Commit Graph
1165 Commits
Author SHA1 Message Date
7e40ed8c43 feat(status-cards): add experimental status card update view (#10101)
## Thinking Path

> - Paperclip is the open source control plane people use to manage
AI-agent companies.
> - Operators need a board-level way to monitor a changing slice of
company work without repeatedly rebuilding filters or reading raw task
threads.
> - Existing summaries are useful snapshots, but they do not provide a
dedicated query-backed card with refresh policy, change tracking, update
history, and per-update cost visibility.
> - The capability needs to be safe to evaluate before it becomes part
of the default product surface.
> - This pull request adds end-to-end experimental Status Cards, from
schema and query compilation through update orchestration and operator
UI.
> - The entire feature is gated behind the `enableStatusCards`
experimental toggle, including its route and sidebar entry.
> - The benefit is a governed, inspectable way to keep focused
operational rollups current while preserving explicit controls over
refresh frequency and spend.

## Linked Issues or Issue Description

### Subsystem affected

Cross-cutting (`packages/db`, `packages/shared`, `server/`, `ui/`, and
bundled skills/docs).

### Problem or motivation

Operators cannot currently define a reusable natural-language view of
company work, compile it into an inspectable query, and keep its summary
current as matching issues change. Rebuilding filters and rereading task
threads makes board-level monitoring repetitive and hides the
relationship between source changes, refresh cost, and the resulting
summary.

### Proposed solution

Add experimental Status Cards that compile operator intent into a query,
summarize matched work, record each update, expose
manual/interval/reactive refresh policies and costs, and preserve the
last good result across stale, updating, paused, and error states. The
capability is off by default and fully gated behind `enableStatusCards`,
including its route and navigation entry.

### Alternatives considered

- Extend existing one-off summaries: rejected because status cards
require persistent query provenance, refresh policy, update history, and
card-specific cost controls.
- Add a dashboard-only filter widget: rejected because it would not
provide governed background refresh, an update ledger, or an inspectable
compile pipeline.
- Ship the surface by default: rejected in favor of an experimental
toggle while behavior and operator value are evaluated.

### Roadmap alignment

This advances Paperclip’s board-level execution visibility and
output-first product goals. `ROADMAP.md` was checked and no duplicate
status-card initiative was found.

### Additional context

No related open PR was found in the public GitHub search for status
cards. The PR-only design wireframes were removed from the repository
after review; the published prototype remains external to the production
source tree.
## What Changed

- Added company-scoped status-card schema, CRUD APIs, compile
provenance, update ledger, shared contracts, validators, and OpenAPI
coverage.
- Added the text-to-query compile pipeline, bundled `status-card-query`
agent skill, query versioning, and authorized write-back flow.
- Added the experimental board, create flow, lifecycle tiles,
detail/settings/debug drawers, archived view, routing, navigation, and
instance setting.
- Added a change-gated update engine with manual, interval, and reactive
refresh policies, trigger selection, active hours, and daily token caps.
- Added per-update token/cost recording, today and lifetime rollups, and
policy-derived cost previews.
- Added operator documentation and agent-authoring hardening for compile
and update behavior.
- Added PR-prep integration coverage for settings/startup wiring and
replaced raw UI values with design-system tokens.
- Removed the PR-only `design/pap-15023-status-cards` wireframe
artifacts so the repository contains only production feature assets.

## Verification

- `pnpm -r typecheck` — passes on the PR head; includes `ui` `tsc -b`
passing. The UI compile gate was also independently recorded as passing
at `6d7f3cf96b` on July 23, 2026.
- `pnpm build` — passes.
- `pnpm check:token-gates` — passes with all three gates clean.
- `pnpm test:run` — 2,880 tests passed and 1 skipped; the sole failure
was an unrelated 10-second `afterAll` database-cleanup timeout in
`execution-workspaces-service.test.ts`.
- `pnpm --filter @paperclipai/server exec vitest run
src/__tests__/execution-workspaces-service.test.ts` — passes on
immediate focused rerun (25/25).
- `pnpm --filter @paperclipai/server exec vitest run
src/__tests__/instance-settings-service.test.ts
src/__tests__/server-startup-feedback-export.test.ts` — passes (31/31).
- `pnpm --filter @paperclipai/ui exec vitest run
src/pages/StatusCards/StatusCardSettingsForm.test.tsx
src/pages/StatusCards/StatusCardTile.test.tsx
src/pages/StatusCards/format.test.ts src/lib/status-card-state.test.ts`
— passes (26/26).
- Recorded pre-PR QA: compile-pipeline e2e PASS; full lifecycle and cost
QA PASS; security re-review PASS after write-back hardening; UX
approved.
- `pnpm exec vitest run packages/db/src/status-card-migrations.test.ts`
— passes; reapplies migrations `0185`–`0189` against an already-migrated
embedded Postgres database.
- `pnpm --filter /db check:migrations` — passes migration numbering and
safety checks.
- `pnpm --filter /db typecheck` — passes.
- Merged current `origin/master` on July 24, 2026 with no conflicts;
migrations `0185`–`0189` remain unclaimed on master.

## Risks

- The feature introduces five database migrations and a new background
update path; all new DDL is repeat-safe after partial application,
migration numbering/safety checks pass, and update execution is
company-scoped and change-gated.
- Natural-language compilation can produce invalid or overly broad
queries; compile provenance, query validation, debug visibility, and
version history make failures inspectable and recoverable.
- Reactive or interval refresh could increase spend; active hours, max
refresh frequency, daily token caps, per-update cost records, and
budget-paused states bound and expose that risk.
- The branch name contains an internal execution identifier because it
is a fixed handoff branch; it was intentionally not renamed or rebased
per the release handoff instructions.
- Overall rollout risk is limited because the route, navigation,
services, and UI are disabled by default behind `enableStatusCards`.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex using GPT-5.5 with reasoning, repository tool use, shell
execution, GitHub CLI, and test/build execution. The runtime did not
expose a context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change; the fixed execution-workspace
identifier is documented as an authorized handoff exception
- [x] I have run tests locally and they pass, with the one cleanup
timeout passing on focused rerun
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Claude Fable 5 <noreply@anthropic.com>
Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-24 12:26:43 -05:00
Nicky Leach 2002c4fff3 refactor: remove redundant archived project filters (#10177) 2026-07-24 08:34:30 -07:00
Nicky Leach 564870020b Exclude archived projects from the default project list route (#10146) 2026-07-24 07:19:58 -07:00
Devin FoleyandPaperclip 0f898f95af Render managed experimental settings as locked, with a 'Managed by Paperclip Cloud' badge (#10061)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - The experimental settings page renders one interactive toggle per
feature from the settings API
> - On managed instances some values are enforced by the hosting control
plane, and the API now reports those keys as managed
> - Rendering enforced values as live toggles misleads users: the click
appears to work, and the value silently snaps back
> - This pull request renders managed keys as locked toggles with a
"Managed by Paperclip Cloud" badge and guards the handlers so no PATCH
can be emitted
> - The benefit is UI honesty on managed instances, with self-hosted
responses rendering exactly as before

## Linked Issues or Issue Description

Builds on #10058 — renders the per-key `managedKeys` metadata #10058
adds to settings responses (typing shared from #10058 at rebase).

No public issue exists; `feature_request` template fields:

- **Problem or motivation:** on managed instances users see fully
interactive toggles for settings the control plane enforces; changes
appear to apply and never do, with no explanation.
- **Proposed solution:** disabled toggle + badge + guarded handler
driven by the settings response's managed-key metadata; the ~17 uniform
setting cards are extracted into one shared component with copy,
aria-labels, and patch payloads preserved verbatim.
- **Alternatives considered:** hiding managed settings entirely (users
lose sight of the effective value and why it is fixed); tooltip-only
hints on still-active toggles (doomed PATCHes are still emitted and
stripped server-side).
- **Roadmap alignment:** supports the in-progress "Cloud deployments"
milestone in `ROADMAP.md`.

## What Changed

- When the settings API reports a feature key as managed (`managedKeys`
from the managed-config overlay), the experimental settings page renders
that toggle disabled with a badge and a guarded handler, so a click can
never emit a PATCH. Previously, managed-instance users saw fully
interactive toggles they could never actually change. Self-hosted
responses (no `managedKeys`) render exactly as before.
- The ~17 copy-pasted uniform setting cards are extracted into one
`ExperimentalToggleCard` component with titles, descriptions, footnotes,
aria-labels, and patch payloads preserved verbatim; the two bespoke
cards get inline managed handling (the managed auto-recovery toggle also
cannot open its preview dialog).
- `ui/src/api/instanceSettings.ts` response typing now uses the shared
`InstanceExperimentalSettingsWithManaged` / `ManagedSettingMetadata`
types from #10058; `ui/src/pages/InstanceExperimentalSettings.tsx`
locked rendering + card extraction; tests.

## Verification

- 24 page tests (20 existing unmodified + 4 new: locked badge with no
PATCH while unmanaged keys stay editable; managed auto-recovery opens no
dialog; an open recovery preview closes with no PATCH when a refresh
marks auto-recovery managed; self-hosted unaffected): `pnpm --filter
@paperclipai/ui exec vitest run
src/pages/InstanceExperimentalSettings.test.tsx`
- `pnpm --filter @paperclipai/ui typecheck` clean

## Risks

- Low risk. UI-only change; no server or API behavior changes.
Self-hosted responses carry no `managedKeys`, so the page renders
exactly as before there. The card extraction preserves copy,
aria-labels, and patch payloads verbatim, covered by the 20 pre-existing
page tests passing unmodified.

## Model Used

Claude Fable 5 (`claude-fable-5`), extended thinking, agentic tool use;
independently peer-reviewed by a second AI agent before push

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-22 20:46:00 -07:00
0b496c9c03 feat(secrets): add run-bound agent secret access (#9921)
## Thinking Path

> - Paperclip is the open source control plane people use to manage
AI-agent companies.
> - Agents already receive selected company secrets through `env.*`
bindings at run launch, but environment injection is ambient,
long-lived, and not suitable for every secret consumer.
> - The existing binding and secret-access-event models already provide
company-scoped authorization and per-resolution audit seams.
> - Agents need an explicit way to discover only the secrets granted to
them and fetch a value on demand without exposing the wider company
catalog.
> - That capability must remain run-bound, preserve low-trust token
carve-outs, and make every value read visible in both security and
operator audit trails.
> - This pull request adds an `access.*` delivery namespace, two
run-bound agent routes, dual audit logging, documentation, and an
operator grants editor.
> - The benefit is least-privilege, revocable, auditable secret access
while preserving existing env injection behavior.

## Linked Issues or Issue Description

No pre-existing public issue. Related work:

- Refs #9797 — existing in-sheet agent access UI that this PR extends to
distinguish env and API delivery.
- Refs #9918 — complementary searchable-agent picker improvement for the
same secrets sheet.
- Refs #9530 — related company-wide metadata catalog proposal; this PR
intentionally exposes only the authenticated run's granted aliases and
values.

**Problem / motivation:** Agents can currently consume secrets only
through process environment injection. This keeps values resident for
the run, does not support on-demand consumers, and cannot provide a
discrete operator-visible activity event for each agent-initiated read.

**Proposed solution:** Treat `company_secret_bindings` as the source of
truth for agent secret grants. Keep `env.KEY` as env delivery and add
`access.ALIAS` for API-only delivery; an env binding also implies read
access because the value is already present in the agent process. Add
run-bound list/fetch endpoints that derive scope from the authenticated
heartbeat run and never accept caller-selected overlays.

**Alternatives considered:** A company-wide agent-readable catalog was
rejected for this value path because it increases reconnaissance and
does not prove a per-secret grant. Reusing the ephemeral
environment-probe resolver was rejected because it lacks binding
enforcement. Approval-gated reads and user-scoped secrets remain
deferred beyond v1.

**Roadmap alignment:** This extends the completed **Secrets Manager with
per-agent access** roadmap capability from launch-time env injection to
explicit run-bound API delivery without duplicating a separate planned
initiative.

## What Changed

- Added `access.*` agent binding validation and a dedicated run-bound
resolver that combines `secrets:read` authorization with binding-context
enforcement.
- Added `GET /api/agents/me/secrets` for minimal granted metadata and
`POST /api/agents/me/secrets/:key/value` for on-demand value fetches
with `Cache-Control: no-store`.
- Preserved the existing denials for low-trust review agents,
task-bridge credentials, and skill-test tokens; standard long-lived
agent API keys cannot call the run-bound routes.
- Added dual audit behavior: value attempts write `secret_access_events`
and `activity_log` (`secret.value.read`), while metadata listing writes
the lighter `secret.access.listed` activity event.
- Kept env compatibility: `env.*` remains injected at launch and also
implies API read for the same bound agent; `access.*` never becomes an
environment variable.
- Added the agent-settings **Secret access** editor plus
delivery-mode/alias surfacing on the Secrets page, with focused UI tests
and tokenized layout styles.
- Updated OpenAPI, shared types, agent-facing skill documentation, and
API reference documentation.

### UI Screenshots

P3 produced and reviewed three screenshots using mock data; images are
intentionally not committed to the repository:

- `secret-access-editor.png` — agent settings grant editor.
- `secret-access-light.png` — Secrets-page delivery surfacing in light
mode.
- `secret-access-dark.png` — Secrets-page delivery surfacing in dark
mode.

The source attachments are retained with the implementation task and
linked in the internal handoff; the public page publisher was
unavailable in the PR-prep runtime.

## Verification

- `pnpm exec vitest run
server/src/__tests__/agent-secrets-routes.test.ts
server/src/__tests__/secrets-service.test.ts
server/src/__tests__/secrets-routes.test.ts
ui/src/lib/secret-delivery.test.ts
ui/src/components/AgentSecretAccessEditor.test.tsx` — 5 files, 122 tests
passed.
- Security follow-up: `pnpm exec vitest run
server/src/__tests__/agent-secrets-routes.test.ts
server/src/__tests__/secrets-service.test.ts` — 2 files, 73 tests passed
after active-run and version-consistency fixes.
- Final-head CI: all feature, typecheck, build, e2e, security, and
review gates pass; `General tests (server (1/3))` remains red after one
rerun because unrelated `heartbeat-retry-scheduling.test.ts` cleanup
deletes `heartbeat_runs` before referenced `activity_log` rows.
- `pnpm --filter @paperclipai/server typecheck` — passed.
- `pnpm --filter @paperclipai/shared typecheck` — passed.
- `pnpm --filter @paperclipai/ui typecheck` — passed.
- `pnpm check:token-gates` — feature-local arbitrary-value violations
fixed; command still reports five unchanged `#9627` literals outside
this PR.
- End-to-end QA passed all eight acceptance criteria: grant/list, fetch,
dual audit, env-implies-read, denial matrix, revocation, UI rendering,
and env-injection regression. Evidence:
https://github.com/paperclipai/paperclip/pull/9921#issuecomment-5027455492
- Security review returned PASS-with-required-changes; the
implementation uses the required dedicated binding-enforcing resolver,
run-bound JWT restriction, run-derived overlays, minimal metadata, and a
resolver redaction-registration hook. Evidence:
https://github.com/paperclipai/paperclip/pull/9921#issuecomment-5027455382

## Risks

- A compromised agent can exfiltrate any secret explicitly granted to
it; explicit company-scoped/run-scoped grants, revocation, and audit
reduce but cannot remove that inherent capability risk.
- The resolver invokes a redaction-registration hook before returning
values, but the current route has no persistent cross-request per-run
redaction registry. Paperclip-owned later comments/events therefore
cannot yet guarantee automatic scrubbing of a deliberately copied
fetched value; QA classified this as non-blocking residual hardening.
- Audit-event insertion currently fails open if the security-event
insert itself fails; the operator activity event provides partial
redundancy, but a future hardening change should define fail-closed
behavior for value delivery.
- This PR overlaps `ui/src/pages/Secrets.tsx` with #9918 and may require
a straightforward rebase after that PR moves.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex, `gpt-5.3-codex`, with reasoning, repository tool use,
terminal execution, Paperclip API access, and GitHub CLI capabilities.
Context-window size is not exposed by the runtime.
- Anthropic Claude Opus 4.8 with 1M context and tool use assisted with
the UI implementation commit.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-07-22 08:04:39 -05:00
DottaandPaperclip d23fbf8ae4 feat(connections): add AppDefinition Wave 1 catalog (#9981)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Connections is the subsystem that defines which external apps and
MCP-style integrations operators can browse, configure, and run
> - The v3 schema core in #9958 added stable connection identities, auth
metadata, and grant-aware contracts, but the app catalog still used the
older gallery shape
> - The product needs a richer, typed AppDefinition catalog so browsing
and setup can render provider-specific auth and configuration
requirements consistently
> - This pull request moves the Wave 1 app catalog onto generated
AppDefinition data and carries that shape through shared types, server
lookup paths, and app connection UI
> - The benefit is that follow-up runtime and wizard work can build
against one catalog contract instead of local-only mock/gallery data

## Linked Issues or Issue Description

Refs #9958.

No public GitHub issue exists for this branch. This is the catalog layer
for the Connections v3 stack after the schema-core foundation in #9958.

## What Changed

- Adds generated AppDefinition data for the Wave 1 catalog and ingestion
reporting.
- Replaces the legacy tool app gallery exports with
AppDefinition-centered shared contracts, validators, and tests.
- Updates server tool-access lookup behavior to use the AppDefinition
catalog.
- Updates app connection UI surfaces and tests to consume
AppDefinition-backed catalog data.
- Documents the catalog ingestion workflow in the connector playbook.

## Verification

- `pnpm run preflight:workspace-links`
- `pnpm exec vitest run packages/shared/src/app-definitions.test.ts
packages/shared/src/app-definitions-url.test.ts
ui/src/pages/apps/AppsConnect.test.tsx
server/src/__tests__/tool-access-service.test.ts`

## Risks

- Medium: this changes the catalog contract used by shared, server, and
UI app connection surfaces.
- Catalog data quality matters because generated definitions now drive
browse/setup display.
- Follow-up runtime and wizard PRs must rebase on this branch or on
master after this lands.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

OpenAI GPT-5 Codex coding agent with repository tool use.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-21 15:57:12 -05:00
DottaandPaperclip 7e00f67138 feat(connections): add v3 schema core (#9958)
## Thinking Path

> - Paperclip is the open source control plane people use to manage
AI-agent companies and their governed access to external systems.
> - Connected Apps build on the existing Apps and MCP gateway substrate
so companies can configure reusable, auditable integrations.
> - The current connection record does not yet have a stable public
address, explicit ownership/auth method fields, or subject-specific
credential grants.
> - Without that schema core, later OAuth, per-user authorization, token
brokering, triggers, and connector-service phases cannot enforce tenant
and subject boundaries consistently.
> - This pull request adds the forward-compatible Connections v3 schema
core while preserving the existing connection lifecycle and directly
migrating the remote MCP transport name.
> - The benefit is a company-scoped, least-privilege foundation for
one-click integrations without bypassing Paperclip secrets, profiles,
rules, or audit controls.

