user_comment_without_wake`. It finds a user comment that meets
all of these conditions:
  - it is newer than every run of the task;
- the task is assigned, is not a conversation, has no live run or lock,
and has at least one earlier run;
  - no wake request carries the comment.

A comment younger than 30 s is not reported yet, because it may still
get its normal wake. Its end-of-grace time is returned as `nextDueAt`.
- `native-runtime/native-finalization-reconciler.ts`: the backstop step
is now exported as `applyOwnershipReportBackstops`. For each such
comment it saves the missing outbox receipt (`executionWait: wake_lost`)
and promotes it.
- `work-intent-outbox.ts`: new `saveUndeliveredUserComments`, which the
reconciler rule and the stale-run path both use. It saves only live user
comments that no completed run received. It writes nothing for a task
that is reassigned, is a conversation, or has a status the caller does
not allow.
- `heartbeat/queue.ts`: the saved-receipt pass that already sends
pause-saved messages also sends `wake_lost` receipts. It uses the same
per-comment consumption check and the same chat-input exclusion.
- `heartbeat/stale-comment-continuation.ts` and `heartbeat.ts`: before a
stale continuation is cancelled, its undelivered user comments are saved
as a deferred receipt. The release drain then reopens the `done` task
and delivers them once. This applies only when an agent run that started
before the comment completed the task after it. A task that a person
marks done is left closed.
- `tests/restart-chaos/grader.ts`: R4 ignores runs cancelled before
dispatch (`continuation_task_ownership_changed`) when it looks for
overlapping execution. Those runs never executed. Comment consumption
still counts them.

## Verification

Each focused file ran alone in one process (`--maxWorkers=1`):
- `heartbeat-held-comment-wake.test.ts` (22 pass). This includes two new
cases:
- t69 shape: the reconciler rule fires, the backstop delivers the
comment once, and a second pass does nothing;
- t72 shape: the stale run is cancelled, the task reopens, and the
comment is delivered once.

  Both fail with the rule or the save disabled, and pass with them.
- `ownership-reconciliation-report.test.ts` (23 pass). It includes the
rule's boundaries: a carried comment, a too-young comment (deadline
only) and an already-read comment.
- `tests/restart-chaos/grader.test.ts` (17 pass). The new R4 case fails
with the old grader. A cancelled run that is not a pre-dispatch
cancellation still fails R4.
- Unchanged and passing: comment wake batching (27), refused assignment
wake (3), wake-queue postgres adapter (103), stale queue invalidation
(68), deferred receipt work (45). The first version also reopened a task
that a person had marked done, which broke one deferred-receipt test.
That case is now excluded.
- The server package typecheck and the restart-chaos harness typecheck
pass.
- Same-session chaos context on master: K6 crash loop
`w-20261108T063326-s9402`: 6 of 6 pass. The K4 long-hold wave is still
running. After merge, I'll replay only the targeted fault shapes (t69
and t72).

## Risks

- The reconciler rule runs on each report pass. It is bounded by the
1-hour lookback and the per-kind row cap, and it excludes conversation
tasks, so chat input keeps its own authorization.
- A comment younger than 30 s waits up to the end of its grace period
before the backstop acts.
- The stale-run save reopens a `done` task only for a comment that the
completing run could not have read.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, with tool use and code
execution in Claude Code.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-08 02:14:45 -06:00
DottaandClaude Opus 5.5 d33b3ac263 fix(wake-queue): save temporarily refused work intents and promote them through one path (#19956)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Users send work to agents as assignments, comments and Retries. The
wake queue delivers each one as a run
> - When an admission check refused a wake for a temporary reason, the
wake often ended as a terminal skip, so the work was lost
> - Restart-chaos waves found dropped comments and Retries (RC-37,
s7532) and double delivery (RC-53). Each fix covered one hold type
> - The durable ownership plan (section E) asks for one outbox rule: a
closed set of terminal outcomes, a saved deferral for every temporary
refusal, and one promotion path
> - This pull request adds that rule. It saves messages refused by a
pause, promotes deferred intents from every hold-release event through
one function, and adds a reconciler backstop
> - The benefit is that an accepted message is delivered exactly once
after a pause lifts, and the reconciler reports any intent that is stuck
or dropped

## Linked Issues or Issue Description

Refs #19831 (plan, section E), #19838 (inventory, wake-queue rows and
section 1b), #19927 (Phase 2 data: the I4 false positive), #19702,
#19741, #19829, #19826. Builds on #19944 (section D, merged).

**What happened?**
- A user commented while the agent was paused, or while the company was
paused. Admission refused the wake. Nothing saved the message as
pending, so when the pause lifted, nothing delivered it.
- Hold-release events woke different subsets of workers. A saved intent
then waited out a 30-second refusal backoff after its hold cleared.
- The I4 reconciler check matched free text with a regular expression.
Phase 2 found a false positive: a delivered retry whose error said
"retrying once".

**Expected behavior**
An accepted work intent ends only as delivered, consumed by a later run,
task cancelled, or hard stop. Every temporary refusal saves the intent
as `deferred` with its reason and its release trigger. Every
hold-release event promotes deferred intents through one function
(invariant 4).

**Steps to reproduce**
Pause an agent. Post a user comment on its task. Resume the agent. On
`master` the comment is never delivered as a wake.

## What Changed

- New `server/src/services/work-intent-outbox.ts`:
- `WORK_INTENT_TERMINAL_OUTCOMES`: the closed set of terminal outcomes.
- `TEMPORARY_REFUSAL_TRIGGERS`: maps each temporary refusal code to its
release trigger.
- `promoteDeferredWorkIntents`: the one promotion function. It removes
the 30-second refusal backoff from the matching deferred intents. It
then wakes run dispatch, the saved-receipt worker and stranded-work
recovery, and hints each saved intent of the issue.
- `heartbeat/queue.ts`: the #19829 save-as-deferred block is now a
shared helper. A user's message refused by a paused agent, a paused
company, or a budget pause that is not a reached hard stop is saved with
`executionWait: { reason, trigger, message }`. The caller still gets a
409. The message is saved only when the task's latest run is terminal,
because the release drain promotes a saved message behind that run. A
task that never ran keeps the message in the task, and stranded-work
recovery starts the task once the pause lifts. A `pending_approval`
agent and a task-tree hold are not changed here: the release drain still
fails a promoted wake for a pending approval, and tree holds have their
own resume path.
- Hold-release events call `promoteDeferredWorkIntents`:
  - accounting settled (`run-cost-accounting.ts`);
  - environment lease released (`environments.ts`, two sites);
  - native run projected terminal (`native-run-projection.ts`);
  - budget pause lifted (`budgets.ts`);
  - company reactivated (`companies.ts`);
  - task-tree hold released (`issue-tree-control.ts`);
  - agent lifecycle ready (`agent-lifecycle-driver.ts`).
- Reconciler (`recovery/ownership-registry.ts`,
`ownership-invariant-report.ts`, `native-finalization-reconciler.ts`):
- registers three new kinds: `wake_request_deferred`, `queued_run` and
`scheduled_retry_run`;
- I4 now reads the closed refusal code (the wake `reason`) of accepted
intents, not free text;
- a new I4 check reports a deferred pause refusal whose pause has lifted
for more than 5 minutes. The worker then promotes it as a backstop;
- a lifted pause inside its 5-minute grace window returns its deadline
through `nextDueAt`, and the worker also wakes on agent-lifecycle
signals (company and agent pause changes). So a missed release event is
still checked.
- `doc/SPEC-implementation.md`: adds the rule "Accepted work intents are
delivered exactly once".

## Verification

Each focused file ran alone in one vitest process (`--maxWorkers=1`) on
embedded Postgres. Results at `2875c85fd2`:

| Question | Loop | Elapsed | Result |
|---|---|---|---|
| Is a comment refused by a pause saved, then delivered once after the
pause lifts? | `heartbeat-held-comment-wake.test.ts -t "pause lifts"` |
8 s | 2 pass. With `queue.ts` from `master`, both fail: no intent is
saved |
| Does I4 use the closed code, and does it catch a stuck deferral? |
`ownership-reconciliation-report.test.ts` | 45 s | 20 pass. This
includes the Phase 2 "retrying once" false positive and the case
"paused, then lifted" |
| No regression on the paths that changed | held-comment (15),
archived-company guard (8), undispatched execution wait (32), deferred
receipt work (45), recovery pause durability (16), native run projection
work (55), tree-control routes and services (19, 1, 7) | 8–334 s each |
All pass |

- Exactly-once: each pause test runs two promotions (a release event,
then the reconciler backstop) and many dispatch passes. It asserts one
delivery. The existing consumption tests (RC-53) still pass.
- Server package typecheck passes.
- Speed: nothing new runs before `turn.start`. The new admission work
happens only on a refusal. Promotion runs in the release transaction and
in the background reconciler.
- Not run here: chaos waves. The coordinating session schedules them on
the shared harness.

## Risks

- `promoteDeferredWorkIntents` moves `updated_at` back for deferred
intents that were refused in the last 30 seconds. A busy company with
many release events can retry refused intents more often. Each retry
re-runs normal admission, and the refusal resets the backoff.
- More release sites now wake run dispatch and stranded-work recovery.
These notifications are coalesced per company.
- Lifting a pause is now the operator's explicit authorization to send
what the pause refused, as Send is after a Stop. When the pause stopped
the task's run, the lifted pause issues the task's next explicit wake,
which adopts the saved message once. Other messages queued behind an
acknowledged Stop keep the existing rule. If Stop recovery still holds
the task, the message waits for that recovery.
- An agent pause's stop sweep keeps the messages that the pause deferred
(`preservePauseDeferred`). Terminate and cleanup stops still end them.
- The backstop check reads only pause refusals (`company.inactive`,
`agent.not_invokable`), because those holds can be checked exactly.
Other deferred kinds keep their existing promotion paths.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, with tool use and code
execution in Claude Code.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 23:43:17 -06:00
DottaandClaude Opus 5.5 18644a3263 feat(recovery): instrument 20 durable write boundaries with crash points (#19938)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - A control-plane restart between two durable writes leaves an
in-progress record owned by a dead process
> - #19937 added `crashPoint(name)` and a registry of 20 named
boundaries from the Phase 0 inventory
> - A name without a call site cannot fire, so the crash-point suite
cannot test it
> - This pull request puts one call at each registered boundary and adds
a test that keeps the registry and the call sites in step
> - The benefit is that the on-demand suite (next pull request) can kill
the control plane at every known write-ahead gap

## Linked Issues or Issue Description

Refs #19831 (plan, Phase 5). Refs #19846 (inventory, "Write-ahead
coverage"). Stacked on #19937 (helper and registry). Refs #19861
(ownable kind ids).

**Problem**
The registered crash points have no call sites.

**Expected behavior**
Each registered point is called at its gap: after the first durable
write or outside effect returns, before the next one starts. Disarmed
(always in production) each call is one comparison.

**Scope**
Call sites and a coverage test only. The suite runner and CI workflow
follow.

## What Changed

- Server call sites (`@paperclipai/shared/crash-points`):
- `sandbox-creation-operations.ts`: around the provider `create` call
(intent → provider → lease).
- `native-session-executor.ts`: after `native.process_start_requested`,
before spawn.
- `paperclip-control-plane-port.ts`: after the result-accept
transaction, before finalization starts (only when a result was
inserted).
- `native-run-finalizer.ts`: after `commitNativeStatusDecision`, before
the run projection.
- `workspace-operations.ts`: `workspace_finalize` only — after the
running row, and after `settle()` before the done row.
- `environment-runtime.ts`: provider release → lease row; teardown claim
→ destroy; reusable destroy → lease release; stop-and-retain claim →
stop.
- `heartbeat.ts`: lease release → runtime services; budget reservation
hold → dispatch.
- `heartbeat/queue.ts`: run claimed `running` → wake request `claimed`.
- `run-cost-accounting.ts`, `usage-receipts.ts`: accounting commit →
spool unlink; receipt spool → DB row → unlink.
- `packages/paperclip-runner/src/crash-point.ts`: a small copy of the
helper for controller code in this package, which does not depend on
`@paperclipai/shared` (adding that dependency would change the runner
content ID). It arms only `runner.*` names. runnerd never sees the
variable: its environment is an allowlist.
- Runner call sites: after the runnerd spawn, before its identity is
published (both spawn paths); `turn.start` result received → controller
journal saved → next send.
- `server/src/__tests__/crash-point-call-sites.test.ts`: every
registered point has a call site, every call names a registered point,
and every `kinds` entry is an ownable kind id of the Phase 1 registry.

## Verification

- `cd server && npx vitest run
src/__tests__/crash-point-call-sites.test.ts` → 3 passed.
- `pnpm --filter @paperclipai/server typecheck` → clean. `pnpm --filter
@paperclipai/paperclip-runner exec tsc --noEmit -p .` → clean.
- Behavior with nothing armed is unchanged: each call returns at its
first comparison (measured in #19937: about 3.7 ns).

## Risks

- Low risk. No call changes control flow unless `PAPERCLIP_CRASH_POINT`
names it and `NODE_ENV` is not `production`.
- Points on the path before `turn.start` (process start, runner spawn)
cost nanoseconds, within plan invariant 8.
- `usage-receipts.ts`: the persist-then-unlink one-liner became a block
with the same statements in the same order.
- The runner package change gives the runner a new content ID, as any
runner source change does. No persisted run state changes
(rules/upgrade-safe-run-state.mdc).

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with
tool use (shell, file edits) and a read-only exploration subagent that
mapped the boundaries.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 20:56:33 -06:00
DottaandClaude Opus 5.5 a94881d1a7 fix(heartbeat): save a comment refused by a temporary hold and route post-quarantine input to its own gate (#19829)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - A user's follow-up comment or Retry must be delivered once,
eventually, even when a temporary company admission hold (accounting
still settling) is active
> - #19741 kept claimed runs queued through such a hold and woke held
work when it cleared
> - A restart-chaos wave still lost a comment, because its wake was
refused before admission and written as a terminal skip
> - The same wave left a Retry waiting forever for a stop record of a
process that never existed
> - This pull request saves the refused comment as a deferred receipt,
and routes input after a pre-launch quarantine failure to the
quarantine's own gate
> - The benefit is that the comment is delivered after the hold, and the
task asks for the action that actually unblocks it instead of offering a
Retry that can never start

## Linked Issues or Issue Description

Refs #19741 and #19702.

**What happened?**
In a restart-chaos wave, a failed run's accounting held the company for
600 s.
1. A user commented while the task's run was live. The enqueue budget
gate refused the comment's wake before it reached the deferral behind
the live run. Because it was a user request with no saved receipt, it
was written as `skipped` (`budget.blocked`). The live run finished
without it and the task ended `done`, so the comment was lost.
2. A Retry created a run that the native cleanup-quarantine fence
refused before it requested any runner launch
(`native_session_cleanup_quarantined`, no process events). A second
Retry then waited with `process_identity_missing` ("The previous run has
no verified stop record") for a process that never existed. The task
kept offering Retry, and that Retry could never start.

**Expected behavior**
A comment refused by a temporary hold stays saved and is delivered once
later. Input after a run that was refused before launch is handled by
the quarantine gate: Retry is not offered (send a new message), and a
new message gets the verified-stop check of the previous provider
session.

## What Changed

- `heartbeat/queue.ts`: when the enqueue budget gate refuses a user's
comment wake and the block is temporary (not a reached hard stop, per
`isBoardOwnedBudgetBlock`), the wake is saved as a
`deferred_issue_execution` receipt. The receipt carries the comment ids
and an `executionWait` of `budget.blocked`, and the gate notifies the
deferred-receipt worker and throws `PersistedExecutionWaitRefusal`. It
is not written as `skipped`. Normal promotion (when the live run ends)
and #19741's hold-release wakeups deliver it.
- `native-local-process-stop.ts`: new `nativeRunRefusedBeforeLaunch`. It
returns true for a failed native run with
`native_session_cleanup_quarantined`, no recorded process, and no
launch-request or identity event.
- `explicit-native-continuation.ts`: such a run passes the
process-identity check, so the existing quarantine branch decides. A
Retry gets `cleanup_quarantined` (shown with `canRetry: false` and "send
a new message"). A new message gets
`verifyStoppedNativeSessionForContinuation`. Any launch request or
identity record keeps the original stop proofs.

- `native-session-executor.ts`
(`verifyStoppedNativeSessionForContinuation`): when the source has no
process record and no launch event, the verifier relies on the previous
owner's stop evidence. Before this change it required the source to
share the owner's process identity, so a new message stayed held even
after the owner stopped. A source that carries a process identity must
still match the owner exactly.

## Verification

Each new test fails on `master` and passes with this change, on embedded
Postgres:
- `server/src/__tests__/heartbeat-held-comment-wake.test.ts`: a comment
whose wake the hold refuses at enqueue is saved with a `budget.blocked`
wait and is not skipped. It is delivered exactly once after accounting
settles.
- `server/src/services/explicit-native-continuation.test.ts`:
- A run refused by the quarantine before launch routes a new message to
the quarantine's stop verification and a Retry to `cleanup_quarantined`.
These failed on `master` with `process_identity_missing`.
- Guards (green on both): a quarantined run that requested a launch, and
another failure without a process record, still require
`process_identity_missing`.
- `server/src/services/quarantined-task-retry.test.ts`: a never-launched
quarantined source is certified once the previous owner has stopped (red
on `master`). It stays held if the source requested a launch or the
owner is still running. All 31 tests pass, and the `stopped native
conversation physical cleanup` suite passes (46).
- Related suites pass locally (6 files, 620 tests): explicit native
continuation, held comment wake, queued comments routes, comment wake
batching, refused assignment wake, deferred receipt work. Two
`deferred-execution-receipt-work` tests failed once under parallel load
and passed when run alone.

## Risks

- The saved-comment path applies only to user comment wakes refused by a
temporary budget hold. Hard stops, system wakes, case handoffs, durable
chat requests, and existing saved receipts are unchanged.
- The pre-launch rule is limited to the quarantine failure code with no
launch evidence. Every other missing process identity still requires the
existing stop proof.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, run as an agent in
Claude Code with tool use (shell, file editing, local test execution,
kept restart-chaos instance inspection).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 08:54:14 -06:00
DottaandPaperclip 384fa2b7be Allow context compaction while Agent Chat waits (#19801)
## Thinking Path

> - Paperclip manages agents and their work.
> - Agent Chat can wait for a user between useful turns.
> - The task Properties panel already lets that user request context
compaction.
> - The queue treated that maintenance request as an ordinary wake and
refused it while the chat waited.
> - Compaction must maintain that session without starting a new
conversation turn.
> - This change admits the authenticated request, preserves the waiting
state during execution, and prevents competing requests from saving
extra maintenance work.
> - Ordinary and unauthorized wakes remain blocked.

## Linked Issues or Issue Description

Refs #19378, which introduced the existing Compact now action. Refs
#19377, whose review identified this independent queue admission gap.
Searches for `context_compaction` with `waiting` and `Compact now` with
`waiting` found no existing fix for this admission bug.

**What happened?**

An owner clicks Compact now for a waiting Agent Chat conversation. The
real compaction service reaches the heartbeat queue, receives no run,
and reports that compaction did not start.

**Expected behavior**

The authenticated owner can request one separate compaction run while
the chat waits. The request must keep its existing actor, task, agent,
budget, and execution checks. Ordinary waiting-chat wakes must stay
blocked.

**Steps to reproduce**

1. Use an open Agent Chat conversation whose agent supports compaction.
2. Wait until the conversation is waiting for its owner.
3. Request Compact now from the task Properties panel.
4. Observe the refusal before this fix. The new database regression
calls the real compaction service and queue to reproduce it.

## What Changed

- Admit only the existing complete manual compaction envelope. Require a
user actor, no coalescing, the compaction intent, and matching nonempty
request IDs.
- Preserve the waiting conversation state, session generation, reply
boundary and unanswered questions in the existing conversation
preparation owner.
- Recheck active and deferred maintenance under the existing issue
admission lock. Competing clicks cannot save a second maintenance
request.
- Add execution coverage with and without a pending question. Add
concurrent admission and deferred-request controls, including admission
after the pending receipt is cancelled. Keep the existing authorization
and ordinary conversation controls.

