## Thinking Path
> - Paperclip orchestrates AI agents through a server-side control plane
> - That control plane depends on reliable issue state transitions,
plugin lifecycle behavior, import limits, and startup/shutdown handling
> - Several small runtime fixes had accumulated on the working branch
and were mixed with larger feature work
> - Keeping them separate makes the correctness fixes reviewable and
mergeable without waiting for cloud-sync UI work
> - This pull request groups the server/runtime control-plane fixes into
one standalone branch
> - The benefit is a tighter, safer runtime baseline for retries,
imports, plugin migrations, feedback flushing, and trusted cloud import
handling
## What Changed
- Fixed updated issue list pagination sorting and scheduled retry
comment handling.
- Re-applied pending plugin migrations during hot reload and fixed
plugin-schema worktree seed restore.
- Hardened public tenant DB startup, portable import body limits,
trusted cloud import errors, and trusted cloud tenant import mutation
access.
- Expired stale request confirmations after user comments.
- Added feedback export shutdown hardening so database-unavailable flush
loops stop cleanly.
- Guarded plugin worker `error` event emission when no listener is
registered.
## Verification
- `pnpm install --frozen-lockfile --ignore-scripts`
- `pnpm --filter @paperclipai/plugin-sdk build`
- `npm run install --prefix
node_modules/.pnpm/sqlite3@5.1.7/node_modules/sqlite3`
- `pnpm exec vitest run server/src/__tests__/issues-service.test.ts
server/src/__tests__/plugin-lifecycle-restart.test.ts
server/src/__tests__/server-startup-feedback-export.test.ts
server/src/__tests__/issue-comment-reopen-routes.test.ts
server/src/__tests__/issue-thread-interactions-service.test.ts
server/src/__tests__/issue-thread-interaction-routes.test.ts
server/src/__tests__/body-limits.test.ts
server/src/__tests__/feedback-flush-controller.test.ts
server/src/__tests__/error-handler.test.ts
server/src/__tests__/board-mutation-guard.test.ts
packages/db/src/backup-lib.test.ts` initially exposed local setup issues
and two 5s test timeouts.
- Rerun after local prereq build: `pnpm exec vitest run --testTimeout
15000 server/src/__tests__/issue-comment-reopen-routes.test.ts
server/src/__tests__/issue-thread-interaction-routes.test.ts
server/src/__tests__/feedback-flush-controller.test.ts
server/src/__tests__/server-startup-feedback-export.test.ts` passed.
- Some embedded Postgres-backed tests skipped on this host because local
Postgres init was unavailable.
## Risks
- Runtime-touching branch: startup/shutdown and issue interaction
behavior should be reviewed carefully.
- The feedback export change disables repeated flush attempts only for
database connection-refused failures; other upload failures still log
normally.
- The plugin worker error guard avoids process crashes from unhandled
EventEmitter errors but may hide errors from code paths that expected an
emitted listener.
> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.
## Model Used
- OpenAI Codex, GPT-5-based coding agent with local shell/git/tool use.
Exact hosted model ID and context-window size are not exposed by the
local Paperclip adapter runtime.
## Checklist
- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] If this change affects the UI, I have included before/after
screenshots
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge
---------
Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path
> - Paperclip operators spend most of their time scanning the board,
inbox, sidebar, and local dev status surfaces
> - Small UI and dev-ops frictions make repeated operator workflows feel
slower than they need to be
> - The working branch contained several independent quality-of-life
improvements mixed with larger cloud work
> - Grouping these smaller UI/dev-ops changes together keeps review
overhead reasonable without merging them into feature PRs
> - This pull request collects the operator-facing QoL polish into one
standalone branch
> - The benefit is a cleaner board navigation and local dev recovery
experience without depending on cloud upstream sync
## What Changed
- Relaxed forced 44px touch targets for small inline widgets.
- Fixed mobile mention menu scrolling and sidebar spacing on
touch/mobile layouts.
- Synced inbox hover state with j/k selection.
- Moved plugin sidebar entries into the Work section.
- Added manual dev-server restart action/banner behavior.
- Logged plugin bridge 502 causes for better diagnosis.
