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Author SHA1 Message Date
Devin FoleyandPaperclip c5ca29dbef fix(claude): prepare compatible sandbox runtimes during onboarding (#17259)
## Thinking Path

> - Paperclip connects agent accounts and prepares their execution
environments.
> - A managed sandbox image can outlive the model defaults shipped by
the app.
> - Claude setup skipped installation whenever a CLI was already on
PATH.
> - The selected model then failed its minimum-version check after
sign-in succeeded.
> - This pull request prepares a compatible private CLI before testing
or running it.
> - Cloud onboarding also stops asking customers to run inaccessible
shell commands.

## Linked Issues or Issue Description

**What happened?**

A new managed Cloud stack completed Claude subscription sign-in. Its
environment test then failed because the snapshot contained Claude Code
2.1.263, while the selected `claude-opus-5-5` model requires 2.1.280.
The screen displayed Manual debug commands that a hosted customer cannot
run.

**Expected behavior**

Paperclip prepares its managed runtime before testing the selected
account. A stale image CLI does not require the customer to upgrade a
server package. Failed preparation still blocks hiring. Cloud does not
display manual shell debugging.

**Steps to reproduce**

1. Start a managed sandbox with Claude Code 2.1.263 on PATH.
2. Connect a Claude subscription and select `claude-opus-5-5` on the CLI
lane.
3. Connect the agent. Installation is skipped because the command
exists, then the version gate blocks the hello test.

**Paperclip version or commit**

Source baseline: `6204239cfc8c3be79fc185cf3f468ebaa0ab1e3e`.

**Deployment mode**

Authenticated managed Cloud with a Daytona named snapshot. The
correction also applies to the default CLI in other managed sandbox
transports.

Related work: Refs #14993 sets model/runtime requirements; Refs #15993
changes native defaults on qualified targets. Neither prepares an
outdated default sandbox CLI on this path. Searches found no open
duplicate.

## What Changed

- Check the actual default CLI against the selected model's existing
minimum version.
- When a sandbox's default command is outdated, install the exact
required npm package into a private versioned workspace prefix. Reuse a
compatible private installation. Keep the image's global CLI intact.
- Verify the private executable and use that same command for the
account hello test and normal CLI runs, with matching command metadata.
Probe effort support after preparing that executable so the chosen
effort is retained. Keep the model, account, engine and permissions
unchanged.
- Return safe preparation checks to environment tests and normal run
logs, distinguishing installation failure causes without returning raw
installer output or credential-bearing URLs.
- Exclude provider and Paperclip credentials from the installer
environment. Preserve the existing failing version gate if installation
or verification cannot succeed. Local, SSH and explicit custom commands
remain operator-managed.
- Hide Manual debug and legacy operator check hints on Cloud and while
deployment metadata is unknown; preserve check messages and details.
Retain self-hosted help and the detailed failed checks. Cloud copy asks
for a retry instead of asking the customer to repair the environment.
- Add subprocess-backed runtime controls, an account-probe regression
and mounted Cloud/self-hosted wizard controls. Update development
guidance and the affected capability maps.

## Verification

- Passed all Claude source suites and the server Claude execution suite
on head `c941ae44c22d8dafec0df033a129e39ce4ebd966`: **412 passed**, one
existing opt-in test skipped. These include the new command/effort
ordering, safe installer diagnostics, environment forwarding and run-log
regressions.
- On final head `0ecae0e9304f495a57524158b3700b8e9bc21cb8`, passed **208
tests** across all 174 mounted onboarding wizard tests and 34 Claude
execution tests. The failure fixture includes the real command-bearing
hint, and execution asserts both metadata command fields agree.
- Passed `pnpm -r typecheck`, `pnpm build`, `pnpm check:token-gates`,
`node scripts/check-maps.mjs` and `git diff --check`. Full typecheck and
build were repeated successfully on final head
`0ecae0e9304f495a57524158b3700b8e9bc21cb8`. [Latest-head
CI](https://github.com/paperclipai/paperclip/actions/runs/39879208694)
is green: 54 checks passed and two skipped, including browser E2E and
serialized database suites.
- The new runtime controls execute real subprocesses with a controlled
installer. They cover an old CLI, an already compatible CLI, failed or
ineffective installation, local/custom commands, and an unknown version.
The probe regression asserts that the hello call uses the private
executable.
- A separate non-root local subprocess check installed the real npm
`@anthropic-ai/claude-code@2.1.280` package. Its private command
reported 2.1.280, the simulated image CLI remained 2.1.263, and a second
preparation reused the private copy. This ran on macOS ARM64. It did not
use a provider account, send a model prompt, or prove live Daytona
behavior.
- Attempted `pnpm test:run`. Embedded PostgreSQL initialization failed
after five attempts on this Mac with `Postgres init script exited with
code null`. The unchanged native-session database cases then failed.
Stopped only that full-suite process tree after recording the repeated
startup failure. No full local-suite pass is claimed; Linux CI must
cover those tests.
- The first new subprocess fixture had a quoting syntax error. It was
corrected before the passing focused runs. The one-off real-package
script first required an ESM extension correction, then passed. Logs
retain both attempts. A new execution assertion initially inspected the
final sandbox cleanup shell instead of the launched command; it now
checks execution metadata. A broader directory selection also picked up
generated `dist` tests whose Markdown fixtures are not copied by the
build (two ENOENT failures). The explicit source-suite run above passes;
no generated-test pass is claimed.
- Apex review: **5/5**, reviewed final head
`0ecae0e9304f495a57524158b3700b8e9bc21cb8`, all five earlier findings
addressed and resolved, no new findings.
- Merge, deployment and a fresh live Cloud subscription test are still
required. No customer account or production runtime was changed by this
branch.

## Risks

- An outdated sandbox needs npm registry access and up to 120 seconds
for one bounded installation attempt. A failed or unverified install
continues to block execution.
- The versioned package uses sandbox workspace storage. Compatible
cached copies avoid repeat installation within that workspace. Existing
runtime cleanup and sandbox lifecycle still apply.
- The compatible version comes from the adapter's existing model-version
contract. This does not add a model fallback or change the selected
execution engine.
- No schema, credential, permission, workflow or lockfile change.

## Model Used

OpenAI Codex, based on GPT-6, assisted with implementation and
verification. The exact serving model ID and context-window limit are
not exposed in this session. Capabilities used: code editing, shell
execution, API inspection and test execution.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-22 18:44:53 -07:00
Devin FoleyandPaperclip 650581b2f0 feat: give nested managed checkouts their own restore points (#17257)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - #17248 lets git cache expiration remove a closed issue's worktree
with unsaved work after saving an encrypted restore point
> - Workspaces with nested `.paperclip-repositories` checkouts were
still kept whenever a checkout had unpushed or uncommitted work
> - On one instance that was the second most common reason expiration
skipped a workspace
> - This pull request gives each nested checkout its own restore point
and restores it when the workspace comes back
> - The benefit is that multi-repository workspaces can be cleaned up as
safely as single-repository ones

## Linked Issues or Issue Description

Refs #17238, #17241, #17248. Bug report described in-PR (bug report
template).

**What happened?**
With restore points enabled, a workspace whose nested managed checkout
has unpushed commits or uncommitted files is still skipped with
`unpushed_managed_checkout` or `dirty_or_untracked_files`. On one
instance, `unpushed_managed_checkout` accounted for 32 of the last 111
expiration checks.

**Expected behavior**
A nested checkout's unsaved work is saved like the main worktree's, and
the workspace can expire and later be restored exactly.

**Steps to reproduce**
1. Use a project with an extra repository, so the task worktree contains
`.paperclip-repositories/<name>`.
2. Commit in that checkout without pushing, then close the issue.
3. With restore points enabled, the workspace is never expired.

**Paperclip version or commit:** `master` at 6d44b80a5e.
**Deployment mode:** any.
**Agent adapter(s) involved:** not adapter-specific (core).

## What Changed

**Relaxed checkout check** (`assertReproducibleManagedCheckout(..., {
restorePoint: true })`, used only in restore point mode):
- **Allowed:** the checked-out branch's unpushed commits, plus its
uncommitted, untracked and history-only work.
- **Still blocks:**
- another local branch or tag whose tip the remote lacks and `HEAD` does
not contain (`unpushed_managed_checkout_branches`), because restore
points do not recreate other branches;
- commits in any reflog that are neither on the remote nor in the
bundled history (`HEAD`'s reflog and `ORIG_HEAD`), such as work left in
another branch's reflog;
  - objects reachable from nothing;
  - a `COMMIT_EDITMSG` that matches no commit in the checkout's history.
- **`COMMIT_EDITMSG`:** a nested checkout is a full clone, so its base
git storage check now accepts a `COMMIT_EDITMSG` that matches a commit
in its history, in strict and relaxed mode. It is read only if it is a
regular file of at most 64 KB, opened without following symlinks and
without blocking; anything else keeps the workspace
(`unsupported_commit_message`). The main worktree's existing
`COMMIT_EDITMSG` read uses the same bounded reader. A clean checkout
with only an unpushed commit therefore reports
`unpushed_managed_checkout`, which restore point mode can relax, instead
of `unknown_base_git_files`.

**Capture** (`git-workspace-expiration.ts`):
- **Expiration flow:** strict inspection still runs first.
`unpushed_managed_checkout` is now relaxable. The relaxed prover records
which checkouts need restore points.
- **Storage:** each checkout's restore point is stored under
`.../<generation>/checkouts/<name>/<id>.pcrp`, against a remote-verified
boundary from that checkout. It is recorded on its
`contents.checkouts[]` entry.
- **Activation:** all restore points of the generation are activated
together in the archive transaction. Any nested restore point makes the
recipe `paperclip.git-cache-restoration.v2`, so older servers reject it.
- **Schema:** migration `0374` adds `checkout_name` to
`execution_workspace_restore_points` and includes it in the
live-generation unique index.
- **Final check:** under the expiration locks, each checkout with a
restore point gets the relaxed check and must match its own snapshot.
Checkouts without one get the strict check and must still be clean.
Every restore point, the main worktree's included, records a digest of
its `HEAD` reflog and `ORIG_HEAD` at capture, and that history must be
unchanged, so a commit followed by a reset after capture rolls back.
Rollback drops every restore point reference, returns the recipe to v1,
and supersedes the stored restore points.

**Restore** (`git-workspace-contents.ts`):
- **Re-cloned checkouts:** re-cloning a checkout imports its bundle
before the saved commit is needed. After checking out the saved commit,
it applies and verifies the restore point.
- **Existing checkouts:** the same helper as the main worktree marks a
matching checkout applied, and fails closed instead of overwriting a
diverged one.

**Validation:** `readGitCacheRestoration` and
`savedGitWorkspaceRestoration` validate nested restore point references
against their checkout names. Contents comparison ignores the reference.

**Docs:** `doc/recoverable-disk-cleanup.md` describes nested checkouts.

No code comments were added.

## Verification

- `pnpm exec vitest run src/__tests__/git-workspace-expiration.test.ts
-t "restore points for nested checkouts"` (in `server/`): 10 passed,
with a real nested checkout and embedded Postgres. The cases:
- **Round trip:** an unpushed commit and an untracked file in the nested
checkout survive expiration and reopen. The recipe is v2, the restore
point lives on the checkout entry, and a ledger row carries the checkout
name.
- **Another branch:** unpushed work on another local branch keeps the
workspace.
- **Change after capture:** a nested change after capture rolls back,
keeps the files, returns the recipe to v1, and supersedes the restore
point.
- **Only an unpushed commit:** a clean nested checkout with only an
unpushed commit (and its `COMMIT_EDITMSG`) expires and restores.
- **Reflog-only history:** unpushed history held only in another
branch's reflog keeps the workspace.
- **History after capture:** a commit followed by a reset after capture
rolls back, in a nested checkout and in the main worktree.
- **Unsafe `COMMIT_EDITMSG`:** a named pipe, an oversized file, or a
symlink keeps the workspace without reading it unsafely.
- **Mutation checks:** each of these fails a case:
- removing the other-branch check, the per-checkout snapshot check, the
rollback cleanup, or the checkout apply;
  - rejecting a saved `COMMIT_EDITMSG`;
  - dropping reflog coverage;
  - dropping the history digest check;
  - removing the size cap.

Not covered by a dedicated case: a workspace with two nested checkouts
where only one has a restore point.
- `pnpm exec vitest run git-workspace-expiration git-workspace-contents
git-restore-point execution-workspaces` (in `server/`): 232 passed.
- `pnpm run check:migrations` (in `packages/db`): pass.
- `pnpm run typecheck` (in `server/`): pass.
- The server builds, the runtime bundle builds, and
`scripts/server-boot-smoke.sh node server/dist-runtime/index.mjs`
reaches healthy.

## Risks

- **Off by default:** nothing changes unless
`PAPERCLIP_GIT_RESTORE_POINTS_ENABLED=true`.
- **Other local branches:** a nested checkout's other local branches are
not saved. Any of them with commits the remote lacks keeps the workspace
instead.
- **Migration:** adds a defaulted column and replaces one partial unique
index on a table only written when restore points are enabled.
- **Rollback:** disable the setting. Workspaces already expired with
nested restore points keep v2 recipes that require this code to restore.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), 1M context, through Claude Code
with tool use (shell, file edits, tests, local server builds and boots,
read-only measurements on live instances).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [ ] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-22 18:42:22 -07:00
Nicky LeachandPaperclip 989ee668e0 Support provider-owned fresh retry workspaces (#17252)
## Thinking Path

> - Paperclip coordinates AI agents and retains their work across
failures.
> - A retry can require a new workspace while preserving the failed
attempt.
> - Core rejects this recovery strategy for provider-owned storage.
> - Providers should implement the required outcome using their own
storage design.
> - This pull request adds a semantic fresh-preparation contract and
delegates recovery preparation.
> - The benefit is that a supported provider can run a fresh retry
without losing prior work.

## Linked Issues or Issue Description

**What happened?**
A retry that selects `fresh_isolated_workspace` fails with
`fresh_workspace_storage_unsupported` for provider-owned storage.

**Expected behavior**
Core asks a capable provider to prepare new storage and attach verified
recovery files. The failed workspace remains intact.

**Steps to reproduce**
Run a task in a task-capable plugin environment. Let the task fail
without a verified workspace preservation receipt. Retry the task so
Core selects a fresh attempt.

**Paperclip version or commit**
6204239cf (rebased on current master).

**Deployment mode**
Self-hosted server with a plugin task environment and managed workspace
provider.

Search found no duplicate implementation. This branch includes the
default-provider changes from #17247 and preserves their source
selection behavior.

## What Changed

- Define an opt-in fresh-preparation contract with a stable attempt
identity and verified recovery file descriptors.
- Describe retained-storage and recovery-attachment guarantees without
requiring a Git storage layout.
- Reserve replacement task bindings with revision checks and keep the
failed workspace intact. Projectless and project-backed task
environments both replay their stable attempt reservation.
- Reconcile an interrupted preparation against its reserved workspace
and stable operation identity.
- Stage verified recovery archives at stable transfer paths. Delegate
attachment materialization to the provider.
- Preserve projectless attempt directory identities through later turns
and pin the intent into each execution lease.
- Protect fresh intent and projectless ownership from caller metadata
replacement or injection.

## Verification

- SDK workspace-provider tests: 4 passed.
- Targeted reservation and task-dispatch tests: 31 passed.
- Recovery transfer staging and lifecycle focus: 7 passed. The separate
cache-cleanup failure reconciliation case also passed.
- After rebasing on current master, 7 focused preparation and ownership
cases passed. These cover inherited provider defaults, fresh
preparation, stable projectless identity, and authorization denial.
- The focused metadata authority regression passed, including forged
intent, replacement, and null metadata patches.
- Three assembled interrupted task-reservation cases passed:
projectless, project with a saved source, and project with a newly
selected default source.
- Targeted tests use worktree SDK sources. No full local build or
typecheck ran.
- Local checks remain targeted as requested. Latest-head GitHub CI
passed: 54 successful checks, including typecheck, build, server suites,
Runner validation, and E2E shards; 2 unrelated Storybook checks were
skipped.
- Greptile reviewed commit 73595b0c61 at
5/5 with zero unresolved threads.
- Live VM E2E has not run.

## Risks

- Existing providers retain their existing behavior. Fresh attempts
require explicit version support.
- The companion provider implementation must materialize recovery
snapshots safely and preserve the old workspace.
- Fresh retries require the companion provider implementation. Providers
without the version marker fail closed.

## Model Used

- OpenAI GPT-6.1 (`gpt-6.1-sol`), reasoning and coding tools. The
runtime does not expose the context-window limit.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-22 17:46:27 -07:00
Nicky LeachandPaperclip 6204239cfc Support installed default project workspace providers (#17247)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Storage plugins already own project storage and task checkout
preparation.
> - Core only selected these plugins through an explicit project policy.
> - Installation could therefore leave new and existing projects on
incompatible Core preparation.
> - This pull request adds one generic manifest declaration and one
shared effective-policy resolver.
> - Project configuration shows inheritance while durable workspace
bindings retain their owners.

## Linked Issues or Issue Description

**Subsystem affected**

Plugin contracts, project configuration, and execution workspace
preparation.

**Problem or motivation**

An installed storage provider cannot become the company default.
Projects without an explicit provider keep Core preparation, even when
their execution environment cannot use a Core Git checkout.

**Proposed solution**

A provider declares supported `workspaceProvider.defaultForProjects`
mode and strategy. Company-enabled installations supply inherited
defaults. Explicit plugin selections and explicit Core/local
(`storageProviderPluginId: null`) win. Conflicting defaults require an
operator choice. The declaration and implementation contain no
provider-specific identifiers.

**Alternatives considered**

Rewriting every project would lose the distinction between inheritance
and overrides. Selecting by worker health would silently change storage
on an outage.

**Roadmap alignment**

Extends the existing workspace and sandbox provider contracts. The
roadmap has no duplicate default-provider implementation. Related public
work includes #17243, which covers prepared execution directories rather
than provider selection.

## What Changed

- Add a validated generic default-provider declaration and document it
in the SDK.
- Resolve provider selection and Git defaults consistently in project
responses, source selection, heartbeat source resolution, reservation,
and preparation.
- Keep stored policy separate from effective configuration. Add the
normal project configuration selector for inheritance, explicit plugins,
and Core/local.
- Preserve existing local and plugin workspace ownership. Pin selection
through preparation and keep provider failures visible.
- Add database, API, manifest, heartbeat, and UI regressions. Update the
verification maps.

## Verification

- Targeted Vitest runs cover manifest validation, project defaults and
API access, explicit overrides, existing ownership, new/imported task
inheritance, heartbeat routing, source-free tasks, selection pinning
during setup, and UI configuration.
- Combined policy, provider integration, and heartbeat run: 58 tests
pass; 60 unrelated cases excluded. After the final shared-provider
fallback fix, all 47 policy tests pass, including shared and
operator-mode regressions.
- Server and UI TypeScript checks, SDK build, verification-map
validation, credential-pattern scan, added-comment scan, and `git diff
--check` pass.
- A downstream integration uses this Core resolver and preparation
service with a real storage hook and mocked remote infrastructure. A new
Git project reaches the hook without a stored provider ID.
- Standard Greptile and Apex both scored 5/5 on
5d42998466. All review threads are
resolved.
- Final GitHub CI is fully green on
5d42998466. Browser shard 3 initially hit
a PostgreSQL deadlock during cleanup cancellation, which left an
experiment flag enabled for a later test. A failed-job retry passed all
26 browser tests. The workflow completed successfully on attempt 2. Full
final verification was delegated to CI at the user's request.
- No live provider or hosted tenant run was performed.

## Risks

- Installing one default-claiming provider changes effective selection
for unconfigured projects. Existing explicit settings and workspace
ownership remain intact; incompatible explicit settings fail clearly.
- Each configuration/admission resolution reads installed plugin
metadata and the selected company's enablement. Project list reads share
one catalog query. Selection does not call workers or external
providers.
- Deploy the Core contract before any downstream manifest uses the
declaration. No migration or backfill is required. A downstream
immutable image pin must include this change before packaging its
declaration.
- No merge or deployment is authorized by this PR.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, repository tools, and code
execution. The exact served model ID and context-window size are not
exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have described the issue in-PR following the relevant issue
template
- [x] I have not referenced internal/instance-local Paperclip issues or
links
- [x] My branch name describes the change and contains no internal
ticket id
- [x] I have run targeted tests locally and they pass; full gates are
delegated to CI at the user's request
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green on
5d42998466ad42400564ba34f48124f40c53fbc5; the branch has no merge
conflicts
- [x] Standard Greptile is 5/5 on 5d4299846 after all fixes, with no
unresolved threads
- [x] Apex is 5/5 on 5d42998466, after
standard Greptile 5/5 on that same head
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-22 17:12:29 -07:00
DottaandPaperclip 9bf7dc0c8f feat(agents): bulk edit connections and default models (#17215)
Add harness-scoped bulk connection and default-model edits to the agent roster, with compatible choices, change previews, per-agent save results, and retries.

Use an icon-based harness filter, keep agent rows readable, remove the status selector and selection hint, and redirect legacy status URLs to the full roster.

Preserve authorization, audit history, unrelated settings, and optimistic concurrency checks through the existing agent update route.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-22 18:47:06 -05:00
Dotta 46760cc588 fix(chat): honor dismissal for all composer requests (#17218)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Task conversations show requests in the feed and above the message
composer.
> - Earlier fixes kept dismissed questions in history, but excluded
completion reviews and other request kinds.
> - Closing those forms left a pending badge, and the server could still
demand a response.
> - This pull request saves human dismissal and removes the request from
composer reminders and ordinary completion gates.
> - People can continue the conversation and reopen the request from
history.

## Linked Issues or Issue Description

Related work: #15229 and #15392.

**What happened?**

Dismissing a completion review closed its form but left it counted as
pending. It could return after reload, block a retry, or cause the agent
to demand another response. Raw runtime requests could also lose their
only usable control when dismissed.

**Expected behavior**

Dismissal leaves an accessible request in the feed and clears the
composer form and pending count. It persists after reload. It does not
submit an answer, approve an action, or wake the agent.

**Steps to reproduce**

1. Open a task with a pending completion review or another composer
request.
2. Dismiss the request, then reload the task.
3. Check that the composer stays clear and the feed entry can reopen the
request.

## What Changed

- Add nullable dismissal fields and a human-only dismissal endpoint with
company, private-task access, resolver, and locked review-policy checks.
- Persist saved-request dismissal on the server. Keep browser
persistence for raw runtime requests and existing question dismissals.
- Keep confirmations, choices, item verdicts, suggested tasks, and
runtime requests accessible in the feed.
- Exclude dismissed ordinary requests from completion and retry gates.
Tell agents not to repeat deferred requests.
- Preserve tool, secret, connection, plan, company-policy, and
configured review authorization gates. Expire deferred non-question
requests when their task completes.
- Preserve the selected form when another dismissal finishes saving.
Keep reopened reviews visible through delayed comment refreshes.
- Add a completion-review Storybook test drive and update design, API,
database, and capability documentation.

## Verification

- `pnpm -r typecheck`: passed. The final UI changes also passed the UI
typecheck.
- `pnpm build`: passed. The final UI changes also passed the UI
production build.
- Focused UI and transcript tests: 550 passed across nine files after
merging the current base branch.
- Focused database, completion, and prompt tests: 105 passed across
three files, including two review-policy regressions that failed before
the fix. The tests reject a review requester excluded by current policy,
preserve the pending gate on denial, and permit an independent reviewer
to defer the request.
- Route regression suite: 81 passed, including denial before reading or
mutating a private-task request.
- `pnpm check:token-gates`: passed.
- Map and Storybook structural checks: passed; 30 map/catalog script
tests passed.
- Browser: used the production task-thread components in the
completion-review fixture. Dismissed, reloaded, reopened from the feed,
and dismissed again. No pending badge or composer takeover remained.
Story callbacks simulate API saves; separate server tests cover
persistence and permissions.
- `pnpm test:run`: stopped after the general-server group reported one
failure in `workspace-runtime.test.ts`: "returns a bounded structured
conflict and exposes only same-company workspace references". The same
test passed in isolation (1 passed, 178 skipped). The cause of the
full-suite failure is not established. The full PR CI suite subsequently
passed on e243cbb001; its two authorization review findings are fixed in
9e1b4478b3. Fresh [full
CI](https://github.com/paperclipai/paperclip/actions/runs/39871944846)
passes on 9e1b4478b3, including the previously failing server and
browser shards. All 54 executed checks passed; two optional Storybook
deployment/visual jobs were skipped. The legacy security status also
passed. Fresh Greptile review is 5/5, the security scan passes, and no
review threads remain open. This full CI run settles the merge gate; the
earlier local workspace-suite failure remains recorded above because its
cause was not established.
- Additional verification: the original failing browser journey passed
locally after the delayed-refresh fix. The expanded page-reload case
also passes on 9e1b4478b3 (52.7s): dismiss, reload, reopen, approve, and
receive the actual tool failure in the continuing task. It exposed a
fixture reading an accepted request before tool execution finished; the
fixture now waits for a stored execution result. The first reload
attempt stopped on a still-loading page at the default five-second
assertion; the reload now uses the suite’s navigation allowance. A
controlled server-restart run timed out waiting for server health before
the UI assertions. Local route-suite runs timed out during concurrent
module loading; sequential imports passed all 81 tests, including the
privacy regression.
- Initial verification failures: a missing SDK build and a story fixture
type error were fixed. PostgreSQL bootstrap then failed because the host
had exhausted its semaphore allowance. After explicit operator approval,
64 verified abandoned PostgreSQL semaphore sets were reclaimed; no live
process was stopped. The database regressions then passed. The
raw-runtime regression exposed a missing feed control; the
implementation now preserves that entry and the regression passes.

## Risks

- Apply the additive database migration before the new server code. It
adds two nullable columns and does not change existing decisions.
- A dismissal is shared task attention state. Only a human with task
read access and current resolver/review authority can persist it. Review
policy is checked under the task lock. The operation is idempotent and
records the dismissing user.
- Raw runtime dismissal remains specific to a browser. Saved interaction
dismissal persists across browsers.
- A deferred review is not an approval. Tests retain protected-action
and configured review gates.
- The browser walkthrough uses a fixture. This branch has not been
deployed to a live instance.

## Model Used

OpenAI Codex, GPT-6, with code execution and browser tools. The exact
backend model ID and context-window size are not exposed in this
session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge
2026-10-22 18:37:36 -05:00
DottaandPaperclip 042051904d fix(codex): deliver configured service secrets to shell tools (#17216)
## Thinking Path

> - Paperclip lets operators assign tools and credentials to agents.
> - Legacy Codex starts provider processes and builds a separate shell
environment policy.
> - Both ACP and CLI removed every variable whose name contained KEY,
SECRET, or TOKEN.
> - This also removed service credentials that the operator explicitly
assigned, such as SLACK_BOT_TOKEN.
> - This pull request uses the resolved configuration to admit assigned
service secrets by name.
> - Every Codex launch keeps a bounded shell allowlist, including
launches without an agent identity.
> - Assigned scripts can use their credentials without adding unassigned
host secrets to shell tools.

## Linked Issues or Issue Description

Related: #16255. That PR fixes project-level exclude patterns. This PR
fixes the removal of explicitly assigned service secrets and the
fallback to an inherited policy when no agent identity is present.

**What happened?**

A Codex task could not run a Slack posting script. SLACK_BOT_TOKEN was
present in its resolved launch environment, but Paperclip removed its
name from shell_environment_policy.include_only. A live removal check
also showed that an identity-free launch without an explicit policy
could inherit an unassigned host token.

**Expected behavior**

An explicitly assigned service credential reaches shell commands.
Removing that binding removes its shell access on the next launch.
Unassigned host credentials stay outside the allowlist. Codex login
credentials and observability headers keep their separate provider
paths.

**Steps to reproduce**

1. Configure a Legacy Codex agent with a synthetic SLACK_BOT_TOKEN
value.
2. Run a shell command that checks whether the variable exists without
printing its value.
3. Before this fix, the variable is absent. Repeat through ACP and CLI.
4. Remove the binding and run a second turn. Check that neither the
removed token nor an unassigned host token reaches the command.