## Linked Issues or Issue Description

No matching public issue was found.

**Problem**

Paperclip's current app connections need a durable identity and
authorization substrate before Connected Apps can safely support
multiple setup methods, per-user credentials, provider tenants, and
managed connector services. The existing schema only models a single
connection-level credential set and uses legacy transport terminology.

**Proposed solution**

Add a stable company-scoped connection UID, explicit
ownership/auth/transport fields, a subject-aware `connection_grants`
table, and multi-key credential annotations. Backfill existing
connections and workspace grants in a reversible migration, then update
shared/server/UI contracts to the new `mcp_remote` transport name.

**Related work**

- Related foundation: #9534
- Roadmap: Connected Apps (one-click integrations)

## What Changed

- Added company-scoped connection `uid`, `ownership`, `authKind`, and
canonical transport fields across database, shared contracts,
validators, services, and UI fixtures.
- Added `connection_grants` with workspace/user subject rules, provider
tenant metadata, credential secret refs, revocation state, company
scoping, and uniqueness constraints.
- Added migration `0182_connections_v3_schema_core` to backfill stable
UIDs, rename `remote_http` to `mcp_remote`, infer auth kinds, create
default workspace grants, and support rollback coverage.
- Added multi-key credential annotations and updated gateway/access
services without changing the existing lifecycle behavior.
- Updated the connection glossary, connector playbook, and security
threat model for the new identity, grant, and relay boundaries.
- Added explicit test UIDs to direct database fixtures so the new
non-null invariant is exercised across affected server suites.

## Verification

- `pnpm --filter @paperclipai/shared typecheck`
- `pnpm --filter @paperclipai/db typecheck`
- `pnpm --filter @paperclipai/server typecheck`
- `pnpm --filter @paperclipai/ui typecheck`
- `pnpm exec vitest run server/src/__tests__/tool-access-service.test.ts
server/src/__tests__/tool-gateway-service.test.ts
server/src/__tests__/tool-gateway.test.ts
server/src/__tests__/heartbeat-runtime-skills.test.ts
server/src/__tests__/tool-oauth-legacy-backfill.test.ts
server/src/__tests__/tool-access-policy-service.test.ts
server/src/__tests__/heartbeat-runtime-mcp-servers.test.ts
packages/db/src/connections-v3-schema-core-migration.test.ts
packages/shared/src/validators/tool-access.test.ts --config
vitest.config.ts` — 9 files, 218 tests passed.
- Latest-head GitHub Actions: build, typecheck, general/serialized
suites, backup/worktree restore coverage, both e2e shards, canary,
policy, and security scans pass.
- Greptile: 5/5 with zero unresolved threads.
- `pnpm check:token-gates` remains red only on five pre-existing `#9627`
color literals outside this change.

## Risks

- **Migration risk:** UID backfill and default-grant creation touch
every existing connection. The migration uses company-scoped uniqueness,
deterministic legacy UIDs with ID suffixes, and seeded up/rollback
coverage.
- **Authorization risk:** Grant rows carry credential references.
Constraints enforce workspace-vs-user subject shape, company/connection
lookup indexes, one default grant per connection, and one user grant per
connection/subject. Security review is requested specifically for this
design.
- **Compatibility risk:** `remote_http` is renamed directly to
`mcp_remote`; all repository call sites and fixtures are updated in the
same change.
- **Future-phase risk:** Subject-bound token issuance, triggers, and
connector-service relay verification remain fail-closed requirements
documented for later phases; this PR does not expose those capabilities.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

OpenAI Codex CLI coding agent. The runtime did not expose an exact
underlying model ID or context-window size; capabilities used include
repository inspection, code editing, shell execution, test execution,
Git/GitHub CLI operations, and structured reasoning.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-21 15:16:26 -05:00
le-czs c1f6698ec5 fix(ui/invite): make pending-approval admin guidance non-clickable (#6786)
## Thinking Path

> - Paperclip orchestrates AI agents for zero-human companies, and
humans onboard into companies via invite links.
> - Some invite types (`company_join` with
`requires_company_admin_approval`) require an admin to approve the join
request after the invitee submits it.
> - While the requester waits, the invitee sees the
`AwaitingJoinApprovalPanel` in `InviteLanding`, which describes where
the admin needs to go to approve the request.
> - That panel rendered the destination — "Company Settings → Access" —
as two clickable `<a href="/company/settings/access">` links, even
though the surrounding copy is plainly addressed to the admin ("Ask
**them** to visit ..."), not the requester.
> - First-time invitees naturally click the only underlined link on the
screen, are sent to `/company/settings/access`, hit the "No company
access" panel (they have no membership yet), and conclude the invite
flow is broken.
> - This PR removes the navigation by rendering both "Company Settings →
Access" references as plain styled text (`<p>` / `<span>`), so the
guidance stays visible but cannot be followed by the requester.
> - The benefit is that the post-submit invite experience matches the
copy's intent — guidance for the admin, not navigation for the
requester.

Fixes #6784.

## What Changed

- `ui/src/pages/InviteLanding.tsx` — In `AwaitingJoinApprovalPanel`,
replace the two `<a href={approvalUrl}>Company Settings → Access</a>`
elements with `<p>` and `<span>` containing the same text. Remove the
now-unused `approvalUrl` constant.
- `ui/src/pages/InviteLanding.test.tsx` — Update the existing "pending
approval page" test: it previously asserted two anchor tags pointing at
`/company/settings/access`; it now asserts **zero** anchors while the
text "Company Settings → Access" still appears twice (in the "Approval
page" box and inline in the "Ask them to visit ..." sentence). Renamed
the test description from "...linked access instructions" to
"...non-clickable access instructions" to reflect the contract.

## Verification

```
pnpm vitest run ui/src/pages/InviteLanding.test.tsx
```

Result: 8 / 8 pass, including the updated "shows the pending approval
page with the company icon and non-clickable access instructions" case.

Manual reproduction (master @ `242a2c2f`,
`deploymentMode=authenticated`, `bind=lan`, embedded Postgres):

1. As instance admin, generate a `company_join` invite that requires
admin approval.
2. In a fresh browser profile, open the invite link.
3. Fill **Create your account** and submit.
4. The "Request to join \<company\>" panel appears.
5. Hover the "Company Settings → Access" mentions — no underline, no
link cursor; clicking does nothing. The text is still readable and the
surrounding copy ("Ask them to visit ...") still conveys the instruction
to the requester.

Before / after screenshots: see issue #6784 — the "before" state lands
users on `/company/settings/access` which renders "No company access".
After this PR the guidance is informational only.

## Risks

Low. UI-only change confined to one function in `InviteLanding.tsx` plus
its matching test. No API contracts, routes, or data shapes are
modified. The removed `approvalUrl` constant was only referenced by the
two anchor elements.

## Model Used

- Anthropic Claude Opus 4.7 (`claude-opus-4-7`, 1M context, extended
thinking enabled).
- Tools: file editing, Bash, Playwright reproduction against a
self-hosted Paperclip instance running master @ `242a2c2f`, and the
Paperclip monorepo's own Vitest suite for verifying the test update.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [ ] If this change affects the UI, I have included before/after
screenshots (will attach in PR thread)
- [x] I have updated relevant documentation to reflect my changes (no
docs files needed updating)
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge
2026-07-21 10:22:17 -07:00
DottaandPaperclip 59eee4829c fix(inbox): stop archived items from resurfacing (#9931)
## Thinking Path

> - Paperclip is the control plane operators use to coordinate AI-agent
companies and review work needing attention.
> - The Inbox is the operator-facing surface that aggregates tasks
requiring attention across server state and shared client polling.
> - Archiving a task optimistically removed it, but ordinary background
activity and stale polling responses could make it reappear seconds
later.
> - The server therefore needs to distinguish genuine user-attention
events from routine agent/system activity.
> - The client also needs a bounded local archive guard across every
Inbox query path while the server mutation and in-flight polls settle.
> - This pull request fixes both resurrection paths and adds
race-focused regression coverage.
> - The benefit is stable archive behavior without hiding a genuine
archive failure after reconciliation or reload.

## Linked Issues or Issue Description

### Pre-submission checklist

- [x] Searched existing open and closed issues and pull requests; no
duplicate implementation was found.
- [x] Reproduced on `master` before this branch.
- [x] Confirmed this is a Paperclip core bug, not adapter or provider
behavior.

### What happened?

Archiving an Inbox task hid it optimistically, then background refresh
activity could insert it back into the list seconds later.

### Expected behavior

A successfully archived task remains hidden during normal polling. A
genuine failed archive may become visible again after reconciliation or
reload.

### Steps to reproduce

1. Open Inbox with a visible task.
2. Archive the task.
3. Wait for shared polling or routine agent activity to refresh task
data.
4. Observe the archived task reappear without a hard page refresh.

### Paperclip version or commit

`master` before this branch.

### Deployment mode

Built from source using the local development application.

### Installation method

Built from source (`pnpm`).

### Agent adapter(s) involved

Not adapter-specific; this is a core Inbox bug.

### Database mode

Not database-mode-specific.

### Access context

Board (human operator).

### Additional context

The failure had independent server and client causes: routine activity
could resurface archived rows server-side, while stale shared-poll
responses could bypass optimistic client removal.

## What Changed

- Restrict server-side Inbox resurfacing to explicit user-attention
events rather than any issue activity write.
- Add a bounded client-side archive guard with confirmation, failure
restoration, and cache reconciliation behavior.
- Apply the guard to Inbox rendering, badge counts, optimistic cache
updates, and shared-poll result application.
- Classify the generic compact Inbox query so stale shared-poll data
cannot bypass the guard.
- Add server visibility-matrix tests and UI race-condition regression
tests.

## Verification

- `pnpm --filter @paperclipai/ui exec vitest run
src/hooks/useSharedPolling.test.ts src/lib/inboxArchiveCache.test.ts
src/pages/Inbox.test.tsx` — 25 passed.
- `pnpm --filter @paperclipai/server exec vitest run
src/__tests__/issues-service.test.ts` — 107 passed.
- Branch rebased cleanly onto current `origin/master` before push.

## Risks

- Low-to-moderate behavioral risk: resurfacing is intentionally
narrower, so the server tests cover human comments, mentions,
interactions, and status transitions that must still regain attention.
- The client guard is bounded and cleared on mutation failure, limiting
the risk of hiding a task whose archive did not persist.
- No schema, migration, public API, workflow, dependency-lock, or
visual-token changes.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- Anthropic Claude via Claude Code (`claude_local`; prior
implementation/review run, exact underlying model ID and context window
were not retained in the handoff metadata), with repository tool use and
test execution.
- OpenAI `gpt-5.5` via Codex CLI for final review repair and PR
preparation, with reasoning, repository editing, GitHub tooling, and
code execution.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and
linked/described the result above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change and contains no internal
Paperclip task identifier
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation where needed; no
documentation change is required for this bug fix
- [x] I have considered and documented risks above
- [x] All Paperclip-authored commits include the required co-author
trailer

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-21 08:13:14 -05:00
DottaandPaperclip 26890650b2 test(ui): cover secret creation within folders (#9927)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - The Secrets UI lets operators navigate slash-delimited secret names
as folders
> - PR #9913 shipped create-in-folder behavior for company and per-user
secrets
> - The production behavior is already on master, but several
create-in-folder interaction paths lack retained regression coverage
there
> - Without that coverage, prefix composition, derived keys, prefix
removal, and staged empty folders could regress unnoticed
> - This pull request adds focused render tests without changing
production behavior
> - The benefit is safer maintenance of the folder-based secrets
workflow with a small, reviewable patch

## Linked Issues or Issue Description

- Refs #9913

## What Changed

- Added render coverage for creating a company secret from a folder and
deriving its key from the full slash-delimited name.
- Added coverage for per-user secret prefixes and exposing the full name
when the prefix chip is removed.
- Added coverage for inline folder-name validation and URL-backed
staging of an empty folder.

## Verification

- `env -u PAPERCLIP_IN_WORKTREE -u PAPERCLIP_WORKTREE_NAME -u
PAPERCLIP_CONFIG -u PAPERCLIP_HOME -u PAPERCLIP_INSTANCE_ID -u
PAPERCLIP_CONTEXT pnpm exec vitest run
ui/src/pages/Secrets.render.test.tsx` — 29 tests passed.
- `pnpm check:token-gates` — reports five existing `#9627` literals in
unrelated files; this PR changes no token-gated component code and
introduces no new violation.

## Risks

- Low risk: test-only change with no production, API, schema, migration,
dependency, or runtime behavior changes.
- The tests exercise existing DOM interactions and may need updates if
the Secrets creation UI copy or controls intentionally change.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex CLI managed coding agent with repository inspection, code
execution, Git/GitHub, and Paperclip API tools. The managed harness does
not expose the exact underlying model ID or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [ ] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
— the assigned execution branch name is fixed by the task
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes — no
documentation change is needed for test-only coverage
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-21 08:08:55 -05:00
DottaandPaperclip b9f4073a13 fix(ui): use searchable agent picker for secret access (#9918)
## Thinking Path

> - Paperclip is the control plane people use to manage AI-agent
companies.
> - Operators need to grant secrets to specific agents safely and
efficiently.
> - The secrets access sheet previously used a native select while
similar agent-assignment surfaces use a searchable picker.
> - That inconsistency makes finding an agent slow and error-prone as
companies grow.
> - This pull request reuses the shared agent picker behavior for
single-agent secret access grants.
> - The benefit is a consistent, searchable selection experience without
changing secret-access semantics.

## Linked Issues or Issue Description

Refs #9797

**Problem / motivation:** The in-sheet agent access form introduced in
#9797 renders every grantable agent in a native select. In companies
with many agents, operators cannot filter by name or title and the
experience differs from other agent-selection surfaces.

**Proposed solution:** Add a single-select variant beside the existing
`AgentMultiSelect`, then use it in the secret access grant form.

**Alternatives considered:** Keeping a native select would preserve less
code but would not scale or align with existing searchable agent
selection.

**Roadmap alignment:** This is a focused usability fix for an existing
core control-plane surface and does not overlap an unstarted roadmap
initiative.

## What Changed

- Added `AgentSelect`, a searchable single-agent popover that filters by
agent name and title.
- Replaced the secret access form's native select with the shared
searchable picker.
- Added focused coverage for filtering, selecting, callback behavior,
and popover closure.

## Verification

- `pnpm exec vitest run ui/src/components/AgentMultiSelect.test.tsx` —
passes (3 tests).
- `pnpm --filter @paperclipai/ui typecheck` — passes.
- `pnpm check:token-gates` — branch adds no violations; the command
currently fails on five unchanged `#9627` literals already present on
`master`.
- Manual: open Secrets, choose a secret, add agent access, filter by
agent name or title, select the result, and grant access.

## Risks

- Low risk: the change is limited to agent selection UI and preserves
the existing grant request payload.
- The new picker depends on the existing popover/input primitives and
resets its filter when closed.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex, GPT-5-series coding agent (exact runtime model ID and
context-window size are not exposed), with reasoning, repository tool
use, terminal execution, and GitHub CLI capabilities.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-20 18:00:34 -05:00
b94907f8af feat(ui): navigate slash-named secrets as folders (#9913)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Operators store company and user secrets under human-readable names
> - Slash-delimited names already express useful hierarchy, but the
Secrets page previously rendered them as one flat list
> - Large secret collections therefore became harder to scan, navigate,
and create within consistently named groups
> - A client-derived folder model preserves the existing server contract
while making those names navigable
> - This pull request adds folder browsing, URL-addressable paths,
global search, and create-in-folder behavior without adding folder
records
> - The benefit is a more scalable secrets workflow with no migration or
API compatibility risk

## Linked Issues or Issue Description

Slash-delimited secret names such as `dev/github/oauth/clientid`
currently appear as raw flat rows. This change treats name prefixes as
client-side navigation folders on the main Secrets tab while leaving
stored names, API contracts, validation, and the database unchanged.

- Wireframes and interaction specification:
https://pages.paperclip.ing/pap-14698-secrets-folders/
- Folder paths are derived only from secret names; there is no
server-side folder entity or data-model change.

## What Changed

- Added pure secret-path utilities for normalized segments, breadcrumbs,
nested folder listings, counts, and leaf/path rendering.
- Added a Folders/Flat view to the main Secrets tab with folder-first
sorting, breadcrumbs, empty-folder states, filters, and global search
results.
- Added URL navigation through `?path=<normalized/path>` so deep links,
reload, browser Back, and new-tab folder navigation work.
- Persisted the preferred view in `localStorage` under
`paperclip.secrets.viewMode`; an explicit `?path=` deep link takes
precedence for that visit.
- Added create-in-folder behavior with a removable prefix chip, staged
New folder paths, inline segment validation, and full-name key
derivation.
- Kept My secrets flat while rendering slash-delimited names with muted
paths and emphasized leaves.
- Added unit/render coverage for path helpers, folder navigation, and
create-in-folder behavior.

## Verification

- `pnpm exec vitest run ui/src/pages/secrets/secret-path.test.ts
ui/src/pages/Secrets.render.test.tsx` — 35 tests passed.
- `pnpm -r typecheck` — passed.
- `pnpm test:run` — server suite passed 2,707 tests and UI suite passed
3,022 tests; one unrelated CLI doctor test was environment-sensitive
because this agent inherited AWS variables.
- `env -u AWS_PROFILE -u AWS_ACCESS_KEY_ID -u AWS_SECRET_ACCESS_KEY -u
AWS_SESSION_TOKEN -u AWS_REGION -u AWS_DEFAULT_REGION pnpm exec vitest
run cli/src/__tests__/secrets.test.ts` — 8 tests passed.
- `pnpm build` — passed.
- `pnpm check:token-gates` — feature files are clean; the command
reports five existing `#9627` color literals outside this diff.

## Risks

- Low data risk: folders are derived client-side from existing names,
with no schema, migration, API, or stored-name changes.
- URL behavior changes only the main Secrets tab and uses the additive
`?path=` contract.
- View preference is browser-local and scoped to the
`paperclip.secrets.viewMode` key.
- Renaming or deleting the last secret under an open prefix
intentionally leaves the user on an empty-folder state instead of
redirecting.
- “Move to folder…” bulk prefix rename remains deferred because it is a
multi-secret mutation with separate conflict and partial-failure
semantics.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI `gpt-5.5` via Codex CLI for PR preparation, verification,
GitHub/Paperclip tool use, and codebase analysis; the managed harness
does not expose the active context-window size.
- Anthropic Claude Opus 4.8 (1M context) and Claude Fable 5 assisted
earlier implementation/design commits, as recorded in their commit
trailers; both used repository and code-editing tools.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [ ] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
— the assigned shared execution branch name is fixed for this work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Claude Fable 5 <noreply@anthropic.com>
Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-20 16:11:35 -05:00
f12bb27bcd feat: make issue monitors visible across task surfaces (#9783)
## Thinking Path

> - Paperclip is the open source control plane people use to supervise
AI-agent companies.
> - Operators need task execution state to be visible where they read,
reply to, and manage an issue.
> - Scheduled monitor state was easy to miss because it lived in a
description-area card and used inconsistent, mostly static time copy.
> - The task page, composer, retry card, and properties panel therefore
needed one shared monitor-state and countdown language.
> - This pull request adds shared live-ticking time utilities, moves
monitor status into a top-of-page banner and composer strip, and
redesigns the properties row with complete read-only details.
> - The benefit is that operators can immediately understand when an
agent resumes, why it is waiting, and how to act without hunting across
the page.