## Verification
- `pnpm install --frozen-lockfile --ignore-scripts`
- `pnpm --filter @paperclipai/plugin-sdk build`
- `pnpm exec vitest run ui/src/components/MarkdownEditor.test.tsx
ui/src/components/Sidebar.test.tsx
ui/src/components/SidebarProjects.test.tsx ui/src/pages/Inbox.test.tsx
ui/src/components/DevRestartBanner.test.tsx
server/src/__tests__/dev-server-status.test.ts
server/src/__tests__/health-dev-server-token.test.ts
server/src/__tests__/plugin-routes-authz.test.ts` initially failed only
because plugin SDK `dist` was not built in the fresh worktree.
- Rerun after build: `pnpm exec vitest run
server/src/__tests__/plugin-routes-authz.test.ts` passed.
- The remaining targeted UI/dev-server tests passed on the first
post-install run.
## Visual Evidence
- Sidebar layout and plugin Work section: 
- Inbox/task row selection and hover-state surface: 
- Dev restart banner desktop: 
- Dev restart banner mobile: 
## Risks
- Mostly UI/dev ergonomics with low data risk.
- Sidebar and inbox changes touch frequently used navigation surfaces,
so visual review on desktop/mobile is still useful.
> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.
## Model Used
- OpenAI Codex, GPT-5-based coding agent with local shell/git/tool use.
Exact hosted model ID and context-window size are not exposed by the
local Paperclip adapter runtime.
## Checklist
- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] If this change affects the UI, I have included before/after
screenshots
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge
---------
Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path
> - Paperclip gives operators a workspace diff plugin so they can
inspect agent changes before review
> - The diff view needs reliable base-ref defaults and controls that
stay usable while scrolling large diffs
> - The working branch mixed those plugin improvements with unrelated
server and cloud work
> - Keeping the workspace diff plugin changes isolated makes them easy
to test and review
> - This pull request polishes the workspace diff plugin controls,
base-ref behavior, and sticky headers
> - The benefit is a more predictable diff review surface for agent
workspaces
## What Changed
- Fixed workspace diff default base-ref resolution.
- Improved split/unified and working-tree/against-ref pane controls.
- Made workspace diff headers stay sticky while scrolling.
- Added a review screenshot at
`screenshots/PAP-9841-workspace-diff.png`.
## Verification
- `pnpm install --frozen-lockfile --ignore-scripts`
- `pnpm --filter @paperclipai/plugin-sdk build`
- `pnpm --filter @paperclipai/plugin-workspace-diff exec vitest run
tests/plugin.spec.ts`
- Result: 9 tests passed.
## Risks
- UI-only plugin branch with low data risk.
- The default base-ref inference should be reviewed against unusual
worktree/upstream combinations.
> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.
## Model Used
- OpenAI Codex, GPT-5-based coding agent with local shell/git/tool use.
Exact hosted model ID and context-window size are not exposed by the
local Paperclip adapter runtime.
## Checklist
- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] If this change affects the UI, I have included before/after
screenshots
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge
---------
Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path
> - Paperclip orchestrates AI agents that need scoped, auditable access
to secrets
> - Hosted and external deployments need provider vault configuration
without exposing secret values in Paperclip metadata
> - AWS Secrets Manager vault setup previously required too much manual
operator knowledge
> - Provider vault discovery and removal belong together as an
independent secrets-management improvement
> - This pull request adds AWS provider vault discovery/prefill plus
vault removal flows
> - The benefit is a safer operator path for configuring external secret
storage before higher-level cloud workflows depend on it
## What Changed
- Added shared validators/types for AWS provider vault discovery
payloads and safe provider metadata.
- Implemented AWS provider vault discovery preview on the server.
- Added provider vault removal service/route behavior.
- Added Secrets page UI for discovery prefill, removal messaging, and
related rendering coverage.
- Added Storybook provider-vault fixtures and captured screenshots for
the new UX states.
## Verification
- `pnpm install --frozen-lockfile --ignore-scripts`
- `pnpm exec vitest run packages/shared/src/validators/secret.test.ts
server/src/__tests__/aws-secrets-manager-provider.test.ts
server/src/__tests__/secrets-routes.test.ts
server/src/__tests__/secrets-service.test.ts
ui/src/pages/Secrets.render.test.tsx`
- Result: 4 files passed, 1 embedded Postgres-backed file skipped on
this host because local Postgres init was unavailable.