## Verification

- The original service-to-queue request failed before the admission fix.
- The execution regression then caught the review finding: compaction
succeeded, but both waiting-state controls failed. The same complete
controls passed after the conversation preparation fix.
- A real concurrent request test recorded two durable maintenance
receipts before the atomic admission fix. It counts deferred authority
as well as admitted runs.
- Current integrated candidate: normal current Runner core and surface
TypeScript exports passed. All seven normal App typecheck programs
passed. The whole queue/execution suites passed 86/86, the whole
context-compaction suite passed 5/5, and 11 selected ordinary
conversation controls passed. There were 102 actual passes; the 29
unselected conversation cases are not counted as passes.
- Database controls use fresh dedicated PostgreSQL 17 databases, Node
24, one test worker and pools capped at four. Private fixture adapters
use the existing dedicated database and normal migrations. They keep
test bodies, assertions and time limits intact.
- Earlier fixture and setup failures remain recorded separately from
product failures. These include an omitted external URL, an invalid
closed-task fixture, a missing crypto import, an incorrect
result-envelope matcher, and an unavailable test-library helper. Each
was corrected at its owning boundary. A test-output text matcher also
missed Vitest's abbreviated failure; the raw assertion stack and failure
were retained.
- Local session tests exercise the actual admission, native Runner
lifecycle, accepted result and persisted conversation state through the
supported test backend. They do not prove live provider compaction, UI
rendering or deployed suspension.
- Exact-head remote CI passed: 59 successful checks, three intentional
skips and one neutral check. Greptile and Ponytail both reviewed this
head at 5/5 with no actionable findings. Ponytail explicitly marked it
Ship.
- Master advanced during review. A local merge evaluation preserves
every unrelated master change and all four PR files. The current App
programs and all three execution controls passed again on that projected
squash tree to check the workspace-finalization seam.

## Risks

The change affects admission and preparation for one maintenance
request. A broad exception could start ordinary work or reopen a waiting
chat. The request therefore keeps the complete existing manual envelope
and authorization checks. Conversation preparation still checks the
session generation. The existing issue lock owns duplicate admission.
There is no new timer, database migration or provider protocol.

## Model Used

OpenAI Codex based on GPT-6 managed the change and reviewed the shared
queue fix. OpenAI `gpt-6.1-sol` authored the focused regression
coverage. Both used reasoning, repository tools and local code
execution. The runtime did not expose the context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes (the
existing Compact now documentation remains accurate; no new
configuration is added)
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-07 05:11:44 -06:00
Devin FoleyandPaperclip bf12b2d8ad fix: retry reviewed chat setup after temporary contention (#19787)
Retry reviewed chat preparation with the original accepted input.

Bound retries for authorization proof waits that expire before provider
work. Preserve the original answer receipt and queue later wakes
separately. Keep plan confirmation semantics by assigning the interaction
marker only to question answer delivery and legacy question payloads.

Verification: 433 tests across four backend suites, all 17 project-chat
browser tests, and all server source/test typecheck layers passed. The
plan approval regression was reproduced on the previous head before the
fix. All applicable CI passed and exact-head Greptile Apex scored 5/5.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-11-07 02:14:42 -08:00
DottaandClaude Opus 5.5 e620ce3678 fix(heartbeat): deliver each accepted follow-up exactly once through restarts and admission holds (#19741)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - A user can comment, click Retry, or rely on automatic recovery while
an agent works on a task
> - Restart-chaos waves showed accepted follow-ups being dropped, or
delivered twice, around restarts and temporary company admission holds
(accounting still settling after a restart)
> - A dropped comment means the user's request is never acted on. A
duplicate reopens work that is already done
> - This pull request makes accepted work wait through a temporary hold
and resume when it clears. It also stops a comment from being promoted
again after a completed run already received it
> - The benefit is that each accepted follow-up is delivered exactly
once, eventually, unless the task is cancelled or a reached hard stop
applies

## Linked Issues or Issue Description

Refs #19702 (never-started tasks during a temporary hold), #19700
(bounded accounting hold), #14910 (stale reopen from a deferred wake; no
file overlap).

**What happened?**
Restart-chaos waves found these shapes:
1. **Comment wake cancelled.** A comment was saved behind a run and
promoted when the run ended. A temporary company hold refused the
unstarted queued run, and claim cancelled it terminally. The recovery
wake that followed was cancelled the same way, and the task rested
`blocked` without the comment.
2. **Dead Retry.** A Retry click during the hold stayed
`deferred_issue_execution` after the hold cleared. Nothing woke it, and
the issue held no execution lock.
3. **Refused assignment.** A new task's first wake was refused during
the hold. Nothing woke stranded-work recovery when the hold cleared, so
the task stayed `todo` with no run.
4. **Silent comment after recovery.** A comment was saved behind a run
that restart recovery finalized. A company-scoped hint waited out the 30
s deferred-receipt rescan, so the task looked done with the message
unread.
5. **Comment delivered twice.** A run whose provider process was lost
had a saved comment. Its retry started after the comment, received it in
its prompt (task history), did the work, and finished the task. The
saved wake was then promoted anyway, which reopened the done task.

**Expected behavior**
An accepted follow-up (comment, Retry, recovery) is delivered exactly
once, eventually, unless the task is cancelled. A temporary refusal
never ends in a terminal cancel, skip, or block. Reaching a hard stop
remains the board's decision.

## What Changed

- `heartbeat/queue.ts`: on a budget block at claim, an unstarted queued
run stays queued when the block is temporary. A reached hard stop or
blocked unpriced usage still cancels it.
- `recovery/service.ts`: stranded-work recovery waits out a temporary
hold for any task. It does not escalate to `blocked`. This extends
#19702 beyond never-started tasks.
- `budget-block-ownership.ts`: a shared `isBoardOwnedBudgetBlock`, moved
out of the recovery service. `budgets.ts` is unchanged.
- `run-cost-accounting.ts`: settling a run's accounting wakes queued-run
dispatch, the deferred-receipt worker, and stranded-work recovery. Held
work waits passively; this is what resumes it.
- `deferred-execution-notifications.ts`: new
`notifyDeferredWakesForIssue`. `native-run-projection.ts` (a run
reaching a terminal status) and `environments.ts` (lease release) now
hint each saved wake of the issue by id, so delivery does not wait out
the company rescan interval.
- `wake-queue/adapters/postgres.ts`: release treats a saved comment as
delivered only when a succeeded run of the wake's agent on that issue
started after the comment's latest revision, and either received the
comment as its own wake input (`wakeCommentIds`) or was a retry of the
interrupted turn whose task history included it. In that case it cancels
the saved wake with "Queued messages were already delivered to a
completed run" and leaves the task as it is. Task history alone never
consumes a message saved for its own turn. One query checks the whole
batch.
- `run-cost-accounting.ts`: settling late receipt debt also sends the
hold-release notifications.
- `doc/execution-semantics.md`: documents the rule.

## Verification

Red on `master` and green with this change, on embedded Postgres:
- `server/src/__tests__/heartbeat-held-comment-wake.test.ts`:
- A promoted comment refused by the hold stays pending, with no
cancelled run and no `blocked` task. It is delivered once after the hold
clears through real `accountRunCost`.
- A Retry clicked during the hold starts exactly once after accounting
settles, which wakes its owner.
- A new task whose assignment was refused during the hold starts once
accounting settles, which wakes stranded-work recovery.
- A comment that a later succeeded retry already received as history, or
that a later run received as wake input, is consumed without reopening
the task.
- Guard tests (green on both):
- A comment is still delivered in each of these cases: the later run
never received it, it was edited after that run started, it was posted
while the run was already running, or a non-retry run only saw it as
history.
  - A task whose continuation was refused waits out the hold.
  - A reached hard stop is still refused.
- `server/src/__tests__/native-run-projection-work.test.ts`: projecting
a recovered run terminal hints the saved comment's own wake (red on
`master`).
- Related suites pass locally (14 files, 482 tests): wake-queue, queued
comments routes, refused assignment wake, native run projection.
- Live replays (local, unmasked, kept instances):
- `--replay w-20261107T031005-s7501/t04` (Claude C1, K1): PASS. The
comment's run was created at 03:56:24 during the hold, stayed queued,
started at 04:06:24 when the hold cleared, and succeeded. It is the only
run carrying the comment.
- `--replay w-20261107T002911-s7401/t01` (before the per-wake hint): it
reproduced shape 4. Run 592d772f was killed 250 ms after
`run.result.accepted`, released and finalized at restart, and the task
rested `done` with the comment still saved. Calling the existing sweep
on the kept database promoted it, which confirmed that the missing piece
was the trigger.

## Risks

- A queued run can now sit queued for the length of a temporary hold,
which #19700 bounds. It does not hold the issue's execution lock, so
later comments still coalesce into it.
- The delivered-comment rule depends on the run's recorded prompt
context. A succeeded run that received the comment in its history counts
as delivery, even if the agent did not act on it. This matches
exactly-once delivery semantics.
- Settling accounting now emits three extra notifications per run. They
are coalesced per company.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, run as an agent in
Claude Code with tool use (shell, file editing, local test execution,
live restart-chaos replays).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-07 00:24:09 -06:00
DottaandPaperclip c9391720a1 fix(heartbeat): send saved follow-ups after task completion (#19600)
## Thinking Path

> - Paperclip manages agents and their work.
> - Task messages remain in a durable queue while an earlier run saves
its result.
> - That result can mark the task done before the user sends the saved
messages.
> - Send records current user intent, but its wake guard allowed only
active task states.
> - The old queue therefore remained pending with an obsolete
finalization message.
> - This change admits that exact Send receipt and reopens the task
through the issue service in the successor transaction.
> - The agent can receive the saved input once while the completed
result remains unchanged.

## Linked Issues or Issue Description

**What happened?**

Send on a saved message can leave the message queued after its native
predecessor succeeds and commits. The old wait message remains visible.
Allowing admission alone also fails: continuation construction rejects a
task that remains done.

**Expected behavior**

Explicit Send must deliver the saved input once through normal
admission. It must retain the previous run and its result.

**Steps to reproduce**

1. Save a follow-up while a native run finishes its result.
2. Let that run succeed, commit its accepted result, and mark the task
done.
3. Send the saved follow-up. Before this change, the receipt stays
deferred.

Related public work: Refs #19542. That change selects recovered
workspace files. This change handles the later saved-message admission.
Refs #19602 for the independent workflow fixture repair required by CI.

## What Changed

- Allow the exact explicit Send wake guard to accept a done task. Keep
automatic recovery and cancelled task guards unchanged.
- Reopen the task through the company-scoped issue service after
admission gates pass. Commit reopening, queue consumption and the
successor together. Publish the audit after commit.
- Add a native succeeded/committed predecessor regression with unchanged
saved work and one successor after two resume calls.
- Verify real heartbeat startup under the clicking operator. Keep
automatic input, cancelled tasks and paused agents held.
- Check workspace preflight for the prospective reopened task. Use the
normal company-scoped transition if preflight blocks a done task, so its
completion metadata is cleared.
- Check a successful native predecessor for its committed accepted
result, current ownership and pending cleanup. Keep approvals and
questions effective even without a recovery action.
- Document the saved Send contract and update the queue test dependency.

## Verification

- Final merge qualification for
`675914f0fa9b5eb1d2c9c8fcd448e0669d0c4836`: all 56 applicable status
checks pass, with no pending or failed checks. [Final
CI](https://github.com/paperclipai/paperclip/actions/runs/42307623559)
includes typecheck, build, all applicable test and E2E shards, and
aggregate verification. Current-head Greptile is 5/5; all five review
threads are resolved. Any paused or queued application review is not
claimed as a new completed review.

- Final base qualification at
`675914f0fa9b5eb1d2c9c8fcd448e0669d0c4836`: official preflight passes
(1.5s); all six integrated model-normalization cases pass (19.07s); both
affected test typecheck layers pass. The integration changes no
production server/shared/Runner/adapter inputs, so the preceding 12-case
Send proof, two ordinary status guards, and unchanged production
typecheck layers remain applicable. Fresh final-head CI supplies broad
coverage.

- New review regression: both failed and cancelled native predecessors
on a task manually marked Done fail before the repair with
`continuation_task_ownership_changed` through real
`resumeQueuedCommentInterrupt` admission. At
`bfb0eff7941090ac3ac43ce4366ba2e3d46612e9`, all 12 affected
Send/source/cleanup/workspace/decision cases pass (246.80s), ordinary
Done/cancelled rejection cases pass (2; 100.31s), and all seven server
typecheck layers pass. History validation uses the prospective reopened
status only for an already-verified explicit native Send. No status is
changed during a dry run.
- Prior `e64e4bb1` CI passed the affected serialized server suites,
including the complete saved-message route suite, typecheck and build.
General server shard 4 still failed two unrelated stale default-model
expectations (`gpt-5.6-sol` versus the new `gpt-6.1-sol` default). The
equivalent repair has already merged in #19610 as
`8621bcf53ee2e4bbefb7d193add42dd544ca06e8`; the separately prepared
#19645 is closed as superseded. This source fix does not weaken or edit
those assertions.

- Original RED: the committed-source and completed-task startup cases
left the saved receipt deferred.
- Review RED: Done plus an unrunnable isolated worktree created one
successor instead of zero. A successful committed predecessor with
pending lease cleanup also created one instead of zero. The new
Done-to-blocked path retained stale completion time. Pending approvals
and questions each allowed a successor. All failures were captured
before their respective repairs.
- Integrated production revision
`99018264dd1ef002ff3500378184bcd167d9206b`: 417 affected cases pass
across the complete native continuation, responsible-user startup, and
workspace preflight suites (386 + 18 + 13). These include the original
successful startup case and six cleanup/finalization faults that hold
the exact saved receipt until settlement, then deliver it once.
- `pnpm --filter @paperclipai/server typecheck` passes all seven layers
on that integrated head, including the local Runner/SDK dependency
build. Module-boundary, whitespace, and added-code-comment checks pass.
- Normal master integrations preserve branch history. No force push or
assertion weakening was used. Fresh CI and automated review are running
on `675914f0fa9b5eb1d2c9c8fcd448e0669d0c4836`, which normally integrates
the already-merged #19610 fixture repair after the reproduced inherited
CI failure.
- The earlier CI attempt failed in five unchanged workflow fixture cases
because IMAGE_ONLY was unset. The merged #19602 repairs that fixture. A
later inherited duplicate default in that independent fixture has a
separate repair; this PR does not edit it.
- Follow-up route-fixture RED: three existing native queue delivery
cases failed because their fixture marked a run successful without an
accepted result or committed finalization. The same three cases pass
after the fixture records the complete native success contract (42.08s);
delivery assertions and production gates are unchanged. The affected
test-tree TypeScript layer also passes. The full route run passed all
119 assertions but failed its 30-second database teardown hook, so it is
not recorded as a suite pass. That result is retained. One unchanged
bounded rerun was stopped after more than 15 minutes without a final
verdict; it is inconclusive, not a pass.
- Final integrated head `e64e4bb1`: all 13 focused route and
completed-task admission cases pass across two real-PostgreSQL suites
(188.95s), including the three repaired route fixtures and every new
cleanup/finalization/decision hold. Fresh preflight passes; all seven
server typecheck layers pass. Required final CI supplies the broader
route and server coverage.
- These tests use real PostgreSQL and normal admission, cleanup, queue
consumption, and startup services. The startup suite controls the
provider boundary. Hosted provider acceptance remains pending normal
deployment.

## Risks

- Explicit Send can reopen a done task. This is limited to its validated
saved receipt and current assignee. A cancelled task remains held.
- Reopening uses the existing company-scoped issue transition and shares
the successor transaction. A failed admission does not reopen the task.
Provider Stop, workspace, approval, pause and budget checks retain their
existing owners.
- Cleanup and pending decisions retain the done task and saved receipt.
An unrunnable workspace uses the existing blocked-task diagnostic. No
schema or runtime package changes.

## Model Used

- OpenAI Codex, GPT-6 family; exact serving snapshot/context window not
exposed; repository analysis, code editing, tool execution.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-06 17:15:07 -06:00
DottaandPaperclip 5d25117ffa fix(heartbeat): recover deferred dependency completion wakes (#19457)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Tasks wait for other tasks through saved dependency edges and wake
requests.
> - A dependency can finish while its assignee answers a question about
the blocked task.
> - Paperclip saves the completion wake behind that active turn.
> - Recovery did not find that saved wake unless it also contained a
comment or an interaction response.
> - This pull request restores that wake through the existing release
and dispatch checks.
> - The task can then continue after the active turn and its cleanup
finish.

## Linked Issues or Issue Description

**What happened?**

A task stayed blocked after its dependency finished. The completion wake
was saved while an audit turn was active. The wake stayed deferred after
that turn ended. It had no comment or interaction response, so both
recovery queries and the input guard excluded it.

**Expected behavior**

Recover the saved dependency wake when the prior turn and its cleanup
finish. Start one dependency continuation under the current execution
rules.

**Steps to reproduce**

1. Run a question response on a dependency-blocked task.
2. Finish the dependency while the response is active.
3. Save the completion wake behind that response.
4. Finish the response and its environment cleanup, or restart the
workers.
5. Observe that the saved wake has no run.

**Paperclip version or commit**

Reproduced against `70d23612dd`. Rechecked against `2f35eb1080` with the
final regression fixture.

**Deployment mode**

Source checkout on Linux x64, Node 25.9.0, pnpm 9.15.4, and isolated
embedded PostgreSQL.

Related work: #16673 added recovery for saved messages. #17288 and
#16966 address assignment wakes after cleanup. This change covers
dependency completion receipts with no message.

## What Changed

- Include saved `issue_blockers_resolved` receipts in worker
reconstruction and stranded queue selection.
- Let these receipts pass the input guard without a comment or
interaction response.
- Use the existing release transaction and dispatch checks. Add no
timer, migration, or direct task status change.
- Add process-backed regression cases for restart, cleanup release,
cancellation, agent pause, pending cleanup, and unresolved blockers.
- Update the dependency wake recovery document.

- Share the dependency-wake payload predicate and SQL fragment across
reconstruction and stranded receipt admission, so these eligibility
checks have one owner.

## Verification

- The final regression fails on the base code: the receipt stays
`deferred_issue_execution` and has no successor. The same test passes
with the fix.
- Six focused cases pass. They use real PostgreSQL and a real process
adapter. They check saved output, one dependency continuation, clean
task locks, repeat recovery, and execution gates. They do not call a
model provider.
- Three nearby suites pass: 125 tests across queue wiring, dependency
scheduling, and dependency recovery.
- Final-head server layered typechecking passes with
`PAPERCLIP_TYPECHECK_LOW_MEMORY=1`. Whitespace and module boundary
checks pass. Two parallel checker attempts reached the sandbox memory
limit; the completed low-memory check covers all source and test layers.
- The full deferred-receipt suite passes: 45 tests. Combined with the
nearby suites, 170 local tests pass. These results cover head
`8f9d3aa6ac19a6d2532bd869eb8adda7cf122a5a`. Required CI remains in
progress.
- Local workspace typechecking and build stop at the Runner Rust step
because Cargo is absent. The full local test suite was not run. Required
CI must supply broad coverage.
- The hosted incident has not been recovered or deployed from this
branch.

- Review follow-up at `182385e9bc433adac06440997de7e4cfbf889a72`: normal
merge of master `0d03610d2f73b7cd799547e43929bb2303319024`; no conflict
or history rewrite. All 54 receipt/helper cases pass on macOS arm64,
Node 26.4.0, real embedded PostgreSQL and process adapters. The six
dependency continuation and safety cases also pass separately. Module
boundaries and whitespace checks pass. No assertion, timeout, execution
gate or retry policy changed for this extraction.
- Current shared, SDK and adapter-utils source builds pass. The first
broad local server typecheck read stale borrowed adapter declarations;
rebuilding them exposed nominal type duplication between the borrowed
workspace and this checkout. It is not counted as a server typecheck
pass. All 30 SDK and 169 adapter runtime JavaScript outputs match the
previously tested artifacts. Final revision
`182385e9bc433adac06440997de7e4cfbf889a72` now passes all 55 applicable
CI checks (three skipped, one neutral review), including clean-workspace
typecheck, build and broad tests. [CI
result](https://github.com/paperclipai/paperclip/actions/runs/42262173960).
Greptile and Paperclip review both give 5/5 with no open findings.

## Risks

- Recovery now considers a saved dependency receipt with no message.
Current ownership, source finalization, cleanup, pause, cancellation,
and dependency checks still control execution.
- The scan remains bounded and uses existing transaction notifications
and restart reconstruction. The integration checks verify that it
becomes quiet after settlement.

## Model Used

- OpenAI Codex, based on GPT-6. The exact provider model ID and context
size are not exposed in this session. Used reasoning, tool calls,
TypeScript edits, and test execution.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-06 11:49:38 -06:00
DottaandClaude Opus 5.5 8c578668b8 fix(heartbeat): start new queued runs promptly after restart and name the wait (#19431)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - The heartbeat queue starts queued agent turns. Restarts and deploys
happen often.
> - After a restart, new queued turns waited minutes before they
started. The task showed only "Queued", with no reason.
> - The cause is startup order. The queued-run dispatch worker registers
only after many unrelated first passes finish one after another: tool
reviews, delivery workers, the terminal workspace sweep, native restart
recovery, and residual and issue recovery.
> - The server binds its listener before this recovery, and
`/api/health` answers during it. A deployment can route traffic to the
new server for minutes before queued work starts.
> - This pull request starts queued turns that never executed as soon as
plugin workers and adapters are loaded. It also names the wait while the
server starts, recovers, or shuts down.
> - The benefit is that tasks resume quickly after a restart and show a
visible reason while they wait.

## Linked Issues or Issue Description

**What happened?**
On a hosted instance, the server restarted twice for deploys. Both
times, queued runs on idle agents started about 3.5 to 4 minutes after
the restart. Before the restart, the runs also waited about 5 minutes
while the deploy drained the old server. During the wait after the
restart, the execution presentation showed `phase: queued`, `label:
"Queued"`, `cause: null`.