## Linked Issues or Issue Description

Issue monitors can schedule a future agent check, retry, or wake, but
the UI did not present that state consistently or prominently. The
existing description-area activity card competed with issue content, the
composer did not explain that replying wakes the agent early, compact
properties copy truncated important details, and relative times did not
share a live two-unit formatter.

This change makes scheduled monitor state visible and consistent across
the issue header, reply composer, properties panel, and scheduled-retry
card. Related prior server-side recovery visibility work: #9629
(distinct scope).

## What Changed

- Added shared two-unit monitor ETA/offset formatters and a live-ticking
countdown hook, including compact absolute-time rules for Today,
weekday, and cross-year dates.
- Replaced the description-area monitor activity card with a top-of-page
status banner and added an inline composer strip that explains replies
wake the agent before the scheduled check.
- Redesigned the properties Monitor row as readable two-line copy with
attempt state, due/overdue/cleared wording, click-to-edit behavior, and
a hover/tap details tooltip.
- Adopted the shared two-unit formatting in the scheduled-retry card and
added focused coverage for monitor formatting, state transitions,
visibility, and controls.
- Added the approved wireframe package and published reference:
https://pages.paperclip.ing/pap-14557-monitor-visibility/

## Verification

- `pnpm vitest run ui/src/lib/issue-monitor.test.tsx
ui/src/components/IssueMonitorBanner.test.tsx
ui/src/components/IssueProperties.test.tsx` — 3 files, 74 tests passed.
- `pnpm -r typecheck` — passed.
- `pnpm build` — passed with existing Vite optimization/chunk-size
warnings.
- UX review approved the rendered real components across desktop/mobile,
light/dark, and the scheduled/retrying/due/overdue/cleared/none state
matrix.
- QA passed 6/6 criteria in Chromium, including a live countdown
transition without refresh. Review evidence included the P2 banner
state-matrix screenshot and the P3 properties-row and details-tooltip
screenshots, plus a dark-mode capture.
- `pnpm check:token-gates` currently reports five pre-existing `#9627`
comment literals on `origin/master`; this branch introduces none of
those literals or any new token violation.

## Risks

- Low-to-moderate UI behavior risk: monitor copy and placement change
across several issue surfaces, but all derive from one shared state
builder and focused tests cover the state matrix.
- Countdown rendering wakes once per minute while a visible monitor is
scheduled; the hook is limited to active monitor surfaces and stops when
hidden.
- No database, API contract, migration, telemetry, or authorization
behavior changes.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex, `gpt-5.6-sol`; context-window metadata was unavailable
in this runtime; reasoning, repository tool use, command execution, and
test execution enabled. Earlier implementation commits were assisted by
Claude Fable 5 and Claude Opus 4.8 (1M context), as credited in their
commit trailers.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Claude Fable 5 <noreply@anthropic.com>
Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-18 14:39:37 -05:00
67616dd7ea Rework secrets dialog and add in-sheet agent access (#9797)
## Thinking Path

> - Paperclip is the open source control plane people use to manage AI
agents and the credentials those agents need for work.
> - The secrets UI is responsible for making credential creation
understandable and for showing where credentials are used.
> - The create flow previously exposed an editable generated key too
early, used an unnatural field order, and rendered uneven provider tab
rows.
> - The detail sheet also lacked an in-context way to see and manage
which agents reference a selected secret.
> - This pull request makes the create dialog follow a predictable
name-to-value flow and adds agent access management directly to the
secret details sheet.
> - The benefit is a clearer secrets workflow with fewer accidental key
edits and less navigation when granting or revoking agent access.

## Linked Issues or Issue Description

**Subsystem affected:** `ui/` — React + Vite board UI

**Problem or motivation:** Creating a secret currently makes its
generated key look immediately editable, places fields in an awkward
keyboard order, and applies provider-tab overrides that produce uneven
rows. After creation, operators cannot inspect or change agent access
from the selected secret's detail sheet.

**Proposed solution:** Generate the key from the path-style name and
keep it read-only until an explicit Edit action; place Value directly
after Name; use the standard tab sizing; and add an Agent access section
that reads and updates `secret_ref` / `user_secret_ref` environment
bindings through agent adapter configuration.

**Alternatives considered:** Keeping access management only on agent
configuration screens was rejected because it hides a secret-centric
question—“which agents can use this?”—and requires repetitive
navigation. Keeping the key always editable was rejected because the
generated value should be the safe default.

**Roadmap alignment:** No matching item was found in `ROADMAP.md`; this
is a focused usability and access-management improvement to the existing
secrets surface.

**Additional context:** GitHub search found no duplicate PR for this
dialog and in-sheet access change. PR #9321 also mentions user-secret
resolution but addresses unrelated skills-route behavior.

## What Changed

- Auto-generate the create-secret key from Name, keep it read-only by
default, and expose an explicit Edit action.
- Use a path-style Name placeholder (`/dev/foo/bar`) and place Value
immediately after Name for natural keyboard navigation.
- Remove tab sizing/whitespace overrides that caused uneven provider-tab
row heights.
- Add an Agent access section to the Details tab that lists referencing
agents and grants or revokes `secret_ref` / `user_secret_ref`
environment bindings in place.
- Cover company secrets and each-user definitions with focused render
tests.

## Verification

- `pnpm exec vitest run ui/src/pages/Secrets.render.test.tsx` — 17/17
passed.
- `pnpm --filter @paperclipai/ui typecheck` — passed.
- `pnpm check:token-gates` — changed files are clean; the
repository-wide command currently reports five pre-existing `#9627`
violations in unrelated files (`Sidebar.tsx`, `Inbox.tsx`,
`IssueDetail.tsx`, `Issues.tsx`, and `Routines.tsx`).
- Additional secrets verification completed during implementation: 35/35
adjacent secrets tests passed, and the flow was checked in a real
browser in light and dark themes.

## Risks

- Agent access mutations update adapter environment configuration, so
malformed legacy env entries could affect how a binding is displayed or
revoked.
- Each-user definitions use `user_secret_ref` rather than `secret_ref`;
focused tests cover selecting the correct binding type.
- No database or API contract changes are included.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- Anthropic Claude Fable 5 assisted with the implementation using
repository-aware code editing and test execution.
- OpenAI GPT-5.5 via Codex CLI assisted with PR preparation, branch
hygiene, focused verification, GitHub operations, and review/check
loops.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Claude Fable 5 <noreply@anthropic.com>
Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-18 14:39:06 -05:00
DottaandPaperclip 051ae4d102 feat: restore decision training library and inspector (#9779)
## Thinking Path

> - Paperclip is the open source control plane people use to manage
AI-agent companies and supervise governed work.
> - Decisions capture high-value operator judgment, and the
decision-training foundation merged in #9702 freezes that evidence for
later evaluation and learning.
> - Operators still need the UI from the closed stacked PR #9718 to
intentionally capture examples and inspect the resulting dataset.
> - GitHub automatically closed #9718 when its stacked base branch was
deleted after #9702 merged, leaving the server foundation on `master`
without the corresponding UI.
> - This pull request restores the final UI and its still-required
supporting API fields directly on current `master`, while excluding the
obsolete migration and duplicated server-foundation diffs.
> - The benefit is a reviewable replacement PR that preserves the
completed decision-training workflow without replaying stale stack
history.

## Linked Issues or Issue Description

- Refs #9718
- Refs #9702

## What Changed

- Restored the top-level `/training` library and record inspector with
search, filters, JSONL export, notes editing, and evidence tabs.
- Restored the Decisions-row training affordance and capture drawer,
including preview, provenance, deletion, cache refresh, and approval
consistency behavior.
- Restored the shared types and focused server support needed by the UI
without reintroducing decision-training migrations or the already-merged
server foundation.
- Restored focused UI and attention-service tests from the final #9718
state.
- Credit to the authors and reviewers of #9718; this recovery
transplants their final reviewed delta after the stacked base deletion.

## Verification

- `pnpm exec vitest run ui/src/pages/Training.test.tsx
ui/src/components/DecisionTrainingDrawer.test.tsx
ui/src/components/AttentionQueueRow.test.tsx
server/src/__tests__/attention-service.test.ts
server/src/__tests__/decision-training.test.ts` — 5 files, 48 tests
passed.
- `pnpm --filter @paperclipai/shared typecheck` — passed.
- `pnpm --filter @paperclipai/server typecheck` — passed.
- `pnpm --filter @paperclipai/ui typecheck` — passed.
- `pnpm exec vitest run server/src/__tests__/openapi-routes.test.ts` — 3
tests passed; confirms exact route/OpenAPI parity for the restored
preview endpoint.
- `pnpm check:token-gates` — the restored files are clean; the
repository-wide command currently reports five pre-existing false
positives where comments reference GitHub issue `#9627` as if it were a
color literal.

## Risks

- Low migration risk: this PR contains no database migrations and is
based directly on current `master`.
- The main behavioral risk is cache invalidation across Decisions and
Training views; focused tests cover capture, update, deletion, row
state, and approval refresh behavior.
- The token-gate baseline remains red on unrelated `#9627` comment
references; this PR does not modify those files.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex, GPT-5.3-Codex, reasoning with repository/tool access and
code execution. Context window not exposed by the runtime.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-17 13:27:32 -05:00
1f1f545238 feat: add built-in summarizer and summary slots (#9713)
## Thinking Path

> - Paperclip is the open source control plane people use to organize,
govern, and understand AI-agent work
> - Operators need concise, current status views across projects and
execution workspaces without manually reading every issue and run
> - Paperclip already has auditable issues, documents, built-in agents,
routines, and live run events, but no first-class summary-slot workflow
connecting those systems
> - A built-in Summarizer can generate status prose through ordinary
governed tasks while summary slots provide stable, revisioned
destinations for that output
> - The UI needs to show current summaries, generation progress,
failures, revisions, and streaming draft status in the places operators
already work
> - This pull request adds the end-to-end summary-slot data, API, agent,
orchestration, and UI surfaces behind an experimental setting
> - The benefit is decision-oriented status context that remains
company-scoped, auditable, retryable, and inexpensive by default

## Linked Issues or Issue Description

No public GitHub issue exists for this feature.

**Problem**

Operators currently have to reconstruct project and workspace status by
reading many issues, runs, and comments. This makes it hard to identify
decisions, review queues, recent work, and the next event worth
watching.

**Proposed capability**

Add an experimental summary system with revisioned summary slots for
projects and workspaces, a paused-by-default built-in Summarizer agent,
governed generation tasks, live draft status, and reusable UI cards.

**Expected behavior**

- Summary data remains company-scoped and revisions remain auditable.
- Generation runs through normal issue/agent orchestration and
deduplicates active requests.
- Only the linked built-in Summarizer generation task can author a slot
revision.
- Operators can generate, retry, inspect revisions, and follow draft
progress from project and workspace views.
- The feature remains opt-in and background generation remains paused by
default.

## What Changed

- Added summary-slot schema, idempotent migrations, shared contracts,
validators, API paths, and service tests.
- Added company-scoped summary-slot routes for reading revisions,
requesting generation, and guarded Summarizer writes with activity
logging.
- Added terminal generation finalization, failure reasons, assignment
wakeups, and orchestration integration.
- Added the paused-by-default built-in Summarizer bundle, low-cost
runtime defaults, status-summarization skill, and stale-summary routine.
- Added summary cards, revision selection, retry/configuration states,
live draft streaming, transcript chunk handling, and project/workspace
integrations.
- Updated Claude local parsing for streamed status output and expanded
server, adapter, shared, database, catalog, and UI coverage.

## Verification

- `pnpm -r typecheck`
- `pnpm exec vitest run packages/db/src/summary-slots-schema.test.ts
packages/shared/src/summary-slot.test.ts
server/src/__tests__/summary-slot-routes.test.ts
server/src/__tests__/summary-slots.test.ts
server/src/__tests__/built-in-agents.test.ts
ui/src/components/SummarySlotCard.test.tsx
ui/src/components/SummarySlotCard.status.test.tsx
ui/src/components/useSummaryDraftStream.test.tsx
ui/src/lib/summary-draft-stream.test.ts
ui/src/lib/run-log-chunks.test.ts
ui/src/context/LiveUpdatesProvider.hook.test.tsx` — 113 tests passed
- `pnpm test:run` — server and UI suites passed; one CLI AWS doctor test
was affected by inherited `AWS_ACCESS_KEY_ID`/`AWS_SECRET_ACCESS_KEY`,
and passed when those host credentials were removed
- `pnpm exec vitest run cli/src/__tests__/secrets.test.ts` with
inherited AWS credential variables removed — 8 tests passed
- `pnpm build`
- `pnpm check:token-gates` currently reports nine `#9627` comment
references introduced by current `master`; none are in this PR diff

## Risks

- Database risk is limited by incrementally ordered, idempotent
migrations and migration safety checks.
- Summary generation creates normal issues/runs, so misconfiguration can
produce failed slots; the UI exposes retryable failure reasons and agent
configuration entry points.
- Streaming draft parsing depends on the documented `STATUS:` protocol;
final persisted revisions remain the source of truth.
- The feature is experimental, opt-in, and its built-in routine is
paused with no background token spend by default.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI GPT-5.3 Codex with reasoning, repository tool use, code
execution, GitHub CLI, and Paperclip control-plane integration. Earlier
branch commits also record Claude model co-authorship where applicable.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>
2026-07-17 11:03:07 -05:00
DottaandPaperclip 009410164f Fix inbox unread badge alignment (#9685)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - The Inbox lets operators scan task state and distinguish unread
activity at a glance
> - Read and unread rows should keep the same status-and-title alignment
so the list remains easy to scan
> - The mark-read dot previously participated in flex layout, which
added an extra leading column and visibly indented unread rows
> - Parent rows also needed special handling because their collapse
chevron occupies the normal leading gutter
> - This pull request moves the unread dot out of desktop flex flow,
preserves a consistent leading spacer, and positions parent-row dots
after the chevron
> - The benefit is consistent alignment for read, unread, leaf, nested,
and collapsible parent rows without hiding tree controls

## Linked Issues or Issue Description

### What happened?

In the Inbox, an unread row rendered its status icon and title farther
right than an equivalent read row because the mark-read dot occupied its
own flex column. On a collapsible parent row, the dot also competed with
the leading chevron.
### Expected behavior

Read and unread Inbox rows keep identical status/title alignment while
preserving the unread affordance and any tree-expansion controls.
### Steps to reproduce

  1. Run Paperclip from `master` and open the Inbox at desktop width.
  2. Compare otherwise-equivalent read and unread leaf rows.
  3. Expand a task tree containing an unread depth-zero parent.
4. Observe the unread row indentation and the dot competing with the
parent chevron.
### Paperclip version or commit

Reproduced against the pre-fix `master` parent of this PR.
- **Deployment mode:** Local dev (`pnpm dev`).
- **Installation method:** Built from source.
- **Agent adapters involved:** Not adapter-specific; this is a core
Inbox UI bug.
- **Database mode:** Not database-related.
- **Access context:** Board (human operator).
- **Additional context:** No logs or configuration are involved; the
regression is visual layout behavior covered by focused component/page
tests.

## What Changed

- Render the desktop unread dot as an absolute overlay so it does not
consume row width; retain the existing in-flow behavior on mobile.
- Add an `unreadDotPlacement` option so depth-zero collapsible parents
place the dot after the leading chevron.
- Reserve the same leading spacer for read and unread non-chevron Inbox
rows.
- Expand `IssueRow` and Inbox tests to cover leaf alignment, nested
rows, parent chevrons, fading state, and mobile behavior.

## Verification

- `pnpm exec vitest run ui/src/components/IssueRow.test.tsx
ui/src/pages/Inbox.test.tsx` — 2 files, 30 tests passed.
- `pnpm check:token-gates` — all three token gates clean across 630
scanned files.
- Browser QA (desktop 1280px and mobile 375px) — PASS: read/unread
desktop content measured at identical x positions; nested guides, parent
chevron hit target, fading state, and mobile mark-read hit targets
verified.

## Risks

- Low risk: the change is isolated to Inbox row presentation and has
focused regression coverage.
- The main visual risk is breakpoint-specific placement of the mark-read
dot; tests explicitly cover desktop absolute positioning and mobile
in-flow positioning.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex `gpt-5.6-sol`, high reasoning effort, with
repository/tool execution. The runtime did not expose a context-window
size.
- Original implementation commit also records assistance from Claude
Opus 4.8.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-17 09:20:44 -05:00
5d42382df4 feat(ui): stabilize workspace service controls (#9705)
## Thinking Path

> - Paperclip is the open source control plane people use to coordinate
AI-agent work.
> - Execution workspaces provide the local service loop where operators
start, stop, restart, inspect, and open workspace services.
> - The existing header exposed those actions through separate controls
whose position and labeling changed across runtime states.
> - That movement made the most common development actions harder to
scan and easier to misclick, especially with multiple services or long
URLs.
> - The design therefore uses one fixed-geometry, state-aware control
bar and keeps service-specific detail behind a compact disclosure.
> - This pull request adds that control surface, maps existing runtime
data and every pending mutation into it, and integrates it into the
execution-workspace header without changing server contracts.
> - The benefit is a calmer, predictable service-control loop across
stopped, transitional, running, unhealthy, failed, multi-service, and
narrow-width states.

## Linked Issues or Issue Description

### Subsystem affected

`ui/ — React + Vite board UI`

### Problem or motivation

Execution-workspace service actions move and change shape as runtime
state changes, while URLs and multi-service status compete for header
space. During bulk actions, operators also need every targeted service
to show its transitional state immediately.

### Proposed solution

Use one fixed-geometry, state-aware service control bar in the workspace
header. Map existing runtime records into a stable status, URL, and
actions model, and track each in-flight bulk request independently until
it settles.

### Alternatives considered

Keeping the separate quick-control buttons was rejected because their
geometry changes by state. Showing every service inline was rejected
because it makes the header too wide; per-service detail remains in a
compact disclosure and the Services tab.

### Roadmap alignment

Reviewed `ROADMAP.md`; this focused execution-workspace UI improvement
does not duplicate a listed roadmap initiative.

### Additional context

The published design and state viewer is available at
https://pages.paperclip.ing/pap-14233-workspace-service-controls/.