- `pnpm --filter @paperclipai/ui exec vitest run
src/pages/Secrets.render.test.tsx`
- `pnpm --filter @paperclipai/ui typecheck`
- Storybook screenshot capture against `Product/Secrets` on
`http://127.0.0.1:60381/iframe.html?id=product-secrets--secrets-inventory&viewMode=story&globals=theme:dark`
## Screenshots
Provider vaults tab after this change:
AWS discovery candidate flow:
Provider vault removal confirmation:
## Risks
- Secret provider metadata handling must remain non-sensitive;
validators reject credential-bearing Vault URLs and sensitive AWS
discovery keys.
- AWS discovery depends on deployment credentials being configured
correctly outside Paperclip-managed company secrets.
> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.
## Model Used
- OpenAI Codex, GPT-5-based coding agent with local shell/git/tool use.
Exact hosted model ID and context-window size are not exposed by the
local Paperclip adapter runtime.
## Checklist
- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] If this change affects the UI, I have included before/after
screenshots
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge
---------
Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path
> - Paperclip orchestrates AI agents for zero-human companies.
> - Paperclip Cloud imports local company data into tenant Paperclip
stacks through trusted server-to-server calls.
> - Tenant imports authenticate as board actors with `source:
"cloud_tenant"` because they act on behalf of an authorized stack user.
> - The board mutation guard correctly protects browser session
mutations with trusted `Origin`/`Referer` checks.
> - But the guard treated trusted Cloud tenant calls like browser
session mutations, so server-to-server imports without a browser origin
failed with `403 Board mutation requires trusted browser origin`.
> - This pull request exempts trusted Cloud tenant actors from
browser-origin enforcement while preserving the session-backed browser
guard.
> - The benefit is that authorized Cloud imports can persist into tenant
Paperclip storage without weakening browser CSRF protections.
## What Changed
- Allow `req.actor.source === "cloud_tenant"` through
`boardMutationGuard` without requiring browser `Origin` or `Referer`
headers.
- Add a focused regression test for Cloud tenant POST mutations without
an origin.
- Preserve the existing session-backed rejection test for board
mutations that lack a trusted browser origin.
## Verification
- `pnpm exec vitest run
server/src/__tests__/board-mutation-guard.test.ts`
- Result: 10 tests passed.
## Risks
- Low risk: this only expands the existing non-browser exemption list to
trusted Cloud tenant actors that have already passed tenant-server-token
authentication.
- The browser-session path remains covered by the existing rejection
test, so missing-origin browser mutations still fail.
> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.
## Model Used
- OpenAI Codex, GPT-5 coding agent, tool-enabled local repository
editing and shell verification.
## Checklist
- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] If this change affects the UI, I have included before/after
screenshots
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge
The hand-rolled manifest in buildLocalUpstreamExportBundle was missing the
perEntityTypeCounts field that cloud's buildUpstreamDataCoverageReport indexes
into during manifest_only preview. Compute the counts inline so cloud's
coverage report receives the same field it does from its canonical builder,
and so older clients that hit a non-defensive cloud still work.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
When the cloud rejects a preview as payload_too_large or bad_request,
the wizard previously surfaced the raw error code. Show a code-aware
banner directing the user to continue with Push (which uploads in
chunks) and add an elapsed-time hint near the spinner, since preview
takes ~60s on PAP-scale companies.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
Companies with thousands of issues serialize to >64 MiB when we ship
every entity body to the cloud preview endpoint, so the wizard cannot
leave the Connect step. The cloud now accepts a manifest-only preview
shape (PAP-9797, cloud commit 41d3551); opt into it so the Preview push
button works at PAP scale.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
After the cloud's OAuth-style 302 callback, the local UI mounted
`CloudUpstream` with `selectedCompany` still null because the
CompanyContext hadn't hydrated yet. `applyCompanyPrefix(path, null)`
returns the unprefixed `/company/settings/cloud-upstream`, the React
router refused to match it, and the user was bounced to
`/<defaultCompany>/dashboard` with `token_status` stuck at `pending`.
Derive the prefix from `location.pathname` first (which is already
prefixed because the cloud sent us back to `/<PREFIX>/company/settings/
cloud-upstream?code=...`), and only fall back to the selected-company
issue prefix when the URL has none. Same memoized `settingsPath` is used
for both the post-finish `replaceState` and the start-connect
`redirectUri`, so both halves stay aligned.