**Expected behavior**
Queued work resumes automatically and quickly after a restart. While it
waits, the task shows a reason.

**Steps to reproduce**
1. Start a task drain (`POST /api/instance/task-drain`). Assign issues
to idle agents. The runs stay queued.
2. Stop the server (SIGTERM) and start it again.
3. Make any startup first pass slow (a large instance does this
naturally). Queued runs start only after every earlier startup pass
finishes.

**Paperclip version or commit**
master at 7e3caa7bac.

**Deployment mode**
Hosted Railway deployment with fleet deploy drain. Reproduced locally
with embedded PostgreSQL and an injected 20-second startup step.

## What Changed

- `heartbeat/queue.ts`: add `resumeFreshQueuedRunsAtStartup`. It starts
queued runs on agents with no run left `running` and no queued retry or
continuation (`started_at`, `retry_of_run_id`,
`process_loss_retry_count`, `continuation_attempt`). Every run still
passes the ordinary per-agent claim and dispatch gates, and scheduling
suppression (including the task drain) still applies.
- `heartbeat.ts`: expose it. Count it as a pending wake, like
`resumeQueuedRunsAfterDrain`, so drain status and upgrade readiness see
it.
- `index.ts`: run that pass at startup after plugin workers and external
adapters load. It does not wait for the unrelated startup first passes.
It skips while a drain, warm standby, or shutdown is active. Log when it
completes and when the full queued-run pass completes, with process
uptime, so a hosted restart shows both timings.
- `execution-projection.ts`: while the server is `starting`,
`recovering`, or `draining` (shutdown), a queued run shows **Waiting for
server restart** (cause `server_restarting`) with a next action. A task
drain keeps its **Waiting for maintenance** reason.
- `doc/execution-semantics.md`: describe the startup fast path and the
new presentation.
- The full queued-run pass, its position after native restart recovery,
and the drain behavior are unchanged.

## Verification

- Red, then green, local restart with a 20-second injected startup step
(embedded PostgreSQL, three process agents, runs queued under a task
drain, SIGTERM, restart):
- Before: the listener bound at 09:41:50.6. Runs started at 09:42:10.8,
20.2 s later, after the slow step ended.
- After: runs started 0.2 to 0.3 s after the listener bound, while the
slow step still ran. Each original run executed once.
- During the before run, `GET /api/issues/:id/execution` showed `Waiting
for server restart` / `server_restarting` until dispatch.
- Red, then green: `execution-projection.test.ts` restart-phase cases
failed on the old code (`label: "Queued"`, `cause: null`) and pass now.
- New `heartbeat-startup-fresh-dispatch.test.ts` (real PostgreSQL): a
fresh run starts; an agent with a `running` row from the previous
process and an agent with a queued retry stay queued; nothing starts
while a task drain is active.
- `npx vitest run` for the new test, `heartbeat-task-drain*.test.ts`,
`execution-projection*.test.ts`, `startup-recovery-timing.test.ts`,
`heartbeat/queue.test.ts`, `liveness.test.ts`: 132 passed.
- `npx tsc --noEmit -p server/tsconfig.json` passed.

## Risks

- New queued runs can start before native restart recovery finishes. The
fast path excludes any agent with a `running` row or a queued retry or
continuation, and the claim checks still enforce issue ownership,
predecessor cleanup, budgets, pauses, and concurrency. A new wakeup
during startup already starts runs at this point, so this adds no new
class of early execution.
- The drain is unchanged. It still holds new runs while the deploy waits
for in-flight runs (the Cloud wait budget is at most 5 minutes). This PR
does not change Cloud.
- The new label depends on the process-local startup phase. It shows
only on the process that is restarting.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with
tool use (shell, file edits, local server runs). Extended reasoning
enabled.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-06 04:00:42 -06:00
DottaandClaude Opus 5.5 140fcf98ed fix(retry): name a declined task Retry and let a new click replace it (#19426)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - A task interrupted by a restart or deploy must resume automatically,
or offer a Retry that works on first use
> - A board Retry saves an intent first. Dispatch then rechecks the
requester's authority and saved source before it starts a run
> - When that recheck refused the intent, dispatch returned a bare
"deferred". The intent stayed saved with no reason, and the task still
showed Retry
> - Each later click with a new key joined that same intent, so Retry
returned 202 and never started a run
> - This pull request names the refusal on the intent and lets a new
click replace an intent that can never start
> - The benefit is that a Retry button that is shown starts one run, or
explains why it cannot

## Linked Issues or Issue Description

**What happened?**
A native task in a managed sandbox lost its runner twice. Saved-work
recovery recovered the files. The task showed "Saved work recovered.
Retry or send a message to continue." and `canRetry: true`. A Retry
click returned 202 and logged `issue.retry_requested`, but no run
started. A second click with a new idempotency key returned the same
request ID and `state: failed`. No run started.

**Expected behavior**
If Retry is offered, a click starts exactly one run. If the Retry cannot
start, the task names the reason, and a later click is a fresh attempt.
A Retry accepted during the pre-deploy drain starts after the restart.

**Steps to reproduce**
1. Recover the files of a failed native run so the hold offers Retry.
2. Save a Retry intent whose dispatch-time authority recheck fails (for
example, the requester lost access).
3. Dispatch it: no run starts, and the intent has no wait reason.
4. Click Retry again with a new key: the response returns the first
request ID, and no run starts.

**Paperclip version or commit**
Reproduced on `b400914345` (staging served `4d49a31286`; the affected
code is the same).

Related: #19399 (automatic Retry after a lost runner), #19422.

## What Changed

- `heartbeat/queue.ts`: when dispatch declines a task Retry because the
requester can no longer change the task, or its saved board message
changed, record a named wait (`retry_authority_denied`,
`retry_source_changed`) and log it. Before, it returned "deferred" with
no record.
- `task-retry.ts`: a new click with a new key replaces an unadmitted
intent that dispatch declined for its requester's access
(`retry_authority_denied`). The old intent becomes `skipped` /
`task_retry_replaced`, and activity records `replacedRequestId`. Waits
on shared state (cleanup, recovery, an active run, preservation) still
coalesce. The restart hook never replaces a user's click. Chat-owned
intents keep their own owner.
- `task-interruption-presentation.ts`: fixed public messages for the two
new wait reasons. `retry_authority_denied` keeps Retry, because a new
click is a fresh attempt. `retry_source_changed` is terminal: an edited
saved message cannot be replayed, so Retry is hidden and the user sends
a new message.
- `doc/execution-semantics.md`: document the rule.

## Verification

- New regressions in `server/src/services/workspace-recovery.test.ts`
use the real recovery, Retry and dispatch services on embedded Postgres.
The fixture runs the automatic Retry from a lost runner, then that
Retry's own run loses its runner, and recovery saves its files:
- `starts exactly one run when Retry is pressed after the automatic
Retry's own run lost its runner` (also checks that a replayed dispatch
and a second click start no second run).
- `does not let a Retry that could not start swallow a later Retry`: red
before the fix in two steps. With no fix, the declined intent has no
wait reason. With only the wait fix, the second click returned the first
request ID. Green after the fix: one run, bound to the second click.
- `dispatches a Retry accepted during the pre-deploy drain once the
restarted server resumes`: green before and after. The drain does not
lose a saved Retry.
- `npx vitest run src/services/workspace-recovery.test.ts
src/services/task-retry.test.ts
src/services/task-interruption-presentation.test.ts
src/services/quarantined-task-retry.test.ts
src/services/explicit-native-continuation.test.ts`: 892 passed.
- Not verified on staging. After deploy, an intent that dispatch refuses
shows a named `retryWait` reason.

## Risks

- Low risk. Only intents that dispatch declined for their requester's
access are replaced. All other coalescing stays.
- A replaced intent's late dispatch finds it `skipped` and starts
nothing, so a double click still starts at most one run.
- The exact gate that held the staging intent is not confirmed from
records. If it was a shared-state wait, the new code names it only if it
is one of the two reasons above.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, through Claude Code
with tool use (shell, file edits, local test runs).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-06 03:52:21 -06:00
DottaandClaude Opus 5.5 7e3caa7bac fix(tree-control): resume work a pause gate refused after release (#19421)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The board can pause an issue tree. A pause stops work. Resume or
release must continue that work once.
> - PR #19394 made release re-dispatch a run that a pause Stop
cancelled.
> - That rule covers only a run that an operator Stop ended and that the
hold snapshot named.
> - A scheduled retry that comes due during a pause is not stopped. The
dispatch gate cancels it with `issue_paused`. The release did not see it
as owed work, so the task stalled with no run.
> - This pull request makes every gate that refuses work for a pause
record the covering hold. Release then re-dispatches that work exactly
once.
> - The benefit is that a paused task with a parked retry or a queued
run continues after release, with no manual wake.

## Linked Issues or Issue Description

Refs #19394

**What happened?**
A child task had a `workspace_busy` scheduled retry. The board paused
the parent tree. The retry came due during the pause. The
scheduled-retry gate cancelled it with `issue_paused` ("Scheduled retry
suppressed because the issue is held by an active subtree pause hold").
The board released the hold. Four minutes later the child was still
`in_progress` with no run, no execution blocker, and no new activity.

**Expected behavior**
Release (or `mode: "resume"`) re-dispatches the refused work exactly
once. No reconciliation and no user message are necessary.
Stranded-issue recovery does not add a second run.

**Steps to reproduce**
1. Give an assigned child task a parked `workspace_busy` scheduled
retry.
2. Pause the parent tree.
3. Let the retry come due while the pause is active. The gate cancels it
with `issue_paused`.
4. Release the pause. No run starts for the child.

**Paperclip version or commit**
master at 4d49a31286 (includes #19394).

**Agent adapter(s) involved**
Not adapter-specific (core bug).

## What Changed

- `issue-tree-control.ts`: add `ISSUE_PAUSED_ERROR_CODE` and
`pauseSuppressionResult()`. A gate records `treeHoldSuppression: {
holdId, rootIssueId }` on a run that it refused for a pause.
- `findOwedPauseResume` now treats the latest run as owed when it is an
`issue_paused` cancellation under a pause hold. It uses the recorded
hold. For an unmarked run (a scheduled retry cancelled before this
change), it uses a snapshot pause that was active at cancellation. The
operator Stop rule does not change.
- Scheduled-retry gate (`run-dispatch/adapters/postgres.ts`,
`cancelSuppressedRetryInTx`): locks the pause row `FOR SHARE` and
records the covering hold. A concurrent release either sees the refusal,
or the retry sees no pause and runs normally.
- Queued-run claim gate (`heartbeat/queue.ts`): cancels with
`issue_paused` and the hold marker, after the agent start lock is
released. Before, the cancel re-entered that lock from inside it, and
the agent's queue stalled until the 30-second stale-lock timeout. After
the refusal is saved, the gate re-checks the hold and resumes the task
itself if release already finished (`resumeIfPauseAlreadyReleased`).
- Release (`issue-tree-resume.ts`, route): revisits the snapshot members
and every task with a run refused for that hold, also when `wakeAgents`
is set. This covers tasks created under the tree after the snapshot and
tasks moved out before release.
- `packages/db`: partial index
`heartbeat_runs_tree_hold_suppression_idx` (migration 0436, `CREATE
INDEX CONCURRENTLY`, registered as a top-level migration) for that
lookup.
- Docs: `doc/execution-semantics.md` (gate-refused work, race handling,
non-assignee and pre-fix scope) and `doc/DATABASE.md` (index).

## Verification

- Red before the fix, green after: `pnpm --filter @paperclipai/server
exec vitest run src/__tests__/issue-tree-pause-resume-run.test.ts` (21
tests).
- "resumes a parked retry the pause suppressed exactly once after
release / resume / legacy": before, `expected [] to have a length of 1`
(no resumed run). After, one `issue_tree_resumed` run with
`interruptedRunId` = the suppressed retry, no execution blocker, and the
task finished. `reconcileStrandedAssignedIssues` added no run during the
hold or after release.
- "resumes a queued run the claim gate refused during the hold exactly
once": before, the test timed out at 15 s (start-lock re-entry). After,
the run is cancelled with `issue_paused` and the hold marker, and
release re-dispatches it once.
- "resumes a refused retry on a task moved out of the paused tree before
release" and "... on a task outside the snapshot when release also wakes
members": review findings, one resume each.
- "leaves a due retry parked when the pause is released while the gate
refuses it": the test waits until the gate blocks on an uncommitted
release. The retry is not cancelled and runs once. Without the `FOR
SHARE` lock the gate does not wait and the test fails.
- "resumes work a gate refused after the release that should have
resumed it had finished": the late-refusal re-check resumes once, and a
repeated check does not dispatch again.
- "does not resume a paused-code cancellation that no pause hold
covered": negative case.
- Related suites pass locally: `src/__tests__/issue-tree*`,
`src/modules/run-dispatch`, `src/services/heartbeat/queue.test.ts`,
`heartbeat-dependency-scheduling`, `heartbeat-workspace-busy`, and
`packages/db` `client.test.ts`.
- I did not run a live staging check here. Staging APIs are not
reachable from this environment.

## Risks

- Migration 0436 adds a partial index on `heartbeat_runs`. It is built
concurrently and covers only cancelled runs with the marker, so it is
small.
- The scheduled-retry gate now takes a `FOR SHARE` row lock on the pause
hold before it cancels. Release updates that row, so the two serialize
briefly. Release does not lock issues or runs, so the lock order cannot
deadlock with the gate's issue-then-run locks.
- The queued-run claim gate now records `issue_paused` in place of the
generic `cancelled`. Stranded recovery already classifies `issue_paused`
as non-retryable. The pause resume owns that work, so recovery does not
add a second run.
- Scope limits (documented): a non-assignee run refused by a pause is
not replayed, the same as non-assignee wakes that admission drops during
a hold. Among pre-fix rows, only scheduled retries carry `issue_paused`,
so only those fall back to the snapshot. A pre-fix row whose hold is
already released does not self-recover; the staging task that showed
this bug needs one manual wake, or a new pause and release.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- Claude Opus 5.5 (Anthropic), model ID `claude-opus-5-5`, used through
Claude Code with tool use (shell, file edits, test execution).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-06 03:03:15 -06:00
DottaandPaperclip 6364fa7327 fix(heartbeat): wait for retry predecessor cleanup (#18989)
## Thinking Path

> - Paperclip manages agent work and preserves its task ownership.
> - Heartbeat admission controls when a queued run can start.
> - A failed run can still own workspace saving and environment cleanup.
> - Automatic recovery can transfer the task execution lock to its
queued retry before that cleanup finishes.
> - The old queue check then sees the retry itself and misses the
predecessor's remaining work.
> - This pull request checks the exact retry predecessor before claiming
the queued run.
> - Existing cleanup notifications can then resume that same run through
normal admission.

## Linked Issues or Issue Description

Refs #18898 and #18691. The first repair covers canonical connected-task
retries with a native source. The second covers live remote workspace
writers. This change covers ordinary automatic continuation when the
predecessor failed before native runtime selection. The search found no
open repair for that path.

**What happened?**

A preparation failure saved a terminal legacy run row while its remote
workspace save and environment cleanup were still active. Generic
continuation created one queued successor and moved the task execution
lock to it. The queue checked that current lock but did not check the
successor's predecessor. The new run started and failed at the existing
unfinished-writer guard.

**Expected behavior**

Keep that same successor queued until its exact predecessor finishes
execution and cleanup. Check company, agent and task identity before
using retry provenance as a wait condition. Preserve Stop, reassignment,
failed cleanup and independent recovery gates.

**Steps to reproduce**

1. Save a failed legacy preparation run with an active environment
lease.
2. Queue its ordinary automatic continuation and bind the task execution
lock to the successor.
3. Claim the queued run before the predecessor finishes cleanup.
4. The old code starts the successor. The fixed code retains it in the
queue.
5. Commit successful cleanup through the existing cleanup owner. The
ordinary dispatcher starts that same run once.

**Paperclip version or commit**

The causal regression fails on master
`86814c6550f52e99ede150a883bdc773cbb540e3`.

**Deployment mode**

Source checkout on macOS arm64 with disposable PostgreSQL, the assembled
heartbeat service and the production work coordinator. The adapter
boundary is controlled. No hosted provider replay or deployment is
claimed.

## What Changed

- Check the current task execution owner and the retry's exact
predecessor under the existing task claim lock.
- Use the saved native task binding, ordinary task binding and
historical context fallback in that order. Ignore unrelated retry
provenance.
- Reuse the existing live-executor and pending-cleanup checks. Reuse
committed cleanup notifications and the existing dispatcher.
- Add real PostgreSQL claim controls and assembled cleanup-event
acceptance. Keep the original source failure, saved files and current
task ownership intact.
- Document the queued predecessor-cleanup rule.

## Verification

- RED: the unchanged queue claimed the successor and wrote a new
controller lease while its legacy predecessor retained an active remote
environment lease. The regression expected the successor to remain
queued.
- GREEN: the same regression passes after the change. The complete queue
suite passes all 71 tests.
- The assembled heartbeat suite passes all six tests. The added cases
cover one continuation after committed cleanup, saved-file reuse, final
task lock release, board Stop, reassignment and failed cleanup.
- Scope controls cover a deleted source after scan, another company,
another task, another agent, canonical native task binding and the
existing current-owner hold. A failed cleanup and a still-live local
executor retain the wait.
- Node 24.19.0 and pnpm 9.15.4. Module boundaries and `git diff --check`
pass.
- Initial fixture attempts failed on database constraints and observer
timing. The final fixtures use valid immutable bindings, the board Stop
attribution and a completed real dispatcher call after reading the exact
committed lease state. Production ownership guards were retained
throughout.
- Full low-memory repository typecheck passed at `5cddb49322`. The sync
to master `04a24f4e06` adds only the independent retained-allocation
test fixture from #18984; production code is unchanged.
- Full `pnpm build` passes on current head
`c7c2bcf08ffd05be5ce714683ae1dcfe6f5b49f1`.
- The post-sync run executes all 80 behavior assertions successfully
across the queue, assembled cleanup and updated upstream retention
suites. Its queue `afterAll` then exceeds the existing 30-second
database shutdown hook. That failed suite result is retained. The
controlled post-build queue rerun passes all 71 tests with normal
teardown. The earlier shutdown cause remains undetermined. Its owned
queue-test PostgreSQL process has exited. The separate local default
`pnpm test:run` was intentionally stopped after full unfiltered CI
passed on the exact head. Four local chat partitions completed before
that stop; this is not a local full-suite pass. The verified owned
process group and its PostgreSQL fixture have exited. Logs and retained
fixture data remain available. The timeout has not been increased.
- Full unfiltered CI passes on current head
`c7c2bcf08ffd05be5ce714683ae1dcfe6f5b49f1`: all 12 server shards, all
six internal chat partitions, all nine serialized server shards, the
workspace groups, native Runner lanes, typecheck, build and browser E2E.
Both required [ci /
verify](https://github.com/paperclipai/paperclip/actions/runs/41866478617/job/126711606613)
and [ci /
e2e](https://github.com/paperclipai/paperclip/actions/runs/41866478617/job/126711263146)
pass. The file selector is skipped, so this is the full CI test matrix.
The head has 55 successful checks and three expected skipped checks. The
ready-for-review contributor trust and security scan also pass.
- Current-head Greptile is 5/5, its check is successful, and no inline
review threads remain. The ordinary review check also passes. No merge,
deployment or original task retry was performed.

## Risks

- A predecessor with unfinished cleanup keeps its successor queued. Its
existing cleanup owner remains responsible for settlement.
- A task claim reads at most one additional predecessor row. A matching
source also uses the existing ownership and cleanup queries. The change
adds no timer, schema, credential, provider or model policy.
- A committed cleanup signal only requests normal admission. Current
ownership and independent execution gates still apply.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, code editing, tool use and
PostgreSQL verification. The session does not expose a more specific
serving model ID or context-window limit.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass — focused suites pass; the
separate local full-suite attempt is explicitly incomplete above
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-04 11:16:54 -06:00
DottaandPaperclip 84e9c8f364 fix(retry): wait for admitted source cleanup before dispatch (#18898)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Connected-task Retry keeps the original request and its current
authority.
> - One durable Retry can already own a queued successor.
> - The old native environment can still have pending cleanup before
that successor starts.
> - The task execution lock points to the successor, so the old cleanup
can escape the queue claim check.
> - Dispatch then refuses the source state and fails the new run before
provider work.
> - This pull request keeps that same run queued and wakes dispatch when
cleanup changes.

## Linked Issues or Issue Description

Refs #18845, #18853, #18860, #18877, #18882 and #18932. These repairs
cover preservation binding, interrupted preparation, old native
ownership, manual native holds or other setup guards. This change covers
an already admitted connected-task Retry whose native predecessor still
owes cleanup. It uses the shared cleanup predicate so the manual-hold
repair remains with its existing owner. Search found no duplicate
queued-source cleanup repair.