**Paperclip version or commit**

Reproduced in the executor regressions before the fix on master at
4dfcb4c9b8. The final change is rebased on 25f2d05282.

**Deployment mode**

Source checkout. Local macOS arm64 provider acceptance with Codex CLI
0.160.0 and Codex ACP 1.6.2, gpt-5.6-sol, and an existing ChatGPT login.

## What Changed

- Added one shared Codex shell-name policy for Legacy ACP and CLI
execution.
- Admit explicitly resolved service-secret bindings. Keep Codex login
keys, observability credentials, and private runtime transport tokens
outside that opt-in.
- Reject glob-shaped environment names so one configured name cannot
match other credentials.
- Always emit the bounded policy. Do not fall back to host inheritance
after a binding is removed.
- Updated executor regressions, the identity contract, and the paired
verification maps.

## Verification

- Red before the fix: executor regressions failed because
SLACK_BOT_TOKEN was absent in ACP and CLI, with and without agent
identities.
- Green: 267 tests passed across the two executor suites and the shared
shell-policy suite. Coverage includes host/provider isolation,
unresolved and removed bindings, glob names, identity delivery, and
names-only metadata.
- The complete Codex adapter source suite passed after the CI follow-up:
571 tests passed, 1 skipped across 31 files. Its typecheck also passed.
- The first CI run caught four stale expectations in ACP config and SSH
launch tests. Those now assert the bounded policy and the existing
command/resume behavior. No production code changed in that follow-up.
- Live CLI and ACP acceptance: run a Python presence check through each
real adapter, remove the synthetic Slack binding, and run again. The
assigned token was present only on the first turn. The unassigned host
token and OpenAI API key were absent on both turns. CLI retained its
session; ACP correctly invalidated its session after the configuration
changed. Workspace proof files persisted.
- An earlier live CLI check failed after binding removal because the
no-policy fallback exposed the synthetic host token. The final change
removes that fallback. Both live checks then passed.
- Full pnpm -r typecheck and pnpm build passed. The changed packages
were compiled again after the safety correction.
- node scripts/check-maps.mjs and git diff --check passed.
- The local pnpm test:run attempt reported failures in native
warm-session tests and was interrupted. That full-suite result is not a
pass; PR CI must establish the final repository-wide gate. One named
native failure passed alone, and the complete native executor file then
passed separately (774 tests). The original broad-run failure cause
remains unconfirmed.
- After rebase, one Gemini skill-root case timed out at five seconds
while the broad run was active. The case passed alone, and the full
focused set then passed again at the PR head (267 tests). The earlier
timeout remains part of the verification record.
- An initial broad adapter run failed because sandbox restrictions
denied loopback listeners. Running the same suites with loopback access
passed.

## Risks

- Explicitly assigned service secrets now reach shell commands. This is
the intended behavior change: assigning a credential authorizes the run
to use it, and a model-directed command can read it. This is not a
broker that hides assigned credentials from the model. Operators must
assign only credentials and service permissions authorized for the run.
Configuration and secret-access authorization remain with their existing
owners.
- Superagent initially flagged this intended assigned-credential
exposure as a P2. The inline reply records the trust-model rationale and
the documentation states it explicitly. The security scan on the final
documented revision passed without any check override.
- The launch policy contains names, not values. Log redaction remains in
place. Provider login credentials and observability headers remain
excluded from the service-secret opt-in.
- Identity-free Codex runs now also receive a bounded policy. This
removes reliance on the operator's inherited shell policy.
- Existing explicit project exclude patterns retain their behavior;
#16255 addresses that separate case.
- The change has not been deployed to a shared instance.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, repository tools, and code
execution. The exact served model ID and context-window size are not
exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with Fixes / Closes /
Refs OR (b) described the issue in-PR following the relevant issue
template
- [x] I have not referenced internal/instance-local Paperclip issues or
links
- [x] My branch name describes the change and contains no internal
Paperclip ticket id or instance-derived details
- [x] I have run the focused tests locally and they pass; the full-suite
limitation is recorded above
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-22 18:17:34 -05:00
Devin FoleyandPaperclip 12bb7e1976 feat: track git workspace restore points and apply their retention (#17241)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Closed issues' git worktrees pile up on disk because they can only
be removed once the remote reproduces them exactly
> - #17238 adds restore points: encrypted saves of the unpushed and
uncommitted parts of a worktree, so the worktree itself can be removed
> - Those saves live in file storage and must be deleted on a schedule,
and promptly when their issue or company is deleted
> - This pull request adds the table that tracks restore points and a
deadline-driven retention worker, with nothing creating restore points
yet
> - The benefit is a reviewable lifecycle foundation before capture is
wired into expiration

## Linked Issues or Issue Description

Refs #17238 (restore point library). Bug report described in-PR (bug
report template).

**What happened?**
Closed issues' worktrees accumulate without bound. For example, one
instance's last 111 git cache expiration checks removed nothing, because
each worktree held unpushed commits or uncommitted files. Restore points
(#17238) will let those worktrees be removed safely. That needs a
durable record of every stored restore point and a retention policy for
deleting them.

**Expected behavior**
- A restore point is kept while its work can still resume.
- It is deleted a fixed time after its issue tree closes.
- It is deleted promptly when its issue or company is deleted.

**Steps to reproduce**
Not applicable on its own: this adds the lifecycle that the capture
integration will use.

**Paperclip version or commit:** `master` at def4726bea.
**Deployment mode:** any.
**Agent adapter(s) involved:** not adapter-specific (core).

## What Changed

**New table `execution_workspace_restore_points`** (migration `0372`,
schema `packages/db/src/schema/execution_workspace_restore_points.ts`):
- **Columns:** storage key, sha256, size, generation, source issue,
`status`, closing time, review/deletion time (`delete_after`), a
`review_generation` counter and last error.
- **Statuses:** `pending`, `active`, `expiring`, `superseded`,
`delete_requested`, `deleted`.
- **No foreign keys:** a row outlives the deletion of its workspace,
issue or company long enough to remove the stored object.
- **Indexes:**
  - the storage key is unique;
  - live generations are unique per workspace;
- an index on status and deadline serves the worker, and a partial index
on active rows' source issue serves the trigger.

**Issue tree trigger** (same migration):
`paperclip_restore_point_tree_changed` runs after an issue's `status` or
`parent_id` changes, and after an issue is deleted. It walks up from the
issue and from its old and new parents (at most 64 levels). For every
active restore point whose source issue is in that set, it makes the row
due now (keeping an earlier due time) and increments
`review_generation`. This happens in the same transaction, so a child's
deletion or move still reaches its former parent's tree.

**New `server/src/services/git-restore-point-ledger.ts`:**
- **`gitRestorePointRetentionService(db, { storage, retentionDays,
beforeExpire })`.** Each `tick` handles only due work, in batches of 50:
- **Review:** an active restore point is checked when its `delete_after`
time arrives. The due check compares against the later of the worker's
clock and the database clock, so a row the trigger just marked is never
skipped. At review:
- **Tree still open:** clear `delete_after`. The trigger marks it due
again on the next relevant issue change, so open trees cause no
recurring checks.
- **Tree `done` or `cancelled`:** expire
`PAPERCLIP_GIT_RESTORE_POINT_RETENTION_DAYS` (default `90`, minimum `1`)
after the tree's latest close. Expiry moves the row to `expiring`, then
runs an optional `beforeExpire` hook, which the capture integration will
use to mark the workspace no longer restorable. Only then does it
request deletion. An `expiring` row's object is never deleted: after a
restart, or if the hook fails, the hook is retried (after 15 minutes
when it failed).
    - **Source issue gone:** delete.
- **Concurrency:** a review result is written only if
`review_generation` is unchanged since the worker read the row. If the
trigger fired in between (for example, the tree closed or reopened), the
write is skipped and the row stays due for the next run. Expiry and
orphan deletion claim the row under the same check before the expiry
hook runs.
- **Abandoned captures:** a `pending` row older than one hour is
deleted.
- **Deletion:** `superseded` and `delete_requested` rows have their
object removed. They become `deleted` only once `headObject` reports the
object gone. Failures, including a local unlink error the provider
swallows, are recorded in `last_error` and retried after 15 minutes.
- **`nextDeadlineAt`** returns the earliest real deadline, or `null`
when nothing is due.
- **`requestRestorePointDeletion(tx, { sourceIssueId } | { companyId
})`** registers a delivery-work notification and marks the matching
`pending`/`active` rows `delete_requested` in the caller's transaction.

**Deletion hooks:**
- `issueService.remove` and `deleteCompany` call
`requestRestorePointDeletion` in their transactions, so a deleted
issue's or company's objects are removed promptly.
- Child issues cannot be deleted with their parent (the parent link
restricts deletion), so each issue removal goes through this hook.

**Scheduling** follows `rules/sleep-aware-background-work.mdc`:
- `registerGitRestorePointWork` registers a `git-restore-points` queue
with the shared delivery-work coordinator.
- The worker keeps no in-memory inputs. Due work is recorded in the
table, by the trigger or by deletion requests. Each run handles it and
schedules only `nextDeadlineAt`, so a failed run loses nothing and is
retried by the coordinator.
- It runs at startup, at real deadlines, and when terminal-workspace
notifications settle after issue changes, but only while restore points
exist. With nothing due, it schedules nothing. A full batch continues
immediately. There is no timer.

**Config and docs:**
- `server/src/config.ts` adds
`PAPERCLIP_GIT_RESTORE_POINT_RETENTION_DAYS`.
- `doc/recoverable-disk-cleanup.md` gains a "Git workspace restore
points" section; `doc/DEVELOPING.md` documents the variable.
- `drizzle-kit generate` pruned `meta/0367_snapshot.json`, following the
repository's snapshot-retention convention.
- No code comments were added.

## Verification

- `pnpm exec vitest run src/__tests__/git-restore-point-ledger.test.ts`
(in `server/`): 26 passed against embedded Postgres, stable across
repeated runs. The cases:
- **Review outcomes:** an open tree clears its deadline and schedules
nothing; a closed tree is scheduled 90 days after its close; a
long-closed tree expires and is deleted; a missing source issue is
deleted.
- **Expiry durability:** a failing hook keeps the row `expiring` with
its object until a retry succeeds; an `expiring` row left by a restart
resumes the hook before deletion; an `expiring` row's object is never
deleted while its hook fails.
- **Trigger:** the last open child closing, a child being deleted, a
child moving to another parent, and the source issue's own status change
all mark the restore point due. Unrelated issues, inactive rows and
already-due rows are untouched. End to end, an open tree's restore point
waits without a deadline, then is scheduled 90 days after its tree
closes.
- **Races:** closing the tree, or reopening it, between the worker's
read and write leaves the row due, and the next run resolves it
correctly. A reopened tree's restore point is not deleted.
- **No rescanning:** 60 retained restore points with future review times
are not evaluated. A backlog of 60 due ones is processed as 50, then 10,
then nothing.
- **Captures and deletion:** abandoned pending rows are deleted while
recent ones are kept; superseded rows are deleted; an object still
present after deletion is not marked deleted; a failed deletion is
retried only after its 15-minute deadline.
- **Deadlines:** the next deadline is correct for each obligation, and
`null` when idle.
- **Deletion hooks:** `issueService.remove` marks only that issue's
restore points, and `deleteCompany` marks all of the company's; the
worker then deletes their objects.
- **Worker:** schedules nothing when idle, and only the next deadline
otherwise; wakes on issue changes only while restore points exist.
- **Mutation checks:** each of these fails at least one case:
  - removing the issue hook or the company hook;
  - making the trigger ignore former parents;
- removing the worker's generation check or the trigger's generation
bump;
- letting storage cleanup delete `expiring` rows, or not resuming the
hook;
  - ignoring open trees;
  - removing the deletion verification;
  - evaluating rows that are not due;
  - dropping the retry deadline.
- `pnpm exec vitest run company-deletion issue-delete issues-service
delivery-work issue-tree` (in `server/`): 190 passed.
- **CI note:** one earlier `Typecheck + Release Registry` run was
cancelled when the GitHub runner received a shutdown signal; it is not a
code failure.
- `pnpm exec vitest run` (in `packages/db`): 211 passed. One run had a
single failure in `issue-comment-derived-attribution-migration.test.ts`,
an older migration's test unrelated to this change. It passed alone and
on the full re-run.
- `pnpm exec vitest run
src/__tests__/git-restore-point-ledger-config.test.ts`: 5 passed.
- `pnpm run check:migrations` (in `packages/db`): numbering and safety
checks pass.
- `pnpm run typecheck` (in `server/`): pass.

## Risks

- **No behavior change today:** nothing creates restore points yet. The
worker runs once at startup, finds no rows and schedules nothing. The
capture integration follows in a separate PR.
- **Trigger cost:** every issue status change, parent change or deletion
now runs a short ancestor walk, plus an `UPDATE` on the new table that
matches only active restore points through a partial index. With no
restore points, the `UPDATE` matches nothing.
- **Missed wakes:** if a wake is ever missed, for example because the
process exits after commit, the due row stays in the table. The worker's
startup run or next deadline processes it.
- **Deletion paths:** issue and company deletion each gain one `UPDATE`
on the new table inside their existing transactions.
- **Migration:** `0372_mature_the_initiative.sql` creates one empty
table, its indexes, and the trigger function with two triggers on
`issues`; nothing is rewritten.
- **Rollback:** revert. The table can stay, since nothing else reads it.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), 1M context, through Claude Code
with tool use (shell, file edits, tests, read-only measurements on live
instances).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [ ] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-22 15:52:04 -07:00
TonioandClaude Fable 5.1 341b622604 feat(ui): Artifacts V1 behind an experimental setting — Artifacts page, panel tab and task thread (#17228)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Agents produce artifacts: documents, files, pictures, video and
links. The app shows them on the Artifacts page, in the right panel's
Artifacts tab and in the task thread
> - The artifact directions lab (#17213) settled a presentation for
those surfaces, MVP V1, drawn from the PCLP-Core mocks. It is a
reference, not product code
> - Shipping it means product components on product data, token-only,
behind a switch, one surface at a time, so the current presentation
stays the default until the new one has been used
> - This pull request adds the switch (Settings > Experimental >
Artifacts V1), the `--artifact-*` tokens, the V1 primitives as product
components, and the V1 presentation on all three surfaces behind the
switch: the Artifacts page, the panel's Artifacts tab and the task
thread
> - The benefit is the redesign in the product, reversible by one
setting, with every existing behaviour of those surfaces kept

## Linked Issues or Issue Description

No public issue exists. This section follows the feature request
template; the plan is `doc/plans/2026-10-22-artifacts-mvp-v1.md`.

**Subsystem affected**

The web UI (`ui/`): the Artifacts page, the right panel's Artifacts tab
and the task thread. The experimental settings contract in
`packages/shared` and `server` gains one boolean.

**Problem or motivation**

The three artifact surfaces grew separately and their artifact
presentation is dated and inconsistent. The lab produced a measured
direction; nothing in the product uses it yet.

**Proposed solution**

An experimental setting, `enableArtifactsV1`, default off, with the same
plumbing as the other experimental settings. Product primitives under
`ui/src/components/artifacts/v1` (kind helpers and adapters, the sheet
and print artwork, the stack, the page tiles with the Paper Mono pill,
the row the panel and thread will share), driven by `--artifact-*`
tokens in `index.css` with light and dark values. With the setting on:
the Artifacts page shows one row of views (Tasks, All files, Images,
Videos, Documents, Text, Files) and the V1 tiles, a task with several
artifacts as a stack whose newest artifact is the first page, everything
else as single tiles; the panel's Artifacts tab is one flat list of V1
rows, newest first, with the expandable rows (Markdown review surface,
document annotations, deep links) keeping their behaviour behind the row
as their face; the thread shows a message's files as rows under its
footer and registered deliverables and documents as one row each. The
hover movement respects reduced motion.

**Alternatives considered**

Replacing the current cards outright: no fallback and three surfaces to
land at once. Mounting the lab's components: they are typed on lab
fixtures and keep lab-local tokens, which the token gates reject. The
primitives were ported instead and the lab stays a reference.

**Roadmap alignment**

Supports the "Artifacts & Work Products" theme in `ROADMAP.md`.
Presentation only; no data model change.

**Additional context**

No new API fields: the tiles show title, identifier, count and "Updated
…"; rows take sizes from the work-product and attachment payloads; a
picture's aspect ratio comes from the loaded image, 4:3 until it loads.
The plan records what each surface keeps and what it drops (run sections
in the panel; the "Images · N / Files · N" labels and the four-up grid
in the thread).

## What Changed

- Add the `enableArtifactsV1` experimental setting: shared type,
validator and feature catalog, server defaults and managed keys, the
`useArtifactsV1Enabled` hook, and the Settings > Experimental toggle (in
its alphabetical place).
- Add the `--artifact-*` tokens and the Artifacts V1 component rules to
`ui/src/index.css`: light values on `:root`, dark overrides, and the
hover movement under `prefers-reduced-motion: no-preference`.
- Add `ui/src/components/artifacts/v1/`: `kinds.ts` (kind treatment,
labels, glyphs, the server's media-kind rule, adapters from
`CompanyArtifact`), `geometry.ts` (the measured constants), `when.ts`,
`ArtifactSheet`, `ArtifactPrint`, `ArtifactStack`, `ArtifactFront`,
`ArtifactTile` (stack and single tiles, caption, grid), `ArtifactRow`
(the row and its inline group), `ArtifactsV1Filters`, with the mock's
SVG assets.
- Wire the Artifacts page: with the setting on, the toolbar's filter row
becomes the V1 views and the grid renders V1 tiles; the toolbar takes an
optional `filters` row for this. The old cards and kind filters stay the
default.
- Wire the panel's Artifacts tab (`IssuePropertiesArtifactsTab`): with
the setting on, one flat list of V1 rows, newest first; `DocumentRow`
and `MarkdownWorkProductRow` take a `face` render prop so the V1 row
fronts their unchanged expansion, review and deep-link behaviour;
`PanelFileRow` opens attachments and attachment-backed work products the
way the shipped card does (gallery, text tab, new tab) with open and
download beside the name; other work products are a link row with their
status.
- Wire the task thread: `TaskChatBubble` hangs a message's files under
its footer as V1 rows inline (pictures and video to the gallery, text to
a text tab, files to a new tab) in place of the media grid and file
chips; `TaskChatProtocolCard`'s resource rows render deliverables,
documents and attachments as one V1 row each, opening where the card
did.
- `ArtifactRow` keeps trailing controls beside its own control (no
nested interactive elements) and can be a link, an in-app anchor, a
new-tab anchor or a button; adapters read work products, documents,
attachments and message references.
- Add a catalogued Storybook story, `Components/Artifact V1 primitives`,
under `documents-artifacts`, on fixtures.
- Add tests: the primitives (kinds, dates, print fitting, tiles, rows),
the hook, the Artifacts page, the panel's Artifacts tab, the task-chat
bubble and the protocol card, each with the setting on and off; the
settings page and server tests list the new key.
- Add `doc/plans/2026-10-22-artifacts-mvp-v1.md`.

## Verification

- Run `cd ui && pnpm typecheck`: the Storybook catalog accepts the new
story, and `tsc -b` is clean apart from the five pre-existing
`PluginOrganizationSwitcher` errors.
- Run `pnpm check:token-gates` and `node scripts/check-maps.mjs`: clean.
- Run `cd ui && npx vitest run src/components/artifacts
src/components/issue-properties
src/components/task-chat/TaskChatBubble.test.tsx
src/components/task-chat/TaskChatBubble.artifactsV1.test.tsx
src/components/task-chat/TaskChatProtocolCard.test.tsx
src/components/task-chat/TaskChatProtocolCard.artifactsV1.test.tsx
src/pages/Artifacts.test.tsx src/hooks/useArtifactsV1Enabled.test.ts
src/pages/InstanceExperimentalSettings.test.tsx`: the suites pass (151
tests in the last run).
- Run `cd packages/shared && npx vitest run src/feature-catalog.test.ts`
and `cd server && npx vitest run
src/__tests__/instance-settings-service.test.ts`: pass.
- Manual: open Settings > Experimental, turn on Artifacts V1. On the
Artifacts page the view row reads Tasks, All files, Images, Videos,
Documents, Text, Files; tasks with several artifacts show as stacks,
hovering fans the pages and lifts the artwork (not under reduced
motion); Images shows single tiles with bordered prints. Open a task's
Artifacts tab: one list of rows, newest first; a Markdown work product
still expands into its review surface, a document still opens in its
tab. In the thread, a message's files sit under its footer as rows. Turn
the setting off: everything returns to the current presentation.
- Storybook: `Tasks and conversations / Documents, attachments, and work
products / Components / Artifact V1 primitives`.
- Not run: the full `pnpm test:run` and `pnpm build` (CI runs them), and
a browser pass against a dev instance with real artifacts on the three
surfaces; that pass is the remaining step before this leaves draft.

## Risks

- Off by default; with the setting off, the only changes on a product
path are an optional `filters` prop on the toolbar, an optional `face`
prop on two panel rows, a read of the setting in the bubble and the
protocol card, and the new token declarations.
- With the setting on, the Artifacts page's view tabs set two URL
parameters (`groupBy`, `kind`) at once; the group-by menu and search are
unchanged.
- A picture with unknown dimensions renders at 4:3 until it loads, then
the print refits once; the frame's height is fixed so nothing below it
moves.
- About thirty new `--artifact-*` tokens, namespaced and documented in
place.

## Model Used

- Claude Fable 5.1 by Anthropic, model ID `claude-fable-5-1`, used
through Claude Code in the desktop app. Extended reasoning was on.
Capabilities used: tool use (shell, file edits, a headless Playwright
browser for the lab's measurements, the Figma MCP server for the mocks
during the lab work) and image input. The context window is the Claude
Code session's; its exact size is not surfaced to the session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above (#17213 is the lab this builds on)
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass (the suites listed above;
CI runs the full set)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes (the
plan document; no command or product behaviour changes outside the
setting)
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Fable 5.1 <noreply@anthropic.com>
2026-10-22 15:14:58 -07:00
Devin Foley 059ae49cab feat(connections): add Unikraft Cloud connection (#17139)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Apps connections give agents governed access to external services
through vault credentials, grants, action policies, the tool gateway,
and audit.
> - Unikraft Cloud runs unikernel micro-VMs, services, and volumes
across regional metros, and it offers a sandbox plugin for commands and
files.
> - Unikraft is not in the catalog. It has no hosted MCP server, so the
generic "Connect your own MCP server" flow cannot reach it.
> - Daytona (#16483) added a native REST pattern for this case: a
catalog generated from the provider's published OpenAPI specifications
and executed through the gateway.
> - This pull request adds Unikraft on that pattern and moves the shared
native-provider code into one registry, so the shared connection code
does not name each provider.
> - The benefit is governed agent access to all published Unikraft
actions, with the token kept in the vault and sent only to published
Unikraft hosts.

## Linked Issues or Issue Description

Refs #16483

**Problem or motivation**

Teams that run workloads on Unikraft Cloud want their agents to list
instances, read logs, deploy and scale services, and run commands in
sandboxes. Unikraft is not in the Apps catalog. Unikraft has no hosted
MCP server, so operators cannot connect it through the remote MCP flow.

**Proposed solution**

Add a native Unikraft connection. Generate its actions from Unikraft's
official OpenAPI specifications for the platform API and the sandbox
plugin. Pin the specifications to a reviewed commit. The operator
connects an API token. The token stays in the vault and goes only to the
five published metro hosts. Every action takes an optional metro.
Actions without a metro use the connection's default metro, which the
operator can change under Advanced.

**Alternatives considered**

A catalog-only AppDefinition was not possible because no hosted MCP
endpoint exists. Wrapping the `unikraft` CLI was rejected because it
would expose host filesystem behavior and CLI login state. A second copy
of the Daytona bridge was rejected; the shared transport and catalog
contract are now one module with a provider registry.

**Roadmap alignment**

This extends the existing Apps and Connections provider coverage. It
uses the existing credential, grant, policy, gateway, and audit model.
It does not overlap planned core work.

## What Changed

- Added `scripts/generate-unikraft-tools.mjs` and its tests. The
generator reads the platform and sandbox plugin specifications at commit
`5dd107ea1cd8716b83cb86a83ed2a6ee46f99b5b`, resolves shared parameters,
records source SHA-256 hashes, and writes
`server/src/services/unikraft/operations.generated.json`.
- The catalog has 105 actions: 89 platform operations and 16 sandbox
plugin operations. The server-sent audit event stream is recorded in the
inventory and is not advertised as an action.
- Classification: GET operations and sandbox reads and waits are reads.
Delete, stop, suspend, detach, unpin, and sandbox command execution,
signals, and stdin are destructive. All other operations are writes.
- Added `server/src/services/connectors/unikraft/client.ts` and its
generated catalog. It validates arguments against the generated schemas,
accepts only published metros, rejects path traversal, sends JSON bodies
on GET and DELETE as the specification requires, and verifies the token
with `GET /v1/users/quotas`. A sandbox wait that times out (documented
HTTP 408) returns a still-running result instead of a failure.
- Moved the bounded, credential-redacting HTTP sender and the catalog
contract helpers from `daytona.ts` to `native-rest-client.ts`. Added
`native-provider-catalogs.ts`. `tool-access.ts`, the
`tool-access/catalog` and `token-broker` modules,
`connectors/tool-policy.ts`, and `tool-gateway.ts` now use this registry
instead of Daytona-specific checks. Daytona behavior does not change.
- Added the Unikraft definition source, the generated definition, the
brand mark and manifest entry, and the permission review (`liveProof:
not-run`).
- Added `doc/connections/UNIKRAFT.md` with a sequence diagram,
endpoints, setup, actions, and limits. Updated the connections README,
the permission audit, and both capability maps.
- Tests: definition shape, database-backed gateway reads, writes,
deletes, and sandbox commands for personal and shared grants, default
and per-call metros, rejection of unpublished metros and traversal, Off
policies, revocation, stale-contract blocking, credential export denial,
schema validation for all actions, pinned-transport tests for GET and
DELETE bodies, and a browser setup check.

## Verification

- `pnpm exec vitest run packages/shared/src
server/src/__tests__/unikraft-connection.test.ts
server/src/__tests__/unikraft-http-boundary.test.ts
server/src/__tests__/daytona-connection.test.ts
server/src/__tests__/daytona-http-boundary.test.ts
server/src/__tests__/tool-access-service.test.ts
server/src/__tests__/tool-gateway-service.test.ts
server/src/__tests__/tool-gateway.test.ts
ui/src/pages/apps/AppsConnect.test.tsx ui/src/pages/apps/Browse.test.tsx
ui/src/lib/app-brand-assets.test.ts` plus `connector-tool-policy` and
`tool-catalog-publication`: all passed after the rebase onto the split
tool-access modules.
- `node --test scripts/generate-unikraft-tools.test.mjs
scripts/generate-daytona-tools.test.mjs
scripts/app-brand-validation.test.mjs`: 20 passed.
- `node scripts/check-app-brand-assets.mjs`, `node
scripts/check-maps.mjs`, and `git diff --check`: passed.
- `pnpm --filter @paperclipai/shared typecheck`, `pnpm --filter
@paperclipai/server typecheck`, and `pnpm --filter @paperclipai/ui
typecheck`: clean.
- `npx playwright test --config tests/e2e/playwright.config.ts
tests/e2e/unikraft-connector.spec.ts
tests/e2e/daytona-connector.spec.ts`: 2 passed.
- `node scripts/generate-unikraft-tools.mjs` regenerates the committed
catalog with the recorded hashes.
- Manual: on a local instance, open Connectors, search for Unikraft, and
select **Add key**. Confirm the icon, the password field, the key
guidance, and the default metro select under **Change**.
- Not verified: a real Unikraft account. Live provider read and write
proof is pending.

