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Author SHA1 Message Date
DottaandPaperclip 5e3d6e3627 [codex] Preserve plan review context in agent wakes (#8649)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Planning work relies on issue documents, request-confirmation
interactions, and inline plan annotations
> - Agents can be woken after a plan comment, annotation, or
confirmation decision
> - The wake payload needs enough plan-review context for the agent to
act on the specific feedback instead of losing the thread and falling
back to broad refetches
> - This pull request adds bounded plan-review context to wake payloads
and heartbeat context
> - It also teaches the adapter wake prompt renderer to surface those
open plan annotations and interaction results directly
> - The benefit is that agents can continue plan review and plan
acceptance flows with the relevant comments in hand while keeping wake
payloads bounded and company-scoped

## Linked Issues or Issue Description

No matching public GitHub issue was found.

### Subsystem affected

Cross-cutting: `server/`, `packages/shared`, and
`packages/adapter-utils`.

### Problem or motivation

Plan-review continuations can wake an agent after a plan comment, inline
annotation, or request-confirmation decision without enough inline
context about the open plan annotations or accepted/rejected
confirmation target. That makes scoped wakes less reliable because the
agent may need to refetch broad issue history before it can tell what
feedback should be incorporated.

### Proposed solution

Include bounded, company-scoped plan review context in wake payloads and
heartbeat context. The context includes open `plan` annotation threads,
recent annotation comments, truncation metadata, and plan-confirmation
interaction target/result details. Render that information in the
adapter wake prompt so agents see the relevant plan-review feedback
immediately.

### Alternatives considered

Relying on agents to fetch the full issue thread after every plan-review
wake was rejected because it is slower, harder to audit, and easier to
mishandle when the wake is meant to be scoped to a specific comment,
annotation, or interaction result.

### Roadmap alignment

This supports the roadmap areas for Agent Reviews and Approvals, Deep
Planning, and Enforced Outcomes by making plan approval continuations
explicit and actionable.

### Additional context

The implementation keeps payload size bounded with per-thread,
per-comment, and total-body limits. Resolved annotation threads are
intentionally omitted so the wake focuses on feedback still needing
action.

## What Changed

- Added shared `PlanReviewContext` types for plan annotation threads,
comments, interaction targets, and continuation results.
- Added server-side plan review context assembly for open `plan`
annotation threads with bounded thread/comment/body limits.
- Included plan review context in heartbeat context and scoped wake
payloads for planning, annotation, comment, and plan-confirmation
interaction wakes.
- Rendered plan annotation deltas, open plan comments, interaction
results, and accepted target revisions in adapter wake prompts.
- Added focused regression coverage for scoped plan review context, wake
prompt rendering, annotation filtering, and safe standard-mode
annotation wakes.
- Addressed Greptile feedback by bounding the plan-comment DB fetch and
removing unused plan review context input fields.

## Verification

- `pnpm run preflight:workspace-links`
- `pnpm exec vitest run --project @paperclipai/adapter-utils
packages/adapter-utils/src/server-utils.test.ts`
- `pnpm exec vitest run --project @paperclipai/server
--no-file-parallelism --maxWorkers=1
server/src/__tests__/document-annotations-service.test.ts
server/src/__tests__/issue-thread-interaction-routes.test.ts
server/src/__tests__/issues-goal-context-routes.test.ts`
- `pnpm --filter @paperclipai/shared typecheck`
- `pnpm --filter @paperclipai/adapter-utils typecheck`
- `pnpm --filter @paperclipai/server typecheck`
- `git diff --check public-gh/master...HEAD`
- GitHub PR checks are green on
`36d0ac6a5dce27b9d62e201bf6d9829170c5974e`n- Rebased onto current
`paperclipai/paperclip:master` and confirmed GitHub reports the PR as
mergeable
- Greptile Review completed successfully after 2 comments were addressed
and resolved; 0 unresolved review threads remain

## Risks

- Medium: wake payloads now include additional plan-review data, so
limits and truncation behavior need to stay conservative as annotation
volume grows.
- Low migration risk: no database schema or migration changes.
- Low repository hygiene risk: this PR does not touch `pnpm-lock.yaml`,
`.github/workflows`, or media assets.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

OpenAI Codex using `gpt-5` as a coding agent with shell/tool execution.
Reasoning mode and exact context window were not exposed by the runtime.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-06-29 13:26:26 -05:00
DottaandPaperclip 9aa065a38c Make deleted-comment cleanup atomic
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-06-05 03:56:39 +00:00
DottaandPaperclip 1afa337841 Address Greptile deleted-comment feedback
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-06-05 03:43:12 +00:00
Dotta 17fa6fe0fe Add deleted comment regression coverage 2026-06-05 03:20:46 +00:00
DottaandPaperclip b7545823be [codex] Add document annotations and comments (#6733)
## Thinking Path

> - Paperclip orchestrates AI-agent companies through issues, documents,
runs, and durable company-scoped state.
> - Issue documents are where agents and operators capture plans,
handoffs, and work products.
> - Before this change, document collaboration could only happen through
whole-document edits and detached issue comments.
> - Inline document annotations need stable anchors, revision-aware
persistence, and UI affordances that do not break existing document
editing.
> - This pull request adds company-scoped document annotation threads,
comments, anchor snapshots, API routes, and board UI.
> - The benefit is that operators and agents can discuss specific
document passages without losing context as documents evolve.

## What Changed

- Added document annotation tables, schema exports, shared types,
validators, anchor hashing, and text-anchor helpers.
- Added server-side document annotation services and issue routes for
listing, creating, commenting, resolving, and reopening annotation
threads.
- Included annotation summaries in relevant issue document reads and
backup/recovery document workspace behavior.
- Added React UI for inline document highlights, comment panels, mobile
sheet behavior, deep-link focus, and resolved/open filtering.
- Added annotation design artifacts, Storybook coverage, screenshots,
and a screenshot helper script.
- Rebased the branch onto current `paperclipai/paperclip` `master` and
renumbered the annotation migration from `0085_old_swarm` to
`0091_old_swarm`; the SQL uses `IF NOT EXISTS` guards so environments
that previously applied the old migration number can safely apply the
new one.
- Adjusted the new annotation UI tests to use a local async flush helper
because this workspace's React 19.2.4 export does not expose
`React.act`.

## Verification

- `pnpm run preflight:workspace-links && pnpm exec vitest run
packages/shared/src/document-anchors.test.ts
server/src/__tests__/document-annotation-routes.test.ts
server/src/__tests__/document-annotations-service.test.ts
ui/src/components/DocumentAnnotationLayer.test.tsx
ui/src/components/IssueDocumentAnnotations.test.tsx
ui/src/lib/document-annotation-hash.test.ts
ui/src/lib/document-annotation-selection.test.ts`
- Confirmed `git diff --check` passes.
- Confirmed no `pnpm-lock.yaml` or `.github/workflows/*` files are
included in the PR diff.

## Risks

- Medium risk: this adds new persisted annotation tables and routes
across db/shared/server/ui.
- Migration risk is reduced by moving the branch migration to
`0091_old_swarm` after upstream `0090_resource_memberships` and keeping
the SQL idempotent for old `0085_old_swarm` adopters.
- UI risk is mostly around text range anchoring and panel positioning
across long documents, folded content, and mobile layouts; the PR
includes focused unit coverage and design screenshots.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex, GPT-5 coding agent, tool-using software engineering
mode. Context window size is not exposed in this Paperclip runtime.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] If this change affects the UI, I have included before/after
screenshots
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-05-26 06:41:23 -07:00