**What happened?**

A board Retry saved its exact chat request and admitted one queued
successor. The source lease was still pending cleanup when that
successor reached dispatch. A retained stop receipt did not settle the
full cleanup contract. The queue checked the task's current execution
owner, which was already the successor. The native authorization guard
then rejected the predecessor state and failed the new run before
provider dispatch.

**Expected behavior**

Keep the same canonical Retry and queued run while the exact source
cleanup is pending. After authoritative settlement, submit that run
through normal dispatch once. Do not infer safe execution from a
stop-and-retain receipt alone.

**Steps to reproduce**

1. Retry an authorized connected request from a failed native run.
2. Admit one successor while capacity keeps it queued.
3. Leave or restore the source lease to pending cleanup with a matching
retained stop receipt.
4. Release capacity and resume the ordinary queue.
5. The old claim path starts the successor and the native source guard
refuses it.

**Paperclip version or commit**

Reproduced against master at `f77499283270d2e966aabd58493f9d35c6bbdf5f`.

**Deployment mode**

The regression uses the real HTTP route, chat authorization, queue
claims, disposable PostgreSQL and the production work coordinator on
macOS arm64. A controlled adapter supplies the final result. No hosted
provider replay or deployment is claimed.

## What Changed

- Validate the exact canonical Retry, chat action, company, task, agent,
source and successor before testing source cleanup.
- Keep the successor queued under the existing issue claim lock while
the shared cleanup predicate remains pending.
- Wake only the scoped queued-dispatch worker after cleanup or exact
workspace-owner release commits. Add no timer or background scan.
- Verify pending cleanup at intake, later cleanup invalidation, one
final execution, idempotency, Stop, changed input, unknown stop
receipts, a different live controller and signed sandbox absence
followed by owner release.
- Document the queued-wait contract. No schema, endpoint, credential,
model or provider policy changes are required.
- Align five native preparation acceptance fixtures with the existing
workspace publication contract. Use the real reservation and publication
owner. Retain a raw-root refusal case with no provider launch and
preserved files.

## Verification

- Latest master sync at `e26cad76b8f20ba823d702ed60e7b7294f8f5a7c`
includes master `396b7fc62a0a4b1d8aadbda8221c05879d54177c`. The shared
test helper preserves #18944's canonical retained-directory default, the
real publisher for the five fresh-workspace cases, and the explicit
raw-root refusal. Independent remerge review found no dropped upstream
behavior, guard or assertion.
- The latest head passes the focused six cases, all 580 complete
workspace/continuation tests, all 38 selected HTTP Retry cases, fresh
full recursive Node 24.22.2 types and full build. No affected tests
skipped. An initial cached test-layer attempt read old budget
declarations; regenerating them resolved all seven errors without
test/mock or production-export changes.
- All current-head CI is green at
`e26cad76b8f20ba823d702ed60e7b7294f8f5a7c`, including required [ci /
verify](https://github.com/paperclipai/paperclip/actions/runs/41846304017/job/126636751314)
and [ci /
e2e](https://github.com/paperclipai/paperclip/actions/runs/41846304017/job/126636638086).
Greptile and Paperclip Review both rate this exact head 5/5, with no
findings or open review threads.
- Master sync at `3e4f266c2da172a84afd0b9cb4a91ea3b95f3c0d` merges
master `b891e69bd23d6dab8ce536569e15bc4a7a31c35c`. The only conflicts
were adjacent queue imports and two HTTP Retry test matrices. Both
imports and both complete matrices remain unchanged. Independent review
found no relaxed guard or assertion.
- Node 24.22.2 and pnpm 9.15.4: all 38 selected real HTTP Retry cases,
194 queue/cleanup/finalizer cases, module boundaries, recursive types
and build pass at `3e4f266c2da172a84afd0b9cb4a91ea3b95f3c0d`.
- That sync head's [server
check](https://github.com/paperclipai/paperclip/actions/runs/41838741852/job/126604742761)
failed five native acceptance cases in CI and locally with
`remote_workspace_published_path_invalid`. The test fixture supplied a
raw directory instead of a fresh publisher-generated workspace. The
guard from #18932 remains unchanged. The same five cases passed earlier
Linux CI before that guard was present.
- The test-only alignment at `dcdee1bb6c2e2e6dd494382499d17c23a3ce71a8`
obtains the saved authority, path and run reference from real
`reserveRemoteWorkspace` and `prepareRemoteWorkspace`. All five original
cases and a raw-root no-launch/no-result/files-preserved control pass.
Their native result, file, catalog and single-execution assertions
remain intact. An initial setup attempt was refused for a noncanonical
allocation root; the fixture now resolves that owned root before
publication.
- At previous fixture head `dcdee1bb6c2e2e6dd494382499d17c23a3ce71a8`,
the generated server test-layer typecheck passed. All 580 tests in the
complete workspace/continuation family pass, with no skips. That
test-only commit left production files byte-identical to the sync head.
- Previous published-head CI was green at
`dcdee1bb6c2e2e6dd494382499d17c23a3ce71a8`, including required `ci /
verify` and `ci / e2e`. The [Linux Node 24.22.2 server
shard](https://github.com/paperclipai/paperclip/actions/runs/41842665765/job/126618334638)
executed all five original acceptance cases and the new raw-root refusal
case successfully. Its whole workspace recovery file passed all 245
tests.
- Greptile reviewed previous published head
`dcdee1bb6c2e2e6dd494382499d17c23a3ce71a8` at 5/5, with no findings or
open review threads. No unchanged-job rerun was used for the reproduced
sync-head failure.
- Causal red: the real HTTP regression started and failed the successor
at the native source-state guard while cleanup remained pending. A
second red proved that signed sandbox absence followed by copyback-owner
release lacked a queued-dispatch wake.
- Green: seven HTTP/PostgreSQL cleanup cases, the exact confirmed-owner
release notification control and seven existing retry lineage controls
pass. The real coordinator resumes from committed cleanup or
workspace-owner release, without a manual queue restart. One controlled
adapter execution produces the result after settlement.
- Earlier branch verification passed full repository `pnpm -r
typecheck`, `pnpm build`, module boundaries and `git diff --check`.
- The full stale-queue file control passed all 64 cases with unchanged
observer/hook limits. The initial broader affected run had 192 passes
and one non-assignee native-owner case miss its existing five-second
adapter observer while already running with no error. The isolated case
passed; the unchanged base passed all 64 cases but hit its existing
30-second teardown timeout. Those original results are retained. The new
queue hint has no dispatch consumer in that fixture.
- Earlier-head CI was green: 54 success, three skipped and two neutral
checks at `6adb9f1ba682282c512d5e751ba2aa663f614ca2`. One chat job was
cancelled by an external runner shutdown; its single unchanged-job rerun
passed. No source was changed to obtain that result.
- Greptile and Paperclip Review both rated earlier head
`6adb9f1ba682282c512d5e751ba2aa663f614ca2` 5/5 with no findings or
unresolved threads. These results do not qualify the master-sync head.
- At initial verification, a complete local `pnpm test:run` was not
repeated while the related setup repair's full local run was active. The
full earlier-head CI suites passed. A full local suite has not been
repeated for the mechanical master sync. Local verification uses the
affected HTTP, producer, lineage and queue suites. No full local-suite
pass is claimed.
- The fresh clone's missing plugin SDK links were repaired with the
repository's own postinstall helper before verification. The embedded
PostgreSQL package's own symlink helper was also required.
- No staging task was submitted again with this repair, and no
deployment is claimed.

## Risks

- A pending source cleanup can keep the queued run waiting. Its cleanup
owner still owns reconciliation and its existing limits.
- Stop, changed source, unknown termination and live ownership retain
their existing authority checks. A cleanup notification grants no
execution authority.
- A new cleanup change after claim still faces the existing final
dispatch guard.
- Cleanup notifications can change dispatch timing in a running
controller. The real coordinator cases verify commit-bound wakeups; the
broader current queue-file control passed all 64 cases. The earlier
loaded-run and baseline teardown failures are retained in verification.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, code editing, tool use,
PostgreSQL and browser verification. This session does not expose a more
specific deployment model ID or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-04 08:33:39 -06:00
DottaandPaperclip d8c1b9d4b5 fix(runtime): reclaim failed remote checkpoint retries (#18877)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Native recovery must preserve the original execution and provider
state.
> - A failed remote run can retain its provider PID after heartbeat
releases the task execution lock.
> - Normal resumption excludes that PID, while restart recovery rejects
the released lock.
> - Recovery must reclaim that exact execution only after current
admission and durable ownership checks pass.
> - Failed retries and admission holds need separate finite budgets.
Neither can prove a provider stopped.

## Linked Issues or Issue Description

**What happened?**

A failed remote native run remains in retryable failure without a task
execution owner. Normal resumption and restart recovery both reject it
before inspecting the preserved remote provider. The current remote
workspace reference format also misses the due-retry routing path.

**Expected behavior**

A due exact-checkpoint retry reclaims its original task execution only
when current ownership and safety gates permit it. Newer task input
prevents an old claim. Lost or ambiguous provider state still prevents
replay or replacement. Ineligible recovery eventually becomes a quiet
manual reconciliation obligation.

**Steps to reproduce**

1. Start a remote native run and persist its provider checkpoint and
encrypted Runner authority.
2. Fail with exact-checkpoint recovery and a retained remote PID.
3. Release the task execution lock at heartbeat completion.
4. Run ordinary resumption and restart recovery after the retry
deadline.
5. Observe that both reject the same eligible run before remote
inspection.

**Paperclip version or commit**

Reproduced from source at `d59791828482`; integrated with upstream
`db9be4c5a6`.

**Deployment mode**

Remote workspaces with PostgreSQL. Local regressions use disposable
PostgreSQL and encrypted checkpoint persistence.

Related public repairs #18846, #18854, #18860 and #18841 cover finished
per-turn owners, pre-provider failures, unstarted follow-ups and storage
migration. They do not reclaim this failed run's released execution
lock. Merged #18879 also adds scheduled-resume lock retention and
reclaim. This PR keeps that compatibility and requires encrypted Runner
authority, canonical source ordering and a charged failed retry before
reclaim. Its scheduled-resume regression now uses a real encrypted
authority and retains a snapshot-only refusal control.

## What Changed

- Share normal admission checks and one guarded execution-binding
restore/event helper between normal and remote resumption.
- Keep agent-name normalization in a module with no imports. Preserve
heartbeat's existing export. Native admission no longer loads heartbeat
orchestration for a string key.
- Recheck company, assignment, agent eligibility, Stop, pause, approval,
dependencies, execution and checkout ownership before reclaim.
- Reject newer task input using PostgreSQL creation-time and ID
ordering, preserving timestamp precision.
- Require the recorded remote target, encrypted Runner authority, exact
checkpoint identity and existing controller fence.
- Commit task binding, controller lease, run status and recovery event
atomically. Recognize both remote workspace reference formats.
- Charge failed reattachments against the existing
three-provider-attempt budget, including retained-lock crash windows.
Active controller adoption preserves its charged attempt.
- Use the existing five-retry/30-minute system-recovery policy for
admission holds. Ended tasks and newer sources exhaust it immediately.
Preserve PID, checkpoint and task bindings, suppress resource
settlement, and assign manual reconciliation with executor stop/state
explicitly unverified.
- Register recovery intent before deadline writes; preserve live/future
deadlines quietly and roll back zero-row writes. Record changed hold
reasons once and terminal dispositions separately.
- Keep historical provider-budget exhaustion behind current
admission/source/controller/authority checks. Make an existing
orphan-cleanup fixture explicitly due.
- Include exact plugin task leases that have no workspace reference.
Reuse every reclaim and retry-budget guard, with a bounded
company/task/run lease projection.
- Share strict manual ownership proof across stale-lock cleanup,
adoption, queue release and wake admission. Require termination receipts
for every exact remote lease before normal cleanup can release either
binding.
- Preserve governing Stop through the existing audited cancellation
path. Its acknowledgement does not release an unverified provider.
Ordinary Retry can wait for exact Stop and file preservation, then queue
one continuation.

## Verification

- Current head is `5d7baf74aa89d00d7ac6e1493d38a6ce2ae7b7b5`. Its
[current CI
matrix](https://github.com/paperclipai/paperclip/actions/runs/41782198858)
is terminal and clean: 54 successful, three skipped and two neutral
contexts. Required `ci / verify` and `ci / e2e` pass. Greptile is 5/5 on
this exact head with no open findings. No fresh Paperclip 5/5 assessment
is claimed.
- The [prior complete CI
matrix](https://github.com/paperclipai/paperclip/actions/runs/41754365388)
passed on `3e641466d3edcaa6dd5021d979627082d388eb05`, with Greptile and
Paperclip both 5/5 and no open threads.
- All 233 tests across the six affected heartbeat, restart-isolation,
remote-admission, scheduled-resume and session-binding families pass on
production-identical `a5104fa89f9cb493091e000bf21ed3858871ae46` under
Node 24.22.2 and pnpm 9.15.4. They cover both workspace formats and
plugin task leases, competing controllers, exact rollback, Stop,
assignment/company boundaries, attempts, work-intent ordering, finite
backoff and quiet held state.
- The merge preserves #18931's per-run audit-failure isolation and this
PR's unchanged-transition hold. Two initial composition cases failed
because their setup or expected result described the older contract. The
rollback test now expects the exact per-run deferral while retaining
full coordinator equality and no work intent. The routine fixture writes
a real encrypted checkpoint through the normal owner before reaching the
actual routine unique constraint. No production admission guard or
rollback assertion was weakened. A separate agent reviewed this exact
merge and fixture delta without finding a blocker.
- Full recursive `pnpm -r typecheck` and `pnpm build` pass on production
merge `89c616fe45ceff75db450f67fd34224b4df7441d`. Subsequent commits
change only three test files. Both the two-file `a5104fa` and final
`5d7baf` server test-layer typechecks pass.
- Four production-identical `a5104fa` probes pass with the rebuilt
actual Rust Runner, a scripted ACPX subprocess and encrypted PostgreSQL
checkpoints under Node 24.22.2. Workspace-reference and plugin-lease
admission each cover surviving and lost providers. Replacement preserves
one provider launch, one original side effect, the charged attempt and
restored task execution binding. Lost providers reject snapshot recovery
without replacement. This is protocol-boundary evidence, not a live
Claude or hosted provisioning claim.
- Initial `a5104fa` CI found one additional routine integration fixture
missing the persisted `exact_checkpoint_resume` mode. Its encrypted
checkpoint was already present. The exact case fails locally before
repair and passes after recording that mode and expecting the charged
provider attempt. Every exact routine conflict, rollback, checkpoint,
task binding, successor-count and sibling-startup assertion remains.
Final head changes only that fixture. The correct native-server group
passes all nine files: 175 executed cases and 14 container-only skips,
matching the now-successful native-server CI gate.
- The earlier canonical HTTP Retry acceptance passed on the prior
reviewed head with real PostgreSQL, the recovery worker and real files.
Pending Stop protects both bindings and starts no successor. Exact
termination and copyback queue one preserved-workspace continuation. No
browser or live-model outcome is inferred from that test.
- The predecessor's full local `pnpm test:run` failed in an unchanged
Discord Gateway fixture with a 200 ms lease and a 422 initial ownership
error. Focused predecessor and untouched-base controls pass; that
full-run cause remains unproved. The required command was also started
on production-identical `a5104fa`. All six local chat shards passed,
covering 1,850 cases. The duplicate local invocation was interrupted
with SIGINT while the general-server group was still running after this
head's complete CI and the combined repair qualification had passed. The
wrapper exited 1 on cancellation, no process retained its test log, and
no full local pass is claimed. An earlier attempt to select the native
lane through the CI wrapper instead selected local package sharding:
2,631 cases passed and 13 failed. Those separate failures are retained
without causal attribution or unrelated source changes; that run is not
counted as native-server qualification. The direct native group and
current complete CI matrix pass.
- Live Claude Opus 5.5 continuation, hosted plugin provisioning,
deployment and recovery of historical tasks remain unverified. No
original task was retried or mutated for this verification.

## Risks

- Restoring a task binding grants remote inspection; it does not prove
that the provider survived.
- Unknown effects, lost providers and missing semantic results retain
their existing reconciliation requirements.
- Exhausted admission holds preserve execution bindings and resource
evidence for manual reconciliation. They do not authorize a fresh
executor or provider/resource release.
- The source guard is conservative: newer task input prevents recovery
of an older failed source.
- No database migration or provider profile change is required.

## Model Used

OpenAI Codex, based on GPT-6, with reasoning, tool use, code editing and
shell execution. The runtime does not expose the exact model snapshot or
context window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-04 07:18:07 -06:00
Devin FoleyandPaperclip 1a39dea9aa fix(heartbeat): keep a routine claim queued while its slot is held (#18933)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - A routine creates one task per tick. Only one open task of a routine
can hold an execution lock (`issues_open_routine_execution_uq`).
> - Since #18879, a failed native run that waits for a scheduled resume
keeps its task's lock. Routine dispatch counts only queued, running or
scheduled runs as live, so it can queue a newer task of the same routine
meanwhile.
> - When that newer run is claimed, stamping its execution lock violates
the unique index. The raw database error is not a deferrable claim
rejection, so it escapes the queue loop. The queue code notes that this
can stop the agent's queue and startup recovery.
> - This pull request turns that exact violation into a 409 claim
rejection, so the run stays queued until the slot is free.
> - The benefit is that a busy routine slot delays one run instead of
stopping the queue or startup.

## Linked Issues or Issue Description

Refs #18879 (keeps a failed run's lock while its resume is pending),
#18916 (defers the same unique-index conflict in restart recovery's lock
reclaim) and #18931 (open; keeps one run's restart-recovery failure from
stopping startup recovery). This is the same index conflict on a
different path: the heartbeat queue claim, not restart recovery. It does
not change #18916 or #18931. Its doc paragraph is separate from the one
#18931 edits.

**What happened?**

While auditing the lock paths from #18879 for this index, I found that a
queued run of a newer routine task can be claimed while an older task of
the same routine still holds the slot through a failed run with a
pending resume. The claim's lock stamp then raises `duplicate key value
violates unique constraint "issues_open_routine_execution_uq"`.
`isDeferrableClaimRejection` accepts only `HttpError` 4xx, so the error
escapes `startNextQueuedRunForAgent`.

**Expected behavior**

The claim is rejected as a conflict and rolls back. The run stays queued
and is claimed after the older task releases the slot. Other errors
behave as before.

**Steps to reproduce**

1. Create two open tasks of the same routine (same origin and
fingerprint).
2. Give the older task an execution lock held by a failed run.
3. Queue a run for the newer task and claim it. On `master` the claim
throws the unique violation.

The new queue test runs these steps against PostgreSQL.

**Paperclip version or commit**

`master` at `0dedbf23c35`.

**Deployment mode**

Any server with routines whose tasks run on native runners.

## What Changed

- `bindClaimedIssueExecution` in
`server/src/services/heartbeat/queue.ts`: if stamping the execution lock
violates `issues_open_routine_execution_uq`, it throws
`conflict("Another execution for this routine is already in progress")`.
The claim transaction rolls back, and the queue loop keeps the run
queued as it does for other 4xx claim rejections. Every other error is
rethrown unchanged. The issue checkout route already maps this violation
to the same 409.
- `doc/execution-semantics.md`: one paragraph on the behavior.

## Verification

- Failing first: `queue.test.ts` "keeps a claim queued while another
task of its routine holds the execution slot". On `master` the claim
raised the `issues_open_routine_execution_uq` violation. Now it rejects
with 409, the run stays `queued`, neither task's lock changes, and
nothing executes.
- Failing first, review round 1:
`heartbeat-queued-run-claim-isolation.test.ts` "keeps a routine run
queued while another task holds the routine slot, then runs it once the
slot is free" goes through `resumeQueuedRuns`. On `master` it rejected
with the unique violation. Now the routine run stays queued with no
error code while another queued run for the same agent executes. After
the slot is released, the routine run executes exactly once (executions
are counted per run, because the finished task can queue its own
follow-up run).
- `cd server && npx vitest run src/services/heartbeat/queue.test.ts
src/__tests__/heartbeat-queued-run-claim-isolation.test.ts`: 70 passed.
- `npx vitest run src/services/heartbeat/recovery.test.ts
src/__tests__/routines*.test.ts`: 4 files, 205 passed.
- `pnpm --filter @paperclipai/server typecheck`: pass.
- Not verified: the queue loop end to end on a real instance. The loop's
handling of a 4xx claim rejection is existing behavior.

## Risks

- While the older task holds the slot, the newer run stays queued and
the loop logs "queued heartbeat run claim was rejected" on each pass. It
is claimed once the older task's resume finishes or its lock is
released.
- Only this one constraint is mapped. Other database errors still escape
as before.
- No schema migration.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`) through Claude Code, with tool use
(shell, file edits, test runs). The runtime does not expose the context
window or reasoning configuration.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [ ] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-03 21:33:00 -08:00
DottaandPaperclip f187de99aa Preserve domain deadlines across owned idle sleep (#18656)
Reviewed and verified at 9b4acc456d.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-11-03 15:40:56 -06:00
DottaandPaperclip 367f29478d fix(recovery): preserve the bound remote writer before continuation (#18803)
## Thinking Path

> - Paperclip manages agent work and preserves task files.
> - A remote workspace records the exact run that owns its unsaved
files.
> - A later setup failure can become the latest task run without owning
those files.
> - Retry only inspected that latest run, so the original writer had no
file-recovery owner.
> - A released reusable source also failed the legacy retention rule.
> - This change registers the bound writer, saves its files, and then
admits the saved user request once.
> - Existing stop, ownership, approval and execution-evidence checks
remain effective.