Co-Authored-By: Paperclip <noreply@paperclip.ing>
The cloud upstream connect flow built `redirectUri` and the post-finish
`replaceState` from the root path `/company/settings/cloud-upstream`,
dropping the company prefix (e.g. `/PAP/...`). On the 302 return from the
cloud, the React router had no company in context and bounced the user
to `/<defaultCompany>/dashboard`, dropping the `code`/`state` query
params and leaving the connection stuck at `token_status='pending'`.
Use `applyCompanyPrefix` against the selected company's issue prefix so
both the redirect URI and the URL cleanup land back on the same
company-scoped settings route.
Co-Authored-By: Paperclip <noreply@paperclip.ing>
Fixture-driven lab at /ux-lab/cloud-upstream renders the cloud-upstream
page in 8 distinct states (settings pane, connect wizard, schema-mismatch
hard block, preview with conflicts, clean preview, durable progress,
failed-with-retry, finish/activation) using mock data — avoids the
multi-hour cost of seeding a real local-to-cloud run for screenshot
capture. Used to back PAP-9752 captures attached to PAP-9704.
Co-Authored-By: Paperclip <noreply@paperclip.ing>
Hovering an inbox row now sets it as the selected index used by the
mail-client j/k keyboard shortcuts, so the keyboard cursor follows the
mouse instead of disagreeing with it.
Co-Authored-By: Paperclip <noreply@paperclip.ing>
Mobile Safari still felt overly spaced after the prior touch-target
fix. Bring projects, agents, top-level nav items, the New Issue
button, and section headers down a notch on coarse pointers, and
shrink the gap between sections. Desktop spacing is unchanged.
- Nav items / New Issue button: py-2 -> py-1.5
- Project / agent rows: py-1.5 -> py-1
- Section headers: py-1.5 -> py-1
- Inter-section gap: gap-4 -> gap-3
Co-Authored-By: Paperclip <noreply@paperclip.ing>
The @media (pointer: coarse) rule was inflating every button, input,
checkbox, and icon-button to min-height: 44px on mobile Safari. That
stretched Radix checkboxes (which render as buttons) from 16px to 44px
in filter popovers, padded inbox rows past their design height because
the mark-read/archive/collapse buttons inside each row hit the floor,
and bloated sidebar section headers because the collapsible trigger
and heading menu trigger also hit it.
Keep the 44px floor for primary form controls and untyped buttons but
opt out widgets that are explicitly small by design or sit inside a
dense row that already provides the touch target — checkboxes,
toggles, Button size="xs|icon-xs|icon-sm", and any inline
data-slot="icon-button" raw <button>. Native checkbox/radio inputs
keep their UA size too.
Co-Authored-By: Paperclip <noreply@paperclip.ing>
When a local-path plugin's source files change, the dev watcher calls
pluginLifecycleManager.restartWorker. Previously it only bounced the
worker subprocess, so newly added migrations/*.sql files were never
applied — the worker bundle ran against an out-of-date schema until
someone manually triggered POST /api/plugins/{id}/upgrade.
restartWorker now does a full deactivate+reactivate cycle via the
plugin loader, which re-reads the manifest from disk and runs
applyMigrations (idempotently) before starting the new worker. Falls
back to handle.restart() when the loader has no runtime services
(state-only test harness).
Fixes PAP-9585.
Co-Authored-By: Paperclip <noreply@paperclip.ing>
## Thinking Path
> - Paperclip is the control plane that coordinates AI-agent work
through issues, heartbeats, comments, approvals, and auditable recovery
paths.
> - The affected subsystem is heartbeat/recovery orchestration,
especially the optional cheap model profile used for operational
recovery overhead.
> - Cheap recovery should repair status and liveness, but it must not
become the worker lane that writes deliverables, continues source work,
or propagates cheap execution hints into downstream retries.
> - The gap was that cheap-profile hints could follow recovery wake
contexts and assignment overrides farther than intended, making real
work eligible to run on the cheap model.
> - This pull request separates status-only cheap recovery from normal
source-work continuations, adds route guards for deliverable mutations
during cheap status-only runs, and documents the invariant.
> - The benefit is safer retry/recovery behavior: cheap runs can clean
up control-plane state, while any remaining source work resumes through
a normal/original model path.
## What Changed
- Added recovery model-profile work classes so status-only recovery
carries explicit guard context and normal-model continuations scrub
cheap hints.
- Updated heartbeat, productivity review, liveness continuation, and
recovery service wakeups to request cheap only for bounded status-only
recovery work.