## Risks

- A Unikraft token acts for the whole organization in every metro.
Unikraft offers no narrower token permissions. Assign only trusted
agents and review action permissions.
- Sandbox actions run arbitrary commands inside the selected instance.
They are classified as destructive.
- A timed-out write can still complete at the provider. The bridge does
not retry writes automatically.
- New metros fail closed until the specification is regenerated and
reviewed. Legacy `*.kraft.cloud` hosts are not reachable.
- The Daytona refactor moves code without behavior changes. All Daytona
tests pass without edits.
- The generated JSON snapshot is large because it holds the provider
input contracts. No migration or lockfile change is required.

## Model Used

- Claude Opus 5.5 (Anthropic), model ID `claude-opus-5-5`, 1M context
window, used through Claude Code with tool use (shell, file editing, web
research, browser tests).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge
2026-10-22 15:14:26 -07:00
Nicky LeachandPaperclip 0081863463 Fix isolated ACPX admission for assigned PRP tools (#17149)
## Thinking Path

- Paperclip uses Runner to execute agent tasks under Core's selected
policy.
- The ACPX sidecar can receive assigned MCP tools in its PRP catalog.
- Isolated admission still requires a separate native MCP endpoint for
those assignments.
- This check rejects a valid PRP route before the provider can start.
- This PR identifies the sidecar's PRP transport at the runtime-host
boundary.
- The benefit is that assigned tools work with the existing isolated
permission policy.

## Linked Issues or Issue Description

**What happened?**

An isolated Claude task with an assigned MCP binding fails with
`assigned native MCP launch binding is unavailable` when Core delivers
its tools through PRP.

**Expected behavior**

The sidecar must accept its authenticated PRP tool bridge as the
assigned-tool route. Callers that use the native gateway must still
supply its complete binding.

**Steps to reproduce**

1. Open an isolated Claude sidecar session with `deny-all` permissions
and a read-only policy.
2. Supply an assigned MCP binding in the runtime context and its tools
in the PRP catalog.
3. Omit native gateway environment variables. Admission fails before
provider startup.

**Paperclip version or commit**

Reproduced against `92cfd701c39bb1ea394a796023481a21decb2532`.

**Deployment mode**

Runner with an ACPX sidecar and controller-owned tool delivery. Related
contract work: #16978. The search found no existing PR or issue for this
failure.

## What Changed

- Let runtime-host callers select PRP delivery when they supply the
semantic tool bridge.
- Select that route in the sidecar. Keep native gateway validation and
direct callers' default behavior.
- Preserve exact controller operation names in PRP mode, including the
compact assigned-MCP catalog. Keep existing aliases for other bridge
callers.
- Preserve the selected permission and read-only policies.
- Add one process-level sidecar regression and one host admission
regression. The host test calls the real authenticated MCP bridge.
- Document the route and refresh the generated Copilot source hashes.
The provider and profile versions stay the same.

## Verification

- Passed 11 focused tests after the rebase across the runtime host,
sidecar, tool bridge, and Copilot identity tests. They cover both
compact catalog operations, restricted and approve-all policies, legacy
aliases, missing and invalid gateway bindings, and the existing direct
gateway path.
- The process-level test crosses the real sidecar dispatcher and stops
at workspace validation before provider startup. The host test uses real
ownership sockets and MCP HTTP, with a fake provider port.
- The generated identity tests match the current source hashes. The
historical fixture stays unchanged.
- The standard review passed on the rebased commit. [Apex passed the
required 5/5
threshold](https://github.com/paperclipai/paperclip/runs/119513362214)
on `e63a223`, with 11 files reviewed and no findings.
- Rebased onto master `734c265`. The conflicts affected generated source
identities and their test expectations. All reviewed behavior files
remain byte-for-byte unchanged. The user authorized retaining the Apex
result for this rebase. [CI passed on
`3facef5`](https://github.com/paperclipai/paperclip/actions/runs/39685163239).
The final PR checks contain 56 passes and four expected skips. The
branch is current with master, has no conflicts, and has no unresolved
review comments.
- `node packages/paperclip-runner/scripts/copilot-profile-identity.mjs
--check` passed.
- Initial local runs exposed missing test dependencies and sandbox
denial of loopback sockets. After the scoped dependency install and
socket permission, the selected tests passed.
- Broad typecheck, build, and test verification runs in GitHub CI, as
requested. No live provider or model request was made.

## Risks

- PRP callers must supply the assigned tools in the controller-owned
catalog. The existing bridge still enforces its closed catalog and
authentication.
- An explicit PRP selection without a semantic bridge still fails.
Invalid native gateway bindings still fail.
- No database, protocol-frame, provider-version, or credential-storage
change is required.

## Model Used

OpenAI GPT-6 through Codex, with source inspection, editing, and command
execution. The exact served model ID and context-window size are not
exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-21 16:00:14 -07:00
DottaandPaperclip 734c265339 Default new Pi agents to Paperclip Runner (#17142)
## Thinking Path

> - Paperclip manages AI agents and their work.
> - Users choose a harness during agent setup.
> - Claude, Codex, and OpenCode already receive their qualified Runner
default.
> - Pi has a qualified native integration but new Pi agents still use
the direct adapter.
> - This change gives new Pi agents the native default on supported
targets.
> - Saved agents keep their runner and compatible settings. Legacy
remains available in Advanced.

## Linked Issues or Issue Description

Refs #17120, #14921, #14922, #14923, #14924, and #14956. Related generic
default work: #15422. This PR is the separate Pi follow-up to the merged
OpenCode change.

**Current behavior**

Choosing Pi for a new agent saves the direct Pi adapter. The native Pi
integration remains behind the generic experimental flag.

**Proposed behavior**

Default new Pi agents to ACPX Pi on macOS ARM64/x64 and GNU/Linux x64
with supported glibc. Keep unsupported targets and explicit Legacy
selections on the direct adapter. Require an explicit provider/model
before test or hire. Permit model-free inactive setup drafts.

**Reason and benefit**

Users choose Pi once and receive its qualified runner. Saved agents
retain their identity and settings. Conversions reject unsupported
legacy thinking and launch settings instead of dropping them.

## What Changed

- Add Pi to the shared platform/default contract and server creation
selection.
- Admit native Pi without the generic experimental flag.
- Preserve provider models, credentials, workspace settings, exact
thinking, and saved native policies.
- Add Pi runner controls, branding, setup resume, onboarding, built-in
configuration, and import handling.
- Add managed Pi OpenRouter routing and matching native provider API-key
accounts. Keep subscription and custom gateway exclusions. Clear
alternate credentials and reject custom Pi provider overrides.
- Keep Pi draft models empty instead of applying Claude's default model.
- Verify setup against the pinned Pi runtime. For native Pi on the
official OpenRouter route, reverify the API key live without requiring a
global Legacy Pi CLI.
- Match Pi’s bounded controller close window to its native snapshot
cleanup and lifetime verification, preserving explicit caller deadlines
and the mandatory drain/suspension proof.
- Bind Pi sidecars to the package that owns the pinned native assets,
including source and vendored server layouts. Other providers retain
their existing package authority.
- Keep protocol-owned finish/block tools out of the ACPX forwarded
catalog. The trusted bridge installs these tools itself; the complete
Rust authorization catalog and terminal receipt ledger remain intact.
This fixes actual Pi session startup and applies to other ACPX
consumers.
- Advance Copilot’s shared-source attestation to v58 because it pins the
shared files touched by Pi. Preserve immutable v57 bytes and historical
decoding; Pi’s own release identity is unchanged.
- Add regression coverage and update the paired maps and developer
documentation.

## Verification

- Passed: full repository typecheck and full production build on final
head 656d304783, including the generated attestation repair.
- Passed: focused shared/server/UI suites covering default selection,
platform fallback, conversion preservation, inactive drafts, managed
account compatibility, credential isolation, OpenRouter routing/model
IDs, exact thinking controls, and saved-account selection. Relevant
batches include 375 server/conversion tests, 267 account/routing tests,
and 110 UI setup/account tests.
- Passed: 179 attestation, historical-profile, qualified-profile, and
native-execution contract tests after CI identified stale Copilot source
hashes. The identity generator check passes; the only delta after the
passing Pi browser run is this Copilot attestation/history repair.
- Passed: 145 managed-account tests, including actual service
preparation and API-key adoption/rejection for native Pi without the
Legacy CLI; 6 pinned-installation probe tests.
- Red then green: an actual task failed session.open because its
54-operation catalog included the bridge-owned terminal tools. The
regression with those tools failed before the filter; all 399 Rust
library tests pass after it. The full product retry exposed an
additional package-authority mismatch. Four authority tests failed
before that repair; 11 authority checks and 14 installation/asset checks
pass afterward. Direct real Pi session initialization with the corrected
package root and catalog succeeds. No model prompt was sent by that
diagnostic.
- Red then green: real Pi posted Hello from Pi but its controller closed
before native cleanup could finish. The cleanup-budget test failed with
the old default and passes with the bounded Pi window. All 46 selected
suspension, drain, and package-authority tests pass after building their
native fixture.
- Passed: token gates, paired map checks, Rust formatting, and git diff
--check.
- Passed real browser acceptance on macOS ARM64, generic native runner
flag disabled, source a433748a12 (Pi code unchanged afterward): the UI
selects Paperclip Runner by default, retains Pi and the selected
model/account, and verifies the pinned runtime plus live OpenRouter key.
A fresh UI-created task, assigned to the UI-created native Pi agent,
posted exactly `Hello from Pi` and reached Done without retry or
restart. The native run and workspace finalization succeeded; the
response and Done persisted after Reload.
- Evidence: 8 preserved browser attempts, including the final passing
18-step journey with all screenshots. Prior failures remain recorded.
The earlier failed checkpoint run recovered on server restart; that
recovery is separate from the fresh final task’s clean success.
- Preserved browser failures: missing account control/inherited Claude
draft model; incompatible managed-account/model-prefix handling; generic
npm probe for Pi; Legacy CLI hello check; duplicate terminal tools and
wrong provider-package authority at actual native session.open; a real
Hello from Pi comment followed by premature checkpoint cleanup timeout.
Each failure has retained screenshots/logs and a corresponding focused
repair. The fresh final task proves these repairs end to end.
- The exact Runner Vitest shard was also run locally after the
attestation fix: the stale-hash failure is gone; 1,833 tests passed, 10
skipped, and two Codex retained-control settlement scenarios failed with
`native_cleanup_maintenance_unproven` during terminal ACK/suspension
replay. Both scenarios passed in an isolated rerun (2/2), and the same
19-test file passed in the preceding Linux CI run. The precise
full-shard timing cause is not established. These Codex scenarios are
outside the changed Pi paths; the original local failures are retained;
no complete local Runner-shard pass is claimed. The corresponding Runner
shard now passes on the final head in hosted Linux CI. All 60 final-head
check runs are now terminal and clean (55 successful, 1 neutral, 4
skipped), and the legacy Snyk status is successful.
- Local full repository tests were attempted but not completed:
provisioning briefly confused a workspace symlink, then a later run was
stopped before browser-driven repairs. No full local-suite pass is
claimed. Final-head hosted CI is green and fresh Greptile review is 5/5
with all review threads resolved; earlier jobs canceled by runner
shutdown are not counted as a pass.

## Risks

- Pi cleanup has a finite 45-second default window, accounting for the
native 30-second snapshot cleanup and 5-second lifetime fence. Other
providers and explicit caller deadlines retain their prior behavior.
- Pi requires explicit operator setup with `paperclipai runtime setup
pi` on the execution host. This PR does not add automatic downloads.
- Linux ARM64, Windows, musl, and unqualified targets retain Legacy.
- Legacy thinking levels minimal, medium, and xhigh cannot be translated
exactly. Native max thinking, warm lifecycle, or restricted permissions
cannot be dropped during a return to Legacy.
- Copilot’s bound profile advances to v58 with exact current launch
admission; v57 remains decodable for recovery. No historical identity is
rewritten.
- Existing agents and immutable run descriptors are not migrated. Cloud
Pi availability is unchanged.

## Model Used

OpenAI GPT-6 through Codex with reasoning, code editing, command
execution, and browser use. The exact serving model ID and
context-window size are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-21 17:10:00 -05:00
DottaandPaperclip 92cfd701c3 feat: add governed Braintrust app connections (#17141)
Add hosted US and EU Braintrust OAuth and API-key connections through the existing governed MCP system.

Keep reviewed tool risks and catalog review policy in connector modules and a narrow registry. Preserve credential ownership, operator decisions, regional setup and changed-tool quarantine. Include official artwork, setup guidance, focused regressions and sanitized qualification evidence.

US OAuth has bounded live read/write, gateway, reconnect and cleanup proof. Remaining account-method and token-lifecycle qualification gaps are documented.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-21 16:19:58 -05:00
DottaandPaperclip 39e44a9d9b Default new OpenCode agents to Paperclip Runner (#17120)
Default new OpenCode agents to Paperclip Runner on qualified macOS and Linux x64 targets. Preserve saved runner choices, explicit Legacy selection, and unsupported-target fallback. Pi remains a separate change.

Verified the complete browser path with a real OpenRouter connection: create the new agent, assign a task, observe its response and Done status, and reload to confirm persistence. CI passes and Greptile is 5/5 with no unresolved findings.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-21 15:09:15 -05:00
DottaandPaperclip 0a5f1546ee feat(cases): add reusable prompt workflows (#17114)
## Thinking Path

> - Paperclip manages AI agents and their work.
> - Cases keep facts, documents, and one primary task across agent
handoffs.
> - Each case currently needs its own procedure text.
> - Agents need to reuse procedures and move cases between them without
replacing the task.
> - This change adds company workflow definitions with a name and
Markdown prompt.
> - Existing handoff and document transactions preserve authority,
revisions, and recovery.
> - Cases remain behind `experimental.enableCases`.

## Linked Issues or Issue Description

Refs #16959. Related proposal: #3951 uses task graphs and a visual
editor. This change extends existing Cases with prompt definitions and
keeps its current handoff model.

**Problem or motivation**

Agents cannot share a reusable procedure across cases or inspect a
case's movement between procedures.

**Proposed solution**

Add name-and-prompt workflow definitions. Adopt a prompt into the
primary task's revisioned workflow document through a handoff. Keep
phases as free text.

**Alternatives considered**

Defer graphs, workflow versions, run entities, role schemas, authoring
screens, and Spec Kit integration.

**Roadmap alignment**

This extends the existing Cases experiment and same-task review flow. It
adds no work queue or new execution engine. The maintainer approved this
scope in the implementation plan.

## What Changed

- Add company-scoped definition storage, shared request schemas, REST
routes, and four optional Cases tools.
- Accept a workflow ID at kickoff. Agent handoffs can adopt, refresh,
preserve, or detach a workflow.
- Capture prompt text and the document base revision at acceptance.
Apply workflow, phase, and document revision together after outgoing
execution settles.
- Hold conflicting document edits for recovery. Preserve cancellation,
replay, and restart behavior.
- Show current workflow names and captured transition names/phases in
Work, history, and Audit.
- Update instructions, API/tool contracts, capability maps, and the
isolated workflow journey.
- Pin bounded workflow prompt reads to a content fingerprint;
continuation conflicts on edits and can restart safely.
- Remove experimental Cases/workflow/Mermaid guidance from the always-on
native prompt. Extract runtime-context prompt strings into a
CODEOWNERS-protected constants file while preserving the public imports.
- Refresh Copilot’s pinned source identity to v57, including the
extracted prompt file and retaining historical identities.

## Verification

Local checks: repository `pnpm -r typecheck` and `pnpm build` pass on
the prompt-extraction tree (`88222d45d8`). Full repository coverage
previously completed through the supported isolated shard groups (1,082
general server suites, 161 serialized suites, and all three workspace
groups). The earlier default serial run was interrupted and remains
incomplete. The first sharded run retained the failures described below;
targeted corrections and separate limited-concurrency reruns pass. All
CI jobs, security checks, and the 5/5 Greptile review passed on
`fc1bd79c28`. Fresh CI and review are pending for the prompt extraction
in `88222d45d8`. Focused verification passes: real-database handoff
recovery and reuse; 2,002 native-tool/API contract checks; 144 Runner
catalog/discovery checks; 27 Runner context/coverage checks; 37
case/Audit UI checks; and Product E2E oracle calibration. Token gates,
migration safety/numbering, module boundaries, capability maps, and
generated tool/Storybook catalogs pass. The final route/context
corrections pass 49 API/native-tool tests, 90 real-database handoff
tests, and server typecheck; 142 Copilot installation/sidecar tests pass
with the refreshed identity.

Greptile’s first review found that successive prompt pages could mix
definitions after an edit. The fix returns a content fingerprint,
requires it for continuation, and rejects edits with 409. Strict
live/catalog schemas pass (171 Runner checks). The 2,005 API/OpenAPI
tests pass; the initial native regression caught compression’s weak ETag
prefix, and all 23 native integration tests pass after handling it. The
regression covers same-length edits and a four-byte restart window. No
stored version fields or entities were added.

The prompt extraction passes all 462 checks across six focused suites,
including persisted-context recovery and provider transport. The first
local transport attempt lacked the required debug Runner binaries (102
failures, retained); after building the normal prerequisites, all 283
tests in that suite pass without source or assertion changes. Existing
saved snapshots retain their recorded prompt text, and new executions
use core-only prompt v7. The extracted prompt source is now covered by
both CODEOWNERS and Copilot’s source fingerprint.

Live-provider evidence is separate from those simulated checks: the
isolated API-key campaign `reusable-workflows-api-final-2026-10-21`
passed with local code matching `a1d73b4652`. Four actual Codex API runs
read the adopted task documents, moved one case A → B → A on the same
task, completed normally, and passed all nine durable checks. Browser
assertions verified the current workflow/phase, historical names/phases,
five handoff records including terminal completion, and the completed
original task. Cleanup passed. The local report remains under
`tests/runner-e2e/results/reusable-workflows-api-final-2026-10-21/`; no
credentials or screenshots are committed.

CI initially caught an omitted route-inventory entry and a stale pinned
instruction-source hash; both are corrected and separately verified.
Local serialized coverage also recorded an unrelated environment-route
socket disconnect and activity-route timeout; their separate 11-test and
17-test suites passed without code or timeout changes. An unchanged
chunked-webhook check also passed its separate four-test rerun. The
initial adapter/database workspace groups hit time and resource limits
under default worker counts; complete reruns with `VITEST_MAX_WORKERS=2`
pass, including all 55 database files and 211 tests. The UI/CLI groups
passed 837 files and 9,442 tests in the original run. Original failures
remain retained and are not regraded.

Earlier failed live campaigns remain unchanged: subscription HTTP 429
before agent execution; an obsolete exact-four-row oracle that rejected
the valid terminal fifth row; and a chat-marker expectation that did not
account for the existing explicit-comment presentation policy. The final
fixture requires terminal completion and places the marker in its
authoritative comment. Positive/negative oracle tests and the fresh live
campaign pass.

## Risks

- The additive migration adds a table and nullable case/handoff fields.
Existing rows keep null workflow metadata; no assignments are inferred.
- Adoption can wait on an intervening task-document edit. Recovery must
cancel the old intent and accept a new one after readback.
- Shared definition edits affect future adoptions. Existing case copies
keep their revisions.
- The feature remains experimental. This PR does not merge or deploy the
change.
- Live acceptance covers native Codex before the prompt extraction; this
cleanup has contract/transport verification rather than a new
live-provider campaign. The refreshed Copilot identity has static
compatibility evidence, not new live-provider qualification.

## Model Used

OpenAI Codex, configured model ID `gpt-6-astra`, xhigh reasoning. Used
terminal execution, file editing, and tool calls. The active
context-window size is not exposed.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-21 15:00:12 -05:00
Devin Foley a1e2173ceb feat(apps): add Ditto connection (#16472)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Agents reach external services through the Apps catalog. Each
catalog entry is a reviewed `AppDefinition` that connects a provider's
hosted MCP server to Paperclip's shared vault, grants, policies,
gateway, and audit trail.
> - Ditto (`dittowords.com`) is a single source of truth for product
copy. Its hosted MCP server lets agents read style guide rules, search
and reuse approved text, and create, edit, translate and delete text,
components, variants and style guides.
> - Ditto is not in the catalog. Operators must use the generic "Connect
your own MCP server" flow. That flow has no branding, no guidance about
Ditto's `token` API-key scheme, and no warning about permanent deletes.
> - The generic risk classifier also reads several Ditto mutations as
reads: `translate_*` replaces variant text, and `link_*` and `unlink_*`
replace developer IDs.
> - This pull request adds the Ditto definition, its artwork, the
research and permission-review ledger rows, documentation, deterministic
tests, and one reviewed risk-classification rule.
> - The benefit is a branded, governed Ditto connection with browser
sign-in, an API-key option that uses the correct header, and correct
risk levels for every documented tool.

## Linked Issues or Issue Description

**Problem or motivation**

Product and engineering teams use Ditto to keep UI copy consistent. They
want their Paperclip agents to follow the Ditto style guide and reuse
approved strings when they write code. Ditto is not in the Apps catalog.
Operators must paste the MCP URL into the generic remote-MCP flow. That
flow gives no branding and no method guidance. It also does not tell the
operator that Ditto API keys use `Authorization: token <key>`, not
`Bearer`, and it does not warn that delete tools are permanent. The
generic classifier also marks five Ditto mutations as reads, so the
Permissions screen shows them with the wrong risk level.

**Proposed solution**

Add a catalog-only Ditto connection built from the connector playbook.
Browser sign-in uses dynamic client registration on Ditto's Auth0
authorization server and requests the reviewed scopes `openid`,
`profile`, `email` and `offline_access`. An optional method sends a
customer-created workspace API key with the `token` scheme. Both methods
share one `write` capability profile, so the delete and link warning
shows before sign-in. Add a reviewed `ditto` rule to `classifyRisk`:
`list_*`, `get_*` and `search_*` tools, `suggest_edit`, and tools that
Ditto marks read-only are reads; `delete_*` tools are destructive; all
other tools are writes.

**Alternatives considered**

A plugin was not needed because no custom UI, tables, workers, or
webhooks are involved. Requesting no scopes was not chosen, because
Auth0 issues a refresh token only for `offline_access`, so the
connection would expire with its first access token. Ditto's separate
documentation MCP server (`developer.dittowords.com/mcp`) was not added,
because it only searches Ditto's public docs.

**Roadmap alignment**

This extends the existing self-serve remote-MCP connection catalog and
does not overlap planned core work.

## What Changed

- Added the `ditto` provider to `scripts/ingest-app-definitions.mjs`
(category `content`, `token` API-key placement, guidance, warnings,
shared capability profile, description) and regenerated
`packages/shared/src/app-definitions/ditto.json` and the generated
registry.
- Added the Ditto row to the self-serve MCP research ledger with
`dcr_or_api_key` auth and risk tier S4, because the normal tool catalog
includes permanent deletes. Widened `SelfServeMcpResearchEntry.wave` to
include `4`, which existing entries already use.
- Added permission reviews for `ditto/mcp-oauth` (explicit scopes
`openid`, `profile`, `email`, `offline_access`) and `ditto/mcp-api-key`
(provider key), with evidence links.
- Added a reviewed `ditto` rule to `classifyRisk` in
`server/src/services/tool-access.ts`.
- Added Ditto's mark (`ui/public/brands/apps/ditto.png`, the avatar of
Ditto's official GitHub organization) and the brand manifest entry.
- Added gallery copy for the Ditto card.
- Added `doc/connections/DITTO.md` (sign-in sequence diagram, provider
and Paperclip endpoints including `/api/tools/oauth/callback`, scopes,
administrator setup, capabilities and policy, manifest, brand
provenance, validation hook) and linked it from the connections README
and the permission audit.
- Tests: Ditto definition shape, store visibility and artwork, URL
recognition, reviewed scopes, `token` header projection with the key
kept out of connection config, risk classification of every read-looking
Ditto mutation, the connect form's sign-in default, the warning before
sign-in, API-key gating, and the pinned catalog counts.

## Verification

- `pnpm exec vitest run packages/shared/src/app-definitions.test.ts
packages/shared/src/app-definitions-url.test.ts
ui/src/pages/apps/AppsConnect.test.tsx ui/src/pages/apps/Browse.test.tsx
ui/src/lib/app-brand-assets.test.ts
ui/src/pages/apps/AppLogo.brand-assets.test.tsx
server/src/__tests__/tool-access-service.test.ts` — 765 passed.
- `node scripts/check-app-brand-assets.mjs` and `node --test
scripts/app-brand-validation.test.mjs` — passed.
- `pnpm --filter @paperclipai/shared typecheck`, `pnpm --filter
@paperclipai/server typecheck`, `pnpm --filter @paperclipai/ui
typecheck` — clean.
- Manual: on a local instance, open Apps → Browse and confirm the Ditto
card and icon. Open `/apps/connect?source=ditto` and confirm that
sign-in is the default, that the warning shows before sign-in, and that
the API-key method is under Advanced.
- Live metadata probe: an unauthenticated `initialize` on
`https://api.dittowords.com/v2/mcp` returns 401 with
`resource_metadata`. The protected-resource and authorization-server
documents return the recorded endpoints. Dynamic client registration
succeeds, and the authorize endpoint redirects to Ditto's sign-in page
with the reviewed scopes and the `resource` parameter.
- Each of the 41 documented tool names was run through `classifyRisk`
with and without the new rule. Without the rule, `translate_text_items`,
`translate_library_components`, `link_figma_nodes_to_text_item`,
`link_text_items_to_component` and `unlink_text_items_from_component`
were reads.

## Risks

- Low risk to existing providers: the catalog change is additive, and
the new `classifyRisk` branch runs only for the `ditto` source template.
- Ditto delete tools are permanent, and linking a text item to a
component replaces its developer ID. Both methods warn the operator
before connecting, and the API-key helper text tells operators to set
delete and link actions to Ask first.
- Ditto API keys are not scoped, reach the whole workspace, and act as
the user who created them. Paperclip cannot narrow an issued key.
- The permission-review ledger records live proof for both methods as
not run. The lifecycle checklist in `doc/connections/DITTO.md` still
needs a documented pass with a Ditto workspace, including confirmation
that Auth0 issues a refresh token that `/v2/mcp` accepts.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`, 1M context) in Claude Code, with
tool use (shell, file editing, web research).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge
2026-10-21 11:29:48 -07:00
Nicky LeachandPaperclip 42715d459f Support authenticated WebSocket routes and agent views in plugins (#17111)
## Thinking Path

> - Paperclip manages agents and their work.
> - Plugins provide optional views and connect to external runtimes.
> - A live runtime view needs a binary browser connection.
> - The current plugin API supports JSON routes but cannot proxy that
connection.
> - Agent detail tabs are declared in the plugin contract but are not
mounted on agent pages.
> - This PR completes those two host capabilities and keeps upstream
credentials on the server.

## Linked Issues or Issue Description

**Subsystem affected**

Plugin scoped API routes and agent detail views.

**Problem or motivation**

Plugins cannot expose a binary or text stream through a browser session
without exposing an upstream credential or adding a separate browser
gateway. Agent-scoped detail contributions also have no mount on the
agent page.

**Proposed solution**

Allow declared board GET routes to select a server-only WSS upstream.
Run upgrades through the existing HTTP authentication pipeline and
trusted Origin check. Add agent company resolution with the existing
`agent:read` decision. Mount contributed detail views in agent
navigation.

**Alternatives considered**

A separately hosted viewer needs its own browser credentials and
cross-origin policy. JSON or SSE transport adds encoding and buffering
to a binary protocol.

**Roadmap alignment**

This extends the existing plugin API and detail-tab contract. It adds no
desktop provider to Core. I checked ROADMAP.md and searched related open
PRs; I found no equivalent transport and agent view change.

## What Changed

- Add declared WebSocket routes requiring board authentication, GET, and
`http.outbound`. Reject body-based company resolution because browser
upgrades cannot send a body.
- Keep worker-selected upstream URLs and headers out of browser JSON
responses. Strip browser cookies and Origin. Preserve binary frames and
socket backpressure.
- Close both sockets on disconnect or worker shutdown. Reauthorize on
reconnect after a five-minute connection lifetime. Preserve HTTP
idle-work accounting for the stream lifetime.
- Resolve agent scope through `agent:read` and mount generic agent
plugin detail views, with current agent/view breadcrumbs and browser
titles.