## Linked Issues or Issue Description

**What happened?**

A native run prepared a remote workspace and failed before finalization.
Its sandbox stopped with a dedicated stop receipt. The workspace stayed
dirty and retained that run as its writer. A later setup failure became
the latest task run. Retry inspected the newer run and left the original
file obligation unregistered. New attempts failed at the writer fence.

Registration alone was insufficient. After file recovery, continuation
still required the Retry source to be one of the older recovery sources.
A newer pre-provider failure did not satisfy that check. Workspace
selection could also choose a fresh directory instead of the recovered
files.

**Expected behavior**

Find the writer through the task's current workspace binding. Register
only its exact prepared source. Preserve the released lease and its stop
receipts. Save the files before continuation. Independently prove that a
newer setup failure never dispatched work. Select the verified saved
workspace and admit the Retry once.

**Steps to reproduce**

1. Fail a native run with a prepared remote workspace and a released
reusable sandbox.
2. Keep matching dedicated stop receipts and the workspace's dirty
writer authority.
3. Record a newer pre-provider setup failure for the same task.
4. Request Retry. Before the fix, no file-maintenance record owns the
actual writer.

**Paperclip version or commit**

Reproduced before production edits on master `f7ad1dc7ca`. The branch
was rebased on master `adb49a44346849e751548b2fb640693dbfad4b6f`.

**Deployment mode**

Authenticated hosted execution with Paperclip Runner and remote
workspace storage.

Companion: #18798 (now merged upstream) fixes a pre-existing inbox test
synchronization race. Its test-only commit
`110aa88489cad926a451c972ad731ede469347c1` is cherry-picked here with
attribution so this PR can run the complete CI matrix.

Related: #17800 registers missing preservation for the selected source
run. #18678 holds unfinished remote exports. #18718 repairs a prior
warm-controller projection failure. #17916 addresses a separate legacy
warm-copyback policy case.

## What Changed

- Discover the failed writer through the company-scoped task/workspace
binding during Retry and authenticated message admission.
- Reuse the exact prepared-source validator for released remote
workspaces. Registration changes neither the lease policy nor its stop
receipts. Physical recovery retains its full allocation checks.
- Check a newer failed preparation separately before allowing an older,
repaired source to release continuation. Provider events, leases,
results and execution ownership remain disqualifying evidence.
- Select the bound saved workspace through the continuation's verified
repair receipt.
- Add PostgreSQL safety cases and an HTTP Retry workflow with real file
capture and saved-copy reads. Document the execution contract.
- Reuse #18798's completion barrier for the existing inbox cancellation
test; preserve its eight-slot limit, rejection and coalescing
assertions.

## Verification

- RED before production edits: the exact stopped writer has no
`workspaceRestoreRecovery` after Retry. Six unsafe-source controls pass
on the baseline.
- GREEN: the expanded Retry/message/preview selection passes 17 cases.
All 627 tests in the five affected recovery suites pass on recovery
commit `b572304f772d236b8a8bdf095e13e651d808f41c`, including Stop,
ownership, saved messages and duplicate Retry.
- The HTTP workflow registers maintenance, keeps execution held before
save, reads back the saved file bytes, and admits exactly one
continuation with `resume_preserved_workspace`. A registration-only
repair first failed after save because it did not reconcile the newer
Retry source. The incident-shaped pair passes with an independent active
stranded-task action present.
- Greptile identified the path where the newer setup failure already
owns a reconciliation hold. Its new regression failed before the
correction (saved files, zero queued continuations); the
contradictory-dispatch control passed. All four HTTP variants pass after
the correction, covering both hold shapes and both dispatch-evidence
controls.
- Repository typecheck and build passed. Server typecheck and build also
passed after the recovery changes. Module-boundary and whitespace checks
pass.
- The full local Vitest command failed in the GitHub fast-response
acknowledgement test (`delivery_unknown`: one response write instead of
zero). That isolated case passes on this branch and unchanged master;
the original full-run cause remains unestablished. A sibling run passed
199 test cases but timed out in workspace-suite database cleanup.
Unchanged master also passed all 126 workspace cases and timed out in
the same cleanup hook; all five acknowledgement outcomes passed in that
baseline comparison. These local failures remain recorded rather than
being reported as suite passes.
- The first hosted matrix failed the pre-existing inbox cancellation
assertion (expected nine computes, saw eight). The same assertion failed
in [master
CI](https://github.com/paperclipai/paperclip/actions/runs/41664339150/job/126015526840)
and reproduced locally before applying #18798's existing repair. All six
inbox HTTP/database cases pass after that repair. Final head
`7f2fafcbace74cb1ad8ea68c8375a69b42ed30d9` adds only that attributed
test change to the verified recovery code.
- [Final hosted
CI](https://github.com/paperclipai/paperclip/actions/runs/41677310377)
passes on head `7f2fafcbace74cb1ad8ea68c8375a69b42ed30d9`, including `ci
/ verify`, `ci / e2e`, typecheck, build, every server/chat/workspace
group, Runner checks and all eight browser shards. There are 54
successful check results, two informational neutral results and three
skipped results, with no pending or failing results.
- Greptile and the Paperclip reviewer both report 5/5 for that final
head; no review threads remain open. The Paperclip review check is
informational (`neutral`) and records its local-testing limitations.
- The file workflow uses real PostgreSQL, subprocess file capture,
encrypted saved objects and production recovery code. Provider
resume/stop calls are simulated at the environment driver boundary. This
does not prove a live Daytona or Codex recovery. No deployment or
original-task retry is claimed.

## Risks

- File-maintenance discovery must not authorize another executor.
Existing writer, coordinator and physical allocation checks still own
that decision.
- A false bootstrap summary cannot prove that a newer run never
executed. The new path also requires its immutable native-adapter claim,
unresolved preparation state, absent
coordinator/process/session/lease/result evidence, and no dispatch
events.
- Additional database reads run only during explicit task admission or
Retry strategy selection. They are company/task scoped and add no
polling loop. The saved-writer query returns one matching snapshot and
omits prompt bodies.
- No schema, credential, provider profile or deployment setting changes.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, repository inspection, code
execution and test tools. The runtime does not expose the exact serving
model ID or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-03 11:25:24 -06:00
DottaandPaperclip 27d35314be feat: connect experimental Cursor Cloud to native Runner (#18069)
## Thinking Path

> - Paperclip helps people manage AI agents at work.
> - Native Runner owns execution and task authority.
> - Operators need an explicit native Cursor Cloud choice.
> - Tools/files need company, task, session and run scope.
> - This connects setup and lifecycle to Runner Core.
> - Legacy agents retain their selected runtime/history.

## Linked Issues or Issue Description

Depends on #18068. Managed-only API placement and API-owned Stop
containment are in #18310. Refs #5664, #11803, #17299, and #17471. No
duplicate native integration was found.

## What Changed

- Add explicit native setup, Test, saved settings and dispatch with
no-prompt account/catalog/callback checks.
- Scope MCP to company, agent, task, session and run through
authenticated HTTPS. Register verified artifacts/work products; preserve
unpriced accounting, completion and budgets.
- Connect Question/Plan continuation, cold handoff and admitted fresh
sessions; recheck waiting admission under the task lock.
- Present audited Stop intent while preserving physical containment
proof; bound typed Stop metadata. Preserve title edits through
preference/navigation readiness.
- Select one live/history representation per run to prevent duplicate
settled cards. Integrate upstream task/read-state/retry/schema contracts
and repair two test fixtures.

## Verification

Core #18068 merged normally as `3910352c923a`. Product head
`5a60f541c982` has passing repository CI/build/browser checks, including
required `ci / verify` and `ci / e2e`, plus a fresh exact-head Greptile
5/5 review with zero unresolved threads. Two non-required external app
checks remain pending: Paperclip Review is queued waiting for its
assigned agent; Superagent Security Scan is reviewing the diff. These
are not claimed completed. The normal merge endpoint enforces the
repository rules; no policy or status override is used. The dependent
Top PR is addressing its fresh deferred-Stop review finding.

Product `5a60f541c982` passed 270 UI and 20 selected
Cloud/native/disk-full tests, UI/server typechecks, tokens and maps.
Top’s clean normal merge passed tokens/maps/diff checks; its matrix is
pending. Earlier receipts retain Core’s 47 Rust, 4 compiled-native
retirement and 19 settlement controls, normal Runner build, and runtime
9af build/recursive typecheck. Reproduced loading/shutdown CI fixture
failures passed 7/7 browser and 121/121 unit tests, including a
broken-unsubscribe negative control. No timeout/oracle was relaxed.

The actual-parent restack adopts 75 mainline paths, including
schema/permission and generic runtime changes, beyond the prior two
fixture repairs and client projection fix. The full difference from
hosted `9af1a5de42a2` is therefore larger than four files; backend
source also differs. The merged config-read checks match Core391, and
the Cursor placement/runtime/relay/selection modules match frozen9af;
selected affected regressions pass. Paid proof keeps its actual 9af
source/image identity. The separately tested live/history card fix is
not claimed deployed on that host.

On 9af, original saved settings survived reopening and fresh no-prompt
Test authenticated catalog/model/binding; no new Save is claimed. Fresh
Linux admission passed. With `claude-sonnet-4-5`, Artifact downloaded
exact 27 bytes and matched 121 canonical identities in complete
S3-served history. First Stop’s strict quiet FAILED on a 10.373-second
gap despite independent cancellation/no late artifact. One targeted
unchanged-sampler retry retained all 24 samples: 35.076 seconds quiet /
maximum gap 4.584 seconds, 67 ordered canonical identities, and separate
CANCELLED/artifact-absent status after the original 180-second deadline.
The pre-reload duplicate settled card is disclosed. Exact-ID cleanup for
the three new provider agents is awaiting authorization, so full grades
and the fresh Artifact’s post-cleanup download remain blocked. A
historical deleted-provider artifact was newly downloaded on 9af;
original F226 Question/Plan/reconnect and cleanup proof keep their
identities.

Retained failures: stale fixture 132/133; E8 48/135 with 87 reset-hook
failures; Mac 17 SQL failures/skips; earlier
title/startup/custody/Stop/deletion failures with unknown causes/bounded
recoveries; `dea023` Stop’s warning/50 duplicate identities; pre-repair
ACK and original Core CI failures. WSP’s 251-assertion, 7/8-suite
attempt failed physical PostgreSQL teardown; the unchanged wrapper rerun
passed 128. Retry alone establishes no cause or full local-suite pass.
All paid attempts remain recorded; vendor dollar cost is UNKNOWN.

## Risks

Experimental: Cursor independently acknowledges neither the effective
model nor instruction digest before the first prompt. Explicit values
are submitted and checked through behavior; unpriced provider dollar
cost stays UNKNOWN.

Callbacks need authenticated reachable HTTPS. Scope, revocation,
budgets, completion and cleanup remain authoritative. Operator Stop
intent is separate from physical containment. Saved legacy agents retain
their selected runtime. Prior shared title-save/deletion failures remain
disclosed.

## Model Used

OpenAI Codex, GPT-6 family, assisted with reasoning, repository tools,
code execution, browser verification, and delegated code review. The
serving model’s exact API ID and context window are not exposed. No
value is inferred from the model catalog.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used and the limits of available model
metadata
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have linked public issues or described the issue in this PR
- [x] I have not referenced internal or instance-local Paperclip issues
or links
- [x] My branch describes the change and contains no internal ticket ID
- [x] I have run the scoped local tests reported above; pending gates
are stated separately
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation
- [x] I have considered and documented the risks
- [x] All required CI gates pass on the current head
- [x] Fresh Greptile is 5/5 with no unresolved findings on the current
head
- [x] I will address all reviewer comments before requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-03 09:01:39 -06:00
DottaandPaperclip b4a66027b7 fix(server): deliver chat completions after nested workspace saves (#18665)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Agent Chat returns completed worker tasks to the original
conversation.
> - Delivery must retain its wake receipt when execution gates refuse
admission.
> - A workspace save can contain a nested snapshot operation.
> - The old checks lost the receipt and treated that saved snapshot as
unfinished work.
> - This pull request preserves the receipt and recognizes a successful
owning save.
> - The benefit is that completed work can reach the chat through the
normal queue.

## Linked Issues or Issue Description

Refs #18652. Related: #17206 covers failed finalize recovery. This
repair handles a successful finalize with an enclosed snapshot and does
not change failed-save recovery policy.

**What happened?**

A delegated worker finished and saved its result. The original chat
received no update. The dependency gate compared operation start times.
A nested snapshot started after its enclosing finalize and therefore
left a permanent hold. The completion wake also lost its exact
idempotency receipt when the queue merged a refused wake into a generic
dependency wait. The outbox reported `Completion wake returned no run or
durable receipt`.

**Expected behavior**

A successful finalize covers a completed operation enclosed by that save
when company, workspace, issue, and run match. Completion wakes that
disable coalescing keep their own durable receipt even when admission
waits. Dependency, budget, Stop, and pause gates still apply.

**Steps to reproduce**

1. Hand a task from a chat to a worker and make the chat wait on that
task.
2. Finish a workspace finalize that starts before its nested snapshot
and ends after the successful snapshot.
3. Mark the worker Done and deliver its completion outbox entry.
4. On the parent revision, the dependency stays blocked and the
completion receipt is absent.

**Paperclip version or commit**

Reproduced against `53f480d1b3` with real disposable Postgres rows and
the normal queue/outbox services.

## What Changed

- Honor `allowRunCoalescing: false` when recording execution waits.
- Accept an enclosed successful operation only when the successful
finalize has the same company, workspace, issue, and run and covers its
whole recorded interval.
- Preserve the existing rule that a strictly later successful workspace
finalize clears earlier work.
- Add failure controls for foreign runs, unfinished snapshots, failed
saves, snapshots that finish too late, and later operations.
- Exercise the real outbox and queue together. Hold provider dispatch at
the existing drain boundary and verify server-recorded Done facts reach
the admitted turn.
- Document receipt identity and workspace-save coverage.

## Verification

- Before repair: the two causal regressions fail and five safety
controls pass. The missing exact receipt and empty wakeable-dependent
list match the observed failure.
- After repair: those seven cases pass without assertion changes.
- The full affected set passed 288 tests and failed one existing
scheduling test. Its unchanged Node24 baseline also failed. A
closed-phase probe showed the fake adapter finished successfully at
3.453 seconds, after the incidental 3-second poll. The test now joins
the existing execution promise and retains its status and dependency
assertions under the unchanged Vitest timeout. The synchronized full
dependency suite passes all 13 cases.
- `pnpm -r typecheck` and `pnpm build` pass on pinned Node24/pnpm9.
`pnpm test:run` is running. The combined real outbox/queue case passes.
Fresh Greptile is 5/5 on `d7cee24b7032c7fdf171bfd1246cd90d41db1cba`.
Exact-head normal CI and required `ci / verify` and `ci / e2e` pass.
- The original scheduling failures on Node26 and Node24, the
unchanged-source baseline failure, and the closed-phase probe are
retained in the validation record. No model, deadline, production
assertion, or paid attempt was retried to change the failure grade.
- Current-head CI attempt1 passed all product and workspace coverage but
failed the unchanged serialized retry-worker case at
`issue-scheduled-retry-routes.test.ts:606` (first batch not observed
before the poll deadline;410 other shard tests passed). The exact
unchanged case passes locally on Node24 with real Postgres. The one
failed-jobs-only retry passed on the same head; the original grade is
retained.
- The full local command completed all1828 chat integration tests. Its
general stage remains running and has retained failures in unchanged
`workspace-runtime.test.ts` (30-second local port-conflict fixture) and
`muse-control.test.ts` (current binding authentication fixture). These
are not counted as passing local full-suite evidence. Their current-head
hosted coverage passed.
- The separate advisory Paperclip Review app is paused and has no code
finding. Its in-progress state is preserved and is not counted as a
pass; it is not a required repository status check.
- The live Cloud completion journey remains failed and unqualified. It
must pass at the deployed fixed revision before daily-plan admission. No
QA oracle, model, budget, or run limit changes are included.

## Risks

- The workspace coverage query must not clear a save from another owner
or new work after finalization. The guard checks the full interval and
exact owner identity, with negative controls.
- Refused noncoalescible automatic wakes retain separate receipts.
Replaceable automatic signals still merge. No new polling or provider
retry path is added.
- No migration or API change. Deployment and live acceptance are
separate remaining gates.

## Model Used

- OpenAI Codex, GPT-6, with reasoning, tool use, and code execution. The
exact deployment variant and context-window size are not exposed in this
session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-02 15:06:26 -06:00
DottaandPaperclip 0710c56842 fix: retry saved chat input after a successful run (#18621)
## Thinking Path

> - Paperclip manages AI agents and the work they receive.
> - Connected conversations save incoming requests before they can run.
> - A request can remain queued when the previous turn finishes
successfully.
> - Task Retry sent that case through the failed-run retry guard, which
rejected the successful run.
> - This change resumes the saved request through its existing admission
owner.
> - The operator can continue saved work while preserving the prior
result and current permissions.

## Linked Issues or Issue Description

**What happened?**

Task Retry returned a conflict for a restricted connected conversation
when its latest run succeeded and newer input remained saved. A GitHub
review can reach this state when a new PR head arrives during the
previous review. The prior review cannot publish against the new head,
but its completed turn is not a failed run that can be replayed.

**Expected behavior**

Retry should resume the saved request with its original source identity
and current authorization. It must preserve the previous successful
result and must not replay that turn.

**Steps to reproduce**

1. Start a review through a restricted GitHub endpoint.
2. Send a PR synchronize event while that review runs and retain its
deferred input receipt.
3. Let the original run finish successfully with the task still open.
4. Click Retry. Before this change, the failed-run guard rejects the
request. With this change, the saved input creates one successor through
normal admission.

Related work: #17725, #16965, #15033.

## What Changed

- Select the newest saved input by its canonical chat action and wake
receipt.
- Store its receipt ID in the task retry intent and resume it through
the existing chat owner.
- Preserve caller permissions, source authorization, task state, agent
state, cleanup waits, and duplicate-click handling.
- Exclude saved-input intents from generic board-message replay. Keep
board messages in separate queued receipts and allow independently saved
input after successful board turns.
- Add signed webhook, HTTP endpoint, accepted-result preservation, and
refusal tests. Update execution semantics and capability maps. Stabilize
the existing Teams lifecycle test with explicit database result
ordering.

## Verification

- Current-head [CI
passes](https://github.com/paperclipai/paperclip/actions/runs/41482727909):
54 successful checks, one neutral review, three expected skips, and a
successful Snyk status. Greptile gives commit `53f02e9105` 5/5 with no
unresolved review threads.
- Reproduced the original HTTP 409 before the fix. Reproduced both
review findings with three failing cases before fixing them.
- Passed 25 focused and related GitHub retry cases, 52 ordinary queue
tests, and three native startup cases against disposable PostgreSQL.
Earlier related verification also passed 83 GitHub retry cases and 109
recovery/receipt cases.
- Passed `pnpm -r typecheck`, `pnpm build`, `node
scripts/check-maps.mjs`, and the module boundary check. The final server
typecheck passed after the review fixes.
- The full local `pnpm test:run` attempt stopped on an existing Slack
queue deadline assertion with a 1 ms database/host clock difference.
That case passed in isolation. A second attempt was stopped when review
changes superseded its source. Full local completion is not claimed; all
chat, server, browser, build, and runner CI jobs passed on the final
commit.
- The runner CI job needed one rerun after a two-second startup timing
assertion failed. That case and its two related cases passed locally;
the rerun passed without code changes.
- Live GitHub review publication with this patch is not verified. The
signed provider fixture uses mocked GitHub responses. This branch is not
deployed.