- Blocked cheap status-only recovery runs from writing issue documents,
plans, attachments, work products, or assigning downstream work back to
`modelProfile: "cheap"`.
- Added/updated server tests for cheap profile propagation,
artifact/document guards, route authorization, retry scheduling, and
successful-run handoff behavior.
- Documented the recovery model-profile lane in
`doc/SPEC-implementation.md` and `doc/execution-semantics.md`.
- After rebasing onto current `public-gh/master`, stabilized the new
`InstanceSidebar` plugin-filter tests so the PR check lane stays green.
## Verification
- Local: `pnpm exec vitest run --config vitest.config.ts
src/services/recovery/model-profile-hint.test.ts
src/__tests__/issue-agent-mutation-ownership-routes.test.ts
src/__tests__/issue-document-restore-routes.test.ts` from `server/` - 3
files, 37 tests passed after final edits.
- Local: `pnpm exec vitest run --config vitest.config.ts
src/__tests__/heartbeat-process-recovery.test.ts` from `server/` - 44
tests passed after rerunning the cleanup-sensitive file alone.
- Local: `pnpm --filter @paperclipai/ui exec vitest run
src/components/InstanceSidebar.test.tsx` - 4 tests passed.
- Local: `pnpm --filter @paperclipai/server typecheck` - passed.
- Local: `pnpm --filter @paperclipai/ui typecheck` - passed.
- PR checks on latest head `6f8c3b1380f5bd872c6f49f6f7188ecf3bb6d263` -
all green, including `verify`, build, typecheck,
server/general/serialized tests, e2e, Snyk, and policy.
- Greptile: pass 3 returned Confidence Score 5/5 with zero unresolved
Greptile review threads.
## Risks
- Medium risk: recovery behavior is intentionally stricter, so any path
that incorrectly relies on cheap recovery to keep doing source work will
now need to hand back to a normal-model run.
- Low migration risk: no schema changes.
- No product UI changes; the UI file touched is a test-only
stabilization after rebasing onto current `master`.
> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.
## Model Used
- OpenAI Codex coding agent, GPT-5 model family (`gpt-5`), tool use and
local code execution enabled; context window not exposed in this
environment.
## Checklist
- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] If this change affects the UI, I have included before/after
screenshots (N/A: no product UI changes)
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge
## Thinking Path
> - Paperclip orchestrates AI agents for zero-human companies
> - Plugins extend Paperclip with new capabilities; the Instance
Settings sidebar exposes per-plugin settings pages under a "Plugins"
group
> - Some plugins contribute only sandbox-provider drivers (E2B, exe.dev,
Modal). They have no per-plugin settings UI — `PluginSettings` already
redirects sandbox-provider-only plugins to the Environments page
> - As a result, listing them as their own sidebar rows produced
confusing entries that visually nested below the "Adapters" group and
only lead to a stub redirect — there was no value to the user
> - This pull request hides sandbox-provider-only plugins from the
Instance Settings sidebar, and reorders the indented plugin list so it
sits directly under the "Plugins" group it actually belongs to
> - The benefit is a cleaner sidebar that only surfaces plugins with
real per-plugin settings, and removes the visual mis-nesting under
Adapters
## What Changed
- `ui/src/components/InstanceSidebar.tsx`: filter out plugins whose only
contribution is `sandboxProviders` (hybrid plugins that contribute
sandbox providers *plus* something else still get a sidebar entry). Move
the indented plugin list so it renders between the "Plugins" row and the
"Adapters" row instead of after Adapters.
- `ui/src/components/InstanceSidebar.test.tsx`: new test file with 4
cases — sandbox-only plugins hidden, hybrid plugins shown, ordering
(plugin list appears under Plugins and before Adapters), and the
existing non-plugin sidebar items still render.
## Verification
- `pnpm -C ui vitest run src/components/InstanceSidebar.test.tsx` → 4/4
pass.
- `pnpm typecheck` clean on the changed files.
- Manual: visit `/instance/settings/plugins` — "E2B Sandbox Provider"
and "exe.dev Sandbox Provider" rows no longer appear in the sidebar;
remaining plugins are listed directly under the "Plugins" group, not
below Adapters.
**Before:** see the screenshot embedded in the linked issue (`PAPA-375`)
— sandbox-provider plugins show as sidebar rows visually nested under
"Adapters".