## Verification

- Final head `9d8d269040acf9dc7bb65524876406af522dacb5`: CI passes
(including Runner Rust, build, and browser E2E); Greptile 5/5; no
unresolved review threads; no merge conflicts. Verified 2026-10-21.
- Core server TypeScript check: `node node_modules/typescript/bin/tsc -p
server/tsconfig.json --noEmit`.
- Focused server suites: 17 passing tests
(`server/src/__tests__/plugin-scoped-api-routes.test.ts` and
`server/src/http/server.test.ts`), including arbitrary build-output and
metrics channels with real local text and binary WebSocket round trips,
disconnect cleanup, denied actors and origins, credential exclusion,
agent-read denial, and cross-company 404 equivalence. The test replaces
TLS with local HTTP while retaining the real upgrade and binary stream.
- UI suites: 9 passing tests for independent Insights and Notes
contributions, removed contributions, built-in route preservation,
sidebar links, direct plugin entry and heading updates after tab
navigation. These contributions do not require the WebSocket transport.
- Shared validator suite: 42 passing tests, including rejecting
body-based WebSocket resolution while retaining ordinary HTTP body
resolution and accepting query/entity scopes.
- UI token gates pass.
- UI TypeScript check: `node ../scripts/storybook-catalog.mjs` then `tsc
-b`.
- Shared and plugin SDK builds pass.
- Full Runner build reached its unrelated Rust step and stopped because
cargo is unavailable. Runner TypeScript build was run separately. No
live remote VM was used.

## Risks

- This adds a browser ingress path for trusted installed plugins. The
plugin must select its upstream from a trusted binding. HTTP requests
cannot retrieve the upstream descriptor.
- Membership or binding changes are rechecked on reconnect. Connections
last at most five minutes, and worker shutdown is checked every five
seconds.
- Initial CI caught a missing cross-company 404 guard and an old test
that assumed exactly one upgrade listener. Both were corrected.
Greptile's body-resolution and stale-heading findings are fixed with
regression coverage; latest-head CI passes and Greptile scored 5/5 with
no unresolved findings.
- No schema migration. Rollback restores the previous Core image;
plugins using this transport must be disabled or rolled back first.

## Model Used

OpenAI Codex, based on GPT-6, with reasoning and code/tool execution.
The exact runtime model ID and context-window size are not exposed in
this session.

## Checklist

- [x] Thinking path and issue description included
- [x] Model described
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] No internal issues, private links, or runtime credentials included
- [x] Descriptive branch name
- [x] Focused tests and relevant typechecks run
- [x] Tests and documentation updated
- [x] Risks documented
- [x] All CI gates green
- [x] Greptile 5/5 with no unresolved findings
- [x] I will address review findings before requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-21 10:10:00 -07:00
eece07a747 fix: repair the complete projectless repository setup chain (#17088)
## Thinking Path

> - Paperclip lets people manage agents that do useful work.
> - A projectless task can prepare an authorized repository in its
retained workspace.
> - Setup must hand work to a later run without user supervision.
> - Real task attempts exposed gaps across admission, completion, and
queue dispatch.
> - A successful provider exit did not prove that the requested result
was delivered.
> - This PR repairs the existing lifecycle and checks the complete
repository journey.

## Linked Issues or Issue Description

Refs #17047. This PR includes the preserved repairs from #17049, #17052,
and #17082.

**What happened?**

A projectless native task could stop after requesting a repository. It
could also continue through a timer or generic recovery path and lose
its saved conversation lineage. The latest real Codex and Claude
attempts delivered correct files, but the native continuation had been
folded into the finishing predecessor. Both attempts remain failed
measurements.

**Expected behavior**

Prepare the authorized repository, retain the original context, and
dispatch one saved continuation after its predecessor finishes. Deliver
the verified result in the originating conversation. Stop, current
access, approval, and real blocker rules remain authoritative.

**Steps to reproduce**

Run the explicit automatic-repository suite for native Codex or Claude.
Inspect the downloaded result, original context artifact, both committed
run records, and continuation receipts. The suite uses one attempt and
does not widen the default paid selection.

## What Changed

- Resolve the retained local-board identity through current company
membership and workspace authority.
- Prepare required source dependencies before the isolated server
imports native tool authority.
- Explain the saved repository continuation in production completion
tools. Correct only the exact pending-checkout blocker backed by a live
receipt. Reject an unfinished response wait without a real response
source.
- Preserve the persisted task-session workspace source and its explicit
absence of root repository context. Permit Git's exact no-repository
result only for a validated plain task directory. Keep other Git errors
and linked metadata strict.
- Revalidate server-resolved same-agent continuation values against
current ownership and the saved kind, summary, and key. Carry this shape
through the internal bridge schema. Keep provider-facing schemas
restrictive.
- Preserve terminal result authority after a correlated successful
controller response. Controller rejection creates no result authority.
Bind the shared guidance and transport source in Copilot v55 and
preserve historical identities.
- Admit native status wakes with the existing no-coalescing contract.
The existing deferred queue retains a distinct future dispatch instead
of retagging the finishing run.
- Recover deferred conversation lineage through the actual admitted
dispatch. Accept a null outbox run binding only with matching decision,
effect, dispatch actor, idempotency, task, company, agent, and requester
evidence. Reject a conflicting nonnull binding.
- Independently grade retained random context, actual checkout bytes and
HEAD, accessible output, distinct continuation receipts, and admission
order.

## Verification

- Real database and Git regressions fail before their repairs. Prior
focused cohorts cover local-board authority, optional repository waits,
plain task directories, and first/reused workspace provenance.
- The new valid decision/effect-backed assembled-heartbeat regression
reproduces coalescing into its active predecessor before the queue
repair. With the repair, it dispatches one successor after the
predecessor finishes. Duplicate sweeps create no extra run.
- The deferred-outbox conversation regression fails before its repair.
The repaired test also rejects a conflicting predecessor binding.
- The current queue, continuation, publication, cancellation,
stale-admission, and domain cohort passes 344 checks across 11 suites.
Server and Product E2E typechecks pass. The strengthened
automatic-repository oracle passes 34 calibration checks.
- Three omitted/null/resolved forms pass through the compiled Rust
runner and controlled provider. The prior shared bridge cohort passes
492 TypeScript checks and 399 Rust core checks. Runner source identity,
TypeScript, Rust formatting, and locked Rust typechecks pass.
- Six real local development cells passed ordinary repository,
conversion, and necessary-question journeys. Independent artifacts and
rendered question/result evidence agree. They do not qualify staging or
Slack.
- Both latest automatic-repository attempts delivered correct files but
failed the strict continuation check. They remain failures. A fresh
replay of this queue repair is pending.
- On the combined candidate `380047f4b923807a8c4f7ef6016e4fe130ab4a3a`,
`pnpm -r typecheck` and `pnpm build` pass. Product E2E support passes
3,525 checks with two existing skips, plus 128 source checks. The
complete local `pnpm test:run` is running and is not yet a pass.
- The first replay selection failed catalog validation due to an
operator profile-ID error. A second selection used the wrong
default-model suite and was cancelled before any provider job existed.
Both setup attempts remain recorded. The corrected campaign selects the
recorded GPT-6.1 and Opus 5.5 models plus the local Stop/resume journey.
- Exact-head CI, review, and deployment acceptance remain pending.
GitHub reports delayed PR updates and webhook delivery; the current head
and checks have now propagated. No earlier-head green badge establishes
acceptance of this commit.

## Risks

This changes several boundaries of repository setup. Full product and
deployment acceptance remain required. The queue uses the existing
deferred admission and delivery contracts. Batch deduplication remains
in place. The provenance repair requires the actual bound dispatch and
does not grant publication authority. Current authorization is still
checked at publication. No accepted provider result is rewritten, and
completed provider work is not rerun to repair persistence or delivery.

## Model Used

OpenAI Codex, GPT-6 family, with repository tools and code execution.
The runtime does not expose its exact deployment ID or context-window
size. Those values are not inferred.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Paperclip <paperclip@paperclip.ing>
2026-10-21 11:21:55 -05:00
DottaandPaperclip 3ce8d976a9 Add experimental Paperclip Notebook MCP connection (#16984)
## Thinking Path

> - Paperclip connects agents to external tools through saved accounts
and per-action permissions.
> - Notebook exposes artifact management through an ordinary remote MCP
server with OAuth.
> - A private pilot needs a hidden, default-off catalog and execution
gate.
> - Local file publishing belongs to Notebook, which can accept bounded
file bytes through ordinary MCP tools.
> - Paperclip therefore needs the connector registration and generic
availability checks, with no file-transfer architecture.

## Linked Issues or Issue Description

**Subsystem affected**

Apps catalog, experimental feature metadata, connection setup, and
connector availability.

**Problem or motivation**

Users need to connect Notebook as their Cloud account, assign its tools
to agents, and retain Paperclip's normal Allowed / Ask first / Off
rules. The private pilot must remain hidden until an operator enables
it. Notebook should own its upload protocol and local publishing script.

**Proposed solution**

Register a personal remote MCP OAuth connection at Notebook's canonical
endpoint. Reuse existing OAuth discovery, credential storage, refresh,
reconnect, and removal. Enforce availability through generic catalog
feature metadata and saved application identity. Keep Notebook's
standalone uploader in its own service repository; it calls the ordinary
gateway and receives no saved OAuth credential.

**Alternatives considered**

A gallery-only filter permits retained tools and deep links while
disabled. A shared workspace publisher and private upload-ticket
transport add runtime behavior that a normal MCP connector does not
require. Notebook can receive file bytes directly through its own tools
instead.

**Roadmap alignment**

This extends Connected Apps and supports Artifacts and Work Products.
ROADMAP.md and related PRs were checked. This PR is standalone on
master. The separate OAuth lifecycle and file-transfer proposals (#17085
and #17086) are closed and are not dependencies.

## What Changed

- Register Notebook's personal MCP OAuth method, canonical endpoint,
scopes, catalog metadata, and branding.
- Declare managed `enablePaperclipNotebook` with false defaults and no
user-facing settings toggle or staging opt-in.
- Use generic availability metadata for gallery/setup, retained
connection identity, OAuth completion, health, tool/context discovery,
and dispatch. Resources/prompts recheck before credentials, including
retained handles. Removal remains available while disabled.
- Resolve catalog application identity from the saved application key,
so editable connection labels cannot bypass the hidden gate.
- Select a method's sole supported credential kind when no kind is
supplied.
- Keep UI changes to metadata-driven availability and existing
setup/reconnect controls.
- Document Notebook's service-owned upload script, inline publication,
ordinary action policies, and credential behavior.
- Add ordinary MCP OAuth, assignment, action-policy, disabled-state,
settings, and catalog tests.

No workspace contribution registry, private transfer endpoint, native
publisher, Runner file-reader change, or Paperclip CLI upload command is
included. The entire native-runtime and CLI trees match master. Upload
code lives in `paperclip-cloud/notebook/`.

## Verification

Source head: `65ef741e4f476c67425b57d2fb2d6d4c00e99b06`, directly on
master `53732c811bb69655eb43d3d12f2063ae4ca5ad67`. The diff is 42 files.
Shared execution changes only enforce generic catalog availability; tool
access also resolves saved application identity and the sole supported
credential kind. Neither module contains Notebook upload logic.

- Catalog/shared/settings/UI suites: 592 tests passed across 12 files.
Shared/server/UI typechecks passed using installed compilers.
- Fresh real PostgreSQL generic MCP suite: 84/84 passed at final source;
server typecheck and module boundaries pass. Coverage includes personal
OAuth, ordinary refresh/reconnect, assignments, Allowed / Ask first /
Off, hidden feature enforcement, and local credential removal. Four new
resources/prompts cases failed against the prior code and pass after
filtering saved application identity and rechecking before credentials.
They prove missing/relabelled setup markers and stale eligibility cannot
dispatch or read secrets while disabled; an ordinary provider remains
available with the flag off.
- The full tool-access service suite passed 463/464 cases. One unchanged
Google Workspace `slides.write` case timed out at 15 seconds; it passed
on one isolated retry without source or timeout changes. Its exact test
block matches master. The cause is not established; final-head CI must
qualify the complete suite.
- Maps, module boundaries, token gates, and whitespace checks passed.
Byte comparisons confirm the former transfer/runtime/CLI surfaces match
master.
- Fresh exact-head Greptile is 5/5 with zero unresolved findings after
an exhaustive feedback audit. Current-head CI workflow
[39625691137](https://github.com/paperclipai/paperclip/actions/runs/39625691137)
succeeded, including both required checks (`ci / verify`, `ci / e2e`),
Build, and browser E2E. Supplementary security/advisory scan status is
recorded in the PR Checks panel and qualification receipt; prior-head
scans are not counted. The superseded `4bd7af9b2e` completed CI
successfully, but Greptile found the valid resources/prompts
availability gap described above. It was fixed, replied to, and
resolved; earlier-head results do not qualify this revision.

Preserved environment failures: the first socket-restricted UI/route run
had 93 listener setup failures, and the same 93 cases passed with
local-socket access. The package-manager launcher could not fetch its
signature metadata; installed compilers passed without dependency or
configuration changes. The full service timeout and isolated retry
remain recorded separately. The superseded `585e870e73` CI also failed
an unchanged agent-chat project-plan revision assertion after task
creation; the complete spec and relevant runtime sources match master,
and a same-master prior run passed. Its cause is not established. Logs
are preserved; no test or timeout was weakened and no old-head rerun was
requested. The subsequent heads run full CI independently; no prior-head
pass substitutes for current qualification.

The Notebook uploader requires a separate service release. This public
PR adds no uploader runtime to Paperclip and claims no newly deployed
browser/agent acceptance. The Notebook-owned upload path is qualified
separately. Code-owner review remains required before merge.

## Risks

- The feature flag gates the curated connector; it does not create a
Notebook service-side team allowlist or block arbitrary standard MCP
URLs.
- Publishing, sharing, and deletion retain the existing assignment and
action-policy boundaries.
- The hidden feature must be checked for retained tools and saved
identity, including when connection labels change.
- Disconnect removes local credentials. It does not revoke the remote
Notebook authorization; the owner can revoke it in Notebook.
- Ordinary refresh uses the existing client. A lost response after
refresh-token rotation can require reconnect.
- The standalone Notebook script and its bounded upload tools must ship
together in the Notebook service before that documented convenience path
is available.
- No database schema, workflow, lockfile, shared transfer, or Runner
change is included. No merge, deployment, or rollout is performed by
this update.

## Model Used

OpenAI GPT-6 in Codex, with reasoning, repository inspection, code
execution, and tool use. The runtime did not expose a more specific
model ID or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-21 11:07:18 -05:00
Nicky LeachandPaperclip 00331e0254 Connect native Runner admission to plugin-owned workspaces (#16978)
## Thinking Path

> - Paperclip manages work for AI agents.
> - A plugin can own an execution environment and its files.
> - #17029 supplies the task driver and bounded setup verification.
> - Heartbeat still prepares workspace files on Core and expects a shell
transport.
> - This PR gives the selected plugin ownership of workspace preparation
and native task execution.
> - Core keeps admission, tool authority, and recovery checks.

## Linked Issues or Issue Description

**Subsystem affected**

Heartbeat workspace admission and native Runner execution.

**Problem or motivation**

A task-only plugin cannot run through Core filesystem staging or shell
execution. Native admission and recovery must use the same lease and
workspace ownership.

**Proposed solution**

Use the task driver from #17029. Resolve workspace and project
identities without Core file operations. Connect native dispatch and
restart recovery to that driver.

**Alternatives considered**

Keep workspace admission and dispatch in one change. A workspace change
alone would leave dispatch on the previous transport. An execution
change alone would leave Core staging files for the wrong host.

## What Changed

- Enable plugin environment selection for native workspace sessions.
- Resolve workspace metadata and authorized project references without
Core checkout, copy, or provision operations.
- Preserve agent-default and primary workspace policies. Use the pinned
workspace provider for plugin-backed project storage. Reject unsupported
Core service commands and cross-owner reuse.
- Connect native execution to the prepared task driver. Keep assigned
MCP authority on Core.
- Save exact checkpoint identity, transfer selected account refreshes,
and require termination proof before replacement or cleanup.
- Complete managed plugin workspaces through their storage provider. Use
the same check after a restart. Keep branch validation and leave
task-owned files on the plugin.
- Include default instruction content in runtime synchronization when no
instruction directory exists.
- Defer new-agent Copilot verification until the saved-agent lifecycle
can acquire the agent-owned computer.

## Verification

- Rebased onto `origin/master` at `898144f4b3`. Master advanced once
during verification. Both manual conflicts joined import blocks: one in
`native-session-executor.ts`, and one in
`heartbeat/runtime-execution.ts`. The seven patches retain their logic.
The first rebased head passed repository typecheck, build, all 862
focused execution/finalizer cases, and all CI gates. The latest head
`93e5a72892` passes server typecheck and all 880 focused execution,
finalization, and execution-control notification tests. All 54 CI/review
checks pass, with two expected skips. Greptile ran automatically and
scored this head 5/5 with no unresolved findings. No new review or Apex
request was made for these import-only resolutions.
- The successful CI workflow initially left three stale job-check
reports. Targeted policy and summary reruns cleared the reports. No
source change or test fix was needed.
- Repository typecheck and build pass: `pnpm -r typecheck` and `pnpm
build`.
- Focused native execution and restart tests pass: 795 cases. The
account and harness suites pass: 159 cases. Workspace admission passes:
48 cases. The SDK task lifecycle, workspace API, runtime-hook, and
instruction checks also pass.
- The heartbeat integration case uses the merged workspace provider
contract and reaches native dispatch with no project files on Core. The
new-agent case confirms that creation leaves the agent in `preparing`
until lifecycle verification.
- Map validation and the Copilot source-identity check pass. No Runner
implementation or source-identity bump is in this PR.
- The first rebased workspace run found two stale path assertions and a
recovery guard that did not recognize task-owned targets. These are
fixed. The storage integration fixture also needed its persisted source
binding; the production authorization check stays in place.
- Two prior review findings required rejection of Core service startup
and cross-owner workspace reuse. The existing admission fixtures now
check both failures. The installed-account authentication finding was
fixed in merged #17029.
- Tests reuse the current fixtures. No new provider test matrix or live
Runner process is added for these fixes.
- The prior head `2db273ec12` passed CI on its first attempt and reached
standard Greptile 5/5. Apex scored 4/5 and found local-folder checks
during plugin completion and recovery.
- The completion fix reproduces both failures. It passes all 110 cases
in the runtime execution, workspace finalizer, and workspace provider
integration suites. Server typecheck and map checks pass. CI passed on
`62d8335b4e` on its first attempt, and standard Greptile scored 5/5. The
next Apex review scored 4/5. It found that a failed plugin inspection
could abort restart recovery.
- The restart fix records a failed workspace receipt and uses the
current run retry policy. A regression first reproduced the aborted
pass. It now checks retry state, retained results, and completion of
another workspace in the same pass. All 68 finalizer cases and server
typecheck pass. CI passed on `7d4016323b` on its first attempt. Standard
Greptile and Apex both scored 5/5. Apex left one P2 about lost failure
codes.
- The diagnostic fix keeps the known branch and owner mismatch codes in
receipts and run recovery state. It gives repair guidance for those
codes and keeps unknown plugin errors generic. All 96 affected finalizer
cases and server typecheck pass. Before the rebase, required CI passed
on `c2fa61c6c8` on its first attempt. Standard Greptile and Apex both
scored 5/5 on that head, with no unresolved findings. The new head
retains these reviewed patches.
- The earlier Superagent scan on `c2fa61c6c8` was inconclusive after a
pinned merge-base checkout failed or timed out. The current scan on
`93e5a72892` passes.
- The exact rebased head passes all 48 workspace cases and server
typecheck. The first local test launch could not bind PostgreSQL inside
the sandbox. The authorized local-server run passed.
- The prior head reached standard Greptile 5/5. Its first CI run hit an
unchanged Runner cleanup timeout and an external build-runner shutdown.
Both jobs passed on the single retry. The timeout cause is not
established.
- A local regression check found that a retained Core workspace could
also enter a plugin task without file transfer. Core now rejects this
move before provider work. The existing ledger test covers both
directions and confirms that the source files stay intact.
- The first active standard review scored 4/5. It found that a fresh
plugin retry could enter Core Git preparation. This mode now uses the
existing unsupported-storage error before workspace resolution or
acquisition. Both unsupported-mode cases pass, and server typecheck
passes.
- No live Cloud or provider validation was run.

## Risks

- The prerequisite #17029 is merged. This PR targets master.
- Native plugin tasks support per-turn workspace sessions. Core service
commands and fresh retries that import retained files remain
unsupported. A workspace storage plugin can use the modes and strategies
it declares.
- Core-managed credentials support Codex and direct Claude accounts.
Other managed credential routes fail closed. Other harnesses can use an
installed account.
- A provider must preserve its prepared configuration and report process
termination correctly. Uncertain termination keeps the task pending
cleanup.
- Cloud deployment and live provider validation remain separate.

## Model Used

OpenAI Codex, GPT-6. The exact model ID and context window are not
exposed in this session. Tool use includes code editing, local tests,
and the GitHub CLI.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have described the issue in-PR following the relevant issue
template
- [x] I have not referenced internal/instance-local Paperclip issues or
links
- [x] My branch name describes the change and contains no internal issue
details
- [x] I have run focused tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-21 08:22:48 -07:00
DottaandPaperclip dff63551fe fix: resume unfinished work after repository preparation (#17047)
## Thinking Path

> - Paperclip manages agents that perform work for a company.
> - Task repositories are prepared at normal run admission.
> - A running native task can stage a repository while its work remains
unfinished.
> - The controller did not offer that saved setup as a continuation.
> - The agent could add a timer or wait for a user restart.
> - This change uses the existing same-agent continuation and status
ledger.
> - The accepted explanation and proven conversation remain available
after setup.

## Linked Issues or Issue Description

Refs #17045. That prerequisite has merged. This PR targets master.

**What happened?**

A projectless native task can request a repository for the next
admission. An unfinished task has no server-selected repository
continuation. An explicit same-agent continuation also loses chat
provenance.

**Expected behavior**

An unfinished standard task can yield and resume through the existing
admission queue. Its explanation and final result retain the authorized
conversation. A task that only stages a repository can complete without
another run.

**Steps to reproduce**

1. Start a native standard task in a task directory.
2. Request an authorized repository through prepare_repository.
3. Yield with unfinished work and no explicit continuation.
4. Observe that the former driver rejects the yield, although the
pending repository is saved.

## What Changed

- Offer a saved same-agent continuation for the current task's pending
repository.
- Accept that current server continuation in the shared provider driver.
- Resolve chat provenance through applied status decisions, delivered
effects, and admitted wakes.
- Preserve accepted setup explanations without repeating an owned
question card.
- Document optional reproduction details and configured repository
discovery.
- Extend database regressions and workspace access maps.
- Preserve Copilot profile v52 and bind the shared continuation source
in v53. Include the active identity in the QA image fingerprint.

## Verification

- Five focused server suites: 100 checks pass.
- Shared continuation driver: 12 checks pass.
- Server typecheck passes.
- Map contract and whitespace checks pass.
- Existing API and driver assertions fail on the former implementation.
- Real dispatcher and queue cohort: 43 checks pass. The original
reply-loss regression fails before the dispatch receipt fix.
- Continuation driver and installation identity cohort: 62 checks pass.
- Regenerated capability inventory and contract checks pass.
- Final response precedence cohort: 109 checks pass. The stale-comment
case fails on the former implementation.
- All required CI checks, build, and both source reviews pass on
b9c8677635.
- Live provider journeys and deployed acceptance remain pending. No live
qualification is claimed.

## Risks

A pending repository now offers a next admission when unfinished
standard work yields. Incorrect eligibility could create unwanted work.
The lookup requires the current workspace and task. Explicit completion
does not use it. Existing Stop, admission, approval, and transport
authorization remain authoritative. No schema or public task-status
change is included. The shared continuation change requires a new
Copilot source identity. This PR preserves v52 history and does not
claim fresh Copilot live qualification.

## Model Used

OpenAI Codex, GPT-6 family, with repository tools and code execution.
The runtime does not expose its exact deployment ID or context-window
size. Those values are not inferred.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-21 07:17:50 -05:00
8b873e0112 fix(adapter-utils): skip the materialize lock for an already-current skill (#17061)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - A remote Claude ACP run stages the selected runtime skills into the
sandbox. The host archives the materialized skills directory with tar
and uploads it.
> - Concurrent runs of one agent share that skills directory. The
directory key is the selected skill set and its content.
> - Each run calls `materializePaperclipSkillCopy` for each skill. The
function always created and removed a sibling `<skill>.lock` directory,
even when the copy was already current.
> - The archive step lists the directory entries first and then gives
the names to tar. When a concurrent run removed its lock between these
two steps, tar failed with `Cannot stat` and the whole run failed as
`adapter_failed`.
> - This pull request checks the materialized fingerprint before it
takes the lock. An up-to-date copy now leaves no transient entries in
the shared directory.
> - The benefit is that concurrent runs of one agent no longer fail each
other's skill staging.

## Linked Issues or Issue Description

**What happened?**
A remote `claude_local` run failed before the agent started. The skill
staging step ran `tar -c ... -T entries.nul` on the shared
runtime-skills directory. Tar stopped with `tar: <skill>.lock: Cannot
stat: No such file or directory` and exit status 2. Another run of the
same agent was materializing the same skills at the same time.

**Expected behavior**
A run that finds its skills already materialized does not change the
shared skills directory. Concurrent runs can archive that directory
safely.

**Steps to reproduce**
1. Materialize a skill into a skills directory.
2. Call `materializePaperclipSkillCopy` again in a loop for the same
skill.
3. At the same time, call `createTarballFromDirectory` on the skills
directory in a loop.
4. Before this change, most archives fail with `Cannot stat` on
`<skill>.lock`.

**Agent adapter(s) involved**
`claude_local` (ACP, remote sandbox). The function is shared, so
`grok_local` and the Codex and Gemini ACP skill paths also benefit.

## What Changed

- `packages/adapter-utils/src/server-utils.ts`:
`materializePaperclipSkillCopy` hashes the source and checks the
materialized sentinel before it takes the lock. When the copy is
current, it returns without creating the lock directory or a temporary
copy. The existing check inside the lock stays, so a copy that is
missing or out of date still uses the lock as before. The source is
hashed once per call, the same as before.
- `packages/adapter-utils/src/server-utils.test.ts`: a new test holds a
live lock from another owner, then materializes an already-current
skill. The call must return at once and must not change the lock or the
directory.

## Verification

- `cd packages/adapter-utils && npx vitest run
src/server-utils.test.ts`: 132 passed.
- Red/green: without the fix, the new test times out because the call
waits on the live lock. With the fix, it passes.
- `npx vitest run src/acpx-engine/execute.test.ts -t skill`: 15 passed.
- `npx tsc --noEmit -p tsconfig.json` in `packages/adapter-utils`:
passes.
- Real-dependency race check (a temporary script, not committed). The
script used real files and the system tar. It ran
`materializePaperclipSkillCopy` for 5 skills in a loop while
`createTarballFromDirectory` archived the same directory for 8 seconds:
- Before the fix: 1994 of 2307 archives failed with `tar: skill-1.lock:
Cannot stat: No such file or directory`.
  - After the fix: 0 of 2021 archives failed.
- Assumption under test: the sentinel check outside the lock is safe.
The sentinel is written into the temporary copy before the atomic
rename, so a matching sentinel means a complete copy. The lock never
protected readers: the caller already reads `SKILL.md` after the lock is
released.
- Remaining limit: the first materialization of a new skill set still
uses the lock. A concurrent archive of the same directory is unlikely
then, because a run archives the directory only after it has
materialized every skill in it.