## Risks

- This changes how Retry dispatches deferred external input after a
successful run. It relies on the existing inbound owner to recheck
source authority before execution.
- Tests cover paused connections and agents, changed source bindings,
completed tasks, pending cleanup, duplicate clicks, and preservation of
the accepted result.
- No schema migration or public API shape change is required.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, code execution, and browser
tools. The exact deployed model ID and context-window size are not
exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-02 11:46:46 -06:00
DottaandPaperclip 9ca9af544a Drive remaining live run and resource recovery from durable work (#18419)
Reviewed and verified at 6a4c193906.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-31 16:00:35 -05:00
DottaandPaperclip eb12cfc96b perf(github): activate connection work from events and deadlines (#18395)
Reviewed and verified at f77620b9a4.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-31 15:38:43 -05:00
DottaandPaperclip 9a3f395737 fix(server): settle routine history without idle scans (#18399)
Reviewed and verified at 0b65f490d9.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-31 13:19:31 -05:00
DottaandPaperclip b6b57079b9 fix: evaluate status cards on committed changes and deadlines (#18401)
Reviewed and verified at 21795e222a.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-31 11:41:59 -05:00
DottaandPaperclip 3ee4c5b613 Make saved execution receipt recovery react to durable work (#18409)
Reviewed and verified at 8f306e0a6e.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-31 10:03:59 -05:00
DottaandPaperclip baf651c8d0 perf(heartbeat): drive retry promotion from durable deadlines (#18387)
Reviewed and verified at f1c48c924d.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-31 09:07:52 -05:00
DottaandPaperclip 61bd4ac691 feat(agents): set up Antigravity with saved Google subscriptions (#18189)
## Thinking Path

> - Paperclip manages agents and their work.
> - Users choose providers and managed accounts while adding agents.
> - Antigravity was missing from the ordinary additional-agent picker
and its saved Google path did not complete native readiness.
> - A user needs a successful Test, an enabled task action, and a stable
account binding.
> - This pull request connects the ordinary setup flow to the native
candidate.
> - It also preserves retired credential refreshes across database
failures and server restarts.

## Linked Issues or Issue Description

Built on merged #18188 and #18187. Refs: #12503, #14938 for related
legacy CLI proposals.

**Agent or provider**

Google Antigravity ACP 1.4.3.

**Why this adapter is useful**

Users need to set up an Antigravity agent and run real work through
their managed Google subscription.

**How the agent is invoked**

Native Paperclip Runner uses the pinned Antigravity ACP runtime. Exact
operator admission remains required; the local candidate result does not
enable general release.

## What Changed

- Show Google Antigravity in the ordinary adapter grid and preserve the
draft choice when setup resumes.
- Reuse the same user’s saved personal default Google subscription and
discover the exact low model through the native account.
- Run a prompt-free native Test and wait for authoritative readiness
before enabling task assignment.
- Carry the managed account through native runs and recover retired
refreshes through the existing encrypted, fsynced journal with exact
generation checks.
- Retain the latest rotated credential through verification, storage,
and partial home-removal failures. Retry the exact account’s retained
cleanup before another provider use.
- Reconcile cleanup before taking the credential mutation lock, fence
owners arriving during lock acquisition, and support nested lock holders
without a join cycle.
- Bound sign-in retirement outside database transactions and preserve
claims for the existing cleanup owner; one pending sign-in does not
block unrelated accounts.
- Cover Gemini and Pi API-key recovery, keep API-key bulk manual-model
editing usable, and keep adapter discovery available after candidate
expiry.
- Skip taskless native timer work before run or credential admission.
Preserve current master monitor and deadline scheduling.

## Verification

- The registered local saved-Google-subscription journey passed all 16
matchers in 196,520 ms using eval source `12aba` against actual serving
source `4a37ee7c`. Both turns stayed in one conversation, produced exact
downloaded files of 61 and 119 bytes after reload, and used distinct
native primary processes. All observed owners retired, leases released,
and credential fences settled. Independent readback confirmed Done work,
no active owned runs, a connected saved account, and the retained agent
paused for inspection.
- The measured runtime is production-equivalent to pre-restack
`65ef31dc` except its test-only transport fixture correction.
Current-master head `ff7c9249` preserves all 99 product paths: 98 exact
blobs and only eight inherited plugin-panel lines in `agents.ts`. Its
native binary was rebuilt for inherited Codex-only diagnostic changes;
the changed Rust behavior is outside Antigravity's ACPX execution path.
Shared native/UI changes have focused regression coverage. The recorded
live result is not represented as a measured replay of `ff7c9249`.
- Full workspace build and typecheck passed on `ff7c9249`. All 376
focused tests in 14 files passed, covering Google credential/retirement
controls and the inherited native-tool, redaction, route, and UI
recovery changes. Token gates, maps, and diff checks passed. The
required-close fixture was separately demonstrated red, then passed all
317 selected provider-wiring cases.
- [Current-head
CI](https://github.com/paperclipai/paperclip/actions/runs/40959387972)
is green: 55 successful checks, two skipped workflow checks, and an
optional neutral review check. Required `ci / verify` and `ci / e2e`
passed. Greptile and Paperclip Review both report 5/5 on exact
`ff7c9249`, with zero unresolved review threads.
- This qualifies the selected operator-authorized local
saved-subscription candidate. The original exploratory journey remains
historical evidence; the repeatable fixed-driver eval is in the next PR.

## Risks

- Google refresh recovery must preserve the exact grant, account, and
credential generation. An uncertain native owner or failed encrypted
handoff retains the private home and blocks cleanup.
- A successful local saved-subscription candidate does not qualify fresh
OAuth, API keys, Cloud, Linux, other models, or general release.
- Timer filtering changes only taskless native Runner admissions.
Existing task-bound monitors and legacy adapters retain their owners.

## Model Used

OpenAI Codex (GPT-6). The host did not expose the exact model revision
or context limit. The model used tools for code edits, tests, and
review.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 16:51:50 -05:00
ba07f85cad perf: schedule agent timers from durable deadlines (#17876)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/58/changes/paperclip/58
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Agent timers must start due work and preserve queue admission rules.
> - The server woke their scan on every heartbeat interval, even with no
eligible timer.
> - Idle scans keep the database and instance active.
> - This pull request derives the next deadline from saved policy and
work records.
> - Supported producer transactions notify the shared coordinator when
eligibility changes.
> - An idle timer worker stops scanning and resumes when real work or a
deadline requires it.

## Linked Issues or Issue Description

Refs #17863. This is slice 63 of the recurring-work migration and
follows the merged issue-monitor deadline PR.

Related: #16632 changes timer issue scope; #16881 changes live-run
eligibility. This PR preserves the current admission policy. Those
policy changes are separate work. A future time-sensitive predicate must
expose its next transition deadline.

**What existing behavior does this improve?**

Agent timer heartbeat scheduling in the server.

**Current behavior**

A recurring heartbeat wakes the timer scan even when companies are
paused, timers are disabled, or no actionable task exists.

**Proposed behavior**

Register the earliest eligible interval or positive daily-cap reset
deadline. Re-read on supported producer commits and startup. Leave no
recurring database scan when no timer obligation remains.

## What Changed

- Keep policy and deadline calculation in the heartbeat queue.
Scheduling retains company, reporting-chain, worktree, and CAS gates.
- Use the existing deadline coordinator. Remove only the timer wake from
the server heartbeat loop.
- Notify before existing transaction writes that change eligibility or
deadlines. Cover configuration, lifecycle, company budgets, task
ownership, recovery, conversations, accounting corrections, and
completion.
- Use the lifecycle status-change hook for saved hire rejection. Cover
checkout's second adoption transaction after an initial failed CAS.
- Preserve pending work through idle and maintenance drains. Check
cancellation between due agents. Reconstruct on restart.
- Document the supported writer model and producer inventory. Add no
schema, table, or provider branch.

## Verification

- **1,710 passing cases across 49 complete files**, no skips, on
accepted source `32db86c1974dcbf794f01a8c5e42024e2ad071fc`. Coverage
includes real timer policy/CAS/producers, monitor and shared deadline
consumers, native reconstruction, Slack lifecycle,
skills/settings/configuration, queue isolation and agent lifecycle.
- Database build, production server typechecking/build, module
boundaries, target migration order and Runner profile identity pass.
Twenty-nine fresh PostgreSQL 17 schemas plus per-file fixtures applied
all 412 journal entries through index 413; all selected source hashes
and temporary fixture imports were restored exactly.
- Four new deadline composition cases verify future/overdue timing,
minimum scan spacing and disarming. A controlled mutation dropping only
the inherited continuation option fails; the composed source passes with
identical assertions and timers.
- Normal parent reconciliation preserves task-drain expiry and both
deadline contracts. The final monitor-parent publication changes only
its audit, preserving every qualified runtime and selected test source.
- Historical failures and review corrections remain in [the timer
audit](doc/idle-agent-timers.md). No full local repository-suite, live
provider, measured suspend/wake, external-alarm or fleet-savings claim.
Final-head CI/security, exact-head Greptile 5/5 and actionable Ponytail
findings remain separate merge gates.

## Risks

- Process-local notifications cover supported service/API writers in one
server process. Direct SQL and independent replicas need an explicit
ingress contract. Startup reconstruction is not live cross-process
notification.
- Notifications can batch for up to the configured heartbeat interval.
Known deadlines retain their scheduler path; failed reconciliation
retains bounded retry.
- Enabled timers without an actionable-work requirement remain real
recurring obligations. Zero caps require policy changes; positive
reached caps use UTC midnight.
- The timer fixture substitutes adapter enqueue. Existing admission
tests also pass, but this is not deployed provider or sleep
qualification.
- Cloud does not gain legacy agent timer alarms in this PR. Existing
sleep-safety blockers remain. No database/host suspension or fleet
savings claim is made.
- Parent-stack CI and review must pass before merge. This PR does not
authorize merging its dependencies.

## Model Used

OpenAI Codex (GPT-6-based coding agent), using repository inspection,
normal Git merges, composition proofs, a controlled red/green regression
and complete PostgreSQL integration suites. No subagents were used in
this reconciliation.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Codex <noreply@openai.com>
2026-10-29 08:58:27 -05:00
0f6f0a3fee fix(server): schedule issue monitors without heartbeat polling (#17863)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/56/changes/paperclip/56
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Issue monitors save a future check on an existing issue.
> - The heartbeat timer still scans monitors on every tick, even when
none are due.
> - The saved deadline and claim already provide durable scheduling
state.
> - This pull request gives monitors their own deadline worker and
connects state changes to it.
> - Idle monitor work stops querying. Existing admission and recovery
rules remain in force.

## Linked Issues or Issue Description

Refs #17840, #16325. Related: #17171 addresses rearming a monitor after
its admitted run fails. This PR changes when monitor inspection runs and
follows the merged routine prerequisite.

**What existing behavior does this improve?**

Issue-monitor scheduling and idle database use.

**Current behavior**

Heartbeat ticks call the combined agent and monitor sweep. The existing
next-deadline query only retains future monitors. Polling covers overdue
leftovers, stale claims, and changes that make a saved monitor eligible.

**Proposed behavior**

Use the shared deadline worker. Retain overdue work with bounded
retries. Wake after committed changes to monitor state, issue
eligibility, company state, or native ownership. Keep legacy agent ticks
separate for the next slice.

## What Changed

- Add monitor-specific sweep and deadline methods to the existing
scheduling owner. Keep the manual combined method.
- Include overdue work and the strict five-minute claim fence. Exclude
active native owners until their state changes.
- Register monitors with the shared deadline worker. Heartbeat ticks
wake only the legacy agent timer worker.
- Connect direct issue-state writers and existing execution-control
notifications to monitor work. Checkout uses a short transaction around
its existing CAS. Provider work stays outside it.
- Add real database lifecycle tests and retain routine, startup,
admission, execution-control, and native-projection coverage.
- Record the obligation, producer inventory, recovery behavior, and
limits in `doc/plans/2026-10-27-issue-monitor-sleep-audit.md`.

## Verification

- **1,233 passing cases in 35 complete files**, no skips, on accepted
source `c24aadfc91e9394d73c799f9e05fc67202160557`. Coverage includes
real monitor scheduling/admission, native settlement, committed
producers, retained routines and all shared deadline consumer
integration suites.
- Database build, production server typechecking/build, module
boundaries, target migration order and Runner profile identity pass.
Twenty-four fresh PostgreSQL 17 schemas plus per-file fixtures applied
all 412 journal entries through index 413; every selected source hash
and temporary fixture import was restored exactly.
- Normal parent reconciliation preserves master's admitted-wake result
and scoped issue deletion while keeping committed monitor notifications.
All other paths match the automatic merge; packages remain byte-exact to
the qualified parent. The final routine-parent publication changes only
its audit.
- Historical failures and corrections remain in [the monitor
audit](doc/plans/2026-10-27-issue-monitor-sleep-audit.md). Old
delegated-Slack rate and Runner drain CI failures are retained; the
current inherited clock fixture and package source are byte-identical to
merged #17835. Fresh final-head CI remains required.
- No full local repository-suite, live provider, deployed suspend/wake,
external-alarm, production-load or fleet-savings claim. Final-head
CI/security, exact-head Greptile 5/5 and actionable Ponytail findings
remain separate merge gates.

## Risks

- A missing producer notification can strand a monitor after polling is
removed. The audit covers ordinary writes, direct status/assignment
writers, recovery, and native ownership changes.
- The writer model is process-local. Independent SQL writers and other
replicas need a supported notification or reconciliation contract.
- Overdue work uses the configured heartbeat interval as a retry floor
for the monitor worker. New notifications during that backoff wait for
its next pass. Normal state-change bursts coalesce for one second.
- Notification fanout can inspect monitors during other active work. An
unchanged idle subsystem has no recurring monitor scan.
- The legacy agent timer still polls. Cloud sleep proofs and external
alarm coverage are unchanged.

## Model Used

OpenAI Codex (GPT-6-based coding agent), using repository inspection,
ordinary Git merges, composition proofs, PostgreSQL fixtures and
complete local integration suites. No subagents were used in this
reconciliation.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Codex <noreply@openai.com>
2026-10-29 08:40:56 -05:00
829f9e7eaf fix(server): settle Muse terminal assignments from committed changes (#17793)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/12/changes/paperclip/12
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Its external-agent module owns Muse assignments, operation receipts,
and worker holds.
> - Running assignments and retained terminal history must not cause an
empty maintenance scan every five seconds.
> - Terminal run changes and operation results already have durable
database transactions.
> - This pull request wakes the existing maintenance worker from those
commits and reconstructs work at startup.
> - The worker retries only concrete settlement debt. It retains
qualification deadlines and authority checks.

## Linked Issues or Issue Description

Refs: #17772. This is slice 57. Parent #17772 has merged.
Related: #17000, #17525, #17752, #17758. The publication targets master
and preserves the merged parent.

**What existing behavior does this improve?**

Muse terminal assignment settlement and the existing Muse maintenance
worker.

**Current behavior**

A running assignment can keep maintenance scanning every five seconds.
Terminal reconciliation rewrites unchanged history. Native finalization
also calls that reconciliation during periodic replay. Discovery
excludes a revoked original binding even when its assignment still needs
settlement.

**Proposed behavior**

Committed run changes and operation receipts wake the existing worker
with the original company, run or binding identity. Startup reconstructs
actionable work from existing rows. Maintenance processes bounded
batches and disarms after settlement. Default live and manual callbacks
remain. The periodic callback delegates this one duty.

**Reason and benefit**

Configured but idle instances stop querying for this obligation. Late
receipts, restarts, drain and historical bindings still have recovery
paths. No table or independent timer is added.

**Breaking changes**

No schema, endpoint or provider protocol changes. Explicit manual
reconciliation retains its unbounded default. This does not alter Cloud
sleep admission or claim that all instance work can sleep.

## What Changed

- Add an owner predicate shared by discovery and locked settlement.
Fenced private-worker uncertainty remains held without an automatic
retry loop.
- Preserve original binding generation and company/agent/run identity,
including revoked bindings. Fence only the terminal assignment during
reconciliation.
- Extend existing maintenance with scoped hints, bounded batches,
concrete-debt retry, startup reconstruction and quiet drain behavior.
- Register notifications inside existing terminal, projection,
cancellation, operation-result and send-failure transactions. Keep
qualification and OAuth signals explicitly global when coalesced with
scoped changes.
- Serialize only four domain IDs. Real native-finalizer tests caught and
prevent a circular-object serialization failure at this boundary.
- Use existing restore/worktree suppression and settings reactivation.
Delegate both periodic finalizer branches while retaining resource
callbacks and default live/manual settlement.
- Add the producer audit and regression evidence in
`doc/plans/2026-10-26-muse-terminal-settlement-sleep.md`.

## Verification

Accepted production source: `584015018ed4a9d57d2b0f192b75847503b54e53`.
Publication head: `305014b030d6c5eb891c70bc57036f4192d4fdad`. Normal
adoption of the actual parent squash preserves the complete accepted
child tree. Only audit text, a migration-count clarification, and the
proved Photon test extension follow.

- **3,715 distinct cases in 52 complete server files pass**, plus **20
selected chat cases** (3,735 selected total). The main 49-file batch
passes 3,008; process recovery passes 410; review response passes 273;
the full Photon file passes 24. The other 1,794 chat cases were not run
locally.
- **Quiet producer proof:** moving only the Muse fanout outside its
parent guard produces six candidate SELECTs and fails the regression.
Keeping the guard yields zero and still settles a real terminal run. The
same test hash spans the controlled red/green pair.
- **Photon review evidence:** repeated active callbacks produce zero
settlement hints/candidate SQL. Three concurrent attention recoveries
produce exactly one of each. The existing locked attention guard was
correct; production needed no fix. The parent security check accepted
the resolved finding before merge. This PR keeps the additional
settlement queue in the existing regression.
- **Static checks pass:** database build; server typecheck/build; module
boundaries; migration order; current Copilot identity. Packages equal
the accepted parent byte for byte. No new live provider qualification is
claimed.
- **Fixtures and failures:** 34 fresh PostgreSQL 17 fixtures have 412
applied migration receipts through tag 0413_tired_kronos, plus fresh
per-call helper fixtures. All 52 original test hashes restore exactly.
The additional Photon test hash matches its passing proof. Earlier
remote chat passive-idle failure remains recorded; both passive/missing
cases pass in the new selection. Parent handoff timeout/fresh-file-pass
accounting remains in its audit. No assertion or timeout was weakened.
- [Integration and quiet producer
audit](https://github.com/paperclipai/paperclip/blob/305014b030d6c5eb891c70bc57036f4192d4fdad/doc/plans/2026-10-26-muse-terminal-settlement-sleep.md#current-master-integration-and-quiet-producers-2026-10-29).
Fresh CI, security, and exact-head Greptile 5/5 must pass before merge.

<details><summary>Earlier revision verification and failure
history</summary>

Receiver failure fairness: a controlled 1,100 ms batch reproduced a
30-second delay for healthy due receivers. The worker now supplies its
existing per-item deadline through `nextRunAtOnError`. All 20 receiver
lifecycle tests pass on the owner and combined tip
`31c12f1d68ff4a51e06fc2be2abf2c2aee9f9d3a`; server production
typechecking passes on the owner. The failed receiver retains its own
backoff, and settled receivers return to zero recurring SQL. The
five-second assertion budget is unchanged. See [the owning
audit](https://github.com/paperclipai/paperclip/blob/f7477933469fdc960f555425dce66eff25a94e54/doc/plans/2026-10-25-chat-receiver-discovery-sleep-audit.md#healthy-receiver-progress-after-a-slow-failed-batch).
Current-head CI and review remain required.

Approved delegated Test-tab calls now evaluate caller and target
policies in the existing claim transaction. Real HTTP regressions first
showed a missing caller charge and shared-limit self-rejection. All 78
connection-management cases and 92 gateway cases now pass on the owning
branch, along with server production typechecking. All 78
connection-management cases also pass at combined tip
`d25f830db89c1623bff3547bfc68015c1c66e0cf`. The three new cases cover
shared charges, separate charges, rollback on denial, duplicate
approval, and rejection of a later authorized call. Intermediate
counter/identity fixture failures and a reused-database Slack collision
are recorded in [the owning
audit](https://github.com/paperclipai/paperclip/blob/bbd31dea5ef3a4875950a87b4636af8b6bde858e/doc/idle-approved-tool-recovery.md#delegated-test-tab-admission-after-policy-changes).
The earlier combined checks below remain evidence for their stated
revisions. Current-head CI and review remain required.

Inherited voice-cleanup verification: the controlled slow-provider
regression and all 13 lifecycle tests passed on its owner and combined
tip `ab22d8ed0c09028315607414b83b375e5cc0a60a`. That repair changed only
the fixture clock advancement and its audit note.

Current head: `f7477933469fdc960f555425dce66eff25a94e54`. This remains a
single-duty PR stacked on #17772.

- Integrated pinned master `8548173fc9efdc0fa07644fb92dcc0b6851a95e5`
with normal merges. Every branch passed generated-schema checks and its
target-branch migration-order gate. Existing SQL is unchanged; the 25
stack migrations follow master’s new migration.
- Duty-specific producer coverage, lifecycle tests, and earlier failure
records:
[2026-10-24-recurring-server-sleep-stack.md](https://github.com/paperclipai/paperclip/blob/ff196791db6dada2dc04ea9db0d58c5c3beb4a41/doc/plans/2026-10-24-recurring-server-sleep-stack.md),
[2026-10-26-muse-terminal-settlement-sleep.md](https://github.com/paperclipai/paperclip/blob/ff196791db6dada2dc04ea9db0d58c5c3beb4a41/doc/plans/2026-10-26-muse-terminal-settlement-sleep.md).
- Combined tip `51e6cbe67979b55b340ea9f0f434c5b5c682ccd6`: **355
startup/cancellation/recovery/dispatch/preservation tests**, **75
connection-management tests**, and production server typechecking pass.
These combined checks do not mean every intermediate PR independently
ran the full repository suite.
- Real master-to-stack database upgrade passes: **379 unchanged prior
migration receipts plus 25 new migrations**, with the gateway
responsibility fixture preserved.
- Owning-branch checks: 84 runner installation/settlement cases plus
runner typechecking and generated TypeScript/Rust profile agreement; 253
GitHub review workflow cases. Stop-attribution and held-worker readiness
regressions failed before their fixes.
- Failure accounting: the initial combined run passed 349 cases and
failed six idle assertions in a reused preservation database containing
old cancelled runs. Repeating the combined command with a fresh
preservation database passed. Earlier invalid project selection, merge
import/type errors, and the interrupted full local suite are not counted
as passing checks.
- **Latest-head CI and review remain required.** Prior CI findings
include GitHub idle observation, route teardown, attention cleanup,
touch-picker E2E, workspace health, and voice-cleanup timing; local
passes do not erase those failures. No full local repository-suite,
deployed sleep, fleet cost, or live Copilot qualification claim is made.