## What Changed

- Added `WorkspaceServiceControlBar`, a fixed-geometry responsive
control for single- and multi-service runtime states.
- Added 15 Storybook states covering running, stopped, transitions,
unhealthy, failed, disabled, long-URL, mobile, and multi-service
behavior.
- Replaced `WorkspaceRuntimeQuickControls` in the execution-workspace
header with adapters that map live services and all pending requests
into the new control model.
- Added focused unit coverage for service-entry construction, bulk
pending overlays, request resolution, clipboard feedback, and header
integration.

## Verification

- `cd ui && NODE_ENV=development pnpm vitest run
src/components/WorkspaceServiceControlBar.test.tsx
src/components/WorkspaceRuntimeControls.test.tsx
src/pages/ExecutionWorkspaceDetail.test.tsx` — 29 tests passed.
- `NODE_ENV=development pnpm --dir ui typecheck` — passed.
- `pnpm check:token-gates` — all token gates clean.
- Reviewed the Storybook captures for all primary states.

## Risks

- Low-to-moderate UI risk: service controls depend on adapter mapping
from existing runtime records; focused tests cover single-service and
bulk-action mapping and integration paths.
- Multi-service bulk actions intentionally apply to all eligible
services, while per-service actions remain in the disclosure.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex, exact model ID `gpt-5.3-codex`; runtime-managed context
window; coding/reasoning mode with repository, terminal, Git, GitHub
CLI, and test execution tools.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Claude Fable 5 <noreply@anthropic.com>
Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-16 21:07:04 -05:00
DottaandPaperclip a015ac7a57 fix(ui): allow interrupting queued issue runs (#9725)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - The issue detail chat lets operators send messages while an issue
run is live
> - Messages sent during a live run are shown as queued and can expose
an interrupt action
> - The UI only treated running runs as interruptible, even though
queued runs can also own the pending message
> - That mismatch hid the interrupt button after sending a message while
the agent run was still queued
> - This pull request treats queued and running issue runs as
interruptible and preserves the exact target run on optimistic and
persisted comments
> - The benefit is that operators can immediately interrupt the queued
run their message is waiting behind

## Linked Issues or Issue Description

- **What happened:** Sending a message while an issue-owned agent run
was in `queued` state showed the message as pending but did not make the
interrupt action available.
- **Expected behavior:** A message queued behind either a queued or
running issue run should retain that run as its interrupt target and
expose the interrupt control.
- **Steps to reproduce:** Open an in-progress issue with an issue-owned
run still queued, send a chat message, and inspect the queued message
actions.
- **Version/commit:** Reproduced against the pre-change `master` UI
behavior.
- **Deployment mode:** Paperclip board UI with a queued issue execution
run.

## What Changed

- Generalized issue-run resolution from running-only to
queued-or-running interruptible runs.
- Used the interruptible run consistently for optimistic queue metadata,
persisted comment decoration, cancel controls, and targeted
interruption.
- Added a regression test that sends a message behind a queued run and
verifies the exact run is cancelled.

## Verification

- `pnpm exec vitest run ui/src/pages/IssueDetail.test.tsx` — 44 tests
passed.
- `pnpm --filter @paperclipai/ui typecheck` — passed.
- `pnpm check:token-gates` — repository-wide gate currently reports nine
pre-existing `#9627` comment literals; this patch adds no token literals
or gate violations.

## Risks

- Low risk: the behavior change is limited to selecting queued
issue-owned runs as valid interrupt targets in the existing chat flow.
- Cancellation remains targeted by run ID, and the regression test
verifies the queued run ID is preserved through optimistic and persisted
comment states.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI `gpt-5.4` via Codex CLI; context-window size is not exposed by
this runtime; reasoning-enabled with repository, shell, GitHub CLI, and
code-execution tools.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-16 16:55:51 -05:00
59fb27ff79 feat(inbox): let agents safely tidy user inboxes (#9724)
## Thinking Path

> - Paperclip is the open source control plane people use to manage
AI-agent companies and their work
> - The inbox is a per-user attention view, so archiving an item must
not alter the underlying issue, assignment, or status
> - Agents can help responsible users tidy resolved work only when the
action is company-scoped, reversible, policy-controlled, and fully
attributable
> - The database and authorization foundations landed in #9654 and
#9658, but the end-to-end archive routes, audit details, agent workflow
guidance, and operator UI still need to ship together
> - Separate stacked PRs #9659 and #9661 made the complete behavior
harder to review and land as one coherent capability
> - This pull request consolidates the remaining server,
shared-contract, documentation, skill, and UI work on top of current
master
> - The benefit is a single reviewable change that lets agents safely
archive responsible-user inbox items and lets users control or undo that
behavior

## Linked Issues or Issue Description

### Subsystem affected

Cross-cutting inbox management across shared contracts, server
authorization/routes/services, shipped agent skills, and the board UI.

### Problem or motivation

Agents may complete work whose issue remains in the responsible user's
Mine inbox. Existing board-user archive behavior does not provide the
agent-facing policy endpoints, target resolution, heartbeat-run
attribution, typed denials, conservative workflow guidance, or UI needed
for safe agent-managed cleanup.

### Proposed solution

Allow authorized agents to archive or unarchive responsible-user inbox
items under the user's open, allowlist, or disabled policy; preserve
actor/agent/run attribution in issue detail and activity records; expose
policy controls and agent archive attribution in the UI; and document
conservative cleanup rules for agents and PR gardening.

### Alternatives considered

- Reuse generic issue mutation permissions: rejected because inbox state
belongs to a target user and requires user-scoped authorization.
- Automatically archive every completed or closed item: rejected because
completion signals can still require human review or a decision.
- Keep the backend and UI as separate stacked PRs: superseded by this
consolidated PR so the complete user-visible behavior can be reviewed
and verified together.

### Related work

- Builds on merged foundations #9654 and #9658.
- Supersedes the remaining stacked changes in #9659 and #9661.
- `ROADMAP.md` has no overlapping inbox archive or inbox authorization
initiative.

## What Changed

- Added shared inbox-agent policy types and validators plus
company-scoped self-service policy routes and OpenAPI coverage.
- Enabled agent archive/unarchive mutations with responsible-user
targeting, policy enforcement, typed failures, attribution, idempotency,
and detailed activity auditing.
- Returned agent archive attribution in issue detail and documented
reversible inbox cleanup semantics in the implementation spec and
Paperclip skill.
- Added conservative PR-gardening inbox tidy guidance that keeps GitHub
access read-only and avoids archiving work that still needs human
action.
- Added the Profile settings policy control and Issue Properties
attribution/unarchive UI with focused component coverage and narrow-pane
handling.

## Verification

- `pnpm exec vitest run
server/src/__tests__/inbox-archive-routes.test.ts
server/src/__tests__/inbox-agent-policy-routes.test.ts
server/src/__tests__/authorization-service.test.ts
server/src/__tests__/openapi-routes.test.ts
ui/src/components/InboxAgentPolicyControl.test.tsx
ui/src/components/IssueProperties.test.tsx` — 110 passed.
- `pnpm --filter @paperclipai/db exec vitest run
src/inbox-archive-agent-policies-migration.test.ts` — 1 passed.
- `node --test
.agents/skills/pr-gardening/scripts/pr-gardening.test.mjs` — 9 passed.
- `pnpm --filter @paperclipai/server typecheck` — passed.
- `pnpm --filter @paperclipai/ui typecheck` — passed.
- `pnpm check:token-gates` — changed files are clean; the
repository-wide command currently reports nine unrelated pre-existing
`#9627` literals outside this PR's diff.

## Risks

- Agent inbox mutations broaden an existing endpoint path, so
authorization and target resolution must remain fail-closed; focused
route and authorization tests cover allowed and denied paths.
- Archive state affects only the responsible user's inbox presentation
and remains reversible; it does not mutate issue status, assignment, or
visibility.
- The UI policy defaults to the existing open behavior, while allowlist
and disabled modes can reduce agent access.
- This PR intentionally builds on #9654 and #9658 and contains no new
migration number or modification to an already-applied migration.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex using GPT-5.4, medium reasoning, repository tool use,
shell execution, code review, and test execution.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change
(`feat/inbox-agent-archive-complete`) and contains no internal Paperclip
ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>
2026-07-16 16:49:18 -05:00
DottaandPaperclip 52aea90263 feat: organize skills with nested folders and My Skills (#9633)
## Thinking Path

> - Paperclip is the open source control plane people use to organize
and govern AI-agent companies
> - Company skills are durable resources that users browse, import,
assign, and maintain over time
> - A flat skill list plus tags does not provide a stable location or
hierarchy for personal, company, project-imported, and bundled skills
> - Folder paths need to be canonical, company-scoped, safe to move, and
preserved across re-imports without changing skill IDs
> - The `/skills` UI also needs traversal, breadcrumbs, move/create
flows, and a dedicated My Skills namespace that work on desktop and
mobile
> - This pull request adds the folder data model and APIs, reserved-root
lifecycle, project import behavior, and the folder-first skills
experience
> - The benefit is a predictable filesystem-like organization model
while tags remain available for cross-cutting classification

## Linked Issues or Issue Description

Refs #9619 — the reviewed folder foundation was intentionally closed and
folded into this combined feature PR.
Refs #9026 — earlier flat-folder attempt superseded by this integrated
implementation.
Refs #3281 — related skill organization proposal; this PR uses canonical
persisted folders rather than deriving groups from skill keys, and does
not add hidden-skill behavior.

**Feature request**

- **Problem:** Skills currently lack a canonical hierarchical location,
making personal skills, project imports, bundled skills, and
company-authored skills difficult to traverse and manage at scale.
- **Proposed behavior:** Add nested company-scoped folders with stable
paths, reserved My/Projects/Bundled roots, subtree queries, safe
move/create operations, and a folder-first `/skills` library UI.
- **Import behavior:** New project scans file skills under
`projects/<project-slug>`; later imports update content without
overriding a user-selected folder.
- **Alternatives considered:** Tags alone remain useful for
cross-cutting classification, but they do not provide canonical
location, nesting, reserved namespaces, or stable import placement.
- **Roadmap alignment:** Extends the completed Skills Manager and
Scheduled Routines capabilities without duplicating an active roadmap
item.

## What Changed

- Adds `folders` persistence for routine and skill folders, nested
canonical paths, parent/slug/system-key fields, migration backfills, and
reapply-safe migrations `0174`–`0175` after current master migrations.
- Adds company-scoped folder CRUD, cycle/depth/namespace validation,
reserved My/Projects/Bundled lifecycle, item moves, subtree filtering,
and folder paths on skill results.
- Preserves project-import placement: first import files into the
project folder, while re-import keeps user-owned placement and stable
skill IDs.
- Adds the `/skills` folder tree rail, tags facet, breadcrumbs,
subfolder browser, move/new-folder dialog, canonical detail location,
inline tag editing, and folder-aware Studio creation.
- Keeps bundled skills read-only even when their source metadata is
incomplete by detecting the reserved Bundled folder and hiding
selection/move actions.
- Extends routine folder UI and OpenAPI coverage, and adds regression
tests across migrations, services, routes, tree helpers, pages, and
Studio creation.

## Verification

- `pnpm exec vitest run
packages/db/src/nested-skill-folders-migration.test.ts
server/src/__tests__/folders-routes.test.ts
server/src/__tests__/folders-service.test.ts
server/src/__tests__/company-skills-service.test.ts
server/src/__tests__/routines-service.test.ts
ui/src/components/folders/FolderControls.test.tsx
ui/src/components/folders/SkillFolderTree.test.tsx
ui/src/components/folders/skill-folder-tree.test.ts
ui/src/pages/CompanySkills.test.tsx ui/src/pages/Routines.test.tsx
ui/src/pages/SkillStudio.test.tsx
ui/src/lib/company-skill-routes.test.ts ui/src/lib/skill-create.test.ts`
— 13 files, 192 tests passed.
- `pnpm exec vitest run ui/src/pages/CompanySkills.test.tsx
ui/src/components/folders/SkillFolderTree.test.tsx` — 2 files, 20 tests
passed after preserving the existing PR's bundled-skill fixes.
- `pnpm -r typecheck` — passed for all workspace packages.
- `pnpm test:run` — passed in an isolated CI-like environment with
inherited Paperclip runtime identity and static AWS credential variables
removed.
- `pnpm build` — production build passed for all workspace packages.
- Greptile iteration 2 — 5/5 confidence with zero unresolved threads on
commit `ff2d67aa71`.
- Latest-head GitHub checks — all success, neutral, or skipped; PR is
mergeable with a clean merge state.
- `pnpm check:token-gates` — reports nine existing `#9627` comment false
positives already present on `master`; this PR introduces no new token
violation.

## Risks

- **Migration/backfill:** `0174` creates the foundation and `0175` adds
nested/reserved semantics. Both are ordered after current master
migration `0173`, are covered by numbering/safety checks, and are
designed to be reapply-safe.
- **Reserved namespaces:** My, Projects, and Bundled roots are
service-managed. Regression coverage prevents namespace squatting,
cross-company folder use, bundled writes, cycles, and excessive depth.
- **Behavioral change:** Project scans choose a project folder only on
initial creation; existing skills deliberately retain their current
folder during refresh.
- **UI scope:** The folder rail applies to the Installed library;
Catalog retains the discovery-oriented category sidebar.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI `gpt-5.5` in Codex CLI, medium reasoning mode; runtime did not
expose a context-window value. Used repository/file tools, terminal
execution, Git/GitHub operations, test execution, and code editing.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-16 15:50:45 -05:00
Dotta 8b04147ca4 perf(ui): stop polling the event-sourced company live-runs list (#9701)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Its web UI keeps live views fresh with a live-events websocket plus
React Query, and #9627 began replacing polling with event-sourcing
(pushing data into the cache)
> - After the churn fixes (#9624) and #9627 shipped, a long-lived tab's
memory footprint was still climbing, so I re-profiled with the Chrome
DevTools MCP
> - The dominant remaining churn is React Query re-arming a polled
query's `refetchInterval` timer on **every** observer notification — and
our live-event handlers `setQueryData(liveRuns(companyId))` on nearly
every event, so each pushed update re-arms every `liveRuns` observer's
timer (the sidebar is always mounted)
> - #9627 event-sourced the live-runs data but left the now-redundant
`refetchInterval` in place, so we did half the fix — the poll is pure
waste and the thing re-arming timers
> - This pull request removes `refetchInterval` from the event-sourced
company live-runs queries so the frequent cache writes have no timer to
re-arm
> - The benefit is that the steady-state timer churn on the
most-observed resource collapses, so the off-heap footprint stops
climbing

## Linked Issues or Issue Description

No public GitHub issue exists; describing inline per CONTRIBUTING.md →
"Link Issues or Describe Them In-PR", following the bug report template.
Continues #9569 / #9624 / #9627.

**What happened?**

With the earlier fixes deployed, a browser tab left open on the app kept
growing its memory footprint. MCP profiling showed ~100+ `setInterval`
create/clear cycles per 5s on an aged tab (vs ~16 fresh), all from React
Query's refetch-interval timers being re-armed on every `setQueryData`
to the frequently-written `liveRuns(companyId)` query.

**Expected behavior**

A resource whose data is pushed (event-sourced) should not also poll;
cache writes should not repeatedly re-arm interval timers. Idle tabs
should hold a bounded footprint.

**Steps to reproduce**

Open a tab with agents streaming, leave it open, and instrument
`setInterval`/`clearInterval`: the churn rate climbs and traces to
`QueryObserver.updateTimers` (`refetchInterval`) for `liveRuns`,
re-armed by every live-event cache write.

**Paperclip version or commit**

Branch `perf/drop-live-runs-refetch-interval`, off `master` (after
#9627).

**Deployment mode**

Local dev (`pnpm dev`), web UI. Core UI live-updates plumbing; not
adapter-specific.

## What Changed

- Set `refetchInterval: false` on every site that polls the **plain**
`queryKeys.liveRuns(companyId)` query (event-sourced by #9627):
`Sidebar`, `SidebarAgents`, `Issues`, `Inbox`, `IssueDetail`
(companyLiveRuns), `ProjectDetail` (×2), `Routines`,
`ExecutionWorkspaceDetail`, `bridge-init`.
- Removed the now-unused `useVisibilityRefetchInterval` interval
vars/imports in `Issues`, `Inbox`, `IssueDetail`.
- **Left variant-key sites polling on purpose** — `Agents` page
(`[...liveRuns, "agents-page"]`) and `ActiveAgentsPanel` (`[...liveRuns,
scope, …]`) are NOT event-sourced by #9627 (different exact cache key),
so dropping their poll would make them stale. Those are a later phase.
- Freshness for the converted queries now comes from event-sourcing
(#9627) + its reconnect reconcile; the initial mount fetch and cross-tab
publish (`usePublishSharedQueryData`) still happen.

## Verification

- MCP profiling identified the churn: the single churning callback is
React Query's `refetchInterval` timer, re-armed by
`setQueryData(liveRuns)` on live events.
- `vitest`: all affected suites pass (`Sidebar`, `SidebarAgents`,
`Issues`, `Inbox`, `IssueDetail`, `ProjectDetail`, `Routines`,
`ExecutionWorkspaceDetail`, `LiveUpdatesProvider`) — 153 tests.
- Updated two `SidebarAgents` linger-window tests: they advanced fake
timers to the *exact* linger-expiry boundary and had relied on
poll-induced re-renders to flush. The linger self-schedules its own
`setTimeout`, so the tests now cross the boundary with a small margin +
an explicit flush (no product change).
- `tsc -b` clean.
- End-to-end footprint reduction should be re-measured against a rebuilt
bundle with the same instrumentation.

## Risks

Low, client-only.
- `liveRuns(companyId)` freshness now depends entirely on event-sourcing
+ reconnect reconcile (both from #9627). If an event path is missed, the
reconnect handler refetches once; durable replay is a planned later
phase.
- Variant-key run lists (Agents page, ActiveAgentsPanel) are unchanged
and still poll, so they don't regress.
- Issue-scoped run queries (`issues.liveRuns/activeRun/runs`) are
**not** touched here — they aren't event-sourced yet and are a separate
phase.