## Risks

- Low risk. The change only skips the lock when the result is already
correct. A missing, damaged, or out-of-date copy uses the same locked
path as before.
- No change to the materialized layout, the sentinel format, or the lock
format.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- Anthropic Claude Opus 5.5 (`claude-opus-5-5`) in Claude Code, with
tool use (shell, file edits, test runs). The exact context-window size
is not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: devinfoley <139239+devinfoley@users.noreply.github.com>
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-10-21 00:14:53 -07:00
Nicky Leach 65f59e339a Extend native instance secrets to project lifecycle plugins (#17034) 2026-10-20 20:09:16 -07:00
bbcf5dfe98 fix(heartbeat): renew legacy controller leases on a private pool (#17032)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - A legacy (non-native) agent run keeps a controller lease on its
`heartbeat_runs` row. The server renews the lease every 10 seconds. If
no renewal succeeds in 60 seconds, the watchdog stops the run with
`renewal_deadline`.
> - #16359 added timings to lease-loss reports. The first staging event
with these timings shows `deadlineLateMs=0`, `renewalPendingMs=50000`,
and 108 renewals in about 22.5 minutes, where about 135 are expected.
Thus the event loop was not blocked. One renewal UPDATE was in flight
for 50 seconds, and renewals were slow for a long time before the loss.
> - The agent had exited with code 0. The run was in post-execution
`sync_back`. Other runs on the same host completed. No code path held a
lock on the run row across slow work. A later `instruction_save` UPDATE
on the same row completed while the earlier renewal was still pending,
so a row-lock wait does not explain the stall.
> - postgres.js 3.4.9 sends a new query to a busy connection when no
connection is idle (`handler` → `go(busy.shift(), query)` in
`src/index.js`). The query waits behind the statement that is in flight
on that connection. The renewal had no timeout, and the `pending` flag
stopped all later renewals. Thus one slow unrelated statement on the
shared pool can stop a healthy run.
> - This pull request moves lease renewal to a small private pool,
bounds each attempt with a statement timeout, and retries a timed-out
attempt until the existing lease deadline.
> - The benefit is that slow application queries on the shared pool can
no longer cancel a healthy legacy run.

## Linked Issues or Issue Description

Refs #16359 (lease-loss timings that identified this cause)
Refs #16358 (pre-dispatch lease loss becomes retryable; different path)
Refs #16917 (open: keeps a clean adapter result after a lease lapsed; it
does not prevent the loss)
Refs #13389 (open: host sleep / late timers; different cause)

**What happened?**
A staging legacy `claude_local` run was cancelled with `Legacy
controller lease lost (renewal_deadline)` after the agent exited with
code 0. The timings show that the deadline timer ran on time, and one
renewal UPDATE was pending for 50 seconds.

**Expected behavior**
A live controller keeps its lease. Slow unrelated database work does not
cancel the run.

**Steps to reproduce**
1. Create a database client with one pooled connection.
2. Start `select pg_sleep(5)` on that client.
3. Call `watchLegacyControllerLease(...).assertOwned()` with the same
client.
4. Before this change, the renewal waits about 5 seconds behind
`pg_sleep`. With a long enough slow statement, the lease deadline stops
the run.

## What Changed

- `packages/db`: Add `livenessDb(db)`. It gives each `createDb` client a
private pool of at most 2 connections
(`application_name=paperclip-controller-lease`). The pool is created on
first use. Test doubles and transactions get the original client back.
- `packages/db`: Add `closeLivenessDb(db, timeoutSeconds)`. The server
calls it in `closeDatabaseClients`, so shutdown and failed startup end
the private pool too.
- `legacy-controller-lease.ts`: The watchdog renews in a transaction on
the private pool. Each attempt sets a transaction-local
`statement_timeout` of 10 seconds. A timed-out attempt (`57014`) is
retried. After a successful retry, the local deadline is measured from
that attempt's start, because that attempt's UPDATE wrote the fresh 60
second lease. The existing 60 second deadline, the abort race, and the
`renewal_rejected` / `renewal_error` attribution do not change.
`renewLegacyControllerLease` itself does not change, so the
runtime-selection caller inside its own transaction is not affected.
- Tests: a saturated shared pool no longer delays renewal; a renewal
that times out on a locked run row retries and keeps the lease; the
private pool is cached per client, has its own `application_name`, and
closes; after a 45 second timed-out attempt and a successful retry, the
next deadline is a full 60 seconds after the retry. The existing test
doubles now model the transaction.
- `docs/deploy/database.md`: Count the up to 2 extra connections per
server process when you size `max_connections`.

## Verification

- `cd server && npx vitest run
src/services/legacy-controller-lease.test.ts`: 20 passed, on embedded
Postgres.
- Red/green: with the old `legacy-controller-lease.ts` and the new
tests, the saturated-pool test fails with `expected 5018 to be less than
2000`. With the fix, it passes.
- Red/green for the retry deadline: with the deadline measured from the
first attempt, the retry-deadline test fails (`expected true to be
false`) because the run is aborted 15 seconds after the retry. With the
fix, it passes.
- Mutation check: when the timeout retry is removed, the locked-row test
fails with `canceling statement due to statement timeout`.
- `npx vitest run src/__tests__/heartbeat-process-recovery.test.ts -t
"lease|dispatch|controller|interaction"`: 43 passed.
- `npx vitest run src/services/heartbeat/run-completion.test.ts
src/__tests__/heartbeat-orphaned-active-lease-sweep.test.ts`: 53 passed.
- `npx vitest run src/__tests__/server-startup-feedback-export.test.ts`:
passed.
- `cd packages/db && npx vitest run src/work-signals.test.ts
src/client-options.test.ts src/client-teardown-registry.test.ts`: 24
passed. `npx tsc --noEmit` for `packages/db` passed.
- Not run locally: the full server `tsc` and the full server suite. The
sandbox has a 4 GB memory limit, and `tsc` was killed (exit 137). CI is
the gate for the server typecheck, the full tests, and the build.

## Risks

- Each server process can open up to 2 more Postgres connections.
Deployments that are at their `max_connections` limit must allow for
them. The docs now say this.
- A renewal attempt is now 4 statements (BEGIN, `set_config`, UPDATE,
COMMIT) instead of 1. Each statement is a short primary-key operation on
a dedicated connection.
- If many runs wait on locked run rows at the same time, renewals for
other runs can queue on the 2 private connections. The 10 second
statement timeout limits each wait, which is less than the 60 second
lease.
- Behavior for a real lease loss does not change. A rejected renewal and
a non-timeout error still stop the run at once, and the 60 second
deadline still applies.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, used through Claude
Code in agent mode with tool use (shell, file edit, and test execution).
A read-only subagent helped with code search.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: devinfoley <139239+devinfoley@users.noreply.github.com>
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-10-20 18:13:53 -07:00
Nicky LeachandPaperclip e5351b240a Verify native Runner setup through plugin tasks (#17029)
## Thinking Path

> - Paperclip manages work for AI agents.
> - An environment plugin can own a Runner task.
> - The merged launch-preparation contract lets the execution owner
build the provider configuration.
> - Core still needs a task process owner and a setup test that uses
that configuration.
> - This PR connects the task API to the Runner process-owner contract.
> - Operators can test a plugin environment before Core sends it task
work.

## Linked Issues or Issue Description

**Subsystem affected**

Runner, plugin SDK, and agent environment tests.

**Problem or motivation**

A task-only environment cannot use the shell-based setup path. Core must
verify the Runner hello exchange and process cleanup through dedicated
task operations.

**Proposed solution**

Add a lease-bound task driver and use it for a bounded setup probe. Keep
heartbeat admission and task execution in #16978. This PR follows the
merged launch-preparation contract in #16997.

**Alternatives considered**

A provider declaration alone cannot prove that Runner and the provider
connect. A shell bridge would give the plugin an unnecessary command
interface.

## What Changed

- Pass structured Runner launch data to process owners. Support an
external connection and explicit detach.
- Add typed launch authentication checks and checkpoint operations.
Check lease, run, project, and retained-task authority.
- Connect launch preparation, PRP, termination proof, and credential
handoff to the task driver. Reject local environment overrides during
installed-account setup. Pass saved-account identity and credential home
directly from Core.
- Run a short-lived setup probe through the existing agent environment
test API. Require a verified provider hello and cleanup. Keep saved
Copilot account checks metadata-only through a dedicated task operation.
- Update the Copilot source identity because the shared transport source
changed. Keep provider behavior and the earlier identity fixture.

## Verification

- CI passes on `f987adec7`: 55 successful checks and 5 expected skips.
Standard Greptile and Apex are both 5/5 with no open findings. The
branch merges cleanly with current master.
- Repository typecheck and build pass after the rebase onto the
workspace-provider contract. Server typecheck and build also pass after
the final setup fix.
- The 110 focused lease, SDK, setup, Copilot, and route cases pass after
the rebase. All 14 setup cases pass after the final change. These
include a real local Runner with a test provider. The saved-agent
model-discovery case also passes.
- Apex found that Core's relative workspace marker failed the driver
path check, and non-Codex sessions omitted the observed model. Both
failures were reproduced and fixed. The probe leaves physical workspace
selection to plugin preparation. The transport reads each provider's
observed model and exposes it to the driver. All 14 setup cases, 6
transport peer cases, and both existing real Runner/OpenCode cases pass.
Runner build and server typecheck pass.
- The coverage audit removed two redundant cases, repeated fixture code,
and two extra real Runner launches. It kept authorization, credential
selection, cancellation, lost replies, termination proof, checkpoint
identity, and provider setup checks.
- The Copilot source-identity check passes. The added-line secret and
PII scan passes. The unmerged v52 attestation was regenerated after the
shared transport fix.
- CI on `13faeff02` caught one stale Copilot digest assertion after
attestation regeneration. The literal now matches the candidate
attestation, and all 49 installation cases pass. That CI lane otherwise
passed 1,818 cases.
- An earlier CI run hit an unchanged UI toast timing test. The separate
fix is tracked in #16952. Current CI passes that shard. CI also caught a
stale model-discovery assertion in this change; the assertion is fixed.
- The local full-suite run was stopped when master changed. The final CI
run supplies exact-head full-suite validation. No live Cloud or provider
test was run.

## Risks

- Native hello tests require a saved Core account or the installed
account. Local environment overrides are unsupported for
installed-account probes and fail before the provider runs.
- A native task provider must declare launch preparation and
authentication-check version 1. It must keep the checked configuration
fixed through submission. Core rejects providers that cannot make this
guarantee.
- A lost task reply does not prove process termination. Core retains
grants until the provider proves termination and Core saves required
state.
- This PR does not enable native heartbeat dispatch through plugin
environments. Cloud deployment and live provider validation remain
separate.

## Model Used

OpenAI Codex, GPT-6. The exact model ID and context window are not
exposed in this session. Tool use includes code editing, local tests,
and the GitHub CLI.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have described the issue in-PR following the relevant issue
template
- [x] I have not referenced internal/instance-local Paperclip issues or
links
- [x] My branch name describes the change and contains no internal issue
details
- [x] I have run focused tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-20 18:13:09 -07:00
Nicky LeachandPaperclip 79b2bf78dd Create agent records when onboarding names are submitted (#17005)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Core onboarding selects an agent and connects its provider account.
> - The current flow creates the agent record after authentication.
> - Setup needs a stable agent identity as soon as the user submits its
name.
> - This PR saves a paused setup record on name submission and finishes
the hire on that same record.
> - The existing sandbox authentication and approval paths continue to
apply.

## Linked Issues or Issue Description

**Subsystem affected**

Core agent lifecycle, shared validators, and onboarding UI.

**Current behavior**

Onboarding creates the database record at the final hire step. Earlier
authentication and saved setup have no agent record.

**Proposed behavior**

Create a paused agent with a setup hold when the user submits its name.
Do this before adapter selection or authentication. Update that same
record after adapter selection. Reuse its ID on retries and saved setup.
Finish that record through the existing hire path.

**Reason and benefit**

Give setup a stable identity without coupling this refactor to computer
provisioning or a new execution backend.

**Breaking changes**

Incomplete setup now leaves an inactive agent record. Existing clients
can still create and hire agents without the new optional fields. The
sandbox authentication flow and API key support remain in place.

**Additional context**

Requested Core-only refactor. Related work: #15422 changes runner
defaults. This PR preserves those choices. No duplicate early-record
refactor was found in the issue and PR search.

## What Changed

- Save the agent when the user submits its name in both onboarding entry
points. Use a provisional adapter until the user chooses one. Reopen
name-only drafts at adapter selection.
- Add retry-safe setup creation and same-record hire completion. Keep
approval checks at final hire.
- Save and restore setup configuration in both onboarding entry points.
Show Finish setup for paused setup agents.
- Restrict setup changes to authorized board users. Block generic resume
until setup finishes.
- Add lifecycle, authorization, connection, and UI coverage. Update the
specification and feature maps.

## Verification

- Latest focused server run: 126 lifecycle and AI-connection tests
passed after the Apex fixes. An earlier broader run passed 301
lifecycle, instruction, adapter-validation, and AI-connection tests.
Earlier authentication, retry, cross-company, and direct-create
regressions also passed.
- Name-save verification: 336 tests across the wizard, naming dialog,
New agent, action-button, and wizard-step suites passed. Coverage
includes retry identity, repeated submission, closing during a save,
saved-model restoration, and a disabled process adapter.
- Shared, server, and UI TypeScript checks passed. The latest UI package
check and direct server TypeScript check passed. The server package
preparation command could not finish locally because Cargo is
unavailable; full build preparation runs in CI. Map checks, token gates,
and `git diff --check` passed; each pushed diff was scanned for
credentials and PII.
- All six onboarding browser tests passed together with installed Chrome
against a fresh throwaway instance after the Apex fixes. They include
numbered duplicate names, first-time Copilot without a connected
account, and Grok’s saved model. They verify early persistence in both
entry points, closing and reopening a name-only draft, same-record
adapter selection, sandbox sign-in, login reload, and failed-connection
gating. Provider responses are simulated; Core persistence is real.
- Regression coverage includes incomplete Copilot creation versus final
validation, Kimi settings through redacted responses, stale local
drafts, company switches during creation, saved environments, and
provider changes with personal/shared old bindings.
- Apex found five name-only setup gaps: numbered names, early Copilot
account validation, the Grok model default, same-name draft ownership,
and provisional runner restoration. The fixes preserve server names,
defer implicit account binding until hire, set Grok’s model, avoid
name-based reuse of unfinished records, and restore Auto for pending
adapter choices. UI, database, and browser regressions cover these
cases.
- Standard Greptile found a Grok provider mismatch in the new adapter
save. The save now uses ACPX with the Grok profile. Both the 129-test
dialog/setup run and a real-API browser regression passed after the fix.
The first browser attempt stopped on an ambiguous empty-roster button
selector; it now scopes the click to the toolbar.
- Moving the save point exposed a saved-model reset and timing
assumptions in the same-name and portal fixtures. The source choice now
preserves the restored model, and tests cover same-name recovery without
a second hire.
- Initial CI exposed direct-create compatibility, concurrent setup
effects, fixture assumptions, and a missing-fields assumption in the
provider-validation guard. These were fixed and verified locally. Review
findings were addressed with authorization, recovery,
credential-persistence, and restored-configuration regressions.
- The final desktop capture passed after host resource cleanup. A repeat
first failed before Core started because macOS had exhausted
shared-memory IDs. Standalone PostgreSQL initialization reproduced the
same error. Releasing only unattached control segments from this task’s
stopped test databases allowed the unchanged revision to pass. No Core
or system setting changed.
- Local database tests required port access outside the sandbox. Missing
declared development dependencies were supplied outside the branch. No
live provider sign-in was tested locally.
- [Full monorepo
CI](https://github.com/paperclipai/paperclip/actions/runs/39522434236)
is green on `82b82fec189a172a885d4dd565ae2f4a18c73efc`. Standard
Greptile scored 5/5 with zero new comments (check `118969424903`). The
subsequent Apex review also scored 5/5 with zero new comments (check
`118972866331`) on that same commit. All review threads are resolved.
- The separate Superagent Security scan returned neutral/inconclusive
because its pinned merge-base checkout failed or timed out. GitHub
returned 404 for check and suite rerun requests. This is not a
successful security scan; the CI workflow and other security checks
passed.

## Risks

- Users can leave inactive setup records behind, including after name
submission alone. These records cannot run until hire completes.
- Setup completion touches hiring and approval boundaries. Tests cover
retries, company isolation, creator permissions, and approval snapshots.
- An uncertain credential-save result retains its new secret reference
for retry. A confirmed client rejection removes only credentials staged
by that attempt.
- No schema migration or VM provisioning change is required.
Agent-computer integration is out of scope.

## Model Used

OpenAI Codex, based on GPT-6, with repository search, code editing, and
tool execution. The exact deployment ID and context window are not
exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] Apex Greptile is also 5/5 on the same commit as standard review
and green CI
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-20 18:08:57 -07:00
DottaandPaperclip d33b40a5c3 fix: recover saved work and provide reliable task Retry (#16965)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The control plane must retain work when an execution or workspace
export fails.
> - Retained-workspace holds can leave saved input waiting with no
usable Retry action.
> - Users cannot verify process ownership or repair provider
allocations.
> - This pull request gives system recovery a durable budget and gives
each deliberate Retry a durable intent.
> - Safe recovery can preserve files, settle an accepted result, or
prepare an independent workspace.
> - One task state keeps infrastructure diagnostics out of the ordinary
conversation while preserving real permission and approval gates.

## Linked Issues or Issue Description

**What happened?**

A task with a retained workspace can show recovery, failed-run and
saved-message warnings at the same time. Historical runs without native
workspace descriptors cannot use the native restore path. Old recovery
metadata can prevent a new attempt even when an independent workspace
would be safe.

**Expected behavior**

Paperclip owns bounded infrastructure retries and file preservation. A
user can request another attempt with ordinary Retry. Thinking appears
immediately. The service preserves completed effects and current user
controls. It does not claim that starting fresh recovered the old files.

**Steps to reproduce**

1. Retain a failed run and its workspace after export or process-stop
failure.
2. Save a follow-up while the recovery hold is active.
3. Open the task and try to continue without infrastructure credentials
or operator certification.

Refs #16906, #16835, #16883. This extends their recovery and receipt
contracts. Related work: #16962 and #16963.

## What Changed

- Add task-level Retry with company-scoped authorization, all-status
idempotency and durable admission before physical work. Keep exact-run
Retry compatible.
- Add typed recovery phases, finite persisted backoff, historical
adoption and durable local failure diagnostics.
- Preserve native workspaces or verified historical snapshots. Admit an
independent fresh workspace only after execution containment. Keep
old-source preservation and cleanup obligations separate.
- Carry completed publication and API receipts forward. Fence uncertain
mutation retries across replacement runs. Preserve connected-chat
identity and authorization.
- Re-enter normal dispatch for saved input. Reuse accepted results
through the existing finalizer.
- Use one task interruption projection across the thread, composer and
task list. Show optimistic Thinking, ordinary Retry and genuine user
gates.
- Add PostgreSQL, filesystem, API, browser-fixture and controlled
provider coverage. Document the behavior and update the feature/access
maps.

## Verification

- All GitHub Actions CI jobs pass on
`6d8c6d27d50586d8548b31d03b47f6d73a0ee11d`: typecheck, all
server/chat/workspace and serialized suites, Runner checks, eight
browser shards, canary and build. The required merge gate passes.
- Greptile reviewed the final commit at 5/5, with no actionable findings
or unresolved review threads. Its two earlier P1 findings are fixed.
- Full recursive typecheck and build pass locally on the final commit.
All 16 task Retry cases pass against isolated real PostgreSQL. The
unrelated-success case and both stale Retry cases fail on the previous
code and pass after the fix.
- The corrected gateway fixture passes its uncertain-mutation and
independent-read case. Four real HTTP API cases pass for definite
403/422 rejection, completed-effect reuse, and uncertain-effect fences
across deliberate and automatic retries. These focused gateway/API
checks used a temporary database lifecycle harness on an existing
healthy local PostgreSQL process. The standard repository helper is
unchanged.
- Earlier qualification covers 291 task UI cases, saved-file copyback
and ancestry, current Agent Chat ownership races, nine chat Retry API
browser cases, and six assembled browser recovery fixtures. A real
API/PostgreSQL/native-runner journey showed Thinking in 25 ms despite a
delayed response, admitted one successor in a separate workspace,
retained original files, and survived reload.
- The controlled Daytona test interrupts export, joins the controller,
restarts it in a separate process, and verifies one agent start, one
external sentinel operation, retained file contents and no premature
cleanup. It does not establish abrupt-kill or live LLM/GitHub
acceptance.
- The full local `pnpm test:run` was attempted and was not green: an
OAuth row-lock timing assertion failed, and a later suite exhausted
macOS PostgreSQL semaphores. The ten OAuth timing cases passed on rerun
against a separate database. Later embedded database initialization
failures remain recorded; the final CI matrix passes.
- Security scanning passed on production-code commit
`63953edf069b111c6becc3144dffa6deb52f68b5`. Its only successor changes
one test-fixture identity line. The final scan is neutral/inconclusive
because its pinned merge-base checkout failed or timed out. Both rerun
API requests returned 404, so no fresh successful scan is claimed.
Socket and Snyk checks pass on the final head.
- The optional Paperclip Review remains queued behind an earlier run in
workspace finalization. Its prior completed assessment was incomplete
because a comparison tool was blocked by the platform filter. It is not
counted as a completed code review. GitHub does not require this check
for merge.
- Hosted acceptance remains pending deployment. Local and CI results do
not establish recovery of a hosted task or its retained files.

## Risks

- Recovery changes span admission, physical ownership and dispatch.
Incorrect evidence could permit overlapping work. Existing physical
locks and authoritative stop requirements remain in place.
- The migration adds concurrent indexes. It requires the existing
top-level migration runner and retries incomplete index creation safely.
- A fresh attempt can complete while old-source preservation remains
unresolved. The service retains that obligation and does not report
those files as recovered.
- Unknown tool mutations remain blocked until their authoritative
receipt owner resolves them. Generic upstream tools have no universal
result-query protocol.
- Recovery and diagnostics stay inside the stack. No Cloud incident
endpoint, notification worker or new outbound reporting channel is
included.

## Model Used

OpenAI Codex, GPT-6 family. The runtime does not expose a more specific
model version or context-window size. The model used reasoning, shell
execution, source editing and browser tools. No model subagents were
used for this implementation.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass (focused suites; the full
local run limitation is documented above)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-20 19:58:53 -05:00
Nicky LeachandPaperclip 8b4ab65b1c Add plugin-owned project storage and task workspaces (#17001)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Tasks can use isolated repository workspaces.
> - Core currently prepares those repositories on its own filesystem.
> - A storage provider may only expose repositories inside remote agent
computers.
> - Project storage and task workspace preparation must have one
provider owner.
> - This pull request adds that contract and keeps execution as a
separate plugin interface.
> - Core keeps authorization, durable task bindings, and lifecycle
fences.

## Linked Issues or Issue Description

**Subsystem affected**

Plugin SDK, project workspace policy, heartbeat preparation, execution
leases, and workspace lifecycle.

**Problem or motivation**

Core cannot prepare a task workspace when its repository storage is
unavailable on the Core host. An execution lease must not be required
just to prepare persistent storage.

**Proposed solution**

Let one plugin provide project resource lifecycle and workspace prepare,
inspect, restore, and remove behavior. Core reserves a task workspace
before it calls the plugin. The plugin returns an opaque durable
reference. The matching execution plugin receives that reference on its
task RPC.

**Alternatives considered**

Preparing repositories on Core would require a provider mount on Core.
Preparing them only during task launch would tie persistent workspace
lifecycle to execution leases and agent availability.

**Roadmap alignment**

This extends the remote provider model in ROADMAP.md. Related execution
work is in #16978. This PR does not replace that task bridge. Native
execution of managed storage requires the bridge; this change fails
closed when it is absent.

## What Changed

- Add one storage provider declaration with supported modes/strategies,
a capability, a validated RPC contract, and a test harness.
- Persist provider ownership, repository revision, and
execution-workspace identity before external effects. Reconcile retries
with a stable operation ID.
- Prepare provider storage before environment acquisition. Keep Core
filesystem preparation out of this path.
- Pin the durable reference to the matching execution plugin and
validate the lease binding before task dispatch.
- Route inspection, reopen, and removal through the existing lifecycle
process. Keep local data when remote recovery is uncertain.
- Keep the application database pool free during lifecycle locks.
Preserve pending workspace selections, validate source edits before
retirement, and retry unfinished closed storage cleanup.
- Protect provider metadata and live repository sources from caller
edits. Storage edits retire only closed records with confirmed removal;
retired records cannot reopen.

## Verification

- Current head `8214b3ca5`: all 25 provider lifecycle tests pass with
`maxConnections=1`. They cover preparation, inspection, reopening,
removal, a paused provider with responsive ordinary SQL and a competing
source edit, pending selection preservation, rejected source edits,
cleanup retry scheduling, and providers that cache operation results,
and committed cleanup notifications for storage intent and recovered
state.
- Final frozen-tree lifecycle run on `8214b3ca5`: all 318 tests passed
in 10 files, covering workspace services, reopen, compaction, task
binding, project sources, heartbeat preparation, display caching, and
source locks.
- Direct server `tsc --noEmit` passes. The SDK build and all 128 SDK
tests passed during initial verification; later SDK changes are
documentation only.
- Full CI on the previous head `ec5c7209a` passed all 55 applicable
checks; 2 conditional checks skipped. Standard Greptile reviewed current
head `342e6d9c3` at 5/5 with no unresolved threads. All 55 applicable CI
checks passed on `342e6d9c3`; 2 conditional checks skipped. The Slack
browser and CLI startup jobs passed on their single unchanged-head
rerun. Its Apex review returned 4/5 with one pending-restoration issue.
Commit `1b58943b1` reconciles that durable intent before cleanup,
advances the generation without reopening the Core row, and blocks
direct removal or retirement while intent remains unresolved. Standard
Greptile reviewed `1b58943b1` at 5/5 with no new findings. All 54
applicable CI checks passed on `1b58943b1`; 3 conditional checks
skipped. The chat job passed on its single unchanged-head rerun. Apex
then returned 4/5 for a missing cleanup wake after recovery. Commit
`8214b3ca5` atomically registers cleanup intent before storage intent
and recovery-result writes. Its provider test observes real committed
notification hints and the visible advanced generation. Standard
Greptile reviewed `8214b3ca5` at 5/5 with no new findings. All 55
applicable current-head CI checks passed on the first run; 2 conditional
checks skipped. Final Apex verification completed at 5/5 on this exact
head: 38 files reviewed, no new comments, and no unresolved threads. The
PR is ready for review and mergeable.
- The first Apex review found five issues after a standard 5/5:
application-pool starvation, stale pending selections, retirement during
rejected source edits, lost cleanup retries, and reused inspection
identities. Commits `6d72e7fd4` and `342e6d9c3` fix each with regression
coverage. Archive lock waits use dedicated connections, and source edits
fail promptly if the lifecycle is busy. Retirement compares normalized
values. The normalized-source regression initially failed with the
raw-value comparison; after moving the check after normalization, a
clean provider-suite rerun passed all 24 tests at that stage. Those
threads are resolved; the earlier Apex 0/5 is not a passing acceptance
result.
- Earlier local integration attempts could not bind localhost inside the
sandbox. The same suites passed with permission to start local
PostgreSQL.
- The earlier broad local `pnpm test:run` overlapped edits and reported
stale-revision and checkout-path/Git-fixture failures. It was not a
final-tree result. Full CI subsequently passed; the original local
failure remains part of verification history.
- Local repository-wide typecheck/build cannot complete because `cargo`
is unavailable. Direct server TypeScript checks and affected tests pass;
full Rust and build validation comes from CI.
- An earlier browser run on `ff918c5a8` failed in the unchanged
case-filter journey: expected “Done,” received “All statuses,” with an
announcement handler recorded during the assertion. The cause is not
confirmed. [The failed
job](https://github.com/paperclipai/paperclip/actions/runs/39500611857/job/118896954508)
remains verification history. The unchanged shard passed in the next
full CI run on `ec5c7209a`; no UI or fixture change was made.
- Current-head browser shard 2 failed waiting five seconds for the
mocked Slack setup Success heading. This PR changes neither that UI nor
its fixture. [The failed
job](https://github.com/paperclipai/paperclip/actions/runs/39506070513/job/118916021232)
remains verification evidence. The cause is not confirmed; the single
unchanged-shard rerun passed; no UI or fixture change was made, and the
original cause remains unconfirmed.
- The workspace test shard passed its 3,978 general tests, then its CLI
company-import/export fixture timed out after 30 seconds waiting for
startup health before creating any company or workspace. [The failed
job](https://github.com/paperclipai/paperclip/actions/runs/39506070513/job/118916021855)
remains verification history. The child reached external-PostgreSQL
startup without exiting or reporting an exception. Its cause is not
confirmed; the single unchanged-job rerun passed, including the CLI
fixture. No startup or fixture change was made, and the original cause
remains unconfirmed.
- The new cached-removal regression initially failed because its fake
worker advertised availability for unrelated fixture plugins, so another
workspace changed its fake checkout state. Worker availability now
matches the fixture plugin; the complete 25-test provider suite passes.
- On `1b58943b1`, the chat shard timed out polling for one conversation
after an authorized GitHub description edit. [The failed
job](https://github.com/paperclipai/paperclip/actions/runs/39510521657/job/118930193418)
remains evidence. The exact case passes locally against PostgreSQL (1
passed, 1,380 unrelated cases skipped), and this PR changes neither that
test nor its handler. The original cause is unconfirmed; the single
unchanged-job CI rerun passed without a code or fixture change. The
original cause remains unconfirmed.
- The diff was checked for credentials, private references, and
generated artifacts.