**After:** sandbox-provider-only rows are gone; plugin list sits
directly under the "Plugins" group. (A live runtime screenshot was not
captured for this PR because the local server requires an authenticated
browser session not currently available to the agent — happy to add one
on request.)
## Risks
- Low risk. Pure UI filter + reorder, scoped to `InstanceSidebar.tsx`.
No backend or plugin-loader changes. Hybrid plugins that legitimately
need a settings entry are explicitly preserved by the filter. Covered by
4 new unit tests.
## Model Used
- Claude Opus 4.7 (`claude-opus-4-7`), Anthropic, via Claude Code in a
Paperclip heartbeat. Standard tool-use mode (no extended thinking). 200K
context.
## Checklist
- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [ ] If this change affects the UI, I have included before/after
screenshots — before is in the linked issue; after pending live capture
(see Verification)
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge
Closes PAPA-375.
Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path
> - Paperclip orchestrates AI agents for zero-human companies
> - Plugin authors expose configuration via JSON schemas, including
secret fields marked `format: "secret-ref"`
> - At the same time, Paperclip already has a first-class secrets store,
and `SecretBindingPicker` is the canonical UI for binding to one of
those stored secrets
> - But `JsonSchemaForm`'s `SecretField` rendered only a plain password
input, so configuring an E2B (or Modal / Cloudflare / Daytona) sandbox
required leaving the form, copying a secret UUID, and pasting it back
> - This pull request wires `SecretBindingPicker` into `SecretField` so
every plugin secret-ref field gets the picker plus an optional raw-value
fallback
> - The benefit is that secret reuse becomes one click instead of a tab
switch, and the raw-paste path still works for one-off keys or long
SSH-style secrets
## What Changed
- `ui/src/components/JsonSchemaForm.tsx` `SecretField` now renders
`SecretBindingPicker` above the existing password/textarea input.
UUID-shaped values are treated as bound refs (no raw input shown).
Non-UUID values keep the password/textarea visible (auto-opened) for SSH
keys and other long secrets. Empty fields show the picker plus a small
"Or paste a raw value" toggle.
- Selecting a secret writes the secret UUID to the form value — the
server-side resolution in `server/src/services/environment-config.ts`
(`resolveConfigSecretRefsForRuntime` / `collectEnvironmentSecretRefs`)
is unchanged. The version selector on the picker is suppressed
(`allowVersionSelector={false}`) because plugin secret refs always
resolve at `"latest"`.
- `ui/src/components/JsonSchemaForm.test.tsx` mocks the picker (which
requires `CompanyContext` + `QueryClient` providers) and adds coverage
for: picker render, UUID-bound state hides the raw input, picker
selection writes the UUID through `onChange`, raw text keeps the
password fallback. The original multiline (SSH key) case still asserts a
textarea + no password input.
## Verification
- `pnpm --filter @paperclipai/ui test
src/components/JsonSchemaForm.test.tsx` → 4/4 passing
- `pnpm --filter @paperclipai/ui test src/pages/PluginSettings.test.tsx`
→ 5/5 passing (existing consumer of `JsonSchemaForm`)
- `pnpm --filter @paperclipai/ui exec tsc --noEmit` → clean
- Manual: in the company Environments page, edit an environment with a
sandbox driver that exposes a `secret-ref` field (e.g., E2B `apiKey`).
The field should render the secret dropdown above the raw-value toggle;
selecting an active secret persists its UUID, and saving the form
continues to resolve the secret at runtime.
Before/after screenshots: deferred — change was validated by
[@devinfoley](https://github.com/devinfoley) on the main Paperclip
instance before this PR was opened. Happy to add screenshots if a
reviewer wants them.
## Risks
- Low risk. The change is additive in the SecretField: the raw-value
password/textarea path is preserved and auto-opens whenever the stored
value is not a UUID, so existing SSH-key entries and unsaved raw values
are untouched.
- The new heuristic is "if `value` is a UUID, treat it as a bound
secret". A user who somehow pasted a UUID as a literal value (not as a
secret ref) would now see it rendered as a bound (possibly missing)
secret in the picker. The previous UI already treated UUID values as
opaque secret refs at save time (server converts UUIDs straight
through), so the runtime behavior is unchanged.
- Picker pulls company secrets via the existing `secretsApi.list` query.
No new endpoints, no migrations.