</details>

## Risks

- In-process signals do not capture independent SQL or other replicas.
Supported external events still need ingress.
- Pending assignments and operation receipts retain their original
binding identity. A new agent configuration cannot take their ownership.
- Genuine qualification, OAuth, and recovery deadlines remain
obligations. They must not be discarded merely to make the worker quiet.
- The parent coarse-hint guard prevents recurring Muse discovery; real
company/binding authority changes retain their signals.
- No full local repository suite, full chat suite, live Muse or Copilot
qualification, deployed sleep, database suspension, external alarm
coverage, or cost savings is claimed. Existing Cloud blockers remain.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, code execution, real
PostgreSQL tests, and GitHub tools. The exact runtime model identifier
and context-window size are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Codex <noreply@openai.com>
2026-10-29 06:18:40 -05:00
4d0847c4ca fix(server): settle external conversations from committed work (#17772)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/6/changes/paperclip/6
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip manages AI agents and the tasks that they execute.
> - External conversations must become idle after an authorized response
is published and all related work is complete.
> - Native replay and stranded-task recovery still discover this
settlement work through recurring scans.
> - A new deadline worker must preserve response ordering, monitor
handoffs, and unfinished work.
> - This pull request gives settlement one shared readiness predicate
and activates its worker from committed changes.
> - Existing rows provide recovery truth. No new table or per-feature
timer is added.
> - The benefit is a settlement worker that becomes quiet and resumes
when relevant work changes.

## Linked Issues or Issue Description

Refs #17758. This is slice 56. Slice 55 has merged. Related: #17606
(chat milestones), #17663 (bounded run reads), #17665 (monitor proof),
and #13809 (answered Slack conversation lifecycle). The provider
applicability remains Slack and Speko-owned conversations. This does not
extend Telegram settlement from #16559.

**What happened?**

Conversation settlement depended on periodic native replay and generic
task recovery. An exhausted monitor also cleared its schedule before
recovery admission. During that gap, an answered conversation could look
finished. Failed or deferred admission lost the monitor schedule.

**Expected behavior**

Relevant committed changes activate settlement. The worker uses the
owning service's evidence and becomes quiet when no settlement is owed.
Monitor recovery stays pending until admission, and restart does not
admit an already accepted recovery twice.

**Steps to reproduce**

1. Create an active external conversation with a successful run and an
authorized published response.
2. Keep execution, approval, a goal, or a monitor pending. Let the
settlement worker become quiet.
3. Resolve that prerequisite through its owning service. Verify that the
conversation settles without another periodic sweep.
4. Delay or fail exhausted-monitor recovery admission. Verify that the
monitor remains pending and the conversation cannot settle during the
handoff.

**Paperclip version or commit**

Accepted production source: `50f4432ed88537b8d522cf1dce24c33588db0bac`.
Parent #17758 merged as `8ac5a128e66fb672e88106412f76cf278599bfc4`. The
publication adopts that actual squash through a normal merge with an
unchanged complete child tree.

## What Changed

- Preserve quiet after coarse company-only maintenance hints. The shared
inbound-notice and response-availability helpers keep settlement enabled
by default. Only the milestone dispatcher suppresses their duplicate
settlement fanout. Its scoped issue-review signal and the explicit
company-authority signal still wake real work. Four database cases prove
both quiet and real company-wide producer delivery.
- Preserve source-generation checks for chat handoff,
task-before-comment locking, issue-scoped decision invalidation, and
current conversation event columns from master.
- Track initial external conversation settlement through shutdown
without blocking HTTP readiness on endpoint or task locks.

- Reuse the real queue's coalesced recovery receipt after restart,
without admitting the same monitor recovery again.

- Share the existing conversation readiness predicate between bounded
discovery and locked settlement. Preserve current provider policy,
run/publication proof, company boundaries, and endpoint-to-issue lock
order.
- Register a scoped deadline worker through the delivery coordinator.
Preserve startup, restore/worktree suppression, drain/resume, failure
recovery, and joined shutdown.
- Extend existing review, milestone, wake-notice, and finalization
signals. Add notifications at independent issue, comment, goal, session,
and wake-receipt unblocks.
- Keep monitor owner recovery pending until guarded admission. Reuse an
accepted receipt for the same monitor schedule after restart, even when
its limit reason changes; retain compatibility with legacy receipt keys.
Commit board escalation and its monitor clear together.
- Delegate periodic native settlement while preserving resource
callbacks. Keep direct/manual defaults and preserve generic recovery
ordering with a read-only readiness guard.
- Add the producer and lifecycle audit in
`doc/plans/2026-10-26-external-conversation-settlement-sleep.md` and
update the stack ledger.

## Verification

Accepted production source: `50f4432ed88537b8d522cf1dce24c33588db0bac`.
Publication head: `b256bb52647affd9f5279ea8c40f48bbe40f031f`.
The complete accepted child tree stays unchanged when adopting merged
parent #17758. This publication adds only the audit document.

- **3,129 distinct cases in 37 complete server files pass**, plus **18
selected chat-response cases** (3,147 selected cases). The other 1,796
chat cases were not run locally. Full settlement, queue, scheduling,
run-state, goals, interactions, task Retry, decision targets, status
reassessment, workspace, process recovery, and review consumers are
covered.
- **Preserved failure:** the first 35-file command passed 2,445 cases
and timed out one restored-work handoff at its existing 15-second limit.
That aggregate command failed. The unchanged full 89-case actions file
then passed on a fresh fixture; the affected case took 22 ms. Root cause
was not established. No timeout or assertion changed. The 34 other files
passed originally. Distinct counts exclude duplicate actions passes.
Fresh CI remains a separate gate.
- **Indirect wake regression:** the original unconditional baseline
failed two quiet checks. Guards alone left the chat case failing with
three candidate queries. The final controlled indirect baseline fails
one of four cases; the repair passes all four with the same test hash.
Positive controls preserve real company-only producers.
- **Source and fixture controls:** all 38 selected test files restore to
their exact committed hashes after fixture imports. Fresh PostgreSQL 17
fixtures use 413 migrations. All five manual merge resolutions preserve
current authority, locking, and event-column contracts.
- **Static checks pass:** database build; server typecheck and build;
module boundaries; migration order; Copilot profile identity. Runner
packages equal the accepted parent byte for byte. No new Runner/package
qualification is claimed.
- [Current integration and wake
audit](https://github.com/paperclipai/paperclip/blob/b256bb52647affd9f5279ea8c40f48bbe40f031f/doc/plans/2026-10-26-external-conversation-settlement-sleep.md#current-master-integration-and-indirect-wake-audit-2026-10-29).
Latest-head CI and exact-head Greptile 5/5 must pass before merge.

<details><summary>Earlier revision verification and preserved failure
history</summary>

Receiver failure fairness: a controlled 1,100 ms batch reproduced a
30-second delay for healthy due receivers. The worker now supplies its
existing per-item deadline through `nextRunAtOnError`. All 20 receiver
lifecycle tests pass on the owner and combined tip
`31c12f1d68ff4a51e06fc2be2abf2c2aee9f9d3a`; server production
typechecking passes on the owner. The failed receiver retains its own
backoff, and settled receivers return to zero recurring SQL. The
five-second assertion budget is unchanged. See [the owning
audit](https://github.com/paperclipai/paperclip/blob/83204a67880d980cfbea3771cee19a3cda0022b7/doc/plans/2026-10-25-chat-receiver-discovery-sleep-audit.md#healthy-receiver-progress-after-a-slow-failed-batch).
Current-head CI and review remain required.

Approved delegated Test-tab calls now evaluate caller and target
policies in the existing claim transaction. Real HTTP regressions first
showed a missing caller charge and shared-limit self-rejection. All 78
connection-management cases and 92 gateway cases now pass on the owning
branch, along with server production typechecking. All 78
connection-management cases also pass at combined tip
`d25f830db89c1623bff3547bfc68015c1c66e0cf`. The three new cases cover
shared charges, separate charges, rollback on denial, duplicate
approval, and rejection of a later authorized call. Intermediate
counter/identity fixture failures and a reused-database Slack collision
are recorded in [the owning
audit](https://github.com/paperclipai/paperclip/blob/ef9ae5767430d0093efc736ae0b303ba5afaae65/doc/idle-approved-tool-recovery.md#delegated-test-tab-admission-after-policy-changes).
The earlier combined checks below remain evidence for their stated
revisions. Current-head CI and review remain required.

Inherited voice-cleanup verification: the controlled slow-provider
regression and all 13 lifecycle tests passed on its owner and combined
tip `ab22d8ed0c09028315607414b83b375e5cc0a60a`. That repair changed only
the fixture clock advancement and its audit note.

Current head: `83204a67880d980cfbea3771cee19a3cda0022b7`. This remains a
single-duty PR stacked on #17758.

- Integrated pinned master `8548173fc9efdc0fa07644fb92dcc0b6851a95e5`
with normal merges. Every branch passed generated-schema checks and its
target-branch migration-order gate. Existing SQL is unchanged; the 25
stack migrations follow master’s new migration.
- Duty-specific producer coverage, lifecycle tests, and earlier failure
records:
[2026-10-24-recurring-server-sleep-stack.md](https://github.com/paperclipai/paperclip/blob/d6d8e4ffa6b330ebf4647aec997ee2dde6abc321/doc/plans/2026-10-24-recurring-server-sleep-stack.md),
[2026-10-26-external-conversation-settlement-sleep.md](https://github.com/paperclipai/paperclip/blob/d6d8e4ffa6b330ebf4647aec997ee2dde6abc321/doc/plans/2026-10-26-external-conversation-settlement-sleep.md).
- Combined tip `51e6cbe67979b55b340ea9f0f434c5b5c682ccd6`: **355
startup/cancellation/recovery/dispatch/preservation tests**, **75
connection-management tests**, and production server typechecking pass.
These combined checks do not mean every intermediate PR independently
ran the full repository suite.
- Real master-to-stack database upgrade passes: **379 unchanged prior
migration receipts plus 25 new migrations**, with the gateway
responsibility fixture preserved.
- Owning-branch checks: 84 runner installation/settlement cases plus
runner typechecking and generated TypeScript/Rust profile agreement; 253
GitHub review workflow cases. Stop-attribution and held-worker readiness
regressions failed before their fixes.
- Failure accounting: the initial combined run passed 349 cases and
failed six idle assertions in a reused preservation database containing
old cancelled runs. Repeating the combined command with a fresh
preservation database passed. Earlier invalid project selection, merge
import/type errors, and the interrupted full local suite are not counted
as passing checks.
- **Latest-head CI and review remain required.** Prior CI findings
include GitHub idle observation, route teardown, attention cleanup,
touch-picker E2E, workspace health, and voice-cleanup timing; local
passes do not erase those failures. No full local repository-suite,
deployed sleep, fleet cost, or live Copilot qualification claim is made.


</details>

## Risks

- Signals cover supported in-process writers. They do not supply change
capture for independent SQL or other replicas.
- Real company-wide changes can inspect active candidates. Coarse
maintenance hints do not activate settlement. Configured idle and
retained history must remain quiet.
- Monitor receipt binding and admission order must preserve company,
agent, issue, and exact schedule identity. Current parent handoff locks
and source-generation checks remain intact.
- The local restored-work timeout is retained above. A fresh full-file
pass does not establish its cause; latest-head CI must also pass.
- Generic recovery and Muse/resource duties remain separate slices. This
does not make the whole server idle. Existing Cloud sleep blockers
remain. No deployed sleep, database suspension, external alarm coverage,
fleet cost, or live provider qualification claim is made.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, code execution, PostgreSQL
tests, and GitHub tools. The exact runtime model identifier and
context-window size are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Codex <noreply@openai.com>
2026-10-29 06:02:43 -05:00
df6156c2e3 fix(server): wake native status reassessment from committed changes (#17709)
## Thinking Path

> - Paperclip manages agents, tasks and their durable native results.
> - Changed evidence, task authority or review retirement can require a
new status assessment.
> - Periodic orphan recovery repeatedly reads history to find these
changes.
> - This change gives reassessment an owner driven by committed changes
and saved deadlines.
> - Existing result, assessment, decision and task rows remain durable
truth.
> - The status committer still verifies current sources and authority
before writing.
> - Settled or insufficient evidence becomes quiet until a supported
producer changes it.

## Linked Issues or Issue Description

Refs #17702 (merged), #17679 and #17680. This is slice 50, now based on
master. It owns native status reassessment; workspace settlement,
retained sessions and other orphan duties remain separate.

**What happened?**

Periodic recovery repeatedly inspects completed native results. Removing
that scan without complete writer coverage or current authority checks
could strand new evidence or commit an old result over newer work.

**Expected behavior**

Reassess from existing durable facts after relevant outer transactions
commit. Retain real retry/lease deadlines and restart/drain recovery.
Preserve current authority, quality-review and supersession checks. Make
no recurring SQL when work is settled or dormant.

**Steps to reproduce**

Complete a native result awaiting evidence or review, leave it idle,
then approve a real work product or retire the selected automatic
review. Its saved result should advance once when authorized, or record
the existing nonterminal business gate, without a periodic scan.

## What Changed

- Extract reassessment and its pure status policy from finalization
recovery into their owning modules. Add a scoped worker using the
existing delivery coordinator and scheduler; no queue table or migration
is added.
- Retain the three durable discovery triggers: changed work-product
history, authoritative task status/version, or retirement of the
selected automatic completion review. Preserve selected-source,
ownership, effects, retry and lease fences under the existing committer.
- Notify from actual task/work-product, claim release, approval,
interaction, OAuth, event evidence and workspace-settlement owners
before their transaction writes. Keep provider calls outside short
transactions and nested writes behind outer commit.
- Scope ordinary milestone/finalization/coalesced-input wakes to an
issue/run. Keep genuine company authority restoration explicit. Real
Photon and coalescer regressions cover all three response/status queues.
- Move the current parent's required quality policy into the owner and
apply it to every reassessment that could complete a task. An unmet
review records the existing in-progress decision and next action,
avoiding an operational retry loop. Preserve conversation/session reset
locks and the workspace omission-barrier signal.
- Skip reassessment in periodic recovery while preserving
explicit/startup recovery and the historical supersession guard before
independent workspace work. Document the source contract, producer
inventory, failures and qualifications in the linked audit.

## Verification

- Broad source `9fddb3f0b1157df32b64fb1f22e9d6e9624470e8` passes **2731
distinct cases in 28 complete files**, with no skips: 2458
producer/owner/authority/workspace/quality cases in 394.43 seconds and
all 273 governed-response cases in 53.74 seconds. Nineteen dedicated
fresh PostgreSQL 17 databases migrate through 0413; eighteen
embedded-only invocations preserve fresh-per-call isolation through the
existing recovery helper. All 22 temporary imports restore exactly and
all 28 hashes match.
- Final runtime source `5ea3b0fd016bf7e63ba82a7044825a46a0cd2082` passes
**1211 cases in five complete affected files** in 108.23 seconds after
the narrowly reproduced evidence-trigger fix: all 43 worker, 145 corpus,
32 finalization-recovery, 968 native-session and 23 quality-review
cases. Four fresh databases plus the quality helper's own fresh fixture
use PostgreSQL 17. Its one adapted import restores exactly; all five
hashes match. The other 27 broad-run test files are unchanged. These
qualifications are source-scoped and not cumulatively double-counted.
- Required/optional real regressions reproduce retry loops on
retired-review and evidence-approval paths before repair; both become
SQL quiet afterward with unchanged assertions/time limits. Controlled
removal of only ordinary scope guards reproduces two coarse-hint SQL
failures; exact guard restoration passes. Real producer, outer
transaction, claim, authority, 103-item backlog, retry and drain cases
pass. Photon transport is mocked; callbacks, locks and observed SQL are
real.
- Normal merges preserve 12661 parent/unrelated entries, 35 owned
entries and 21 automatic shared results, with five original conflicts
reviewed explicitly. The parent's actual squash reconciliation preserves
the entire held child tree. The final quality fix changes only its owner
and tests. Fourteen added comments are removed with identical nontrivia
tokens; no directives are removed and the final comment check is empty.
- Database build, server types/build, boundaries and exact-head
migration order pass. The database tree is identical to merged #17702:
no new SQL, queue table or snapshot is generated. Earlier benchmarks,
host limitations, failed assertions and their repairs remain in
`doc/plans/2026-10-26-native-status-reassessment-sleep-audit.md` and
`doc/idle-native-status-reassessment.md`.
- This qualifies targeted external PostgreSQL behavior, not embedded
bootstrap on the semaphore-exhausted host, a full local repository
suite, deployed sleep or measured fleet savings. Fresh exact-head CI and
review remain required.

## Risks

- Notifications retain the process-local supported-writer contract.
Independent SQL writers and uncoordinated replicas are not covered by a
new transport.
- Reassessment competes with current authority changes. Existing
row/source locks and retries remain required; arbitrary missing
identities have no row to lock, so this is not a general predicate-lock
guarantee.
- Discovery pages 100 rows but retains outstanding candidates in memory.
It remains proportional to backlog size, and cancellation occurs between
queries.
- Other orphan/workspace/session duties and Cloud sleep eligibility
remain unchanged. Missing supported producer coverage could strand
dormant work, so the producer audit and real callback/transaction tests
remain part of acceptance.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, repository tools, shell
execution and PostgreSQL tests. The runtime does not expose a more
specific serving snapshot or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass (targeted scope is stated
above)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Codex <noreply@openai.com>
2026-10-29 03:40:01 -05:00
ec3b558277 fix(server): schedule accepted native response recovery (#17696)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Native runs store accepted results and their finalization decisions.
> - A completed run can still owe its public answer after an
interruption.
> - Periodic recovery scans for that answer even when no new work
exists.
> - This pull request wakes recovery from committed changes and saved
retry deadlines.
> - The existing owner still verifies the result, source, and current
publication authority.
> - Settled or dormant response work no longer needs its own periodic
scan.

## Linked Issues or Issue Description

Refs #17690 (merged). This is slice 48 of the sleep migration stack, now
based on master. Related: #17661 handles GitHub terminal publication;
this change handles native accepted-response presentation.
Governed-review presentation remains a separate duty.

**What happened?**

Native finalization recovery repeatedly checks already accepted results
for a missing answer. Removing that check without complete notifications
would lose responses when evidence arrives late, an agent resumes, or
admission settles after execution.

**Expected behavior**

Recover the answer from its saved result when a supported change makes
it eligible. Retain real retry deadlines. Stop querying when the answer
is selected or cannot currently be published. Reconstruct work after
restart.

**Steps to reproduce**

1. Commit a native accepted result with no selected response comment.
2. Run finalization recovery while its source is unavailable or locked.
3. Restore that source or release the lock. The answer must appear once
without repeating provider execution.

## What Changed

- Honor recorded non-create decisions and skip-comment policy in both
discovery and recovery. Apply durable conversation/result/continuation
guards before recovery locks. Preserve genuine unanswered and legacy
recovery.
- Scope routine response wakes to the affected issue/run. Coalesced
input names its active run; pending-effect settlement names its issue.
Sixteen existing global authority/configuration hooks use one explicit
company invalidation boundary. No new transaction wrappers or tables are
added.
- Add an accepted-response worker using the existing delivery
coordinator and scoped deadline helper. Preserve saved retry deadlines
and pending-effect fences under the owner's lock.
- Share the finalization notification boundary. Wake on finalization
settlement, exact accepted-result/final-message evidence, agent
availability, retry admission, and existing chat authority changes.
- Keep lifecycle policy in services. A narrow pre-write status hook lets
lifecycle retain ownership of its transaction and status transitions.
- Register the worker during enabled maintenance startup. Remove its
authority subscription on shutdown. Periodic replay skips this duty on
both committed and fresh-commit paths; ordinary finalization and
explicit recovery retain their behavior.
- Add a partial index and expression statistics for unpresented native
runs. Migration 0412 supports concurrent replay and adds no queue table.
- Add real PostgreSQL and lifecycle coverage. Preserve the
implementation and producer audit in the plan document.