## Risks

This is an additive provider contract with no database migration.
Existing projects keep their local behavior unless their policy selects
a storage plugin. A selected provider must be ready and enabled. Unknown
or unsafe cleanup fails closed.

Managed native execution depends on #16978. Core refuses a host Runner
fallback. Providers must fence lifecycle generations, preserve ambiguous
retries, and report remote recovery honestly. Provider-specific live
storage and guest mount qualification remain separate from these Core
contract tests.

## Model Used

OpenAI Codex (GPT-6), with repository inspection, code execution, and
tests. The exact model variant was not exposed.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either linked existing issues or described the issue in-PR
following the relevant issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links
- [x] My branch name describes the change and contains no internal
ticket id
- [x] I have run tests locally and they pass (affected suites; broad-run
limits are documented above)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-20 16:35:33 -07:00
Nicky LeachandPaperclip 2a5a323e57 Add execution-owned Runner launch preparation (#16997)
## Thinking Path

> - Paperclip manages work for AI agents.
> - Runner can execute in a different environment from Core.
> - Core owns provider selection, policy, and resource assignments.
> - The execution environment must prepare its own files and paths.
> - A shared contract must keep these responsibilities separate.
> - This PR adds that contract to the Runner execution driver.

## Linked Issues or Issue Description

**Problem or motivation**
Runner transport prepares provider files on the controller before
launch. An execution owner cannot prepare those files in its own
environment through the existing driver.

**Proposed solution**
Add `prepareLaunch` to the execution driver. Supply versioned Core
requirements. Accept a configuration ID, requirements digest, and
ordinary provider descriptor. Validate Core policy and assignments
before launch. Keep existing provider session checks.

**Alternatives considered**
Provider-specific ownership flags would spread the boundary across
backends. Shell preparation would expose process details in the plugin
API.

Refs #16993, #16977. Both prerequisites are merged. This PR now targets
master. Native plugin integration and execution-host preparation follow
separately.

PR #16978 contains an earlier, unmerged prototype. Its
`persistentAgentHome` mode and skill path-map call will be replaced by
this preparation contract before activation. This PR preserves current
master callers of the skill helper.

## What Changed

- Add the optional preparation callback and an explicit Runner artifact
identity.
- Keep the built-in preparation path as the default.
- Validate provider policy and resource assignment identity. Preserve
instruction text when resource locations change.
- Persist the attachment seed after an authority epoch rotation, so a
later controller restart can recover the same run.
- Preserve explicit context removal on a new run. Only an omitted
context can reuse the saved context. Remove its registered instruction
framing when context is removed.
- Save exact requirements and configurations in a private file outside
Runner commands. Retain the active record across failed attachments. Use
current grants for new runs. Keep incompatible session changes rejected.
- Join delayed preparation during startup and warm attachment cleanup.
Retain an unsettled checkpoint after a timeout. Prevent work after
cancellation.
- Use the supplied Runner artifact for interrupted handoff recovery.
Restore the exact target configuration at each handoff crash boundary.
Check the Runner state when the final ACK may be lost.
- Bind the changed shared sources to Copilot profile v51. Preserve the
v50 receipt and current integrity checks.

## Verification

- Workspace typecheck passed.
- All 487 affected Runner transport, control-plane, preparation store,
builder, policy, and profile tests passed on commit `eaf8ae8d1`.
- Workspace build and typecheck passed again on commit
`eaf8ae8d12c7ef2d22d226e4b3f05fdbf79ef4cb`.
- Both warm attachment cleanup regressions fail before the fix. They
pass after the fix. The tests cover delayed preparation, timeout
retention, and concurrent attachment rejection.
- The routed handoff regression fails with a missing controller binary
before the fix. It passes after the fix. The execution owner launches
the real fixture Runner.
- The 200,000-byte instruction regression fails before the fix and
passes after it. Four prepared handoff crash cases verify exact request
and configuration recovery. The store tests verify private file mode,
conflicting records, corrupt data, and active-run retention.
- A real Runner with a controlled fake provider verifies execution-host
paths, exact recovery, warm reuse, incompatible profile rejection, and
cancellation. It does not contact an external provider.
- The regression found undefined settings in strict PRP command hashing.
Requirements now contain only JSON values. The warm transition test
passes without changing PRP validation.
- The broader root suite on the prerequisite finished with 22,420
passing tests, seven failed tests in unchanged Git and diagnostic code,
and two suite setup errors because Cargo was absent from its PATH. This
PR does not claim a passing full root suite.
- The CI Build job passed compilation and production runtime boot, then
its runner received a shutdown signal during the clean public install
check. Other jobs reported lost communication with their self-hosted
runners. The failed jobs passed on retry on the same commit; successful
jobs kept their results.
- The current Superagent security scan is inconclusive because its
pinned merge-base checkout failed or timed out. GitHub rejected the
check rerun request through the available API. This is not a passing
security scan.
- Standard Greptile and Greptile Apex each returned 5/5 on `eaf8ae8d1`.
All review threads are resolved. CI passed on attempt 2. Current checks
have 55 successes, four optional skips, and the inconclusive security
scan described above. The branch is ready, mergeable, and current with
master.
- No live provider qualification or deployment was run.

## Risks

- A preparation owner must store configurations and keep retries bound
to the same task and requirements.
- Copilot source binding requires a new profile identity. This PR does
not claim fresh live qualification.
- The callback is an SDK extension. This PR does not connect it to a
plugin task process owner or add a Launcher endpoint.

## Model Used

- OpenAI Codex, GPT-6. Reasoning and repository tools. The exact serving
model identifier and context size are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-20 14:24:13 -07:00
Devin FoleyandPaperclip a2d26a83fe fix(inbox): keep automatic work out of Mine by default
Keep channel and routine attribution out of Mine unless the person participates directly, is assigned the task, or receives a current addressed request. Apply the same source rules to unread state, archives, and task notifications. Preserve direct comments and current human action requests.

Restore the two expressions damaged by redaction during the earlier master merge.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-20 13:46:10 -05:00
Nicky LeachandPaperclip dc6dd23ea4 Add plugin Runner preparation task contract (#16993)
## Thinking Path

> - Paperclip manages work for AI agents.
> - Environment plugins can own Runner tasks.
> - Core selects provider policy and runtime assignments.
> - The execution environment must resolve its own paths and
configuration.
> - The task API needs a preparation exchange before execution.
> - This PR adds that exchange under the existing lease authority.

## Linked Issues or Issue Description

**Problem or motivation**
The environment task API can start a Runner. It cannot return a prepared
provider configuration from Core requirements.

**Proposed solution**
Add a versioned `prepare` request and `prepared` result. Keep the
provider configuration bound to its task and requirements. Check the
same company, run, project, and retained-session authority as
submission.

**Alternatives considered**
A shell preparation command would expose execution details in the API.
Provider-specific ownership flags would spread this contract across
backends.

**Roadmap alignment**
This extends the existing plugin and remote execution APIs. It does not
add a separate execution system.

Refs #16977, #15406. The prerequisite #16977 is merged. This PR now
targets master. Runner transport and provider implementations follow
separately.

## What Changed

- Add strict launch requirements and prepared result schemas.
- Add the preparation capability version and saved configuration ID.
- Apply existing lease and resource checks to preparation.
- Document idempotency, cancellation, recovery, and cleanup
requirements.

## Verification

- `pnpm -r typecheck` passed.
- Plugin SDK build passed.
- All 55 Dot Runner and native Codex server integration tests passed
with Cargo available on PATH.
- All 18 environment task runtime tests passed. These include
preparation dispatch, inactive leases, wrong run identity, unauthorized
projects, result identity, and unknown command rejection.
- The broader root suite on the parent refactor finished with 22,420
passing tests, seven failed tests in unchanged Git and diagnostic code,
and two suite setup errors because Cargo was absent from its PATH. This
PR does not claim a passing full root suite.
- No live provider calls or deployment were run. 
- Standard Greptile and Apex each scored commit
`d3ac15906240b7066f5ff505ed2ffd9ef5dd43c1` 5/5. There are no unresolved
review threads.
- All 55 CI checks passed. Two optional checks were skipped. The branch
is ready and mergeable against master.
- A fresh master fetch and merge-base check passed immediately before
the Apex request.

## Risks

- This defines a new optional worker operation. Existing providers keep
their current operations.
- A provider must validate policy and resource bindings. Schema
validation alone does not validate a concrete provider descriptor.
- This PR defines the exchange. It does not connect native execution to
a preparation provider.

## Model Used

- OpenAI Codex, GPT-6. Reasoning and repository tools. The exact serving
model identifier and context size are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-20 11:41:49 -07:00
Nicky LeachandPaperclip 05f7079ecb Extract Runner provider launch preparation (#16977)
## Thinking Path

> - Paperclip manages work for AI agents.
> - Runner starts providers in local and remote environments.
> - Core selects the provider and task policy.
> - The execution environment supplies paths and installed files.
> - The transport currently combines these inputs in one large method.
> - This PR extracts provider descriptor construction before a separate
plugin preparation change.

## Linked Issues or Issue Description

**What existing behavior does this improve?**
Runner provider launch preparation.

**Current behavior**
The PRP transport constructs each provider descriptor inside startup.
This couples provider configuration to transport lifecycle code.

**Proposed behavior**
The transport calls one built-in descriptor builder. The builder takes
Core provider requirements and execution-environment locations as
separate inputs. File staging, provider validation logic, and session
rules keep their current behavior. The required Copilot source-identity
update changes profile admission metadata.

**Reason and benefit**
This gives launch preparation a separate unit of code. A later PR can
add plugin-owned preparation without adding ownership flags to each
provider backend.

Refs #15406, #16486. This replaces the earlier installed-home
implementation in this PR. #16978 remains a draft.

## What Changed

- Extract provider descriptor construction and its existing permission
helpers.
- Keep helper exports at their previous import path.
- Add focused tests for selection, permissions, locations, and managed
profile rejection.
- Update the Copilot source identity. Bind the extracted file and retain
the v49 history. The source attestation requires v50 after this move.
This changes the admitted profile identity even though no execution
behavior changes are intended.
- Document the boundary and its current limits.

## Verification

- 338 focused builder, transport, Codex security, and Copilot identity
tests passed on the rebased head.
- `pnpm -r typecheck` passed. `pnpm build` passed.
- The full root `pnpm test:run` on the pre-rebase head is still in
progress. It has reported five failures in unchanged server tests. One
isolated failure rejects the word `private` from this checkout's
`/private/tmp` stack path. The full root suite is not reported as
passing.
- All 56 CI checks passed on the rebased head. Four optional checks were
skipped. The branch is mergeable. Workspace typecheck and build passed
on this head.
- Standard Greptile and Apex each scored commit
`47f631883d8f417f6a818500ebe4e77e22cc70b8` 5/5. The rebase onto master
changed only Copilot identity metadata, history handling, and related
tests. `git range-diff` confirms that the launch-preparation
implementation is unchanged. The existing Apex result remains the review
evidence; it did not review the new commit hash.
- No live provider calls or Cloud deployment were run.

## Risks

- A moved field could change provider startup. Existing transport tests
and the new boundary tests check the projection.
- Copilot source binding requires a new identity after the move.
Existing artifacts and retained sessions must match the new admitted
profile. This PR does not claim fresh live qualification.
- This PR does not enable plugin-owned preparation. File materialization
remains in the existing SDK path.

## Model Used

- OpenAI Codex, GPT-6. Reasoning and repository tools. The exact serving
model identifier and context size are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-20 11:20:49 -07:00
DottaandPaperclip 505e1a5582 feat(cases): add persistent workflows with same-task agent handoffs (#16959)
## Thinking Path

> - Paperclip manages AI agents and their work.
> - An agent workflow needs persistent facts and a safe way to transfer
work.
> - Creating a task for each phase splits the objective, discussion,
workspace, and review policy.
> - A case can retain the facts while one primary task moves between
agents.
> - Transfers must survive process failure and preserve private access,
budgets, and completion gates.
> - This pull request adds durable case handoffs, native case tools, and
read-only case pages.
> - Prompts describe the workflow. Existing task controls decide when
work can run and finish.

## Linked Issues or Issue Description

**Problem or motivation**

Prompt-driven agent teams need a persistent record that can move through
triage, implementation, verification, and correction. Ordinary
reassignment does not provide a durable instruction, safe release
barrier, or recoverable delivery receipt for an agent handing off its
own running task.

**Proposed solution**

Extend standalone cases with one primary task, a descriptive phase,
retained access sources, and a handoff ledger. Apply assignments after
source execution and workspace settlement. Deliver each transfer through
the existing durable wake queue. Provide `create_case`, `read_case`,
`update_case`, and `handoff_case` in the native runner. Creation
requires kickoff and explicit workflow text. An explicit handoff to
`done` closes the case when normal task completion is accepted.

**Alternatives considered**

Do not add a workflow engine, filesystem queue, configured state graph,
or one task per phase. The workflow document combines transition prose
with an optional Mermaid `stateDiagram-v2` map. The server does not
execute the diagram. The Pipelines experiment removed on master stays
removed.

**Roadmap alignment**

This extends Agent Reviews and Approvals, Enforced Outcomes, Bounded Run
Recovery, and Activity Log attribution. Existing approval, review,
budget, privacy, workspace, and responsible-user rules remain
authoritative.

Related work: [ordinary handoff wake
recovery](https://github.com/paperclipai/paperclip/pull/15019). This
feature adds a separate persisted case-handoff receipt and release
barrier.

## What Changed

- Add case routing fields, retained access sources, durable handoff
history, delivery leases, and replay-safe migrations.
- Keep the same primary task across agent phases. Preserve each
returning agent's own session and the task's workspace.
- Fence outgoing mutations, wait for provider and workspace release, and
recover delivery without duplicate task comments or runs. Recheck
current assignment permissions as the original caller before applying a
delayed transfer. Scope a run Stop to that run’s own handoff intents, so
repeated old Stop requests preserve newer work. Cancelling terminal
intent without a source run also requires fenced current task ownership,
including native retries and preparation with an old checkout. For Cloud
callers, revalidate current stack membership with an uncached Cloud RPC
and derive owner elevation from the current managed setting.
- Keep case reads, documents, assets, Audit, and live events inside
retained task/project permissions.
- Add native case creation/read/update/handoff tools. Store required
workflow text and initial documents on the first task. Page oversized
case facts and referenced document bodies through the dedicated tool
with bounded UTF-8 JSON, current routing versions, snapshot conflicts,
and current source authorization on every page.
- Add read-only case lists and detail pages, task-style list controls,
compact dotted field tables, linked handoff tasks, and case filters in
Audit.
- Add native/legacy integration tests, migration/restart tests, browser
coverage, and bounded live receipt fixtures. Extend the trusted sandbox
condition to cover the new subscription fixture profile.
- Hide obsolete paused-agent warnings on completed or cancelled task
threads.
- Synchronize the company-switch settings test with React effects after
a CI failure. Preserve its security assertions and production remount
behavior.

## Verification

The branch directly includes master `9ef434fe79`. The required `ci /
verify` and `ci / e2e` gates pass on head `765fccd67c`. [Current-head
CI](https://github.com/paperclipai/paperclip/actions/runs/39464348614)
passes typecheck, build, tests, and all eight browser shards. Security
checks pass. [Greptile gives this exact head
5/5](https://github.com/paperclipai/paperclip/pull/16959#issuecomment-6291156549),
with no unresolved review threads. The optional Paperclip Review check
remains queued because its assigned agent is paused. It is not a
required branch check. No check result was overridden.

Local workspace typecheck and build pass after the master merge, along
with database migration checks, token gates, map checks, Storybook
catalog checks, and the Copilot profile identity check. Standard builds
refresh Runner vendor output. Focused checks pass 2,008
API/paging/context tests and 7 strict case protocol tests. The final
commit changes one test fixture only; its ten tests, UI typecheck, and
token gates pass. No production source changed in that commit.

On current head `765fccd67c`, all **194 critical workflow tests**
executed and passed with no skipped tests in those files:

- 38 Stop/ownership tests, including board completion intent, native
retries, stale Stop, and preparation with an old checkout.
- 2 actual legacy process/HTTP handoff tests, including scratch failure,
a closed-stdio child that continues writing, and recovery through a
fresh worker after the process group stops.
- 5 migration tests, including SQL column metadata, preserved null
authority context, and all six prior-numbering receipts.
- 3 process-settlement and 5 scratch tests.
- 88 handoff-service, 18 heartbeat handoff, and 21 native case-tool
integration tests.
- 7 bounded case/document-read projection tests and 7 strict
protocol-contract tests.

The current CI checkout was `fed65d49`, merging `765fccd67c` into master
`9ef434fe79`. Its new document regressions reconstruct exact
Unicode/escaped bodies and revisions through real native authority and
authenticated HTTP with generic API tools disabled. They cover
case-owned, primary-task, and linked-task documents; routing on every
page; stale document snapshots; access loss and unlinking;
unrelated/foreign/private sources; system documents; and quarantined
content. Active-task document tools retain their existing behavior.
These are current-head test results from the first CI attempt; the
browser-only retry did not rerun these suites.

The full `64fdd3403f` CI failed one separate settings test: after a
company switch, it observed an unsettled API-key draft. The production
component and test were unchanged from prior green source. Production
switches remount both keyed settings layers; the test directly reused an
unkeyed view and used a timer tick instead of waiting for React effects.
The final commit replaces that fixture synchronization with React `act`.
The exact secret-clearing assertions and all timeouts remain unchanged.
The original assertion failure remains recorded; no unchanged retry was
used. The narrow unchanged baseline and fixed fixture each pass 10
tests.

The upstream result-paging merge preserves case capture namespaces and
current asset privacy. Its API integration suite executed 39 of 41 tests
successfully, with two skipped; the optional assigned-result PRP
integration test was skipped. Neither skipped suite is counted in the
194 critical tests or as live provider proof.

All 361 upstream migration entries and SQL bodies remain unchanged. Six
case migrations follow master as 0363–0368 with identical SQL hashes.
Official Drizzle generators produced the combined metadata and five
retained snapshots. Generation reports no schema changes, and the
snapshot drift test passes. The earlier `ce361ae5d0` CI passed on
attempt 1, including its then-current 179 critical tests. Fresh review
later identified unusable document references with generic API tools
disabled; the bounded document reads and ten additional authenticated
HTTP tests address that finding.

The full local `pnpm test:run` attempt was cancelled after this Mac
exhausted PostgreSQL semaphore capacity; it is **not** counted as a
pass. Later database attempts also stopped before assertions or skipped,
including one sandbox socket denial. Two original stale-Stop regressions
did reproduce the bug against the old source. A REST serialization
assertion passed after two preserved database-startup failures. No test
timeout was increased. All 194 assertions listed above executed and
passed in current-head CI. The complete 385-file, 3,963-test UI shard
also passed after the fixture repair.

A configured-provider receipt workflow passed 13 backend checks across
triage → implementation → verification → correction → done, using one
task and four work runs. The saved receipt is revision 2 with total 6
USD; case and task both closed. The original canonical attempt remains
failed because its browser assertion confused the terminal destination
with completed-task tooltips. The corrected full browser verifier passed
on the same retained database and original runs, with no additional
provider calls. The last clean-build browser readback is on
`6a86c54a53`; later changes affect recovery, authorization, bounded
reads, and settlement. Accounted work cost is a $1.010574 rate-card
estimate; provider billing and setup-probe usage are unavailable.

Copilot profile 49 passed the unchanged seven-fixture private protocol
pack (46/46 checks, no retries) and the product file-edit canary after
master's completion-replay change. All 60 bound implementation hashes
remain unchanged on the current source. Historical profile-47/48
identities and results remain intact. See the [profile-49 compatibility
record](https://github.com/paperclipai/paperclip/blob/codex/persistent-case-handoffs/doc/plans/2026-10-20-copilot-completion-recovery-compatibility-v49.json).
This is bounded compatibility evidence, not a fresh full matrix,
installed-package product test, or Daytona rollout.

Preserved CI failures and retries:

- On `20662930ac`, Slack managed setup failed a five-second success
assertion after reload. Its test/application path was unchanged from a
prior green head. One unchanged-source retry passed all 25 tests in that
shard; no source or timeout changed.
- On `9402b4f17a`, two CI workers received shutdown signals at 15:24:19
UTC. Neither log had an assertion failure before interruption. One
unchanged-source retry of each passed all Runner static checks and all
32 tests in browser shard 6; both aggregates passed. The next head,
`7b4374edaf`, passed all CI without retries.
- On `295f289b5a`, serialized shard 9 timed out during its first
device-login test, then the next test found an active login lease.
Direct login/test paths were unchanged from a prior green head. Cold
import plus a timed-out async body using the next test's mutable
actor/store is the supported fixture-race explanation; no request trace
proves that sequence. The original failure remains recorded. One
unchanged-source retry passed all 294 tests in 19 files, including all
41 device-login tests. No login source or timeout changed. The
subsequent `ce361ae5d0` CI passed without retries.
- On `64fdd3403f`, one company-switch settings assertion observed an
unsettled draft. The final test-only commit uses React `act` without
changing assertions, timeouts, or production code. On `765fccd67c`, all
ten settings tests and the complete 385-file, 3,963-test UI shard
passed.
- On `765fccd67c`, browser shard 3 completed the split-handoff
assertions, then cleanup received HTTP 500 from run cancellation after a
one-second PostgreSQL row-lock timeout. The extra chat run was reporting
completed work while teardown began. Cleanup stopped before restoring a
global experiment flag, causing a later assertion to fail. Relevant
production and test paths are unchanged from an earlier green commit.
Stop's lock order is consistent, and no nested self-lock was found; the
exact PostgreSQL blocker was not recorded. One unchanged-shard retry
passed. The original failure, trace, and downstream flag failure remain
recorded. No Stop implementation, cleanup assertion, or timeout changed.
The retry supports intermittent cleanup contention; it does not identify
the original blocking transaction.


## Risks

- Local process transfers require host-owned PID/group absence. Missing
or uncertain termination evidence keeps delivery pending, independently
of scratch setup.
- Handoff admission and task cancellation share execution ownership. New
regression tests cover temporary holds, late source writes, and
uncertain provider termination.
- Retained private sources use an intersection of existing permissions.
This intentionally fails closed when a source is missing or an existing
task cannot preserve that boundary.
- Migrations add tables and indexes. They preserve master history and
can replay over prior feature installs. Migration 0368 adds nullable
internal authorization provenance with no default or authority backfill.
Historical transfers still awaiting release without this context fail
closed; an operator must cancel them and request a new handoff.
- Delayed Cloud handoffs depend on the current Cloud membership RPC. An
unavailable, ambiguous, expired, or mismatched response holds the
handoff for retry; it does not reuse cached authority or grant access.
- Bounded reads reload and reauthorize the selected projection per page.
Underlying work grows with the data size and number of pages. Changed
data or routing requires restarting from offset zero without the old
snapshot.
- Phase names and workflow diagrams remain advisory. They do not satisfy
review or approval gates.
- This is a large, cross-cutting PR. The maintainer requested one PR for
the whole feature; the commits separate data, runtime, UI, and
qualification work.

## Model Used

OpenAI Codex, GPT-6 family, with tool use, code execution, and delegated
code review. The exact deployment model ID and context-window size were
not exposed in the session. Live fixture agents used the explicitly
configured provider model recorded in their test evidence.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-20 12:46:14 -05:00
DottaandPaperclip 2c96f76780 feat(connections): add model-backed prompt injection prevention
Add opt-in OpenRouter checks at existing tool-result boundaries with regex fallback, service accounting, and settings on Connections. Make migration 0362 safe to replay over existing or partially applied schema state.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-20 11:32:25 -05:00
Nicky LeachandPaperclip 33cc567f75 Add lease-scoped Runner task hooks to environment plugins (#15406)
## Thinking Path

> - Paperclip coordinates AI agents and their runs.
> - Environment plugins own remote capacity.
> - A plugin needs a typed API to start and stop its installed Runner.
> - Core must derive authority from the saved lease.
> - A lost reply or controller restart must not lose cleanup authority.
> - This PR adds the worker contract and the host task service.
> - Native execution and Runner changes are separate PRs.

## Linked Issues or Issue Description

**Subsystem affected**

Plugin SDK and environment lease services.

**Current behavior**

Environment plugins have no typed Runner task hook. Core cannot dispatch
these tasks or recover their credential handoff through a saved lease.

**Proposed behavior**

Add validated task operations, worker negotiation, company and project
checks, retained-session authorization, and durable cleanup. Keep
credentials out of lease metadata.

**Additional context**

This PR is the first part of a smaller series. Runner installed-home
support is in #16977. Native execution and setup are in #16978. Both are
stacked drafts. This PR does not enable native plugin execution, change
default environments, add a route, or add a database migration.

## What Changed

- Add `supportsTasks` and `onEnvironmentTask` with seven typed
operations.
- Validate worker requests and responses. Reject shell commands and file
transfer operations.
- Pin dispatch and cleanup to the saved company, lease, plugin, and
driver.
- Authorize projects and retained sessions. Validate the current run
separately from the retained PRP identity.
- Save dispatch before the provider call. Fence admission during
cleanup. Require observed process termination.
- Save account writeback authority on the lease. Recover Codex refreshes
through the existing account and secret services.
- Document the task API. Keep the Runner, heartbeat, setup, workspace,
and provider changes in later PRs.

## Verification

- Full `pnpm -r typecheck` and `pnpm build` passed on the separated API
scope.
- 201 focused tests passed: SDK worker dispatch, task validation,
PostgreSQL task lineage, credential recovery, and existing environment
cleanup.
- The lineage test covers a third run, repeated same-run replacements, a
stale submitting run, and exact termination receipts.
- Initial commands hit sandbox socket/IPC restrictions. The permitted
runs executed PostgreSQL and passed. A typecheck attempt lacked Cargo in
PATH; the run with the installed toolchain passed.
- The earlier combined implementation had a full local run with 22,286
passing tests, 120 skips, and eight failed assertions. Task fixture
failures were fixed before this split. Remaining host Git and
temporary-path assertions are recorded in the previous PR revision. This
split does not claim a fresh full local suite pass.
- The standard Greptile review scored this API head 5/5 with no
unresolved threads. CI is green. The single Apex review also scored this
head 5/5 with no actionable findings.
- Fresh API CI lost a self-hosted runner during server shard 9. GitHub
reported lost communication, with no failed test step. The affected jobs
passed on retry without code changes.
- CI on the prior combined head failed an unchanged workspace dev-server
readiness case. No unrelated test fix is included here. Fresh CI is
required for this smaller head.
- This scope does not run a provider or a Cloud test. The user owns
deployment and the intermediate Cloud test.