## Model Used
- Provider: Anthropic
- Model: Claude Opus 4.7 (`claude-opus-4-7`)
- Capabilities: tool use, extended reasoning
- Surfaced through: Claude Code via Paperclip heartbeat (issue PAPA-377)
## Checklist
- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [ ] If this change affects the UI, I have included before/after
screenshots — deferred; user validated locally before opening the PR.
Will add if requested.
- [x] I have updated relevant documentation to reflect my changes (no
docs needed — internal behavior of an existing form field)
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge
---------
Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path
> - Paperclip orchestrates AI agents for zero-human companies
> - Releases ship via a Docker image built in the `build-and-push` CI
workflow
> - A recent change added `plugin-workspace-diff` to the pnpm workspace;
its `postinstall` hook calls `scripts/link-plugin-dev-sdk.mjs`
> - The Dockerfile's `deps` stage runs `pnpm install` before the full
repo is copied, so the script was missing and `pnpm install` failed with
`Cannot find module`
> - Sandbox-provider plugins have the same hook but are excluded from
the pnpm workspace, so they were unaffected — this was specific to
`plugin-workspace-diff`
> - This pull request copies `scripts/link-plugin-dev-sdk.mjs` into the
`deps` stage alongside the package.json files
> - The benefit is restoring the `build-and-push` CI workflow with a
minimal one-line change
## What Changed
- Add `COPY scripts/link-plugin-dev-sdk.mjs scripts/` to the
Dockerfile's `deps` stage so the `plugin-workspace-diff` postinstall
hook succeeds during `pnpm install`.
## Verification
- Reproduces the original failure on `master` by running `docker build
--target deps .` — fails at `pnpm install` with `Cannot find module
'/app/scripts/link-plugin-dev-sdk.mjs'`.
- With this patch, `docker build --target deps .` completes successfully
through the `deps` stage.
- CI `build-and-push` job (previously failing on
https://github.com/paperclipai/paperclip/actions/runs/26055610103/job/76602841176)
should now pass.
## Risks
- Low risk. One-line addition that copies a single script earlier in the
Docker build. No runtime behavior changes, no app code changes, no
schema changes.
## Model Used
- Claude (Anthropic), model ID `claude-opus-4-7`, extended thinking
enabled, 200K context. Used via Claude Code CLI with tool use (Bash,
Read, Edit, Grep) running inside the Paperclip agent harness.
## Checklist
- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] If this change affects the UI, I have included before/after
screenshots
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge
Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path
> - Paperclip orchestrates AI agents for zero-human companies.
> - Human operators create and edit issues through modal-heavy board UI
workflows.
> - The new-issue dialog embeds markdown editors that render
autocomplete menus through body-level portals.
> - Radix Dialog treats those portal clicks as outside-dialog pointer
events and prevents their default behavior.
> - That prevention made completion items hard or impossible to select
from inside the new-issue dialog.
> - This pull request marks the markdown editor floating autocomplete
menu as allowed dialog-external UI and extends the dialog
outside-pointer handler to preserve those interactions.
> - The benefit is that users can click/tap autocomplete completions
while keeping the existing modal behavior intact.
## What Changed
- Added a stable `data-paperclip-floating-ui` marker and explicit
pointer event handling to the markdown editor mention/autocomplete
portal.
- Updated the new issue dialog outside-pointer guard so editor
autocomplete portals are handled like Radix popover portals.
- Added regression coverage for markdown editor portal markup and new
issue dialog completion selection behavior.
## Verification
- `pnpm exec vitest run ui/src/components/MarkdownEditor.test.tsx
ui/src/components/NewIssueDialog.test.tsx` passed: 2 files, 38 tests.
- Confirmed the branch is rebased onto current `public-gh/master` before
opening this PR.
- Confirmed the diff does not include `pnpm-lock.yaml` or
`.github/workflows` changes.
## Risks
- Low risk. The change is scoped to allowing pointer events from known
body-level UI portals while keeping other outside-dialog pointer events
under Radix Dialog control.
> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.
## Model Used
- OpenAI Codex, GPT-5 coding agent with repository tool use and local
command execution. Exact hosted context window is not surfaced in this
runtime.
## Checklist
- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] If this change affects the UI, I have included before/after
screenshots
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge
Screenshot note: this is an interaction/event-handling fix with no
visible UI change; verification is covered by the focused regression
tests above.
Co-authored-by: Paperclip <noreply@paperclip.ing>
Dotta