## Verification

- Additional real Photon callback acceptance on the published production
code disproves the security warning: ten active assertions cause zero
response-recovery hints/SELECTs, while three concurrent assertions
during an actual attention-to-active recovery cause exactly one
wake/SELECT. The existing locked status guard already enforces this
boundary. No production change was needed; the resolved finding now has
a successful current-head security check. The regression will be
retained with the next slice.
- Eligibility repair source `892f36e5f66ba1af123034936a7160c64c3ab883`
passes **1489 distinct server cases**: 1139 in six complete
recovery/finalizer/monitor/summary/workspace suites (81.02 seconds),
plus 350 selected chat cases (297.68s). Another 1463 chat cases are
outside the pattern; the complete 1813-case file is not claimed. All
eleven new regressions are included in that count. Five dedicated fresh
PostgreSQL 17 databases migrate through unchanged 0412, with no
fixture-source adaptations. Database build, server types/build,
boundaries and full-SHA migration ordering pass. All seven test source
hashes match.
- The exact published baseline first fails eight behavioral assertions
while the three genuine-answer cases pass. The same corrected test
source passes all eleven after repair: recorded none/reuse remain
suppressed; five ineligible history families take zero recovery row
locks across repeated issue hints; missing/legacy/create-null answers
still publish once; fresh periodic finalization defers presentation to
its worker. Earlier fixture setup and variable/compiler failures remain
explained in the audit, rather than erased by later success.
- Repair source `2fc8b0614aaf9ac7337045de4ced7325f95edc45` passes **1821
server cases**: 1496 in 13 complete producer/lifecycle/authority suites
(110.63 seconds), plus 325 selected chat cases (278.99 seconds).
Coverage includes all native-session cases, queue admission, status
decisions, membership/board access, the complete GitHub workflow,
accepted-response lifecycle and real authority restoration. The other
1477 chat cases are outside this selection; the complete 1802-case file
is not claimed for this repair run.
- Actual PostgreSQL regressions first reproduce a coalesced-input hint
missing its run scope and two routine hint paths producing 12
response-history SELECTs each after three notifications. The same
assertions pass with run-scoped coalescing and zero response-history
SELECTs for unscoped routine hints. Actual membership restoration still
publishes the waiting response once. Assertion time limits are
unchanged; this measures real driver SQL and persisted producer work.
- Eleven dedicated fresh PostgreSQL 17 databases migrate through 0412.
One embedded-only wake-queue fixture import temporarily uses its own
external database and restores byte for byte. All 14 selected source
files match pre-run hashes. This qualifies external-database behavior
rather than reproducing embedded CI locally.
- Master advanced independently with #18126's Pi archive retry fix.
Normal merge `2a535bc61259ef99387369e8b32498f774e5ba2c` preserves both
complete binary patches. All accepted server/database/UI/test/CLI trees
stay identical; the three independent runner installer/manifest files
are retained. All 13 installer tests pass, including stalled header/body
cancellation. Combined server types/build, boundaries and full-SHA
migration order pass. A subsequent normal merge of #18128 at
`e8b78cce5bb557b086bee9ca930eeaab1d09b244` retains its three test-only
file changes with both complete patches preserved. The changed HTTPS
backfill case passes on a fresh PostgreSQL fixture (1 selected case; 178
outside the pattern), and combined types/build, boundaries and migration
order pass again. All 14 repair source hashes remain unchanged. The
independent browser fixture changes are preserved; no local browser run
is claimed.
- The earlier source `9feec170ef8174011fc3c5d3d6d76f0a0f39fea0` passed
the 4171-case full baseline before this scope repair. That scope is
preserved in the audit rather than represented as a current full rerun.
All 0412 database bytes remain unchanged: original concurrent
index/statistics/ANALYZE, prior executable history, journal entries and
retained snapshots. Five snapshots 0408 through 0412 remain. The
populated 0411-to0412 upgrade preserved 410 prior receipts and 38
companies, appended one receipt and none on replay; index/statistic
checks passed.
- The earlier P2 security failure, Greptile's former conditional
dependency on #17702, and the subsequent actual Ponytail eligibility
findings are recorded in
`doc/plans/2026-10-25-native-response-presentation-sleep-audit.md`. This
PR now includes the issue-scoped pending-effect notification fix itself,
so it is independently correct before #17702. Fresh published-head CI,
Greptile 5/5 and a clean security scan remain required. No
deployed-sleep, external-wake or fleet-savings claim is made.


## Risks

- The writer contract is process-local. Independent SQL writers and
other replicas are not covered by these notifications.
- Unpresented backlog reconstruction still has memory and time cost
proportional to candidate count. Pages contain at most 100 rows;
execution uses the shared fair batch. Selected history is excluded.
Health-only signals do not trigger reconstruction.
- Publication policy remains with its current owner. Digest, company/run
binding, source authorization, selected-answer suppression, and
ownership fences remain required.
- The rest of native recovery and governed-review presentation still run
separately. This PR does not relax Cloud sleep eligibility or add
external wake coverage.
- The stack parent has merged and its actual ancestry is reconciled.
This publication still needs fresh current-head CI and review.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, repository tools, shell
execution, and PostgreSQL tests. The runtime does not expose a more
specific model identifier or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Codex <noreply@openai.com>
2026-10-29 02:31:20 -05:00
DottaandPaperclip 4e715eb7ea fix(server): schedule historical unsafe export recovery (#17687)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Native runs can retain accepted results after an unsafe workspace
export fails.
> - Historical recovery can retire an old notice or resume the accepted
result without another provider turn.
> - The periodic reaper repeatedly scans failures that cannot currently
recover.
> - Existing rows and committed changes can identify the actual recovery
obligation.
> - This pull request wakes recovery from those changes and retries only
owed work.
> - Dormant history becomes quiet while ownership and explicit operator
decisions remain protected.

## Linked Issues or Issue Description

**What happened?**

The native finalization reaper repeatedly visits historical unsafe
workspace-export failures. Cancelled tasks, newer runs, changed
contracts, and explicit operator decisions can make those rows
permanently ineligible. They still produce periodic database reads.

**What did you expect?**

Retire stale unsafe-export notices and recover eligible accepted
results. Stop reading dormant history until a relevant committed change
occurs. Keep a retry while a real obligation is blocked by ownership or
a transient failure.

**Steps to reproduce**

Retain an unsafe-export terminal failure whose task is cancelled or
superseded. Leave the instance idle after startup. The periodic reaper
continues reading that history.

Prerequisite #17680 is merged into master. Related: #14402 established
safe export finalization; #14329 was an earlier historical recovery
proposal. #17679 owns separate policy-review cleanup. This PR changes
only historical unsafe-export scheduling and its producers.

## What Changed

- Register a scoped worker through the existing coordinator and
scheduler. Remove this duty from periodic reaping. Preserve the
manual/startup recovery entry point.
- Distinguish stale notices, eligible accepted results, dormant history,
and concrete ownership contention. Reuse the existing mutation owner and
lock order. Preserve explicit settlement vetoes and exact
result/contract identity.
- Signal relevant task, run, action, and deletion writes before they
commit. Existing transaction boundaries handle nested commits and
uncertain outcomes. Notifications contain only scope IDs.
- Retain a retry only for owed work. Reconstruct work at startup,
preserve drain/resume, and stop through the shared lifecycle.
- Add concurrent, idempotent partial index migration 0410 for unsafe
terminal failures. Keep the five newest generated schema snapshots.
- Document producer coverage, query plans, supported writer boundaries,
and test failures in the unsafe-export audit.

## Verification

- Source `2a13dd08a6cc52f0adab09e3df9ce31e97b746b9` passes all 2188
cases across 24 complete files, without skips. The main selection passes
2129 cases in 192.58 seconds; safe-replacement passes 59 in 26.04
seconds. Coverage includes all 968 native-session cases, real
export/action producers, explicit continuation, workspace
reconstruction, interaction routing, Stop, queue and Slack consumers.
The audit gives per-file counts.
- Twenty separate fresh PostgreSQL 17 databases migrate through 0410
before setup. Four embedded-only fixture imports temporarily use their
own external database on this IPC-exhausted host, then are restored byte
for byte. Assertions and timing limits stay unchanged. This is qualified
external-database acceptance, not an unmodified embedded CI run.
- Database build, server typecheck/build, module boundaries and
exact-head migration order pass. Normal integration preserves the
complete original runtime/schema patch and unrelated upstream blobs.
Original concurrent index SQL, all prior executable history, journal
entries and retained snapshot bytes are unchanged; five snapshots 0406
through 0410 remain. Added comment removal preserves the full
non-comment TypeScript token streams.
- A populated 0409-to0410 upgrade preserves all 408 prior migration
receipts and 38 companies. It appends exactly one receipt; replay adds
none. The index is valid and ready on fresh and upgraded databases.
- The owning audit retains earlier fixture failures, skipped checks and
notice-retirement regression history. Older combined stack checks retain
their original scope in their owning audits. Actual parent
`73d24aa5acfcf17b3f676b4da7cd05eb70b60b99` is reconciled through a
normal merge. Its tree equals the reviewed ancestor and the complete
accepted child tree is unchanged. Fresh published-head CI and Greptile
5/5 remain required. No deployed sleep, fleet-cost or live provider
qualification claim is made.

- Inherited prefix correction: current integration
`8f43c9f81fac23b50997e7f0e1d0d9cf383a8109` changes only two values in a
previously unselected corpus fixture. All production code, the complete
package tree and all 24 accepted test files remain byte-identical to the
2188-case source above. The additional complete 72-case corpus passes in
14.00 seconds and again on the same database in 13.08 seconds. Retained
PSC/OUT and sentinel rows remain unchanged. The repeat is not
double-counted. The parent audit retains the original collision and
rejected cleanup attempt.

- Latest parent context: integration
`4d51231abe8b68c21ce896d0d2ac16865978c8ab` carries only the parent's
one-argument GitHub observation correction and an independent master
cleanup assertion. All production code, packages, 24 accepted suite
files and the additional corpus are unchanged. The two focused
native-presentation cases pass in 15.14 seconds and the complete
cleanup-removal suite passes all six cases in 8.31 seconds on two fresh
0410 PostgreSQL fixtures. This does not claim the full parent workflow
was rerun here.

Current head `b28399babac72ba9db1c4a4ef882c5e87aded38c` has passing CI
and Greptile 5/5 with no actionable findings. The first CI attempt lost
runners: fourteen jobs explicitly received simultaneous shutdown
signals, two reported lost runner communication, and two aggregate gates
failed downstream. One failed-job retry on unchanged source passes. The
underlying host shutdown cause remains unconfirmed; no code fix or extra
retry is claimed. [CI run and
attempts](https://github.com/paperclipai/paperclip/actions/runs/40819408528).
No Ponytail verdict is present.

## Risks

- A missing future producer can delay dormant-history discovery until
restart. The audit names current producers. Independent SQL writers and
other server processes remain outside the process-local signal contract.
- Physical ownership and uncertain operations retain retries. Time alone
does not authorize taking workspace ownership. No provider turn or
unsafe archive retry is added.
- The recovery owner remains authoritative if state changes after
discovery. Terminal UI status does not authorize resource destruction or
accepted-result replay.
- The partial index adds matching-row write/storage cost. It builds
concurrently through the existing restart-safe migration runner.
- This proves the changed worker becomes quiet. It does not prove host
suspension, external wake coverage, or fleet cost savings. Other sleep
migrations remain. This slice still requires fresh current-head CI and
reviews.

## Model Used

OpenAI Codex, based on GPT-6, with reasoning and code-execution tools.
The exact serving model ID and context-window size are not exposed in
this session.

## Checklist


- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 00:13:22 -05:00
DottaandPaperclip 51c3f8924c fix(server): schedule cancelled workspace preservation (#17677)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - A cancelled native run may still owe preservation of prepared
workspace files.
> - The existing recovery receipt and source lease record that
obligation.
> - The orphan reaper still searches for these cancellations on every
pass.
> - This PR registers committed cancellations with the shared deadline
worker.
> - The existing retention owner keeps file pinning and ownership
checks.
> - Idle and completed history no longer causes this preservation scan.

## Linked Issues or Issue Description

Refs #17674 and #17145. Stopped instruction collection is merged into
master. It owns file-preservation discovery only. The existing
environment cleanup worker continues to own stop-only teardown.

**What needs to be improved?**

`preserveCancelledNativeWorkspaces` runs from every orphan-reaper pass.
It queries even when no cancelled native workspace needs a file-recovery
hold. Current foreground Stop can also defer retention after a lock or
database failure, so startup-only recovery would be insufficient.

**Why is this improvement important?**

Empty queries keep idle tenants active. Removing them must not lose user
files, weaken Stop ownership, replay cancelled work, or turn a retained
allocation into destructive cleanup.

**Proposed solution**

Register the existing durable obligation from committed run-status,
cancellation-acknowledgement and workspace-reference writes. Reconstruct
it at startup. Keep retries while actual preservation remains
unresolved. Disarm after the existing owner records the hold. Related-PR
search and ROADMAP.md review found no duplicate of this scheduling
migration.

## What Changed

- Add a company/run-scoped preservation worker with 100-row keyset
reconstruction and fair batches of five.
- Separate pending file debt from immediate coordinator/lease readiness.
Retain a 30-second retry for known unfinished preservation and shared
failure backoff for errors.
- Signal the existing status, acknowledgement, workspace-reference,
deletion and settings transactions. Add no table or independent timer.
- Keep exact source checks, no-workspace contracts, task/coordinator/run
lock order, retention receipt and no-replay recovery card with their
owners.
- Recheck cancellation acknowledgement, run status and coordinator phase
under the retention locks. Preserve the existing foreground preterminal
API.
- Keep startup/manual recovery; skip only this duty in periodic reaping.
Preserve drain/standby and shutdown behavior.
- Add concurrent, replay-safe partial index migration 0409 and retain
the five newest snapshots.
- Add the producer and lifecycle audit in
`doc/plans/2026-10-25-cancelled-workspace-preservation-sleep-audit.md`.

## Verification

- Current source `21b46a8e4293ca670235117458b984493a181759`: all 1472
cases in 16 complete files pass without skips. The owner passes 84 cases
in 14.93 seconds. Fifteen consumer files pass 1388 cases in 133.46
seconds, including all 968 native-session cases and Stop, dispatch,
restart, workspace-sync and upgrade-readiness coverage.
- Twelve separate fresh PostgreSQL 17 databases migrated through 0409
before setup. The embedded-only lifecycle fixture temporarily used its
own external database on this IPC-exhausted host and was restored byte
for byte. Assertions and timing limits stayed unchanged. This qualifies
external-database behavior; it does not claim an unmodified embedded CI
run.
- Database build, server typecheck/build, module boundaries and
exact-head migration order pass. The complete original runtime/schema
patch and unrelated current-parent blobs are preserved. Original
concurrent index SQL, all earlier executable history and retained
snapshot bytes are unchanged; five snapshots 0405 through 0409 remain.
- A populated 0408-to0409 upgrade preserves all 407 prior receipts and
38 companies. Exactly one receipt is appended; replay adds none. The
preservation index is valid and ready on fresh and upgraded databases.
- Actual parent `82529741418e138d9d623bf13d2fa22c1ff79d36` is merged
through a normal ancestry reconciliation. Its complete tree equals the
reviewed parent. The entire accepted child tree and all source hashes
are preserved. The audit retains earlier failures, qualifications and
per-file counts. Published head
`b34f0589847f33754ecde9413fd36bf007353d2c` has Greptile 5/5 and all 57
checks passing or skipped. No Ponytail review is present. These checks
do not establish deployed host/database suspension or Cloud alarm
delivery.

## Risks

- Signals cover instrumented single-process writers. Independent SQL
writers and additional replicas need integration.
- Status signals may inspect a run without relevant file debt once. They
do not create recurring work. Discovery and memory still scale with
actual candidates.
- Missing ownership or stop evidence remains pending. Active retries are
intentional while a concrete file obligation is unresolved.
- Retry timing is process-local; startup reconstructs durable debt. The
worker does not overwrite another native-finalizer deadline.
- Admitted database operations may finish after drain begins. Shutdown
joins them. Provider teardown remains with the existing cleanup owner.
- The partial index adds storage and write cost. Its concurrent
migration uses the existing interrupted-index repair path.
- Cloud alarm coverage, sleep eligibility and host suspension are
unchanged. This proves worker behavior, not fleet savings.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, shell tools, and PostgreSQL
tests. The runtime does not expose a more precise model ID or
context-window size for this turn.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-28 22:27:11 -05:00
DottaandPaperclip 8252974141 fix(server): schedule stopped instruction collection (#17674)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Runs can stop while their private instruction edits still need
collection.
> - Existing copy rows and stop evidence describe that unfinished work.
> - The orphan reaper still queries for it on every maintenance pass.
> - This PR activates collection from committed copy and run
transitions.
> - It uses saved retry deadlines when stop proof or collection remains
pending.
> - Active copies and completed history no longer cause collection
polling.

## Linked Issues or Issue Description

Refs #17671 and #17670. Both prerequisites are merged into master.
Captured saves and post-save release remain separate reasons with their
own workers.

**What needs to be improved?**

`recoverStopped` queries instruction copies on every orphan-reaper pass,
even when no terminal run owes collection. A run can become terminal
without changing its copy row, so copy-only notifications would miss
real work.

**Why is this improvement important?**

Repeated empty queries prevent idle tenant instances from becoming
quiet. Removing them must preserve edits, stop proof, current ownership,
and recovery after restart.

**Proposed solution**

Use the existing transaction signals, scoped deadline worker, and
scheduler. Reconstruct eligible copies at startup, signal supported copy
and terminal-run writers, and retain saved retry deadlines for
unresolved work. Preserve the existing collection and directory owners.

Related PR search found the warm agent-file ownership work (#14695),
verified stop boundary (#14311), and task-workspace cleanup (#16464).
This PR does not replace those contracts. ROADMAP.md has no duplicate
migration.

## What Changed

- Add scoped stopped-instruction collection with keyset reconstruction
and fair batches of 20.
- Signal before copy preparation, mutation and adoption writes, and
before terminal run writes in their existing transactions.
- Cover heartbeat, native finalization/restart/session recovery,
execution-control, queue and dispatch producers.
- Signal settings changes and company/agent deletion. Preserve drain,
standby, restart and shutdown ownership.
- Recheck terminal-run eligibility in the due-time claim. Keep terminal
status separate from process-stop proof.
- Retain existing stop checks, attempt limits, saved candidate bytes and
remote-resource fencing.
- Skip only this lane in periodic orphan recovery. Preserve
manual/startup recovery.
- Add concurrent, replay-safe partial index 0408 and retain the five
newest snapshots. Add no table.
- Record the owner and producer audit in
`doc/plans/2026-10-25-stopped-instruction-collection-sleep-audit.md`.

## Verification

- Source `cb2818a8f46ef961f744977a258f0e9042e31a42`: all 1469 cases
across 14 complete files pass without skips in 141.69 seconds. This
includes all 968 native-session cases, filesystem saves, startup,
terminal-run producers, dispatch, queue, execution-control, finalization
and lifecycle.
- Eleven separate fresh PostgreSQL 17 databases migrated through 0408.
The embedded-only lifecycle fixture temporarily used its own external
database on this IPC-exhausted host and was restored byte for byte.
Assertions and timing limits stayed unchanged. This qualifies
external-database behavior; it does not claim an unmodified embedded CI
run.
- Database build, server typecheck/build, module boundaries and
exact-current migration order pass. The original concurrent index SQL is
unchanged. All prior executable migration history, journal entries and
retained snapshot bytes are preserved; the five newest snapshots are
0404 through 0408.
- A populated 0407-to0408 upgrade preserves all 406 prior migration
receipts and 38 companies. It appends exactly one receipt. Replay adds
none. The collection index is valid and ready on fresh and upgraded
databases.
- The normal merge of actual parent
`267842fc3c6e6542deed8a1bcc2c78bec8df7862` preserves both complete
patches, all independent sidebar changes from #18117, and the full
accepted server/package/test trees. The complete sidebar test file
passes all 36 cases on the combined tree. React act warnings remain.
- Prior failures and fixture qualifications remain in the audit.
Published head `d176d731f083c7edd2ede688cb901d1e66d8f1d8` has Greptile
5/5, all 57 checks passing or skipped, and no unresolved review threads.
No Ponytail review is present. These local tests do not establish
deployed host/database suspension or Cloud alarm delivery.

## Risks

- Process-local signals cover instrumented writers. Independent SQL
writers and additional replicas still need integration.
- Terminal-run signals can cause one scoped inspection even if no
instruction copy exists. They do not create a recurring scan.
- Reconstruction and memory scale with actual pending candidates; active
candidates are filtered by the run join.
- Admitted file/provider operations can outlive a later drain request.
Shutdown joins them. Uncertain ownership remains pending rather than
being discarded.
- The partial index adds storage and write cost. Its concurrent
migration uses the existing interrupted-index repair path.
- Cloud alarms, sleep eligibility and provider suspension are unchanged.
Worker quiet is not a claim of deployed host/database sleep or measured
savings.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, shell tools, and
PostgreSQL/filesystem tests. The runtime does not expose a more precise
model ID or context-window size for this turn.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

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Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-28 22:13:57 -05:00