## Risks

- The API is opt-in. Native plugin execution requires the later
integrations.
- Providers must make task submission idempotent and prove descendant
termination.
- A failed status read or credential export keeps the lease available
for cleanup.
- Codex refresh writeback requires the same active grant, secret
reference, and session epoch. Revocation or account replacement discards
the old refresh.

## Model Used

OpenAI GPT-6 through Codex. Used source inspection, code execution,
tests, and GitHub tools. The exact served model ID and context-window
size are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run local checks and recorded failures and their results
above
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-20 09:14:23 -07:00
DottaandPaperclip 4b05795712 fix(github): reuse review instructions across native turns (#16971)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - GitHub events continue an ordinary task and can reuse its provider
conversation.
> - Each automatic event appended the full review policy and PR
description.
> - Native GitHub follow-ups also repeated task history because only
Slack used the compact path.
> - This pull request separates admitted review configuration from
commit updates.
> - A verified resume sends the current messages and changed
configuration. A fresh session gets full context.
> - This reduces repeated input while retaining review rules and current
tool checks.

## Linked Issues or Issue Description

Refs #13959, #16645, #16901.

**What happened?**

Opening a PR and pushing twice stored three full review prompts. A later
native turn repeated all three in a retained provider conversation.

**Expected behavior**

A new event supplies its commit and event data. The harness delivers
stable review instructions once per retained conversation and
configuration. Fresh sessions receive full instructions.

**Steps to reproduce**

1. Enable automatic GitHub reviews for a repository.
2. Open a PR, let the review finish, and push two new commits.
3. Inspect task messages and the native submitted envelopes. Before this
fix, the policy and old requests repeat.

## What Changed

- Store compact automatic event messages. Fetch the PR description
through the existing metadata tool when needed.
- Load review instructions from processed deliveries bound to the
company, task, agent, and source comments. Preserve each admitted policy
snapshot.
- Use the existing verified native continuation path for complete GitHub
text batches. Deliver configuration changes using a key over endpoint,
PR conversation, revision, and instructions.
- Keep full bootstrap input for fresh sessions and failed resume,
including board follow-ups with no new GitHub event. Retain existing
framing for incomplete batches, attachments, interactions, and recovery.
- Keep the same configuration identity across automatic review,
discussion, and automatic review. Coalesced requests use the last
accepted request's admitted policy.
- Add regression and database coverage. Update the execution contract
and verification recipe.

## Verification

- Red: the new event-size regression failed because policy and PR body
repeated. The GitHub continuation regression failed because it returned
no compact prompt.
- Green: focused policy, continuation, native input, and adapter prompt
tests passed (231 tests). Native resume/fresh-bootstrap cases passed (9
tests).
- The signed-webhook/database case passed at `6296168253`. It checks
configuration edits, queued older snapshots, coalesced policy selection,
discussion continuity, board follow-ups, and company/task/agent/comment
boundaries. The private PostgreSQL template used 12 connections because
the host reached its semaphore limit with the default settings.
- The earlier broad channel/session integration run passed 1,432 tests.
Later review fixes invalidated that run. The latest focused database
case passed after those fixes.
- Reviewer regressions failed against the previous lookup, then passed
with the fix: a mixed-revision batch delivered multiple policies, and a
discussion lost the configuration identity. The board
wake-to-rendered-prompt regression also failed before repair.
- `pnpm -r typecheck`, `pnpm build`, `node scripts/check-maps.mjs`, and
`git diff --check` passed on the final source.
- Full local `pnpm test:run` exposed follow-up/fixture failures during
development. Those cases are fixed and pass separately. The stale run
was stopped after source edits. Full-suite validation for the final
commit passed in CI.
- All required CI checks passed for `6296168253`, including tests,
typechecks, build, and clean public npm install checks. The two
unrelated Storybook checks were skipped.
- A live two-turn Codex smoke could not start: the local macOS sandbox
helper rejected execution of the installed Codex 0.153.4 binary. No live
GitHub/provider acceptance or deployment is claimed.

## Risks

Skipping instructions is safe only after a verified checkpoint resume
with the correct previous run. The full bootstrap remains available if
resume fails. Changed or previously unknown configuration is sent again.
Tests cover these cases. Tool authorization and publication checks still
run under the current server policy. No database migration is required.

## Model Used

OpenAI GPT-6 through Codex, with tool use and code execution. The exact
deployment model identifier and context window are not exposed in this
session. No delegated agents were used.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-20 10:39:17 -05:00
Nicky Leach 34be1b831b Fix duplicate ACPX skills cleanup in test teardown (#16937) 2026-10-20 07:44:28 -07:00
DottaandPaperclip 813e808af4 Remove filesystem history authorization from workspace preparation (#16963)
Remove physical-root source/reader authorization and sticky directory classifications from workspace preparation. Preserve current task/run authority, app-record privacy, credential authorization, containment, and lifecycle/publication integrity.

Validate replacement selections against persisted new inputs and refresh verified checkout ownership so bounded reuse survives earlier workspace relocation. Add real PostgreSQL/Git regressions, a reproducible history-scaling benchmark, and documentation.

Full CI passed all 48 jobs and Greptile scored 5/5 at 3d5da6c259. Five preparation-guard medians improved from 20,512.99 ms to 52.22 ms on the 8,500-workspace fixture; these are not end-to-end startup timings.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-20 09:19:59 -05:00
DottaandPaperclip d84061b923 fix(runner): recover journaled completion proposals (#16962)
## Thinking Path

> - Paperclip manages AI agents and their work.
> - Native runs preserve provider sessions across controller restarts.
> - A completion event can reach durable storage before the next session
checkpoint.
> - Recovery advanced the event cursor but lost the saved completion
proposal.
> - The completed turn then appeared to need another provider turn to
report its result.
> - This change restores the exact active turn's proposal before
advancing the cursor.
> - Recovery can finalize completed work without repeating its external
actions.

## Linked Issues or Issue Description

**What happened?**

After a controller restart, a native run could fail with
`native_finalization_missing` even though `run.result.proposed` was
already durable. The recovered driver skipped that event when its cursor
advanced, so the result was absent from its state. Automatic disposition
retries could then encounter outstanding tool receipts and exhaust
recovery.

**Expected behavior**

Restore the saved result for the exact active turn. Wait for provider
termination, then use normal finalization. Do not start another provider
turn to repeat completed work.

**Steps to reproduce**

1. Start a native Codex task and save its active-turn checkpoint.
2. Persist its completion proposal, then lose the controller before
another checkpoint.
3. Recover the same run after the provider completes. Before this
change, finalization reports a missing result.

**Paperclip version or commit**

Reproduced on `92b238137b`. The repair is based on `7c247243e5`.

**Deployment mode**

Native Runner with Codex. The incident used a remote sandbox; the
regression covers controller event recovery.

Related: #12845 and #15297. The older #12241 addresses provider process
continuity; this change repairs the controller's saved event projection.

## What Changed

- Restore valid completion proposals for the checkpoint's exact active
turn during event replay.
- Reject conflicting, invalid, or incorrectly bound proposals. Ignore
proposals from another turn and prevent adoption after a newer turn
starts.
- Keep provider termination and normal finalization as separate
requirements.
- Add eight behavioral cases using the real Codex driver and a simulated
transport, and document the recovery contract and verification scope.

## Verification

- Red: the new restart regression failed with
`native_finalization_missing` before the production change.
- Green: 254 tests passed across the native runtime, backend adapter,
and Codex recovery suites. The new cases check no repeated provider
work, no early finalization, duplicate proposals, conflicts, invalid
proposals, and stale turn/session bindings.
- `node scripts/check-maps.mjs` and `git diff --check` passed.
- `pnpm -r typecheck` and `pnpm build` passed locally. All CI gates
passed on `2ac025a15c`; Greptile rated that commit 5/5 with no
outstanding findings. The full local `pnpm test:run` was started after
completing the embedded PostgreSQL installation, then stopped while
still running once the complete CI test matrix passed; it is not
reported as a completed local run.
- Real local acceptance passed on `2ac025a15c` with the production Rust
Runner transport, Codex CLI `0.160.0`, and `gpt-6.1-sol` on macOS arm64.
Persisted the completion proposal while retaining the older active-turn
checkpoint; let the provider finish without persisting its later
controller events; stopped the exact owned runner/provider; recovered
the same provider session and turn. Observed one accepted result, one
durable `turn.start` command, and one line in the receipt file. Hosted
sandbox restart and recovery of the original stopped task have not been
performed.
- Initial setup failures are retained: dependency drift caused
diff-viewer type errors, and skipped PostgreSQL postinstall links
prevented database startup. Dependency alignment and the package
postinstall repaired those local prerequisites. Probe setup iterations
failed on a direct-provider response schema, invalid probe input fields,
and an original provider that still held its writer lock. Acceptance
uses the production transport, validated input, and exact-owner
shutdown. No production code changes were made for those probe setup
failures.

## Risks

- A stale proposal could finalize the wrong work. Recovery requires the
checkpoint's active turn and matching run, session, and source. It
rejects conflicting results and waits for provider termination.
- The change uses the existing paginated recovery scan. It adds no
database query per event or new retry allowance.
- No schema migration or change to task authorization is included.

## Model Used

OpenAI GPT-6, running as Codex with reasoning, tool use, and code
execution. The exact served model snapshot and context-window size are
not exposed in this session. The live acceptance probe uses
`gpt-6.1-sol`.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-20 09:09:22 -05:00
628993fc59 fix(runner): name the tool receipts that block the next provider turn (#16961)
When a resumed run cannot start a turn because the semantic tool bridge
still holds pending or unsettled completed receipts, the error now names
each blocking receipt by operation and call ID (bounded to four per set).
Tool input and result content stay inside the bridge. Adds an integration
test covering the four-receipt limit and the trailing "...".

Co-Authored-By: Paperclip <Paperclip-Paperclip@users.noreply.github.com>
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
2026-10-20 06:49:17 -07:00
DottaandPaperclip 96824a71d1 fix(db): migrate connector hooks on SQL_ASCII databases (#16958)
## Thinking Path

> - Paperclip manages work for AI agents.
> - Server startup applies database migrations before accepting work.
> - Some older embedded databases use SQL_ASCII encoding.
> - Migration 0355 uses a Unicode escape literal that PostgreSQL rejects
on those databases.
> - A source rebuild can pass but the updated server cannot start.
> - This change makes that migration portable and preserves its shipped
receipt.
> - Existing databases retain their newer connector triggers during
upgrades.

## Linked Issues or Issue Description

**What happened?**

A source deployment failed at startup with `conversion between UTF8 and
SQL_ASCII is not supported`. Migration 0355 could not compile its
connector policy function on an older embedded database. The previous
app was restored while this repair was prepared.

**Expected behavior**

Supported legacy databases complete startup migrations. Connector
selector trimming matches JavaScript `trim()`. A database that already
applied 0355 must not replay it over the later 0356 connector trigger
definition.

**Steps to reproduce**

Create a PostgreSQL database from template0 with SQL_ASCII encoding,
then apply the current migration chain. The new regression fails with
the observed conversion error before this change.

**Paperclip version or commit**

Reproduced on `92b238137ba716cdf1746dd49969e2f5ab7af8fe`. The branch
includes current master `f57ed25385`.

**Database mode**

Embedded PostgreSQL 18.1; legacy SQL_ASCII database. The UTF-8 path is
also covered.

Related background: #645 fixed encoding for new databases. Existing
SQL_ASCII installations still need portable migrations. #16956 fixes a
separate workspace lock timeout that motivated this deployment.

## What Changed

- Build the whitespace pattern from UTF-8 bytes instead of a Unicode
escape literal.
- Match whole whitespace sequences so SQL_ASCII does not trim partial
multibyte characters.
- Recognize the original 0355 checksum as a valid receipt. This prevents
replay of its older trigger body over 0356.
- Add real PostgreSQL coverage for both encodings, selector behavior,
and preservation of the later trigger definition and receipt count.
- Document the legacy encoding and migration-history contract.

## Verification

- Red: SQL_ASCII migration failed with the same conversion error; UTF-8
passed.
- Second red: fixing only the SQL caused an existing receipt to replay
and overwrite the later connector function.
- Green: 29 focused tests passed across the new regression, migration
replay tests, and database client tests.
- Rebased regression: all 29 focused tests passed.
- `pnpm -r typecheck`, `pnpm build`, and `pnpm --filter @paperclipai/db
check:migrations` passed.
- Linux ARM64: clean build and 37 focused tests passed, including both
encoding and workspace-lock regressions.
- Live acceptance: the same legacy SQL_ASCII database completed all
seven remaining migrations. The server reports the tested commit and
healthy status. The restart report has no lost runs.
- All 55 current-head checks passed; two unrelated Storybook checks were
skipped. Full test, typecheck, build, runner, release, and E2E CI gates
passed. The complete suite ran in CI; local verification used focused
tests.
- Greptile reviewed this exact commit at 5/5 with no findings.
- Preserved failures: the initial unmodified-master startup failed at
migration 0355 and was rolled back. A later build-cache path error in
the deployment commands was corrected before the successful clean build;
it required no source change.

## Risks

The migration content changes, so receipt compatibility matters. The
original checksum remains recognized to avoid replaying historical DDL.
The tests compare complete later function definitions and receipt
counts. The whitespace pattern contains encoded bytes; tests cover every
ECMAScript whitespace character and preserve non-whitespace Unicode
input. Database data and schema shape are unchanged by this repair.

## Model Used

OpenAI GPT-6 through Codex, with repository tools, code execution, and
browser verification. The exact served model variant and context window
are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-20 07:56:32 -05:00
DottaandPaperclip 92b238137b Connect and configure GitHub Copilot through Apps (#15705)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Apps and AI Connections store credentials and govern access to agent
runtimes.
> - Users need a supported saved-token connection and config values that
survive save and reopen.
> - The release must preserve saved-token access and task lifecycle
guarantees.
> - This pull request will connect Copilot through the normal Apps and
AI Connections path.
> - The benefit is a reviewable part of the Copilot production release.

## Linked Issues or Issue Description

Refs #15701 and #15703. Supersedes setup work in #15562. Base: #15703.
Next: #15706.

## What Changed

- Require configuration update authority before Copilot
credential-bearing model discovery; default to the saved environment and
preserve explicit selection for editors.

- Keep Copilot discovery passive during reconnect reconciliation;
refresh on explicit opening, account/environment changes and reconnect.

- Add GitHub AI token connections with encrypted storage, ownership,
grants and audit logging.
- Keep repository access separate from Copilot runtime authentication.
- Probe the selected environment without sending a model prompt and
preserve authenticated model selection through save/reopen.
- Keep fresh execution admission consistent with normal Copilot setup;
persist task model choices without changing provider or permission
policy.
- Refresh authenticated models after reconnecting the same saved Copilot
account, including recovery from a previous authentication error.
- Apply the additive provider-default constraint migration through the
normal generated migration workflow.

## Verification

Runtime #15701 is merged at `d855e550ad8d2a267312983f26457aabf5393c3a`.
History #15703 is merged at `df80616d98119cbf5abd40549794d9980a5fabf6`.
Remaining source
[`42bcbd61299655f7e37aabe6bb5f19bba770ad1d`](https://github.com/paperclipai/paperclip/commit/42bcbd61299655f7e37aabe6bb5f19bba770ad1d)
contains the four-file authorization repair. The remaining PR trees
preserve six nonoverlapping files from the newer public mainline
managed-settings fix and the CI-owned lockfile. No unrelated provider is
enabled.

The security finding is repaired: existing-agent discovery requires
`agent_config:update` before connection selection or token resolution.
The saved environment is the default. Authorized editors can select a
prospective environment. Both denied board-viewer and agent-reader
regressions fail on the original source. All49 route tests and server
typecheck pass with the fix. Denied requests perform no connection
selection, credential resolution or probe. Current-head security scans
pass on both remaining PRs; the repaired thread is resolved.

Copilot CLI1.0.88 and profile47 retain digest
`sha256:55044aa235e88b3fe36ec8a556ee1e3382590870aab907e4462ef7d64af49cea`.
The [qualification
record](https://github.com/paperclipai/paperclip/blob/42bcbd61299655f7e37aabe6bb5f19bba770ad1d/doc/plans/2026-10-20-copilot-qualification-v47.json)
reports20/20 Product cells,154 assertions and7/7 protocol cases,46
assertions against frozen normal installed source
`c2616370800f5f6df45246b0890ba35a7cd2faab`. The exact qualification
model is `gpt-5.6-luna`. Every passing Product case confirms cleanup.
Original failures remain recorded; automatic behavior retries are
disabled. The route-only authorization repair changes no bound
runtime/profile bytes and does not relabel the frozen campaign.

The ordinary installed remote journey passed saved-token selection,
model discovery, normal UI save/reopen, metadata-only Test, completed
task, accepted receipt and exact19-byte browser download. An open model
catalog caused no additional discovery requests during117seconds. Actual
installed runtime smokes passed on macOS ARM64, macOS x64 under Rosetta
and native Linux x64 on Daytona. Raw token browser entry was not
exercised; encrypted connection creation used the normal API.

The first Daytona file attempt timed out during delayed semantic
dispatch; its precise stalled layer remains unresolved. Independent
ordinary remote delivery and the other19 Product cells passed before one
instrumented recheck passed8/8 with unchanged source,prompt,assertions
and deadlines. No causal latency repair is claimed.

Before the authorization repair, all four final PR heads passed required
verify/E2E and fresh Greptile5/5 reviews with zero unresolved threads.
Current-head CI/review is running for the two repaired heads. Local
focused checks retain129 connection,59 runner,72 shared-eval and88
recovery/workspace passes, plus migration safety and token gates. The
additive Copilot migration is361; released master history is preserved.

[Cloud normal-package
run39414239704](https://github.com/paperclipai/paperclip/actions/runs/39414239704)
builds the pre-security source4f3f. All four native producers and Linux
package assembly pass; the final clean installed consumers are
finishing. All18 retained archives match their hashes;37,863 regular
files contain zero selected credentials. That package does not contain
the later route repair. The actual final published package must include
it and pass the local/Daytona live canaries. The frozen Daytona image
remains published and independently verified. No separate full-image
scan is claimed. Docker builds run in the cloud.

**Remaining:** current-head CI/review, setup and qualification merges,
final publication, and ordinary local/Daytona canaries against the
actual shipped package. The user explicitly authorizes the maintainer
review override; CI remains a merge gate. No production deployment is
claimed. Provider USD remains unknown and GitHub-attributed.

## Risks

Bad credentials, missing entitlement, runtime installation and
unavailable models must remain distinct failures. A connection must not
adopt ambient credentials. The constraint migration changes accepted
provider values, with no credential-storage migration.

Current-master NewAgent fixture extraction is retained. Copilot cases
use that shared support and test both passive discovery and explicit
reconnect under the same setup lifecycle.

The onboarding retry regression shares the component suite’s
saved-connection, authenticated-model, draft, agent-list, hire and
render lifecycle fixtures. Keeping it beside the existing onboarding
failures makes adoption versus duplicate hire observable under the same
lifecycle; this is the concrete cohesion reason for the existing large
test file.

## Model Used

OpenAI Codex, based on GPT-6. The exact serving model ID and context
window are not exposed in this task. Used for code changes, review and
tool-assisted verification.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-20 07:02:22 -05:00
DottaandPaperclip df80616d98 Preserve Copilot historical runtime attestations (#15703)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Runner recovery must distinguish old profile identities from the
current launch identity.
> - The long integration produced historical attestations that must
remain inspectable after consolidation.
> - The release must preserve saved-token access and task lifecycle
guarantees.
> - This pull request will retain the historical Copilot profile records
without granting old profiles launch access.
> - The benefit is a reviewable part of the Copilot production release.

## Linked Issues or Issue Description

Refs #15701. Supersedes the provenance work in #15561. Base: #15701.
Next: #15705.

## What Changed

- Retain historical Copilot profile attestations as separate immutable
records.
- Preserve the mainline and candidate histories when version numbers
overlap.
- Keep exact current-profile launch checks in the runtime PR.

## Verification

Final reviewed source
[`4f3f1af807d2ed21adabb04c2f27f4df9c4bc8d5`](https://github.com/paperclipai/paperclip/commit/4f3f1af807d2ed21adabb04c2f27f4df9c4bc8d5)
includes master `cde944ed75648adfb569e86133adc8b118b55dd6`. The combined
four-part PR tree matches it except for the CI-owned lockfile. Every
prior public PR head remains an ancestor. Released master migrations
remain unchanged; Copilot adds migration361. No unrelated provider is
enabled.

Copilot CLI1.0.88 and profile47 retain digest
`sha256:55044aa235e88b3fe36ec8a556ee1e3382590870aab907e4462ef7d64af49cea`.
The pending qualification marker is removed. The [qualification
record](https://github.com/paperclipai/paperclip/blob/4f3f1af807d2ed21adabb04c2f27f4df9c4bc8d5/doc/plans/2026-10-20-copilot-qualification-v47.json)
reports **20/20 Product cells,154 assertions;7/7 protocol cases,46
assertions** against frozen installed application
`c2616370800f5f6df45246b0890ba35a7cd2faab`. Both environments use the
exact authenticated model `gpt-5.6-luna`. Every passing Product case
confirms cleanup. Automatic behavior retries are disabled. Original
failed attempts remain recorded.

The ordinary installed remote journey passed saved-token selection,
authenticated model discovery, normal UI save/reopen, metadata-only
Test, task completion, accepted receipt and an exact19-byte browser
download. An open model catalog caused no new discovery requests
during117seconds. Actual installed runtime smokes passed on macOS ARM64,
macOS x64 under Rosetta and native Linux x64 on Daytona. Raw token
browser entry was not exercised; the encrypted connection was created
through the normal API.

The original Daytona file attempt timed out during delayed semantic
dispatch. Its precise stalled layer remains unresolved. Independent
ordinary delivery and the other19 cells passed before one instrumented
recheck passed8/8 with unchanged source,prompt,assertions and deadlines.
No causal latency repair is claimed.

After current-master reconciliation,129 connection tests,59 runner
tests,72 shared eval tests and88 recovery/workspace tests pass.
Migration generation/safety, unchanged profile identity and UI token
gates pass. Prior required CI was green. Fresh exact-head required CI
and E2E are green for all four updated heads. Each has a fresh
Greptile5/5 review and zero unresolved review threads. The [final
normal-package cloud
build](https://github.com/paperclipai/paperclip/actions/runs/39414239704)
is running. Recursive typecheck,full CI test shards,build and all8
browser shards pass. These checks cover the final source; no additional
local full-suite pass is claimed.

The [frozen image
build](https://github.com/paperclipai/paperclip/actions/runs/39334401638)
and [original normal package
build](https://github.com/paperclipai/paperclip/actions/runs/39334407471)
passed. The exact image is published and independently retrieved
anonymously. No separate full-image scan is claimed. All18 original
normal archives were scanned with zero selected credentials. Docker
builds run in the cloud. Provider USD remains unknown and
GitHub-attributed.

**Qualification is complete on the recorded frozen build. Normal
protected merge, automatic master canary publication and final
shipped-package local/Daytona canaries remain. No production deployment
is claimed.**

## Risks

Historical records are evidence only. They must not be treated as
current qualification or as permission to launch an old provider
profile.

## Model Used

OpenAI Codex, based on GPT-6. The exact serving model ID and context
window are not exposed in this task. Used for code changes, review and
tool-assisted verification.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [ ] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-20 11:44:30 +00:00
DottaandPaperclip d855e550ad Finish Copilot native runtime on current master (#15701)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Paperclip Runner controls provider processes, permissions and task
completion.
> - Copilot needs its pinned distribution, native message identities and
accepted semantic completion receipts.
> - The release must preserve saved-token access and task lifecycle
guarantees.
> - This pull request will keep the current completion and recovery
fixes while adding the Copilot runtime.
> - The benefit is a reviewable part of the Copilot production release.

## Linked Issues or Issue Description

Refs #14434. Supersedes the runtime work in #15560. This is the first PR
in the stack; #15703, #15705 and #15706 follow. Related alternative
adapter work: #15881. This change uses the shared Runner path.

## What Changed

- Pin Copilot CLI 1.0.88 and bind the integrated implementation as
profile45.
- Keep native instruction, permission, receipt, process ownership and
cancellation boundaries.
- Preserve current master completion continuation and remote
verification behavior. Other provider release identities stay unchanged.

## Verification

Final reviewed source
[`4f3f1af807d2ed21adabb04c2f27f4df9c4bc8d5`](https://github.com/paperclipai/paperclip/commit/4f3f1af807d2ed21adabb04c2f27f4df9c4bc8d5)
includes master `cde944ed75648adfb569e86133adc8b118b55dd6`. The combined
four-part PR tree matches it except for the CI-owned lockfile. Every
prior public PR head remains an ancestor. Released master migrations
remain unchanged; Copilot adds migration361. No unrelated provider is
enabled.

Copilot CLI1.0.88 and profile47 retain digest
`sha256:55044aa235e88b3fe36ec8a556ee1e3382590870aab907e4462ef7d64af49cea`.
The pending qualification marker is removed. The [qualification
record](https://github.com/paperclipai/paperclip/blob/4f3f1af807d2ed21adabb04c2f27f4df9c4bc8d5/doc/plans/2026-10-20-copilot-qualification-v47.json)
reports **20/20 Product cells,154 assertions;7/7 protocol cases,46
assertions** against frozen installed application
`c2616370800f5f6df45246b0890ba35a7cd2faab`. Both environments use the
exact authenticated model `gpt-5.6-luna`. Every passing Product case
confirms cleanup. Automatic behavior retries are disabled. Original
failed attempts remain recorded.

The ordinary installed remote journey passed saved-token selection,
authenticated model discovery, normal UI save/reopen, metadata-only
Test, task completion, accepted receipt and an exact19-byte browser
download. An open model catalog caused no new discovery requests
during117seconds. Actual installed runtime smokes passed on macOS ARM64,
macOS x64 under Rosetta and native Linux x64 on Daytona. Raw token
browser entry was not exercised; the encrypted connection was created
through the normal API.

The original Daytona file attempt timed out during delayed semantic
dispatch. Its precise stalled layer remains unresolved. Independent
ordinary delivery and the other19 cells passed before one instrumented
recheck passed8/8 with unchanged source,prompt,assertions and deadlines.
No causal latency repair is claimed.

After current-master reconciliation,129 connection tests,59 runner
tests,72 shared eval tests and88 recovery/workspace tests pass.
Migration generation/safety, unchanged profile identity and UI token
gates pass. Prior required CI was green. Fresh exact-head required CI
and E2E are green for all four updated heads. Each has a fresh
Greptile5/5 review and zero unresolved review threads. The [final
normal-package cloud
build](https://github.com/paperclipai/paperclip/actions/runs/39414239704)
is running. Recursive typecheck,full CI test shards,build and all8
browser shards pass. These checks cover the final source; no additional
local full-suite pass is claimed.

The [frozen image
build](https://github.com/paperclipai/paperclip/actions/runs/39334401638)
and [original normal package
build](https://github.com/paperclipai/paperclip/actions/runs/39334407471)
passed. The exact image is published and independently retrieved
anonymously. No separate full-image scan is claimed. All18 original
normal archives were scanned with zero selected credentials. Docker
builds run in the cloud. Provider USD remains unknown and
GitHub-attributed.

**Qualification is complete on the recorded frozen build. Normal
protected merge, automatic master canary publication and final
shipped-package local/Daytona canaries remain. No production deployment
is claimed.**

## Risks

Shared Runner behavior can affect active tasks. Exact profile admission
rejects stale runtime identities. The final campaign and installed
canaries remain release gates.

## Model Used

OpenAI Codex, based on GPT-6. The exact serving model ID and context
window are not exposed in this task. Used for code changes, review and
tool-assisted verification.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [ ] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-20 06:31:47 -05:00
b448710986 fix: derive startup warmth from per-layer reuse evidence (#16908)
## Thinking Path

> - Paperclip helps people manage AI agents and inspect their work.
> - Agent startup can reuse a lease, workspace, Runner, process, or
session.
> - A session ID can remain the same when other resources are new.
> - The old cold/warm label did not show these separate decisions.
> - This pull request records closed reuse receipts and derives labels
from them.
> - Reports now show partial reuse and missing evidence.