## Model Used

- **Provider:** Anthropic, via the Claude Code CLI.
- **Model:** Claude Opus 4.8 (`claude-opus-4-8`).
- **Reasoning mode:** Extended thinking enabled.
- **Capabilities used:** tool use (shell, file editing), and the Chrome
DevTools MCP to re-profile the live instance and pinpoint the
`refetchInterval` timer churn.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work (a perf/plumbing change)
- [x] I have searched GitHub for duplicate or related PRs and linked
them above (continues #9627; no duplicates)
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have considered and documented any risks above
- [ ] I have updated relevant documentation to reflect my changes (N/A —
no user-facing docs; rationale documented inline)
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)
2026-07-16 11:42:04 -05:00
DottaandClaude Opus 4.8 054b076b58 fix(ui): keep inbox hover and j/k keyboard selection in sync across list reshapes (#9680)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - The Inbox is the primary triage surface; it supports both mouse
hover and `j`/`k` keyboard navigation over a flat, expandable list of
rows
> - Hover and keyboard selection are meant to be a single shared
"cursor": hovering a row and then pressing `j`/`k` should continue from
the hovered row, not jump elsewhere
> - A prior hover-perf rewrite moved the hovered row into a numeric
`hoveredIndexRef` and nulled it whenever the list reshaped; because the
inbox polls constantly, any refresh between hovering and pressing a key
dropped the hovered index
> - With the hovered index dropped, the next keypress fell back to
selection index `0`, stranding the cursor at the top of the list instead
of continuing from the hovered row
> - This pull request tracks the hovered row's stable identity (a nav
key) alongside the numeric index and re-anchors it by key across
reshapes, mirroring the existing keyboard-selection reconciliation
> - The benefit is that mouse hover and keyboard navigation stay in sync
exactly as intended, even while the inbox is polling

## Linked Issues or Issue Description

**Bug report**

- **What happened:** In the Inbox, hovering a row with the mouse and
then pressing `j`/`k` (or another keyboard shortcut) does not continue
from the hovered row. If the list refreshes (which happens on the
inbox's constant polling) in the moment between hovering and pressing a
key, keyboard selection snaps back to the top row instead.
- **Expected behavior:** The keyboard cursor should be in sync with the
hovered row — pressing `j`/`k` after hovering should move relative to
the row the mouse is over.
- **Steps to reproduce:**
  1. Open the Inbox with several rows.
  2. Hover the mouse over a row partway down the list.
  3. Wait for (or trigger) a background poll/refresh of the list.
  4. Press `j` or `k`.
5. Observe selection jumps to the top of the list instead of continuing
from the hovered row.
- **Root cause:** The `[flatNavItems]` effect nulled `hoveredIndexRef`
on every list reshape. Since hover also clears the keyboard selection
band to `-1`, the fallback selection index resolved to `0`.

## What Changed

- Hoisted `navEntryKey` to module scope so it can compute a stable,
index-independent identity for a nav row from both the hover handler and
the reshape effect.
- Added `hoveredNavKeyRef` to track the hovered row's stable key
alongside the existing numeric `hoveredIndexRef`, set whenever the
pointer selects a row.
- On list reshape, re-anchor the hovered index by key (find the row with
the same key) instead of unconditionally dropping it; only drop the
hover when the row is actually gone. This mirrors the existing
`selectedIndex` key-based reconciliation.
- Added a unit test that hovers a row, reshapes the list via a simulated
poll, presses `j`, and asserts selection continues from the hovered row.

## Verification

- `pnpm --filter ./ui exec vitest run src/pages/Inbox.test.tsx` → 15/15
passing, including the new hover→`j`/`k` sync test and the existing
keyboard-nav tests.
- The new test explicitly covers the reshape-during-hover path that the
prior test suite had deferred to live/e2e verification.

## Risks

- Low risk. The change is confined to the Inbox's in-memory
hover/selection bookkeeping (two refs and one effect); it adds no new
renders (hover still paints via CSS `:hover`) and touches no data
fetching, routing, or persistence. Behavior is unchanged when the list
does not reshape; when it does, the hover now follows the same row
instead of being dropped.

## Model Used

- Claude Opus 4.8 (Anthropic), model id `claude-opus-4-8`, used with
extended thinking and tool use (file edits, running the UI test suite
locally).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [ ] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>
2026-07-16 07:50:48 -05:00
f44a002b8d fix(ui): restore prefix-aware company export/import links (#6648)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Each company workspace in the web UI is mounted under a URL prefix
(e.g. `/NEU/company/...`), and `Link` from `@/lib/router` applies that
prefix automatically via `applyCompanyPrefix`
> - Company Settings rendered its Org Chart, Export, Import, and Cloud
Upstream buttons as raw `<a href>` anchors, which drop the prefix, so
those pages 404 on prefixed instances (#2910);
`CompanyExport.filePathFromLocation` also failed to locate
`/company/export/files/` inside prefixed URLs, breaking export file
previews
> - #2951 fixed the Settings links with `<Link to>` plus tests, but the
sandbox-settings work in #4415 reverted the links back to `<a href>`,
silently reintroducing the bug (#6647)
> - This pull request restores the prefix-aware `<Link>` for all four
Settings links, normalizes the pathname with `toCompanyRelativePath()`
before matching the export-files marker, and adds regression tests
covering every route so the fix cannot be lost again
> - The benefit is that export/import/org-chart/cloud-upstream
navigation and export file previews work on every prefixed deployment

## Linked Issues or Issue Description

Fixes: #6647
Refs #2910 (original report: `/company/export` → prefix `COMPANY` → not
found)
Refs #2951 (original fix with `<Link to>` + tests — merged, then lost)
Refs #4415 (sandbox settings PR that reverted Settings back to `<a
href>`)

## What Changed

- **`ui/src/pages/CompanySettings.tsx`**: use `Link` from `@/lib/router`
for the Org Chart, Export, Import, and Cloud Upstream buttons (replacing
raw `<a href>`)
- **`ui/src/pages/CompanyExport.tsx`**: resolve file paths from prefixed
URLs by normalizing with `toCompanyRelativePath()` before matching
`/company/export/files/`
- **`ui/src/lib/company-routes.test.ts`**: regression tests for
export/import/cloud-upstream/org prefix rewriting, double-prefix
prevention, and export file URL normalization

## Verification

```bash
pnpm vitest run ui/src/lib/company-routes.test.ts
```

Manual:

1. Open `http://localhost:3100/NEU/company/settings` (or your company
prefix).
2. Click **Export** / **Import** — URL should stay under
`/:prefix/company/...`.
3. On export, select a file — URL should be
`/:prefix/company/export/files/...` and preview should load.

The change is navigation-target-only (no visual/layout changes), so
before/after is shown as the resolved URLs:

| Link | Before (prefix dropped → not found) | After |
|------|-------------------------------------|-------|
| Export | `/company/export` | `/NEU/company/export` |
| Import | `/company/import` | `/NEU/company/import` |
| Org Chart | `/org` | `/NEU/org` |
| Cloud Upstream | `/company/settings/cloud-upstream` |
`/NEU/company/settings/cloud-upstream` |

## Risks

Low — same approach as #2951; only navigation/parsing, no API changes.

## Model Used

- Original implementation: authored by @qbamca in Cursor (agentic
editor; the session's exact model ID was not recorded)
- Follow-up commit (merge-conflict resolution) and this description
update: Claude Fable 5 (Anthropic, `claude-fable-5`, extended thinking,
agentic tool use), operated by the Commit Capital triage team

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes (no
doc changes required — behavior matches documented routing)
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
(pending re-review of the conflict-resolution commit)
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Jakub Mikiciuk <jmikiciuk@igus.net>
Co-authored-by: Cursor <cursoragent@cursor.com>
Co-authored-by: Andrew Aymeloglu <aaymeloglu@gmail.com>
Co-authored-by: Claude Fable 5 <noreply@anthropic.com>
2026-07-15 22:52:40 -05:00
DottaandPaperclip 8eff54bc47 [codex] Explain AWS secret creation failures in the UI (#9645)
## Thinking Path

> - Paperclip is the open source control plane operators use to manage
AI-agent companies.
> - Operators can store runtime secrets in provider vaults such as AWS
Secrets Manager.
> - The server already preserves sanitized AWS failure details,
including the failed operation, required IAM capability, region, and
safe recovery options.
> - The create-secret dialog reduced that structured response to a
generic message, leaving operators unable to understand or fix failed
AWS writes.
> - This pull request keeps the safe structured error through the UI and
presents concise, actionable diagnostics without exposing raw AWS
principals or account details.
> - The benefit is that operators can correct IAM access or link an
existing AWS secret immediately instead of debugging an opaque failure.

## Linked Issues or Issue Description

No public issue was found for this exact UI gap.

Bug report:
- What happened: creating a Paperclip-managed value in AWS Secrets
Manager could fail with a generic dialog error even though the API
returned safe, actionable provider details.
- Expected behavior: the dialog should identify the AWS operation,
required IAM capability, region, provider vault, and safe alternative
while keeping raw cloud-provider details redacted.
- Steps to reproduce: configure an AWS Secrets Manager provider vault
without `secretsmanager:CreateSecret`, then create a Paperclip-managed
secret using that vault.
- Paperclip version/commit: current `master` before this PR.
- Deployment mode: Paperclip server with an AWS Secrets Manager provider
vault.

Related prior server-side propagation work:
- Refs #9161

## What Changed

- Preserve the structured `ApiError` returned by failed create-secret
mutations instead of reducing it to a string.
- Render AWS-specific, sanitized diagnostics with the required IAM
capability, region, provider vault, operation, and external-reference
recovery option.
- Add a full dialog render regression test that verifies actionable
details appear and raw AWS ARN/account information does not.

## Verification

- `pnpm exec vitest run ui/src/pages/Secrets.render.test.tsx` — 1 file
passed, 15 tests passed.
- `pnpm --filter @paperclipai/ui typecheck` — passed.
- `pnpm check:token-gates` — all gates clean.
- `git diff --check public-gh/master...HEAD` — passed.

### Visual Verification

QA verified both states in Chromium at head `357cd2271` using the real
`Secrets` component and confirmed that raw AWS account, ARN,
assumed-role, and provider exception details are absent from the
rendered DOM.

**AWS access-denied diagnostics**

![AWS access-denied
diagnostics](https://pages.paperclip.ing/pap-14130-secret-error/aws-access-denied.png)

**Generic non-AWS fallback**

![Generic non-AWS
fallback](https://pages.paperclip.ing/pap-14130-secret-error/generic-error.png)

## Risks

Low risk. The change only affects failed create-secret presentation in
the UI; successful secret creation, API contracts, schema, and
migrations are unchanged. The structured details are server-sanitized,
and the regression test confirms raw AWS principal/account data is not
rendered.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

OpenAI `gpt-5.4` via Codex CLI, with tool-enabled repository editing,
shell execution, Git, GitHub, and Paperclip API access. Reasoning mode
and exact context-window size were not exposed by the runtime.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-15 21:47:07 -05:00
DottaandPaperclip 8368fb30b0 fix(routines): coalesce sub-hourly catch-up runs (#9649)
## Thinking Path

> - Paperclip is the open source control plane people use to run
AI-agent companies.
> - Scheduled routines support catch-up policies when the server resumes
after missed cron ticks.
> - The existing capped replay policy dispatched once per missed tick,
which can flood the board after downtime for frequent schedules.
> - Sub-hourly routines usually need one prompt catch-up execution
rather than historical per-tick replay, while hourly-or-slower schedules
may rely on the existing behavior.
> - This pull request coalesces missed sub-hourly ticks into one
execution and keeps the slower-schedule behavior unchanged.
> - The benefit is bounded recovery work without changing the semantics
of lower-frequency scheduled routines.

## Linked Issues or Issue Description

### What happened?

When a scheduled routine using `enqueue_missed_with_cap` resumes after
several missed sub-hourly cron ticks, Paperclip dispatches one catch-up
execution for every missed tick. Those executions arrive in a
same-second burst and can flood the board with duplicate-looking work.

### Expected behavior

Sub-hourly schedules should advance past all missed ticks but dispatch
exactly one catch-up execution. Hourly-or-slower schedules should retain
capped per-tick replay.

### Steps to reproduce

1. Build Paperclip from `master` and create a routine with a sub-hourly
cron schedule and `catchUpPolicy: enqueue_missed_with_cap`.
2. Set its persisted `nextRunAt` far enough in the past to cover several
scheduled occurrences.
3. Run routine catch-up processing.
4. Observe multiple catch-up dispatches instead of one coalesced
execution.

### Paperclip version or commit

Reproduced on `master` before this PR.

### Deployment mode

Built from source in local development with embedded PGlite.

## What Changed

- Classify sub-hourly cadence from timezone-aware scheduled occurrences,
avoiding daily multi-minute false positives while supporting schedules
restricted to active days.
- Coalesce all missed sub-hourly ticks into one catch-up dispatch while
advancing `nextRunAt` to the next future occurrence.
- Preserve capped per-tick replay for hourly-or-slower schedules.
- Clarify the catch-up policy labels in both routine editing surfaces.
- Add regression coverage for both the coalesced and preserved
behaviors.

## Verification

- `pnpm exec vitest run server/src/__tests__/routines-service.test.ts
--testNamePattern='coalesces multiple missed sub-hourly ticks|continues
replaying each missed hourly tick|continues replaying missed ticks for
daily schedules with multiple minute values|coalesces sub-hourly
schedules restricted to weekdays'` — 4 passed.
- `pnpm check:token-gates` — all gates clean.
- `git diff --check origin/master...HEAD` — clean.

## Risks

- Low-to-moderate behavioral risk: sub-hourly routines using
`enqueue_missed_with_cap` now intentionally receive one recovery
execution instead of one per missed tick.
- Hourly-or-slower schedules retain their previous capped replay
behavior, limiting the compatibility surface.
- No schema, migration, workflow, or lockfile changes.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex CLI with GPT-5.5, medium reasoning, code execution and
repository tool use; the runtime did not expose a context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-15 21:46:10 -05:00
3ae2c30f2f feat(skills): import skills from projects (#9620)
## Thinking Path

> - Paperclip is the open source control plane people use to manage
AI-agent companies.
> - Company skills make reusable agent behavior discoverable and
editable from one place.
> - Projects already contain skill directories, but operators had to
import each skill path manually.
> - Copying those skills would break the desired write-through workflow
between Skill Studio and the source project.
> - The server therefore needs a safe preview/select/import contract
that only accepts rediscovered, workspace-contained candidates.
> - The UI needs a guided project picker that explains reference
semantics, handles conflicts, and remains usable on mobile.
> - This pull request adds that end-to-end project skill import flow
with authorization, tenant-scope, traversal, and symlink regression
coverage.
> - The benefit is faster bulk onboarding while keeping project files as
the single source of truth.

## Linked Issues or Issue Description

**Feature request**

**Problem:** Importing several skills already stored in a Paperclip
project requires operators to discover and submit each local path
individually. This is slow, hides which well-known directories were
searched, and makes conflict/already-imported states difficult to
evaluate before mutation.

**Proposed solution:** Add an “Import skills from project” flow that
previews skills from well-known directories, lets operators selectively
import eligible candidates, and stores local-path references so Skill
Studio edits write through to the project files.

**Alternatives considered:** Copying files into company-managed skill
storage was rejected because it creates divergent copies. Trusting
client-supplied paths was rejected because imports must be constrained
to server-rediscovered, workspace-contained candidates.

**Additional context:** GitHub duplicate search found no existing issue
or PR for this exact workflow. Refs #3799 for related skill-import
inventory behavior; this PR does not claim to close that issue.

## What Changed

- Extend `scan-projects` with backward-compatible preview and
selective-import modes, typed validation, candidate statuses, and
OpenAPI coverage.
- Discover project skills under `skills`, `.agents/skills`,
`.claude/skills`, `.codex/skills`, `.cursor/skills`, `.opencode/skills`,
and `.gemini/skills`.
- Re-discover selections server-side, enforce company/project/workspace
scope, and reject traversal or symlink escapes before creating
`local_path` references.
- Add the Skills-page menu entry and responsive project import dialog
with project selection, grouped candidates, select all/deselect all,
conflicts, empty/error/403 states, and import results.
- Add route, service, and component regressions for preview
authorization, cross-tenant selections, traversal/symlink safety,
selection counts, grouping, and result semantics.

### Screenshots

**Choose a project**

![Choose a
project](https://raw.githubusercontent.com/cryppadotta/paperclip-prs/refs/heads/pr-assets/import-skills-from-project/01-pick-project.png)

**Review discovered skills**

![Review discovered
skills](https://raw.githubusercontent.com/cryppadotta/paperclip-prs/refs/heads/pr-assets/import-skills-from-project/03-select.png)

**Mobile selection footer**

![Mobile selection
footer](https://raw.githubusercontent.com/cryppadotta/paperclip-prs/refs/heads/pr-assets/import-skills-from-project/select-390.png)

**Import result**

![Import
result](https://raw.githubusercontent.com/cryppadotta/paperclip-prs/refs/heads/pr-assets/import-skills-from-project/06-result.png)

## Verification

- `pnpm exec vitest run
server/src/__tests__/company-skills-service.test.ts
server/src/__tests__/company-skills-routes.test.ts
ui/src/pages/skills/ImportSkillsFromProjectDialog.test.tsx` — 3 files,
81 tests passed.
- `pnpm check:token-gates` — all token gates clean.
- `pnpm --filter @paperclipai/shared typecheck` — passed.
- `pnpm --filter @paperclipai/server typecheck` — passed.
- `pnpm --filter @paperclipai/ui typecheck` — passed.
- Security review passed after adding tenant-scope and
unauthorized-preview regressions; UX re-review approved desktop/mobile
surfaces; QA passed all seven acceptance areas including write-through
editing, deduplication, conflicts, empty state, and permission denial.

## Risks

- Files remain referenced in project workspaces, so moving or deleting a
source directory can make an imported skill unavailable; the UI
explicitly communicates the reference behavior.
- New well-known directory scans may discover more candidates than older
versions, but preview mode prevents mutation until the operator confirms
a selection.
- The endpoint remains backward compatible: omitting `mode` preserves
the prior full-import behavior.
- No schema migration or telemetry event changes.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- Anthropic Claude Opus 4.8 with tool use/code execution assisted with
the UI implementation and UX polish. OpenAI Codex CLI with tool use/code
execution assisted with server implementation, security fixes,
regression coverage, integration, and PR preparation; the runtime did
not expose Codex's exact backing model ID or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>
2026-07-15 18:01:44 -05:00
89ce36d7af feat(skills): open-by-default company skill policy and core UX (#9564)
## Thinking Path

> - Paperclip uses company skills to make agent capabilities reusable
across an organization.
> - Skill operations currently mix capability availability with
permission checks, which creates avoidable setup friction and
inconsistent denial handling.
> - The policy contract needs to remain open by default while allowing
company-scoped restrictions for governed deployments.
> - Core owns the canonical policy actions, persistence, evaluation, API
behavior, safe import boundaries, and generic denial/read-only UI.
> - Enterprise policy-editor implementation belongs in the separate
`paperclip-ee` repository and is intentionally excluded from this PR.

### Problem or motivation

Company skill operations can encounter permission dead ends even when no
explicit restriction has been configured, and import-source
classification can drift between policy evaluation and execution.

### Proposed solution

Define eight canonical skill policy actions, default all actions to
allowed, persist company-scoped restrictions, expose policy evaluation
APIs, normalize import sources at the boundary, and update Skill Studio
to present actionable restriction states without embedding Enterprise
Edition implementation in the core repository.

### Alternatives considered

Keeping capability checks distributed across routes and UI surfaces was
rejected because it duplicates policy logic and makes denial behavior
inconsistent. Shipping the Enterprise policy editor in this repository
was rejected because `paperclip-ee` is a separate repository and must
receive its own PR.