## Linked Issues or Issue Description

Refs #11685. That issue tracks a specific ACPX fingerprint repair. This
change records reuse evidence across startup resources. It does not
repeat that repair.

**What existing behavior does this improve?**

Startup labels in the operator trace and Product E2E reports.

**Current behavior**

A cached runtime or a continuous session can suggest a warm startup even
when workspace staging or provider launch work occurs.

**Proposed behavior**

Record each layer's reuse decision and a closed reason. Record observed
provider launch counts. Use `warm`, `cold`, `partial_reuse`, or
`unknown` from those receipts. Keep old runs unknown when they have no
receipts.

## What Changed

- Add local run-log receipts for the lease, workspace, Runner, provider
process, and provider session.
- Count physical ACPX launches, including respawns. Preserve the reason
for a new process.
- Reuse native workspace adoption and session lifecycle evidence. Keep
native and bridged remote provider-process reuse and launch counts
unknown where physical evidence is absent.
- Show the per-run summary in retained results and the dashboard. Keep
missing legacy values explicit.
- Set the legacy trace boolean only for fully evidenced cold or warm
startup. Keep the operator OTLP gate. Add no first-party Telemetry.
- Test full reuse, workspace invalidation, two direct provider launches
with session continuity, and report generation.
- Start the final diagnostic write without waiting for persistence. Keep
lease cleanup independent of a stalled event sink.
- Keep remote provider evidence unknown after runtime setup fails or the
host relay starts twice.
- Align a stale Pi support-test expectation with current master profile
28 and its suite fingerprint. Keep the qualification rules unchanged.

## Verification

- Passed: all 319 runtime, startup-timing, reuse-summary, and native
workspace-history tests. Disposable local Git tests used the native Git
binary.
- Passed on the current commit: all 2,768 Runner E2E support tests
across 128 files. This includes report and history tests for generated
HTML and normalized JSON.
- Passed: `pnpm --filter @paperclipai/adapter-utils typecheck`.
- Passed on `df60f8dbdbfcb6d80c84cd3bf563f8d58b2f9f03`: all PR CI gates,
including repository typecheck and build, all test shards, and browser
tests. Both automated reviews are 5/5. GitHub reports 55 successful
checks, one neutral review, and two skipped Storybook checks.
- The first server shard run failed because an unchanged
workspace-runtime fixture did not accept health connections within 10
seconds. Its isolated local test and the single failed-jobs rerun both
pass. This establishes recovery; the cause of the first timeout remains
unknown.
- Passed in the hosted source run on this exact commit: recursive
typecheck, token gates, the large Runner E2E typecheck, Runner E2E unit
tests, and build. The retained `source.txt` matches this PR head.
- The extra unsharded `pnpm test:run` reached its 60-minute limit (exit
124). It has no complete verdict. The broad workflow therefore reports
failure. No assertion-failure marker appears in the retained partial
log. Full-suite acceptance uses the passing canonical PR CI partitions.
A read-only inventory check found no gaps across 1,023 general server
files, 161 serialized suites, and 20 workspace projects. The separate
chat/native Runner lanes cover the excluded server files. No tests or
timeouts were weakened. The local environment has 4 GiB of memory. Use
CI for the large Runner E2E typecheck.
- The initial report tests failed because the harness could not resolve
package imports from the repository root. Relative source imports fixed
that failure.
- The first broad local run had timeouts from the environment Git
bridge. Native Git resolves the ancestry timeout and all runtime tests
pass. The added report fixture lacked its required screenshot; the
corrected report tests pass. A stale master assertion expected Pi
profile 27, while the generated profile is 28. Updated its expectation
and exact suite fingerprint; all 78 targeted support tests pass. The
clean full support run passes all 2,768 tests.
- The three review regression cases failed before repair. They showed
remote counts of zero and two, and a completed run that waited for the
final diagnostic sink. They now pass. The stalled-sink case keeps
persistence pending while the run returns, both bridge stops run once,
and the staging lock map becomes empty.
- Hosted evidence for this commit: [source
verification](https://github.com/paperclipai/paperclip/actions/runs/39335475416),
[retained command logs and status
table](https://github.com/paperclipai/paperclip/actions/runs/39335475416/artifacts/12228829282).
All listed commands exited zero except the incomplete unsharded test
command described above.
- The physical-launch test drives the executor's spawn callback twice.
The native workspace test uses real Git repositories and verifies reuse
and invalidation. These are deterministic tests, not a paid provider
qualification campaign.

## Risks

- Consumers must handle `partial_reuse` and `unknown`. Partial evidence
no longer produces a legacy cold/warm boolean.
- Native and remote bridged provider process evidence is still
unavailable on some paths. The report shows unknown values for those
paths.
- Receipt emission is best effort. Missing receipts reduce confidence in
a label and must not change execution or settlement.
- No schema migration, first-party Telemetry event, or endpoint default
changes are included.

## Model Used

OpenAI Codex, based on GPT-6, used reasoning, repository tools, and code
execution. The exact provider model ID and context window are not
exposed to this session. The existing implementation checkpoint was
preserved from the earlier agent run.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: devinfoley <139239+devinfoley@users.noreply.github.com>
2026-10-19 21:52:57 -05:00
DottaandPaperclip bc091f0a21 fix(recovery): recover retained workspaces before saved messages (#16906)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - A stopped run can leave useful files in its original sandbox.
> - The server keeps that sandbox when it cannot confirm file copyback.
> - The task can then save new user input but offers no safe way to
recover the files.
> - A retry of the old agent turn can repeat work that already finished.
> - This pull request recovers files through the existing workspace
owner and delivers only saved human input.
> - The user can recover a task without certifying infrastructure facts
or losing completed work.

## Linked Issues or Issue Description

Refs #16883 and #16835 for publication receipts and verified process
termination.
Related: #16478 clears stale holds after copyback already succeeded.
This change performs the missing export and records its proof. #16901
manages the main GitHub response comment and does not perform workspace
repair.

**What happened?**

A failed run retained its workspace. A later user message stayed saved
behind a file-repair hold. The task asked the user to verify process
termination and file recovery but offered no repair control. Sending a
message could show an optimistic Working state and move the task to Todo
before admission succeeded.

**Expected behavior**

The harness should recover the original files when it can prove
ownership and termination. It should preserve newer edits and completed
operations. Only waiting user input may start another turn. Missing
evidence must keep the source held with a specific explanation.

**Steps to reproduce**

1. Interrupt a sandbox run before workspace finalization succeeds.
2. Retain its exact allocation and save a user follow-up.
3. Observe the file-repair hold and missing end-user repair path.

## What Changed

- Add source-bound background recovery for native and legacy runs. An
accepted native result is not required.
- Share the physical copyback lock and durable owner. Resume only the
exact stopped allocation, export files, verify persistence and obtain a
fresh stop receipt.
- Persist retry limits and idempotent requests on the existing recovery
record. Limit each server to two background exports. Add an indexed
candidate scan and a separate cleanup obligation.
- Add a task-editor recovery endpoint. Deny agents and viewers. Reject
caller-supplied stop or repair claims.
- Deliver waiting human input once through ordinary admission. Preserve
pause, approval, budget and assignment gates. Require historical
conversational-adapter evidence for legacy-to-Runner continuation.
- Include exact GitHub publication receipts in continuation context.
Preserve unknown effects and the original failed run.
- Show observed recovery progress, a transient-failure retry action and
specific service blockers. Keep saved messages visible. Suppress false
startup feedback and implicit Todo promotion behind a file hold. Hide
unavailable workspace links.
- Update execution semantics, capability maps and production-component
stories.

## Verification

- Red: the original read model failed the new recovery-progress
assertion; the other 23 checks in that file passed.
- Passed: recovery regressions with 28 cases with real PostgreSQL,
files, tar and Git operations. Lifecycle provider calls are controlled
test boundaries. Coverage includes native/legacy export, concurrent
owners, rollback after export, interrupted archive export with a new
database connection, lost replies, historical discovery, durable retry
limits, separate cleanup and saved-input delivery. The actual candidate
query uses its partial index with 3,000 unrelated history rows. A first
automatic repair can bind verified old-controller stop proof without an
accepted native result. Review also reproduced and fixed export-only
continuation and cleanup lost after a committed repair. Cleanup remains
discoverable without waiting input and after task reconciliation.
- Passed: two GitHub integration cases verify that continuation context
carries the existing publication receipt and does not write another
response. Company and task boundaries are checked.
- Passed: 293 continuation, workspace-sync, platform-receipt and OpenAPI
checks. After file repair, actual dispatch retains pause, cancellation,
approval, real budget-policy and assignment gates.
- Passed: 174 route checks, including editor admission, agent/viewer
denial and rejection of fabricated repair claims.
- Passed: 351 task detail, workspace properties and comment-reopen
checks after updating the new read boundaries and asynchronous
workspace-link expectations. Two new route cases keep held tasks Blocked
when a comment is saved.
- Passed: 265 task-thread and recovery-notice checks. The broader
continuation suite also passed; its new legacy migration case first
exposed a gap that the focused recovery suite now covers.
- Passed after rebase: `pnpm -r typecheck` and `pnpm build`. The later
master merge adds an unrelated permission migration; recovery migration
generation and safety checks passed after the merge.
- Passed: token gates, module boundaries, map structure and migration
checks. The recovery index is migration 0360 after current master.
- Browser: inspected the production recovery component and its
retry-to-queued transition with fixture data. The first dev dependency
load failed; a reload after optimization resolved it. This is UI
evidence, not a live provider recovery claim.
- Every test shard passed on final commit `bbbc09efb4`. The older local
`pnpm test:run` was stopped after the complete CI test matrix passed.
Local full typecheck and production build passed. The first CI build
compiled and booted, then lost its runner during the clean public
npm-install check. An isolated retry passed the build, production boot
and clean public npm-install verification.
- Greptile reviewed final commit `bbbc09efb4` at 5/5. All review threads
are resolved.
- The change is not deployed. Hosted recovery remains unverified until
the served revision includes this change.

## Risks

- Recovery crosses process, provider and persistence boundaries. Missing
or mismatched ownership, stop, descriptor or file evidence keeps the
hold. It never selects a replacement allocation or silently starts over.
- File recovery does not certify external action outcomes or authorize
replay. New input still uses normal execution admission.
- Historical sources without sufficient durable evidence can remain
blocked. Destructive reconstruction stays separate.
- The index migration is idempotent. It changes no task data. Snapshot
pruning follows repository policy.

## Model Used

OpenAI Codex, `gpt-6.1-sol`, with code execution and browser tools.
`gpt-6-astra` assisted earlier investigation. The runtime does not
expose the context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-19 21:51:46 -05:00
DottaandPaperclip 16689de291 fix: add one-click retry for restricted workspace setup (#16909)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Tasks need a clear way to resume after a setup failure.
> - A shared repository can contain another task that the assigned agent
cannot read.
> - Paperclip correctly stops before the agent starts, but the user must
then understand workspace settings to recover.
> - This pull request gives that failure a single Retry button and
selects a clean copy of the configured repository through normal
admission.
> - The task keeps its assigned agent and execution settings, while
access checks and existing work remain protected.

## Linked Issues or Issue Description

Related: #16895 classifies the restricted source failure. This change
adds the user recovery action. #16906 handles retained files after
execution; this change handles a setup failure before execution starts.

**What existing behavior does this improve?**

Recovery of a task whose shared repository includes a task workspace the
assigned agent cannot read.

**Current behavior**

The task stops before provider work and asks the user to understand
workspace choices or access grants.

**Proposed behavior**

Show Retry above the task message box, independent of loaded
conversation history. One click requests one attempt using a clean
checkout of the configured remote. Show Retrying while the request is
pending. Show an error only if the request fails.

**Reason and benefit**

The user can resume work without understanding repository isolation or
changing access to another task.

**Breaking changes**

None. The recovery source value is server-owned. The public workspace
selection request does not accept it. No migration is required.

## What Changed

- Add one Retry control above the composer in both task conversation
views. It stays available when an older notice is outside the loaded
comment pages.
- Bind recovery to the latest failed run, current assignee, and recorded
proof that provider work did not start.
- Use the existing atomic recovery route and pending workspace
selection. Normal admission clears the old session and creates the
isolated checkout.
- Choose a fresh task-owned branch for recovery, including fixed project
branches, existing task branches, and adapter branch overrides. Preserve
the model, environment, setup commands, pending user workspace choices,
previous files, and all execution gates.
- Update execution documentation and both workspace maps.

## Verification

- Passed all 461 tests in the eight affected database, Git, HTTP,
workspace binding, and conversation suites after the review fixes. An
additional 292 tests passed after the final compatibility fixes,
including IssueDetail and recovery action routing.
- Concurrent HTTP retries produce one wakeup. Paused projects and runs
that started provider work reject recovery without changing the
workspace.
- Real Git tests exclude private files, private commits, and unpublished
original files from the clean checkout, preserve the original, and
exercise reuse, cleanup, and reopen.
- Verified in a running local app: a task failed twice, displayed only
Retry, and reached Done after one click. A second browser test put the
failure notice behind 501 newer comments and used a fixed project
branch. Retry stayed visible and the task reached Done. The
credential-free process worker used the selected checkout and wrote its
result there. This does not claim a live model-provider run.
- The first manual fixture lacked a responsible-user membership and
failed after successful workspace recovery. Corrected the fixture,
retained that failure evidence, and verified the full flow with ordinary
authorization.
- Full typecheck, build, token gates, and map checks passed. The full
local suite was stopped after review changed its source during
execution; current-head CI provides the complete suite result.
- An earlier unrelated peer-comment read test hit a socket hangup. The
next complete affected-suite run passed; the first failure is retained
in local evidence.
- Current-head CI hit an unchanged runner credential-concurrency test
failure. That lane passed on the preceding commit, and all 42 credential
tests passed locally. The original failed job is retained; the one-time
rerun passed. All latest-head CI checks are green (55 success, 2
skipped, 1 neutral), and Greptile is 5/5 with both review threads
resolved.

## Risks

- A remote repository outage can still prevent the next attempt. Retry
does not grant access or copy unpublished files from the old checkout.
- Recovery accepts only the latest recorded pre-provider failure and
preserves normal execution gates. This limits duplicate work and stale
recovery requests.
- No database migration, dependency, or lockfile change.
- The first review found fixed-branch retry loops and dependence on
paginated notice history. Both had failing regressions before the fixes
and now pass targeted tests and the combined browser journey.
- Full CI then caught assumptions about missing run evidence and
unrelated recovery actions. The final changes tolerate absent evidence
and scope the new lookup to board-owned actions with valid run IDs. The
previously failing suites now pass locally.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, repository tools, code
execution, and browser verification. The exact serving model ID and
context window are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-19 21:49:44 -05:00
DottaandPaperclip 7ec6e1a237 fix(runner): explain invalid arguments for assigned tools (#16905)
## Thinking Path

> - Paperclip coordinates agents through authorized tools.
> - The native runner validates arguments before it dispatches a tool
call.
> - Schema failures give repair guidance for only five built-in tools.
> - Assigned-tool discovery receives a generic rejection, so an agent
can mistake invalid arguments for missing access.
> - This PR applies the existing safe schema feedback to every
authorized tool.
> - Agents can correct their calls while authorization, approval, and
replay checks remain in force.

## Linked Issues or Issue Description

**What happened?**

An invalid `paperclip_search_assigned_tools` call returned only
`Paperclip rejected this semantic tool call`. The call never reached the
assigned-tool gateway. The same feedback gap affects arbitrary assigned
app tools.

**Expected behavior**

Identify argument validation as the cause. Return bounded schema
locations and ask the provider to correct its arguments. Do not expose
submitted values or grant access to unassigned tools.

**Steps to reproduce**

Prepare an authorized discovery tool. Submit an invalid query or
optional argument through the native runner. Observe the generic error
before this fix. Correct the arguments and confirm one dispatch after
this fix.

**Paperclip version or commit**

Reproduced on master at `4970d5ed3d`. The incident did not retain its
rejected arguments, so the tests cover representative invalid inputs
rather than claim to replay that exact payload.

**Deployment mode**

Native runner with the Codex app-server driver. Local verification uses
macOS ARM64 and controlled provider fixtures.

Related: #16868 added bounded monitor validation feedback. #16723
changes runtime MCP catalog loading; this PR changes the Rust runner
validation response and does not depend on that work.

## What Changed

- Supply generic repair guidance for any authorized tool whose arguments
fail JSON Schema validation. Preserve specific built-in hints.
- Keep the existing three-location and 512-byte limits. Do not include
input values or unknown keys. Preserve generic authorization failures
and the existing retry flag.
- Cover missing fields, wrong types, null optional fields, bounds,
unknown fields, unchanged rejected-call state, corrected calls, and
completed-call replay protection.
- Exercise rejection, correction, one dispatch, and successful
completion through the real Codex driver with a controlled provider
subprocess.
- Document the behavior and its verification scope in execution
semantics and the agent access map.

## Verification

- Red: both new runner regressions failed on the original generic
rejection. The existing API-validation regression passed.
- Green: all seven selected validation tests passed. The new Codex
transport regression passed with one rejection and one corrected
dispatch.
- `cargo fmt --manifest-path packages/paperclip-runner/runner/Cargo.toml
--all -- --check`, `node scripts/check-maps.mjs`, and `git diff --check`
passed.
- Full Rust workspace tests, the repository build, and sequential
repository typecheck passed. The existing assigned-tool gateway suite
passed all 30 tests. All hosted test and end-to-end jobs passed on this
head. The duplicate local `test:run` was interrupted after the hosted
suites passed; its local result is incomplete. The hosted build and
clean public npm installation check also passed. All current-head CI
gates are green, including the final verify and e2e aggregates.
- Greptile reviewed commit `3e2743e1e15b3b13a7d803ce4d828510e41fb22a`:
5/5, no actionable findings.
- Setup evidence: master has a stale dependency lockfile. Dependencies
were resolved with the pinned pnpm 9.15.4; lockfile changes are
excluded. The first full typecheck overlapped the build and failed
copying a generated shared-package file. The sequential rerun passed
with no source change. The initial copy failure remains recorded here;
the concurrent build-output race was not separately reproduced.
- The provider is simulated. This proves runner validation and transport
recovery, not that a live model always retries or that GitHub
credentials work.

## Risks

The provider now sees schema locations for all authorized tools. The
existing sanitizer and bounds still apply. Unknown input keys and values
remain excluded. No schema, permission, approval, automatic tool replay,
database, or connection-auth changes are made. Unauthorized tools still
get a generic rejection.

## Model Used

OpenAI Codex (GPT-6), with reasoning, source inspection, and tool
execution. The exact runtime model ID and context-window size are not
exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-19 17:03:42 -05:00
DottaandPaperclip e5927e1db9 fix: give commentary its own default read permission (#16903)
## Thinking Path

> - Paperclip lets people manage AI agents and inspect their work.
> - Commentary collects agent suggestions and complaints for company
members.
> - Commentary used the permission for detailed agent-action audits.
> - Owners, admins and viewers could therefore receive a permission
error when they opened Commentary.
> - This pull request gives commentary its own permission and enables it
for all human company roles.
> - Members can read feedback while task privacy and detailed audit
access keep their own checks.

## Linked Issues or Issue Description

Refs #16884, which added the Commentary browser. A search found no open
PR for this permission fix.

**What happened?**

Commentary returned `Missing permission: audit:view_agent_actions` for
company members without the detailed audit grant. Default owners, admins
and viewers did not receive that grant.

**Expected behavior**

All human company roles can read commentary by default. A separate
`commentary:view` permission controls this access. Private source tasks
remain private. Commentary access does not grant detailed agent-action
audits or CSV exports.

**Steps to reproduce**

1. Sign in as an active company owner, admin or viewer without
`audit:view_agent_actions`.
2. Open Audit, then Commentary.
3. Observe the permission error before this change.

**Paperclip version or commit**

Base commit: `7c58ea07b2`.

**Deployment mode**

Authenticated server or Cloud tenant.

## What Changed

- Add `commentary:view` to the shared permission contract and all human
role defaults.
- Require that permission for commentary list and detail reads.
- Add an idempotent upgrade migration for existing active human members.
Preserve existing grants and scopes.
- Add the commentary default when approving saved human invitation
grants that omit it, including pre-upgrade invitations. Preserve
explicit commentary scopes.
- Add regression coverage for role defaults, permission removal, audit
separation, private tasks and migration replay.
- Update the API description, specifications, database notes and access
maps.

## Verification

- Passed 68 tests across commentary reads, role grants, old-invitation
HTTP acceptance, migration replay, agent audit routes, access services
and migration snapshot drift under the repository's locked dependencies.
- Confirmed the new role and read tests failed before the
implementation.
- `node scripts/check-maps.mjs` passed.
- Migration numbering and safety checks passed during the build.
- Full `pnpm -r typecheck` and `pnpm build` passed locally after the
invitation fix.
- The final-commit CI matrix passed, including all test shards,
typecheck, build, public-install checks and canary smoke. The redundant
local `pnpm test:run` was stopped after the full CI matrix completed;
the 68 focused local regressions passed separately.
- The first install bypassed the stale lockfile and selected a newer
diff-viewer API. The initial typecheck and build failed in that
unrelated plugin. Installing the locked versions cleared both failures;
the tracked lockfile is unchanged.
- The first locked-dependency regression run hit the 15-second limit
while importing the audit route graph in its first test. Moving that
import into suite setup fixed the timeout; all 58 regressions then
passed.
- Greptile found that pre-upgrade invitations retain old grant lists.
New helper and HTTP regressions reproduced this gap before the fix, then
passed after approval added the missing commentary default.
- Greptile reviewed the final commit at 5/5 with no remaining actionable
findings. Its earlier thread is resolved.
- No UI code changed. The permission tests use real disposable
PostgreSQL databases and HTTP routes.

## Risks

- The upgrade deliberately enables commentary for every existing active
human company member, including viewers. Existing commentary grants
retain their saved scopes.
- Source-task privacy still filters previews, counts, searches and full
messages. Agent-authenticated browsing remains denied.
- Agent-action audit grants, detailed filters and CSV export permissions
keep their current behavior.

## Model Used

OpenAI Codex, based on GPT-6, with reasoning, repository editing and
command execution. The exact runtime model ID and context window are not
exposed to this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-19 16:58:17 -05:00
DottaandPaperclip 7c58ea07b2 fix(issues): guard prepared task promotion by status version (#16893)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Integrations can prepare a backlog task before its assigned agent
starts.
> - A person can change its status or assignment during preparation.
> - An unconditional promotion can replace that newer decision.
> - Safe promotion needs a saved revision that includes every assignment
path.
> - This pull request checks that revision under the task row lock and
derives policy cleanup from the locked row.
> - The benefit is safe initialization recovery with the existing
company, task, and run authority.

## Linked Issues or Issue Description

Prerequisite #16896 has merged. This PR now targets master and contains
only the conditional promotion API. The prerequisite fixed the confirmed
baseline first-upload browser regression.

**What happened?**

A client that saves a task's initial documents and then sends an
unconditional status update can override a concurrent status or
assignment decision. The update validator previously dropped an expected
version, so clients could not make this promotion conditional. Some
direct assignment and release paths also did not advance the revision.

**Expected behavior**

A prepared task moves from backlog to todo only if its original status
and assignment revision still matches. A stale request returns 409
before a task mutation, audit publication, or wake. Policy cleanup
preserves unrelated saved settings.

**Steps to reproduce**

1. Create a backlog task and save its statusVersion before preparing it.
2. Release its assignment, or change an assignee and then restore that
assignee.
3. Send `{ "status": "todo", "expectedStatusVersion": <original
revision> }` to its PATCH endpoint.
4. The stale promotion must return 409. A matching revision on an
unchanged backlog task must succeed.

Duplicate and related PR searches found no existing prepared-task
promotion fix.

## What Changed

- Accept an optional nonnegative expectedStatusVersion for exactly a
status-only backlog-to-todo promotion. Reject extra public fields before
parsing can discard them.
- Check the current revision and backlog state under the issue row lock.
Reject stale requests before checkout adoption or execution-control
effects.
- Add SQL migration 0358 to advance the revision for both assignee
fields at the database boundary. Release, administrative release, direct
writes, and assignment round trips now invalidate an old version.
- Derive guarded policy cleanup from the locked row. Preserve review
limits and protected authorization when removing a monitor. Reject
derived ownership changes or review decisions.
- Add schema, real HTTP/PostgreSQL, concurrency, migration replay, and
policy regression coverage. Update the response type, OpenAPI, developer
docs, and access map.

## Verification

- Red before the initial fix: stale requests returned 200 instead of
409, validation removed the expected version, and a stale active task
could adopt a checkout.
- Review found two further defects. Four new release/direct-assignment
tests showed unchanged revisions. The real HTTP/service test returned
422 for a valid two-field promotion after monitor cleanup. Helper tests
also proved that cleanup lost valid review limits and protected
authorization. All now pass after focused repairs.
- Green: 124 route and policy tests, including 7 real Express/PostgreSQL
cases, 37 existing route tests, and 80 policy/helper tests. The real
row-lock race preserves a policy edit committed while promotion waits.
- Green: all 23 database client tests, plus 9 focused assignment and
replay checks. Historical migration 0227 receipt recovery cannot remove
the new assignment trigger. Reapplying migration 0358 leaves existing
rows unchanged and installs one trigger. Combined status/assignment
writes increment once; unchanged assignees do not increment.
- Earlier verification passed all 218 schema/route/service cases and the
generated OpenAPI capability test. Rebased focused regressions passed
all 27 selected cases. Final server TypeScript passed after all repairs;
shared TypeScript passed. Migration safety/numbering, five-snapshot
retention, map validation, and diff checks pass.
- The baseline browser attachment case failed twice on the earlier head.
Separate #16896 proved the lost-composer cause, passed 335 component
tests and the real first-upload journey, and has green CI with a 5/5
review. No assertion or timeout was weakened.
- Some early local checks were blocked by missing or stale sibling
dependency artifacts. This worktree now has its own frozen offline
install and standard SDK prerequisites. The failures and successful
reruns remain in the task evidence.
- Before rebasing, head `3304bb00de6ad6a248b5e046c008072ad20ac8f5`
passed all CI (55 successful checks and one neutral), Greptile 5/5, and
a secondary source review at 5/5 with no unresolved findings. The
secondary reviewer did not execute project tests, inspect CI, or
exercise a live agent journey. Earlier incomplete and must-fix
assessments remain visible; both established findings are repaired
above.
- After #16896 merged, all five CAS commits were rebased onto master
`87d9386ae637c652d1fed09d2046be1bcaeb413b`. Migration 0358 was
regenerated because master added another 0357. Range comparison shows no
other change to the CAS patches; inherited UI commits are absent. The
original head is preserved locally.
- Rebased head `1c0264e51a280b1dbf597725a7e42e72d4be1b1b` passes all 124
route/policy tests, 9 selected assignment/promotion tests, and all 24
database client/snapshot-drift tests. Database build, migration checks,
generated snapshot linkage, five-snapshot retention (0354–0358), maps,
and diff checks pass. Fresh-head CI and review are pending. No
deployment or live agent journey was performed for this API.

## Risks

- The guard supports prepared backlog promotion only. Other statuses or
mixed public mutation fields return 422. A stale revision or non-backlog
row returns 409.
- Preserve the original version from a server that already advertises
this guard before initialization. Older versions did not track every
assignment path. Reconcile older or uncertain initialization instead of
fetching a new revision and blindly retrying.
- Migration 0358 is SQL-only and idempotent. It adds no table, column,
or task backfill. Its separate trigger survives historical
status-migration replay.
- Existing authorization and unguarded updates remain in place. Guarded
promotion does not provide a general lifecycle or review-stage control
API.

## Model Used

OpenAI Codex, GPT-6 family. The exact serving model ID and context
window are not exposed by this session. Used tool calls, code execution,
and test-first regression verification.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-19 16:27:11 -05:00