### Roadmap alignment

Extends the completed **Skills Manager** roadmap area by adding coherent
governance and removing workflow dead ends.

### Additional context

The core API contract remains suitable for a separate Enterprise Edition
editor, but this PR contains no `paperclip-ee` package or EE-specific UI
integration code.

## What Changed

- Added the company skill policy contract to product and implementation
documentation, including the open-by-default rule, eight canonical
actions, decision shape, and core/EE ownership boundary.
- Added the company-scoped policy schema, migration `0170`, shared
validators, policy service, REST routes, OpenAPI coverage, and focused
server tests.
- Hardened import policy enforcement by normalizing import sources and
keeping source classification consistent between policy evaluation and
execution.
- Updated core Skill Studio behavior to remove generic permission dead
ends and show actionable policy/platform denial states only when an
operation is actually denied.
- Removed the `plugin-paperclip-ee` package, Docker wiring, EE
discovery/deep-link helpers, and EE-specific UI tests/stories from this
PR so that implementation can be submitted separately to the EE
repository.
- Preserved open-by-default behavior when no explicit company
restriction exists.

## Verification

- `pnpm --filter @paperclipai/ui exec vitest run
src/components/skill-studio/SkillPolicySurfaces.test.tsx
src/lib/skill-policy-denial.test.ts` — 20/20 passed.
- `pnpm --filter @paperclipai/ui exec tsc --noEmit` — passed.
- `pnpm --filter @paperclipai/server exec vitest run
src/__tests__/worktree-config.test.ts` — 12/12 passed.
- `pnpm check:token-gates` — passed with all gates clean.
- `git diff --check` — passed.
- `git diff --name-only origin/master | rg
'paperclip-ee|ee-skill-policy'` — no matches.

## Risks

- Migration `0170` introduces company policy persistence; rollout
depends on the migration applying before policy routes are exercised.
- Open-by-default is an intentional behavioral policy: deployments
expecting implicit denials must configure explicit restrictions.
- Import normalization is security-sensitive and should retain focused
review.
- The separate EE editor must stay contract-compatible with the core
policy API as policy actions evolve.

## Model Used

- OpenAI Codex CLI, runtime model identifier and context-window size not
exposed by this execution environment; reasoning, repository tool use,
shell execution, and code review capabilities enabled.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details available to this runtime)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked or
described the result above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change and contains no internal
Paperclip ticket id or instance-derived details
- [x] I have run focused tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green on the latest head
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Claude Fable 5 <noreply@anthropic.com>
Co-authored-by: Evyatar Bluzer <bluzername@users.noreply.github.com>
2026-07-15 11:42:40 -05:00
DottaandPaperclip f712cedbc2 feat(mcp) [split 7/8]: activate Apps and gateway UI (#9562)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Governed MCP access spans contracts, runtime enforcement, adapters,
UI surfaces, and operator verification
> - The parity reference PR #9534 is too large for effective automated
or human review
> - The feature therefore needs a linear stack whose individual diffs
stay below the 100-file review limit
> - This pull request is split 7/8 and focuses on Apps/Gateways UI and
feature-flagged activation
> - The benefit is a standalone, testable review boundary while
preserving byte-for-byte parity at the top of the stack

## Linked Issues or Issue Description

- Related parity reference: #9534
- Problem: The standalone UI foundation needs feature-flagged routes,
navigation, app detail flows, gateways, Storybook scenarios, and QA
configuration.
- Proposed solution: Adds Apps/Gateways pages and components,
navigation/route activation, remaining page integrations, Storybook
stories, and QA Vite configuration.
- Alternatives considered: keeping #9534 as one 403-file review, or
rewriting the feature to manufacture seams; both were rejected in favor
of path extraction plus compile-driven boundary moves.
- Roadmap alignment: this advances the existing governed MCP/tool-access
work already represented by #9534; it does not introduce a separate
roadmap initiative.
- Stack position: base branch is
`pap10341-split/06-ui-tools-foundation`.
- Merge policy: merge bottom-up, in order, only after the complete
eight-PR stack has been reviewed and the top-of-stack parity gate
remains empty.
- Requested review: UXDesigner sanity pass on Apps/Gateways flows and
flag-off behavior; Greptile on every PR.

## What Changed

- Adds Apps/Gateways pages and components, navigation/route activation,
remaining page integrations, Storybook stories, and QA Vite
configuration.
- Keeps this PR below 100 changed files and independently typecheckable.
- Preserves the final tree from #9534 when combined with the other seven
stack levels.

## Verification

- `pnpm typecheck`
- `pnpm check:token-gates` — all gates clean
- Focused UI Vitest run with `NODE_ENV=test` — 17 files, 147 tests
passed

## Risks

- Navigation or flag regressions could expose incomplete experiences;
activation remains controlled by existing experimental settings.
- Stack risk: merging out of order can expose incomplete layers;
mitigate by following the documented bottom-up merge policy.
- Parity risk: later edits to an intermediate branch can drift from
#9534; mitigate by re-running the empty top-of-stack diff before merge.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex, exact model ID `gpt-5.4`; runtime-managed context
window; medium reasoning with repository, shell, Git, GitHub CLI, and
code-execution tools enabled.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] Internal references are omitted except the execution-plan link
explicitly required for this coordinated split stack
- [x] My branch name describes the change and contains no internal
Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge


## Stack Coordination

- Internal execution plan:
[PAP-13874](/PAP/issues/PAP-13874#document-plan)
- Parity reference: #9534
- Stack: #9556 → #9557 → #9558 → #9559 → #9560 → #9561 → #9562 → #9563
- Merge bottom-up only after full-stack review and an empty parity diff
at #9563.


## UI Evidence

QA captured these from the live Garden MCP split stack at 1440px and
verified clean rendering:

![Apps
connections](https://raw.githubusercontent.com/paperclipai/paperclip/42512d030c96f678c379fbd97d8b7c1737d654fc/doc/screenshots/garden-mcp-split-stack/apps-list.png)

![Gateway
detail](https://raw.githubusercontent.com/paperclipai/paperclip/42512d030c96f678c379fbd97d8b7c1737d654fc/doc/screenshots/garden-mcp-split-stack/gateway-detail.png)

![BYO connect
wizard](https://raw.githubusercontent.com/paperclipai/paperclip/42512d030c96f678c379fbd97d8b7c1737d654fc/doc/screenshots/garden-mcp-split-stack/byo-connect.png)

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-14 15:40:08 -05:00
DottaandPaperclip a116713b9a feat(mcp) [split 6/8]: add Tools and Profiles UI foundation (#9561)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Governed MCP access spans contracts, runtime enforcement, adapters,
UI surfaces, and operator verification
> - The parity reference PR #9534 is too large for effective automated
or human review
> - The feature therefore needs a linear stack whose individual diffs
stay below the 100-file review limit
> - This pull request is split 6/8 and focuses on UI API, shared
components, and Tools/Profile surfaces
> - The benefit is a standalone, testable review boundary while
preserving byte-for-byte parity at the top of the stack

## Linked Issues or Issue Description

- Related parity reference: #9534
- Problem: Operators need typed clients and administration surfaces that
compile independently before navigation exposes them.
- Proposed solution: Adds UI APIs, hooks, libraries, shared components,
Tools/Profiles pages, and the plugin settings consumer required by the
new company-scoped API.
- Alternatives considered: keeping #9534 as one 403-file review, or
rewriting the feature to manufacture seams; both were rejected in favor
of path extraction plus compile-driven boundary moves.
- Roadmap alignment: this advances the existing governed MCP/tool-access
work already represented by #9534; it does not introduce a separate
roadmap initiative.
- Stack position: base branch is
`pap10341-split/05-runtime-integration`.
- Merge policy: merge bottom-up, in order, only after the complete
eight-PR stack has been reviewed and the top-of-stack parity gate
remains empty.
- Requested review: UXDesigner sanity pass on Tools/Profile surfaces;
Greptile on every PR.

## What Changed

- Adds UI APIs, hooks, libraries, shared components, Tools/Profiles
pages, and the plugin settings consumer required by the new
company-scoped API.
- Keeps this PR below 100 changed files and independently typecheckable.
- Preserves the final tree from #9534 when combined with the other seven
stack levels.

## Verification

- `pnpm typecheck`
- `pnpm check:token-gates` — all gates clean
- Focused UI Vitest run with `NODE_ENV=test` — 28 files, 183 tests
passed

## Risks

- Large dead-code UI additions can drift from activation routes; PR 7
supplies the registration layer and top-level parity catches omissions.
- Stack risk: merging out of order can expose incomplete layers;
mitigate by following the documented bottom-up merge policy.
- Parity risk: later edits to an intermediate branch can drift from
#9534; mitigate by re-running the empty top-of-stack diff before merge.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex, exact model ID `gpt-5.4`; runtime-managed context
window; medium reasoning with repository, shell, Git, GitHub CLI, and
code-execution tools enabled.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] Internal references are omitted except the execution-plan link
explicitly required for this coordinated split stack
- [x] My branch name describes the change and contains no internal
Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge


## Stack Coordination

- Internal execution plan:
[PAP-13874](/PAP/issues/PAP-13874#document-plan)
- Parity reference: #9534
- Stack: #9556 → #9557 → #9558 → #9559 → #9560 → #9561 → #9562 → #9563
- Merge bottom-up only after full-stack review and an empty parity diff
at #9563.


## UI Evidence

QA captured these from the live Garden MCP split stack at 1440px and
verified clean rendering:

![Profiles
index](https://raw.githubusercontent.com/paperclipai/paperclip/ac72de3ec85feb14c5ec1ed0a3d39b29baa0abff/doc/screenshots/garden-mcp-split-stack/profiles-index.png)

![Profile
wizard](https://raw.githubusercontent.com/paperclipai/paperclip/ac72de3ec85feb14c5ec1ed0a3d39b29baa0abff/doc/screenshots/garden-mcp-split-stack/profile-wizard.png)


![Policies](https://raw.githubusercontent.com/paperclipai/paperclip/ac72de3ec85feb14c5ec1ed0a3d39b29baa0abff/doc/screenshots/garden-mcp-split-stack/policies.png)

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-14 15:31:12 -05:00
Dotta c6d4ee10f7 test: align current-master regression expectations (#9577)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Its server and UI test suites protect company-scoped plugin access
and instance settings behavior
> - Recent governed-access contracts intentionally added company
invocation scope and new experimental-setting defaults
> - Four existing tests were not updated consistently with those
contracts, causing current-master CI failures unrelated to the changes
under review
> - The runtime behavior is intentional, so changing production code
would weaken the new authorization and settings contracts
> - This pull request aligns the stale tests with current behavior and
removes one UI assertion accidentally pulled forward from a later
stacked feature
> - The benefit is a focused, low-risk repair that restores master CI
without changing application behavior

## Linked Issues or Issue Description

- **Bug:** Current master has four regression failures in plugin
authorization, plugin execution-workspace bridging, instance settings
normalization, and experimental settings UI tests.
- **Expected behavior:** Tests provide required company/invocation
scope, use the governed object-shaped secret reference contract, include
all current defaults, and only assert UI controls implemented at this
stack level.
- **Actual behavior:** Tests exercised obsolete request shapes or
expected a later-stack Apps toggle that is not present on current
master.
- **Reproduction:** Run the four test files listed in the Verification
section on master before this commit.

## What Changed

- Updates plugin config authorization coverage to include company scope
and an object-shaped `secret_ref` binding.
- Supplies invocation company scope to execution-workspace host-client
tests.
- Adds `enableApps` and `enableSmokeLab` to normalized settings
expectations.
- Removes the premature Apps toggle UI test introduced without its
later-stack implementation.

## Verification

- `pnpm exec vitest run server/src/__tests__/plugin-routes-authz.test.ts
server/src/__tests__/plugin-execution-workspace-bridge.test.ts
server/src/__tests__/instance-settings-service.test.ts
ui/src/pages/InstanceExperimentalSettings.test.tsx` — 73 tests passed.
- `pnpm exec vitest run
packages/plugins/sdk/tests/host-client-factory.test.ts
server/src/__tests__/plugin-secrets-handler.test.ts
server/src/__tests__/instance-settings-routes.test.ts
ui/src/lib/instance-settings.test.ts` — 39 tests passed.
- `git diff --check` — passed.

## Risks

- Low risk: test-only changes with no production runtime, schema, API,
or UI behavior changes.
- The removed Apps toggle assertion should return in the later stacked
change that introduces the actual control.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex, exact model ID `gpt-5.4`; runtime-managed context
window; medium reasoning with repository, shell, GitHub CLI, and
code-execution tools enabled.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge
2026-07-14 14:03:03 -05:00
DottaandPaperclip 1de0a3bb1e feat(mcp) [split 2/8]: add governed access contracts (#9557)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Governed MCP access spans contracts, runtime enforcement, adapters,
UI surfaces, and operator verification
> - The parity reference PR #9534 is too large for effective automated
or human review
> - The feature therefore needs a linear stack whose individual diffs
stay below the 100-file review limit
> - This pull request is split 2/8 and focuses on database schema and
shared governance contracts
> - The benefit is a standalone, testable review boundary while
preserving byte-for-byte parity at the top of the stack

## Linked Issues or Issue Description

- Related parity reference: #9534
- Problem: The governed access model needs additive persistence and
synchronized shared types before server enforcement can compile.
- Proposed solution: Adds migrations 0148–0169, tool-access and Smoke
Lab schema, shared types/validators/gallery helpers, and the minimal
compile-required contract consumers identified by boundary testing.
- Alternatives considered: keeping #9534 as one 403-file review, or
rewriting the feature to manufacture seams; both were rejected in favor
of path extraction plus compile-driven boundary moves.
- Roadmap alignment: this advances the existing governed MCP/tool-access
work already represented by #9534; it does not introduce a separate
roadmap initiative.
- Stack position: base branch is `pap10341-split/01-demo-servers`.
- Merge policy: merge bottom-up, in order, only after the complete
eight-PR stack has been reviewed and the top-of-stack parity gate
remains empty.
- Requested review: QA for migrations/validators; Greptile on every PR.

## What Changed

- Adds migrations 0148–0169, tool-access and Smoke Lab schema, shared
types/validators/gallery helpers, and the minimal compile-required
contract consumers identified by boundary testing.
- Keeps this PR below 100 changed files and independently typecheckable.
- Preserves the final tree from #9534 when combined with the other seven
stack levels.

## Verification

- `pnpm typecheck` — passed, including migration numbering and safety
checks
- `pnpm --filter @paperclipai/db test` — passed
- `pnpm --filter @paperclipai/shared test` — passed

## Risks

- Migration or contract mistakes could affect every upper layer; all
migrations are additive/idempotent and compile consumers are included in
this boundary.
- Stack risk: merging out of order can expose incomplete layers;
mitigate by following the documented bottom-up merge policy.
- Parity risk: later edits to an intermediate branch can drift from
#9534; mitigate by re-running the empty top-of-stack diff before merge.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex, exact model ID `gpt-5.4`; runtime-managed context
window; medium reasoning with repository, shell, Git, GitHub CLI, and
code-execution tools enabled.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] Internal references are omitted except the execution-plan link
explicitly required for this coordinated split stack
- [x] My branch name describes the change and contains no internal
Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge


## Stack Coordination

- Internal execution plan:
[PAP-13874](/PAP/issues/PAP-13874#document-plan)
- Parity reference: #9534
- Stack: #9556 → #9557 → #9558 → #9559 → #9560 → #9561 → #9562 → #9563
- Merge bottom-up only after full-stack review and an empty parity diff
at #9563.

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-14 12:57:20 -05:00
DottaandClaude Opus 4.8 f49a3f9924 fix(ui): cap live agent-run transcript buffers to bound tab memory (#9569)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Agents stream their run output live into the web UI, viewed per-run
in the `AgentDetail` transcript viewer
> - Browser tabs holding these views were sitting at 8–16 GB of memory
footprint while their JS heap stayed at ~256 MB — a 60×+ gap, meaning
the cost is in retained DOM / render objects, not JS objects
> - The `LogViewer` in `AgentDetail.tsx` kept every streamed
stdout/stderr line and structured event in unbounded React state and
rendered each into a rich DOM block (the default "nice" mode has no
virtualization), so a run streaming for hours grew an unbounded live DOM
tree
> - The sibling `useLiveRunTranscripts` hook (used by `IssueChatThread`)
already bounds its buffers and virtualizes; `LogViewer` bypassed it and
managed its own uncapped state — that inconsistency is the bug
> - This pull request caps the live buffers and bounds the live DOM
render, aligning `LogViewer` with the already-bounded path
> - The benefit is that long-lived streaming tabs no longer grow without
bound, cutting multi-GB tabs back to a bounded footprint

## Linked Issues or Issue Description

No public GitHub issue exists; describing inline per CONTRIBUTING.md →
"Link Issues or Describe Them In-PR", following the bug report template.

**What happened?**

Chrome's Task Manager showed multiple long-lived Paperclip tabs
(agent-run / task views) each consuming 8–16 GB of memory footprint,
while each tab's JS heap stayed at only ~150–256 MB. Memory grew
monotonically the longer a run streamed.

**Expected behavior**

A tab viewing a live agent run should hold a bounded amount of memory
regardless of how long the run streams.

**Steps to reproduce**

Open an agent run with a long-running / high-volume stream in
`AgentDetail`, leave the tab open while output streams for an extended
period, and watch the tab's memory footprint climb without bound in
Chrome's Task Manager.

**Paperclip version or commit**

`3991a19a` (branch `fix/agent-run-transcript-memory`, off `master`).

**Deployment mode**

Local dev (`pnpm dev`), web UI. Not adapter-specific — core UI bug in
the shared transcript viewer.

## What Changed

- Add `ui/src/lib/live-log-buffer.ts`: a pure `appendCapped(prev,
additions, max)` helper plus caps `MAX_LIVE_LOG_LINES=5000`,
`MAX_LIVE_EVENTS=2000`, and `LIVE_TRANSCRIPT_RENDER_LIMIT=1500`, with
rationale documented in the module.
- Add `ui/src/lib/live-log-buffer.test.ts`: 6 unit tests (append,
trim-to-cap, oversized batch, exact-cap, no-mutation, referential
bail-out).
- `ui/src/pages/AgentDetail.tsx` (`LogViewer`): route all four
live-append sites (WebSocket log / progress / event, plus the poll
fallback) through `appendCapped`, and pass
`limit={LIVE_TRANSCRIPT_RENDER_LIMIT}` to `RunTranscriptView` for live
runs so the "nice" view mounts only the most recent blocks.
- The terminated-run "Load more log" pagination is deliberately left
**uncapped** (guarded by `isLive`), so no historical output is lost —
older output remains on the server and reachable there.

## Verification

- `vitest run src/lib/live-log-buffer.test.ts` → 6/6 pass.
- Existing suites `RunTranscriptView.test.tsx`,
`AgentDetail.instructions.test.tsx`, `useLiveRunTranscripts.test.tsx` →
22/22 pass.
- `tsc -b` (UI) → clean.
- Manual/behavioral: live runs tail the last ~1500 blocks; terminated
runs still render full history via "Load more log". Follow-up planned to
profile before/after with the Chrome DevTools MCP.

## Risks

Low risk. Changes only bound **in-memory state for live runs**; the
terminated-run paginated path is untouched (still uncapped, guarded by
`isLive`). No API, schema, or persistence changes. Worst case for a live
run is that only the most recent 5000 lines / 1500 rendered blocks are
visible in the tab — which is the intended "tail" behavior, and full
history remains on the server.

## Model Used

- **Provider:** Anthropic, via the Claude Code CLI.
- **Model:** Claude Opus 4.8 (`claude-opus-4-8`).
- **Reasoning mode:** Extended thinking enabled.
- **Capabilities used:** tool use (shell execution, file editing),
sub-agent fan-out for the codebase memory sweep, and the Chrome DevTools
MCP for the diagnosis phase.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work (the ROADMAP "Memory" item is about company/agent
knowledge, unrelated to this browser-tab memory fix)
- [x] I have searched GitHub for duplicate or related PRs and linked
them above (none found among open PRs)
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have considered and documented any risks above
- [ ] I have updated relevant documentation to reflect my changes (N/A —
no user-facing docs affected; rationale is documented inline in
`live-log-buffer.ts`)
- [ ] All Paperclip CI gates are green (in progress at time of writing)
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
(the only open P2 was this missing template, which this update resolves;
awaiting re-review)
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>
2026-07-14 12:43:05 -05:00
DottaandPaperclip 6f204605ad fix(ui): show source SHA for unreleased builds (#9508)
## Thinking Path

> - Paperclip is the open source control plane people use to manage
AI-agent companies
> - Operators need to identify the exact build running from the
persistent account menu
> - Formal releases already have a concise public version, but source
builds include a long derived version string
> - The derived version identifies a commit but does not expose the
source branch or a direct path to inspect the code
> - Server Git metadata is auth-sensitive, so the UI must also refresh
it when the current session changes
> - This pull request shows linked branch and commit metadata for source
builds while preserving `v<version>` for formal releases
> - The benefit is faster build diagnosis with correct metadata across
sign-in and sign-out transitions

## Linked Issues or Issue Description

### Pre-submission checklist

- [x] I searched existing open and closed issues and found no duplicate
implementing this exact account-menu behavior.
- [x] The behavior reproduces on `master`.
- [x] The behavior originates in Paperclip's core UI, not an adapter,
provider, or local configuration.

### What happened?

Source builds displayed the full derived version, such as
`2026.626.0+58.git.518fc71ce`, without linking the operator to the
corresponding source branch or commit.

### Expected behavior

Source builds should show the concise branch and short commit SHA with
links to GitHub, while formal releases should continue showing their
public version. Auth transitions should refresh the health metadata that
supplies those Git details.

### Steps to reproduce

1. Run Paperclip from a commit after a release tag.
2. Open the account menu.
3. Inspect the build label beneath the user identity.
4. Sign in or out and reopen the menu.

### Paperclip version or commit

Any source build whose server version uses the
`<version>+<count>.git.<sha>[.dirty]` format.

### Deployment mode

Local dev (`pnpm dev`) or authenticated deployments.

### Installation method

Built from source.

## What Changed

- Detect source-derived version strings and render the source branch
plus seven-character commit SHA in `SidebarAccountMenu`.
- Link source branches and commits to the canonical
`paperclipai/paperclip` GitHub repository.
- Extend server Git metadata with the full SHA and expose it through
health/OpenAPI contracts.
- Refresh auth-sensitive health metadata after sign-in and every
sign-out entry point.
- Preserve the existing `v<version>` label for formal releases and add
focused regression coverage.

## Verification

- `pnpm --filter @paperclipai/ui exec vitest run src/pages/Auth.test.tsx
src/components/SidebarAccountMenu.test.tsx
src/components/SidebarServerInfo.test.tsx`
- `pnpm --filter @paperclipai/server exec vitest run
src/__tests__/health.test.ts src/__tests__/server-info.test.ts`
- `pnpm --filter @paperclipai/ui typecheck`
- `pnpm check:token-gates`
- `git diff --check public/master...HEAD`

## Risks

- Low risk: formal release rendering retains the existing fallback
behavior when the source-version pattern does not match.
- Source links assume the build came from the canonical public
repository; fork-only branches or commits may not resolve there.
- Health metadata is invalidated after auth transitions, adding one
bounded refetch so the displayed Git details match the new session.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex using GPT-5.4 with medium reasoning, repository/tool
access, shell execution, and code editing; context-window size was not
exposed by the runtime.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-13 20:55:54 -05:00
Devin FoleyandCody b49d178c46 fix(ui): experiments auto-recovery dialog leaves UI dimmed and locked after enabling (#9513)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Operators tune instance behavior through Settings → Experiments,
where experimental features are toggled on and off
> - The task graph liveness auto-recovery experiment shows a
confirmation dialog (preview of what would be recovered) before it is
enabled
> - After confirming with "Enable only" or "Enable and run", the
dialog's Radix overlay and the `pointer-events: none` body lock were
left behind, dimming the page and blocking all interaction until a
refresh
> - The dialog was unconditionally mounted and only closed inside the
mutation's `onSuccess`, so the overlay teardown depended on the mutation
outcome and could race or never happen
> - This pull request closes the dialog before the mutation fires in
both confirm flows, clears the pending preview alongside the open flag,
and mounts the dialog conditionally so its overlay fully unmounts
> - The benefit is that enabling an experiment behaves like every other
settings change: the dialog goes away, the page stays interactive, and
errors surface in the page-level error banner instead of a dead UI

## Linked Issues or Issue Description

No public GitHub issue exists for this bug; description follows the bug
report template. Refs #4587 (the PR that introduced the configurable
liveness auto-recovery controls this dialog belongs to).

**What happened?** In Settings → Experiments, toggling on "Task graph
liveness auto-recovery" and confirming via "Enable only" left the whole
UI dimmed and unclickable. The dialog content disappeared, but the modal
overlay and the `pointer-events: none` lock on `<body>` remained until a
full page refresh.

**Expected behavior:** Confirming (or dismissing) the auto-recovery
dialog should close it completely and return the page to a fully
interactive state, with the toggle reflecting the new setting.

**Steps to reproduce:**
1. Open Settings → Experiments.
2. Toggle on "Task graph liveness auto-recovery"; the confirmation
dialog with the recovery preview appears.
3. Click "Enable only".
4. The dialog content disappears but the page stays dimmed and nothing
is clickable; refreshing restores the UI and shows the setting was
applied.

**Paperclip version or commit:** master @ 634ae12 · **Deployment mode:**
local instance · **Area:** UI only
(`ui/src/pages/InstanceExperimentalSettings.tsx`).

## What Changed

- Added a `closeRecoveryPreview()` helper that resets both
`previewDialogOpen` and `pendingPreview` together, and used it
everywhere the dialog closes (confirm flows, run-mutation success, and
user dismissal).
- "Enable only" and "Enable and run" now close the dialog *before*
firing the mutation, so overlay teardown no longer depends on the
mutation outcome; mutation errors roll back the optimistic toggle and
surface in the existing page-level error banner.
- The `RecoveryPreviewDialog` is now conditionally mounted
(`previewDialogOpen ? <RecoveryPreviewDialog … /> : null`), guaranteeing
the Radix overlay and body pointer-events lock are fully removed when
closed.
- Added a regression test that walks the real flow — toggle on → preview
dialog appears → "Enable only" — and asserts the update payload, that
the dialog text and `[data-slot="dialog-overlay"]` element are gone, and
that the toggle reads enabled.

Credit: the implementation commit was authored by Cody — thanks! This PR
packages that fix for upstream review.

## Verification

- `pnpm vitest run src/pages/InstanceExperimentalSettings.test.tsx` in
`ui/` — 17/17 tests pass, including the new regression test.
- Independently re-verified beyond the committed assertions: with a
temporary assertion (not committed), confirmed
`document.body.style.pointerEvents` is `none` while the dialog is open
and released after "Enable only" — the actual "can't interact with
anything" symptom, not just overlay DOM removal.
- Manual check: open Settings → Experiments, toggle the auto-recovery
feature, click "Enable only" — the dialog closes, the page stays
interactive, and the toggle shows enabled without a refresh.

## Risks

- Low risk: change is confined to one page component's dialog lifecycle;
no API, schema, or shared-package changes.
- Behavioral shift: the dialog now closes immediately on confirm instead
of staying open with a pending spinner until the mutation resolves.
Errors are still surfaced via the page-level error banner, and the
optimistic toggle rolls back on failure.

## Model Used

- Implementation commit authored by the AI coding agent "Cody"
(Anthropic Claude-based agent). Review, independent verification, and PR
preparation by Claude (Anthropic), model ID `claude-fable-5`, extended
thinking with tool use (code execution, test runs).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Cody <noreply@paperclip.ing>
2026-07-13 11:52:59 -07:00
scotttongandClaude Fable 5 634ae1298f fix(ui): consolidate live/running blues; stop inbox unread badge indenting the row (#9383)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - The web UI leans on a shared design-token + component system so
surfaces stay visually consistent as they grow
> - Two small inconsistencies had crept in: several distinct blues were
used to signal "live/running" agent state across the sidebar, task
header, and chat thread; and in the Inbox an unread task's mark-read dot
was pushing that row's status icon and title one column right of read
rows
> - Both read as "not quite aligned" in daily use and undercut the
polish of the lists work that just landed
> - This pull request consolidates the live/running blues onto one
shared recipe and stops the unread dot from indenting the row
> - The benefit is one consistent "live" blue everywhere and Inbox rows
that line up whether read or unread

## Linked Issues or Issue Description

No public GitHub issue exists for this work; describing inline per the
bug-report template.

- **Problem**: (1) the same concept — an agent actively working —
rendered in three visibly different blues: the sidebar `N live` dot, the
task-detail "Live" badge, and the chat-thread "RUNNING" badge each used
a different token/recipe. (2) In the Inbox, unread rows carry a leading
mark-read dot that occupies the chevron column, but a per-row spacer was
still rendering in that same column — so on unread rows the status icon
+ title were shifted one column (~24px) further right than read rows.
Most visible when grouped by workspace.
- **Steps to reproduce**: open the Inbox with a mix of read and unread
tasks (group by workspace). The unread rows' status icons sit further
right than the read rows'. Separately, compare the blue of the sidebar
`N live` dot, a task's "Live" header badge, and a chat "RUNNING" badge —
they don't match.
- **Expected behavior**: unread and read rows align on the same status
column, with the unread dot centered on the workspace group chevron; and
all three "live/running" affordances share one blue.

## What Changed

- Added a shared `liveBlueBadge` recipe in `ui/src/lib/status-colors.ts`
and pointed the task-detail **Live** badge (`IssueDetail.tsx`) and the
chat-thread **RUNNING** badge (`IssueChatThread.tsx`) at it; removed the
now-redundant `brandChipBadge` usage from the chat thread and a stray
`🔵` breadcrumb prefix.
- Changed the sidebar **`N live`** dot (`SidebarNavItem.tsx`) to the
same `blue-600 / dark:blue-400` as its adjacent label text.
- **Inbox** (`Inbox.tsx`): skip the per-row leading spacer when the
unread mark-read dot is present, so the dot alone fills the chevron
column. Unread rows' status icon + title now sit in the same column as
read rows, and the dot centers on the workspace group chevron.
- **Test** (`Inbox.test.tsx`): added a regression test asserting an
unread leaf row renders the mark-read dot and drops the spacer, while a
read row keeps the spacer.

## Verification

- `pnpm typecheck` — clean (all packages)
- `pnpm check:token-gates` — 3/3 CLEAN
- `cd ui && pnpm vitest run src/pages/Inbox.test.tsx` — 14/14 (includes
the new regression test)
- Full Storybook visual suite (514 stories, both themes) — green locally
(CI cannot run this suite yet — the baseline-manifest archive is
unpublished, a pre-existing condition from #9134)
- Manual (workspace-grouped Inbox, 2× dark): measured the unread badge
center at the same x as the workspace chevron (276 = 276) and the
unread-row status icon at the same x as read-row status icons (292 =
292). Before/after screenshots in a PR comment below.

## Risks

Low risk — presentation only. No data, routing, or state changes. The
blue consolidation is a token/class swap; the Inbox change removes a
redundant spacer element on unread rows only (read rows and
non-grouped/mobile views are unaffected). The unread-row behavior is
covered by the new unit test.

## Model Used

Claude (Anthropic), Opus 4.8 — model id `claude-opus-4-8`; extended
thinking + tool use, driving local verification (typecheck, token gates,
vitest, Playwright visual suite + pixel measurements).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Claude Fable 5 <noreply@anthropic.com>
2026-07-13 08:53:03 -07:00
8a0db228a6 perf(ui): improve Decisions scrolling performance (#9468)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Operators use the Decisions page to review an uncapped attention
feed across active, snoozed, and dismissed items
> - Large feeds mounted every row eagerly, and routine interactions
re-rendered the full queue
> - That made initial paint and scrolling progressively slower as
decision history accumulated
> - This pull request bounds rendering, stabilizes row props, and lets
off-screen rows skip layout and paint work
> - The benefit is a responsive Decisions page even for companies with
large attention histories

## Linked Issues or Issue Description

### What happened?

Opening `/decisions` for a company with a large attention history
eagerly mounted every visible-feed row. Expanding, selecting,
dismissing, snoozing, or restoring an item could also re-render the
entire queue.

### Expected behavior

The page should render a bounded initial window, progressively reveal
more rows near the scroll boundary, and avoid re-rendering unaffected
rows during interactions.

### Steps to reproduce

1. Populate a company with hundreds of attention items.
2. Open `/decisions`.
3. Scroll and interact with individual rows.
4. Observe increasing initial render, layout, paint, and interaction
cost on the previous implementation.

### Paperclip version or commit

Reproduced on `master` before this PR.

### Deployment and installation

Local development, built from source. This is a core UI issue, not
adapter- or database-specific.

### Additional context

Searched open public issues and PRs; no duplicate was found.

## What Changed

- Added a pure `planAttentionRenderRows` helper that allocates one
render budget across active groups and open snoozed/dismissed curtains
in document order.
- Render 50 rows initially and add 100 more when the Decisions page
approaches the scroll boundary.
- Memoized `AttentionQueueRow`, stabilized parent callbacks and inbox
dismissal actions, and passed row items through a shared expand
callback.
- Added `content-visibility: auto` and intrinsic containment so
accumulated off-screen rows avoid unnecessary layout and paint work.
- Added render-plan coverage and a regression test proving identical row
props do not re-render after a parent update.

## Verification

- `pnpm -C ui typecheck`
- `pnpm -C ui exec vitest run src/lib/attention.test.ts
src/components/AttentionQueueRow.test.tsx
src/components/Sidebar.test.tsx src/pages/Inbox.test.tsx` — 96 tests
passed
- `pnpm check:token-gates` — all gates clean

## Risks

- Low risk: the change is UI-only and does not alter API or database
contracts.
- The main behavioral risk is incorrect row-budget accounting across
collapsed groups or open curtains; the pure planner has focused tests
for ordering, truncation, and collapsed/closed sections.
- Progressive rendering means rows beyond the current budget are
intentionally absent until scrolling nears the boundary, matching the
existing Issues list pattern.

> This is a targeted performance fix and does not overlap planned core
feature work in `ROADMAP.md`.

## Model Used

- Anthropic Claude Fable 5 assisted with the implementation using
repository tools and code execution.
- OpenAI Codex `gpt-5.6-sol` prepared and verified the PR with high
reasoning effort, repository tools, shell execution, and
GitHub/Paperclip API access. The runtime did not expose a context-window
size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes (no
documentation changes were required for this UI-only behavior)
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Claude Fable 5 <noreply@anthropic.com>
Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-12 20:44:52 -05:00
DottaandPaperclip e4e12bfb89 fix(workspaces): persist readiness state and validate ports (#9408)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Execution workspaces can run managed services that must report
reliable lifecycle and readiness state
> - Service startup previously waited for readiness before committing
the starting row, making concurrent control actions see stale state
> - Fixed service ports also needed clearer configuration and ownership
diagnostics to avoid cross-workspace collisions
> - This pull request persists startup state before readiness, validates
port ownership, and exposes configurable service ports in the workspace
UI
> - The benefit is dependable service controls and actionable
diagnostics when workspace runtimes start slowly or compete for ports

## Linked Issues or Issue Description

### What happened?

Slow-starting workspace services could remain invisible to concurrent
stop/restart controls until readiness completed, and fixed-port
conflicts lacked enough ownership context for safe repair.

### Expected behavior

A starting service is persisted immediately, control operations can
observe it, configured ports are editable, and conflicts identify the
owning process/workspace.

### Steps to reproduce

1. Configure a workspace service that delays binding its HTTP port.
2. Start the service and immediately request another control action.
3. Observe stale persisted state before this change.
4. Configure two workspaces for the same fixed port and observe limited
conflict diagnostics.

### Paperclip version or commit

`origin/master` at `02e2dd271`

### Deployment mode

Local dev; built from source; not adapter-specific; database-backed
workspace runtime state.

## What Changed

- Commit the `starting` runtime-service row before waiting for readiness
and transition it after the probe completes.
- Add port-owner inspection and cross-workspace conflict details to
local service supervision.
- Preserve configurable runtime service ports through workspace
configuration updates.
- Surface service-port editing and validation in the execution workspace
details UI.
- Add server and UI regression coverage for slow readiness, concurrent
controls, port persistence, and conflict diagnostics.

## Verification

- `vitest --project @paperclipai/server
src/__tests__/workspace-runtime.test.ts
src/__tests__/execution-workspaces-service.test.ts` — 118 tests passed.
- `vitest --project @paperclipai/ui
src/pages/ExecutionWorkspaceDetail.service-ports.test.ts` — 4 tests
passed.
- `node scripts/check-token-gates.mjs` — all token gates clean.

## Risks

- Moderate risk: changes touch workspace service lifecycle persistence
and local process/port inspection.
- No schema migration is required; tests exercise slow readiness,
concurrent control, persisted ports, and cross-workspace conflicts.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex, GPT-5.3 Codex, reasoning with repository tool use and
code execution; context-window size was not exposed by the runtime.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-11 03:02:21 -05:00
DottaandPaperclip 5618ea91f6 fix(ui): wrap company skill source paths (#9405)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Company skills expose their source metadata in a narrow details
sidebar
> - Long filesystem paths and repository locators were truncated, hiding
the part operators often need to distinguish sources
> - The sidebar can preserve the complete value by wrapping at arbitrary
path boundaries instead of ellipsizing it
> - This pull request renders full source paths and repository labels
without widening the layout
> - The benefit is that operators can inspect and copy the actual skill
source from the UI

## Linked Issues or Issue Description

### Pre-submission checklist

- [x] I have searched existing open and closed issues and this is not a
duplicate.
- [x] I can reproduce this on `master`.
- [x] I have confirmed the behavior originates in Paperclip itself, not
an agent adapter, API provider, or local configuration.

### What happened?

Long company-skill source paths and repository locators were truncated
in the skill details sidebar.

### Expected behavior

The complete source value remains visible and wraps within the available
sidebar width.

### Steps to reproduce

1. Open a company skill whose source path is longer than the details
sidebar.
2. View the Source field.
3. Observe that the old UI replaces the middle or end of the value with
an ellipsis.

### Paperclip version or commit

`origin/master` at `02e2dd271`.

### Deployment mode

Local dev (`pnpm dev`).

### Installation method

Built from source (`pnpm dev` / `pnpm build`).

### Agent adapter(s) involved

None; this is a company-skills UI layout issue.

### Logs, configuration, or screenshots

Not applicable; the behavior is directly visible in the Source field.

### Additional context

The narrow sidebar should remain width-constrained. Wrapping
intentionally trades vertical space for full source inspectability.

## What Changed

- Replace source-path truncation with width-constrained arbitrary
wrapping.
- Apply the same wrapping behavior to linked repository/source labels.
- Add a regression test proving the full long path is rendered without
ellipsis.

## Verification

- `vitest --project @paperclipai/ui src/pages/CompanySkills.test.tsx` —
11 tests passed.
- `node scripts/check-token-gates.mjs` — all token gates clean.

## Risks

- Low risk: the change is limited to text layout in the company skill
details view.
- Very long unbroken values may make the Source section taller,
intentionally trading vertical space for inspectability.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex, GPT-5.3 Codex, reasoning with repository tool use and
code execution; context-window size was not exposed by the runtime.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-11 03:02:11 -05:00
Devin Foley 49d1abc458 fix(ui): detail the env unsaved-changes banner and guard against draft loss (#9391)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Instance settings include an Environments section where operators
configure execution environments, each with an environment-variables
editor for run-time bindings
> - The editor showed a bare "Unsaved changes" banner that never said
which variables changed, sometimes appeared the moment a saved config
was opened (a lossy round-trip through the editor's emit rules made
clean values look dirty), and the environment form let you navigate away
without any confirmation, silently dropping the draft
> - Operators could not tell what was unsaved, distrusted the phantom
banner, and lost half-finished environment edits to a stray click — the
agent configuration page already confirms before discarding, so
environments behaved inconsistently
> - This pull request lists the new/edited/removed variable names under
the banner, normalizes both sides of the dirty comparison so saved
values no longer look dirty on open, and confirms before cancel, in-app
navigation, or tab unload while the form has unsaved changes
> - The benefit is that the banner is trustworthy and specific, and
unsaved environment edits can no longer be lost without an explicit
confirmation

## Linked Issues or Issue Description

Related (not fixed by this PR): #8930 introduced the current
environment-variables editor and its unsaved-changes banner; #9386 moved
environment create/edit from a modal to routed pages, which this PR's
navigation guard builds on.

No existing public issue for the defects themselves; described per the
bug report template:

**What happened?**

The environment-variables editor in Environments settings showed a bare
"Unsaved changes" banner with no indication of which variables changed.
For some saved configurations (names with surrounding whitespace,
incomplete secret references, duplicate names differing only by
whitespace) the banner appeared immediately on opening the edit form,
before any user input. Navigating away from the environment form —
cancel, an in-app link, or closing the tab — silently discarded the
draft with no confirmation.

**Expected behavior**

The banner should say which variables are new, edited, or removed; a
freshly opened saved configuration should show no banner; and leaving
the form with unsaved changes should require an explicit confirmation,
consistent with the agent configuration page.

**Steps to reproduce**

1. Open Settings → Instance settings → Environments and edit an
environment whose saved config round-trips lossily (e.g. an env var name
stored with trailing whitespace) — the "Unsaved changes" banner appears
with no user edits.
2. Add or edit a variable — the banner gives no hint of what is unsaved.
3. With a dirty draft, click any in-app link or Cancel — the draft is
dropped with no confirmation.

**Deployment mode**

Self-hosted (local development instance), reproducible on `master`.

## What Changed

- The unsaved-changes banner in `EnvironmentVariablesEditor` now renders
a change summary line — `New: … · Edited: … · Removed: …` — showing up
to three names per group with a `+N more` overflow and the full list in
a `title` tooltip. A rename shows as one addition plus one removal.
- Dirty detection normalizes both the committed value and the draft
through the same rules the editor uses when emitting values (trimmed
names, incomplete secret refs dropped, last-writer-wins on trimmed
duplicates), so a saved config that round-trips lossily no longer shows
a phantom banner on first open.
- The editor exposes an `onDirtyChange` callback and warns via
`beforeunload` while its local draft is dirty.
- The environment create/edit page (`CompanyEnvironments`) tracks a
payload-level baseline fingerprint of the form as initialized and treats
the page as having unsaved changes when the current form differs from it
or the editor draft is dirty. While dirty it confirms ("Discard unsaved
environment changes?") on Cancel, intercepts same-origin in-app link
clicks, and warns on tab unload.

## Verification

- `node_modules/.bin/vitest run
ui/src/pages/CompanyEnvironments.test.tsx
ui/src/components/environment-variables-editor/EnvironmentVariablesEditor.test.tsx`
— 48 tests pass, including new coverage for: the change-summary banner
text, no phantom banner for lossy round-trip values, beforeunload only
while dirty, cancel confirmation on the edit page, and unload/link-click
warnings after edits are staged into the form.
- `tsc -b` in `ui/` passes.
- Manual: edit an environment, add/edit/remove variables, observe the
summary line; click Cancel or an in-app link and observe the
confirmation; save and observe navigation proceeds without prompting.

## Risks

- Low risk, UI-only. The click interceptor is scoped to same-origin
anchor navigation while the environment form page has unsaved changes
and is removed on cleanup; modified-key/middle-button clicks and
external links are left alone.
- The dirty-normalization intentionally ignores differences the editor
could never persist (incomplete secret refs, untrimmed duplicate names);
those were previously reported as unsaved changes that could not be
saved away.

## Model Used

- Claude Fable 5 (`claude-fable-5`, Anthropic) via Claude Code, with
extended thinking and tool use (code editing, test execution).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge
2026-07-10 17:14:28 -07:00
0f9b1d399c fix(ui): make environment edit a routed page (#9386)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Instance settings include an Environments section where operators
configure sandbox/SSH/local execution environments, including
interactive custom-image setup sessions with a browser terminal
> - The environment create/edit form was rendered inside a modal dialog,
so pressing Escape anywhere — including inside the embedded SSH terminal
while capturing a snapshot — closed the whole modal and destroyed the
in-progress session
> - Environment editing is a heavyweight, long-lived flow; losing it to
a reflexive Escape keypress is destructive and surprising
> - This pull request converts environment create/edit from a modal into
routed standalone pages, so Escape no longer dismisses the form
> - The benefit is that terminal sessions and half-completed edits
survive Escape, and the flow gets shareable URLs and normal back/forward
navigation

## Linked Issues or Issue Description

No existing public issue; described per the bug report template:

**What happened?**
While editing an environment's sandbox snapshot in the embedded SSH
terminal, pressing Escape (e.g. to exit a mode inside the terminal)
closed the entire environment edit modal, discarding the setup session
and any unsaved form state.

**Expected behavior**
Escape inside the terminal or form should not dismiss the environment
editor. A heavyweight flow like environment configuration should be a
standalone page where Escape behaves as expected within the focused
widget.

**Steps to reproduce**
1. Open Instance settings → Environments and edit a sandbox environment
2. Start a custom image setup session and focus the browser terminal
3. Press Escape
4. The modal closes and the session context is lost

## What Changed

- Converted the environment create/edit dialog in
`CompanyEnvironments.tsx` into routed pages at
`/company/settings/instance/environments/new` and
`/company/settings/instance/environments/:environmentId/edit`
- Registered the new routes in `App.tsx` and wired breadcrumbs for the
list/create/edit states
- Form state now initializes from the route (create vs edit) instead of
dialog open/close state, and successful saves navigate back to the
environments list
- Updated `CompanyEnvironments.test.tsx` and `CompanySettings.test.tsx`
to render through a router with the new routes and assert against the
routed form page instead of a dialog

## Verification

- `pnpm vitest run ui/src/pages/CompanyEnvironments.test.tsx
ui/src/pages/CompanySettings.test.tsx` — 22/22 passing
- `tsc --noEmit` on the `ui` package — clean
- Behavioral coverage: the updated tests exercise the routed create/edit
pages end to end (open edit via the list, interact with the
setup-session controls on the form page, save navigates back to the
list); with the form no longer in a dialog there is no Escape-close
handler to trigger

## Risks

- Low risk; UI-only routing change. Deep links into the old modal state
do not exist (the modal had no URL), so no redirects are needed
- The edit page resolves the environment from the route param; a
stale/unknown id falls back to the environments list

## Model Used

- Claude (Anthropic), model ID `claude-fable-5` (Fable 5), extended
thinking enabled, agentic tool use via Claude Code

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Cody <cody@paperclip.ing>
Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-10 15:36:03 -07:00
36ec79c196 feat: add attention queue and Decisions surface (#9380)
## Thinking Path

> - Paperclip is the control plane for autonomous AI companies, where
operators need a reliable way to find and act on work awaiting their
input.
> - The attention and issue-thread interaction subsystems expose those
decision points across server APIs and the board UI.
> - The previous navigation and interaction presentation left these
actions fragmented and did not offer a controlled rollout for the
Decisions surface.
> - This branch adds the attention feed, richer interaction cards,
grouping, dismiss/snooze behavior, and a gated Decisions sidebar entry.
> - It also keeps experimental settings and API contracts synchronized,
with an idempotent migration for the new dismissal state.
> - This pull request delivers the complete, tested attention/Decisions
experience as one reviewable unit.

## Linked Issues or Issue Description

- Adds an operator-focused attention queue and Decisions experience:
grouped decision cards, semantic interaction actions, dismiss/snooze
handling, resilient interaction states, and an experimental flag to
control the Decisions navigation entry.


## Feature Context

### Problem or Motivation

Operators currently have to hunt across approvals, interactions, failed
runs, and budget alerts to find decisions that need their action.

### Proposed Solution

Provide a gated Decisions attention queue that groups actionable items,
supports direct resolution, and preserves operator control through
dismiss and snooze actions.

### Alternatives Considered

Keep separate, source-specific views only; this leaves cross-cutting
operator decisions fragmented and harder to prioritize.

### Roadmap Alignment

This improves the V1 control-plane operator workflow by making pending
governed actions discoverable in one company-scoped surface.

## What Changed

- Added server attention-feed services, routes, interaction handling,
dismiss/snooze support, and an idempotent `0145` inbox-dismissal
migration.
- Added shared attention, inbox-dismissal, and experimental-settings
contracts.
- Added Decisions/attention UI, interaction-card states, sidebar
badge/navigation integration, grouping, keyboard support, and Storybook
coverage.
- Added tests for attention behavior, thread interactions, settings
normalization, dismissals, and API behavior.
- Removed generated screenshots from the final PR diff and rebased the
branch onto current `master`.

## Verification

- `pnpm check:token-gates` — passed.
- `pnpm exec vitest run
packages/shared/src/issue-thread-interactions.test.ts
server/src/__tests__/attention-service.test.ts
server/src/__tests__/inbox-dismissals.test.ts
server/src/__tests__/issue-thread-interactions-service.test.ts
server/src/__tests__/issue-thread-interaction-routes.test.ts
ui/src/lib/attention.test.ts
ui/src/components/AttentionQueueRow.test.tsx
ui/src/components/IssueThreadInteractionCard.test.tsx
ui/src/pages/InstanceExperimentalSettings.test.tsx` — passed: 158 tests
across 9 focused files.
- GitHub Actions for `ad636f560`: build and typecheck/release-registry
have passed; remaining general-server and Greptile checks are in
progress.

## Risks

- Moderate: this is a cross-layer attention/interaction feature with a
new migration and navigation behavior.
- The `enableDecisions` experimental setting defaults to off, limiting
rollout impact.
- Existing dismissal data is backfilled to `dismiss`; the migration is
idempotent and uses guarded constraint creation.

> ROADMAP.md was checked; no duplicate planned core feature was
identified. Related open pull requests were searched before opening this
PR.

## Model Used

- OpenAI GPT-5.5 via Codex CLI, with tool use and local code execution.
Context-window size unavailable in this environment.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My public PR branch name describes the change and contains no
internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally; focused tests pass and the remaining
unrelated AWS test failure is documented above
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>
2026-07-10 17:09:57 -05:00
Devin FoleyandClaude d1f6a6850a Fix agent detail URL after agent rename (#9340)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The agent detail page uses route references that can be based on an
agent's URL key.
> - Renaming an agent can change that URL key while the browser is still
on the old route.
> - After save or rollback, refetching the stale route reference can
render an "Agent not found" state even though the agent still exists.
> - This pull request redirects the detail page to the updated canonical
route when the saved agent's route reference changes.
> - The benefit is that agent renames keep users on the same
configuration workflow without landing on a stale URL.

## Linked Issues or Issue Description

- Refs #1848
- Related public search performed for agent rename/not-found issues and
PRs; no closer in-flight PR was found.
- Bug context: after saving a renamed agent or rolling back to a
revision with a different name-derived URL key, the agent detail page
could continue using the old URL and show "Agent not found".

## What Changed

- Added a small route-sync helper that compares the previous and updated
agent route refs after mutations.
- Redirects the agent detail page with `replace: true` when a save or
rollback changes the canonical route ref.
- Removes the stale detail-query cache entry so the old route reference
is not refetched after a rename.

## Verification

- Local outgoing patch scan for common secrets, private paths/emails,
and internal issue/link references: no matches.
- `corepack pnpm install --frozen-lockfile`
- `corepack pnpm --dir ui run typecheck`
- `corepack pnpm --dir ui exec vitest run
src/pages/AgentDetail.progress.test.ts src/App.test.tsx`
- `corepack pnpm check:token-gates`

## Risks

- Low risk: the redirect only runs when the updated agent resolves to a
different route ref than the current agent.
- If a future mutation response omits both URL key and name, the
existing route-ref fallback behavior still applies.

## Model Used

OpenAI Codex, GPT-5 coding agent via the local Codex adapter, with
tool-assisted repository inspection, shell execution, and GitHub API
use.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Claude <noreply@paperclip.ing>
2026-07-10 14:45:42 -07:00
Devin Foley 17dde9d3f2 fix(sandbox): keep custom-image snapshots applied to config tests, probes, and saves (#9385)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Sandbox environments can capture reusable custom images (provider
snapshots) so agents boot with pre-installed tools and CLI logins
> - The custom-image runtime fingerprint check included provider
secret-ref paths (e.g. the Daytona `apiKey`), while capture-time
fingerprinting excluded them, so any config carrying a credential never
matched its captured snapshot
> - As a result, agent config tests and environment probes silently
booted the provider base image instead of the snapshot, test sandboxes
were deleted before operators could inspect them, and any environment
save orphaned the snapshot without warning
> - The UI compounded the confusion by displaying an internal template
id that matches nothing in the provider dashboard
> - This pull request aligns runtime fingerprints with capture-time
exclusions, re-stamps fingerprints on saves that cannot affect the
snapshot (warning when they can), archives test/probe sandboxes instead
of deleting them, and surfaces the provider snapshot ref in the UI
> - The benefit is that custom images actually apply to config tests and
probes, survive unrelated config edits, and are debuggable against the
provider dashboard

## Linked Issues or Issue Description

No public GitHub issue exists for this; describing it in-PR per the bug
template. Related: Refs #9329 (saved-environment probe company context —
this branch carries an equivalent fix), Refs #8794 (introduced reusable
sandbox custom images).

**What happened?**

With a Daytona environment whose provider config stores the API key as a
secret reference and an active captured custom-image snapshot:

- Agent config tests and environment probes booted the provider base
image (`daytonaio/sandbox:0.8.0`) instead of the captured snapshot, so
CLI upgrades/logins baked into the snapshot were missing and the probe
reported "login required" and an outdated CLI.
- The environment card showed an internal template id (e.g.
`b5be03e1-ca5…`) that does not correspond to any snapshot name in the
provider dashboard, making the active image impossible to correlate.
- Test/probe sandboxes were deleted immediately after the run, so the
sandbox a test used could not be inspected afterwards.
- Saving the environment config (even fields unrelated to the image)
changed the stored fingerprint, silently detaching the snapshot with no
warning.

**Expected behavior**

Config tests and probes boot the captured snapshot when one is active;
the UI shows the provider-facing snapshot/template ref; test sandboxes
stay inspectable for a short window; unrelated config edits keep the
snapshot linked, and edits that genuinely invalidate it produce an
explicit warning.

**Steps to reproduce**

1. Configure a sandbox environment on Daytona with the API key stored as
a company secret reference.
2. Capture a custom image snapshot from the environment page and mark it
active (e.g. after installing/logging into a CLI in the setup sandbox).
3. Run the agent config test or an environment probe: the sandbox boots
the base image, not the snapshot, and the sandbox is deleted immediately
after the test.
4. Save the environment config with an unrelated field change: the
snapshot silently stops applying.

**Paperclip version or commit**

`master` at the merge-base of this branch.

**Deployment mode**

Self-hosted local instance (macOS, pnpm dev server) with the Daytona
sandbox provider plugin.

## What Changed

- Runtime custom-image fingerprint checks now exclude provider
secret-ref paths, matching capture-time exclusions, so configs carrying
credentials match their captured snapshots
(`environment-custom-image-runtime.ts`).
- Agent config tests and saved-environment probes force fresh,
non-reused sandboxes and pass company context so lease-backed probes can
resolve company secrets and boot the real snapshot
(`environment-probe.ts`, `routes/agents.ts`, `routes/environments.ts`).
- Test/probe sandboxes are released by archiving (stop + 60-minute
provider-side auto-delete) instead of immediate deletion, so operators
can inspect the exact sandbox a test used (Daytona plugin).
- On environment PATCH save, changes that cannot affect the captured
snapshot re-stamp the template's source fingerprint so the snapshot
stays linked; boot-source or provider-identity changes (new manifest
field `templateIdentityPaths`) mark the template detached and the save
response reports it (`environment-custom-images.ts`, shared plugin
types/validators).
- The custom-image overview exposes `activeTemplateMatchesConfig`; the
environments UI shows the provider snapshot/template ref (internal id
moved to a tooltip), warns via toast when a save detaches the snapshot,
and shows a persistent "Not in use" warning when the active template no
longer matches the saved config (`CompanyEnvironments.tsx`,
`api/environments.ts`).

## Verification

- `pnpm vitest run
server/src/__tests__/environment-custom-images-service.test.ts
server/src/__tests__/environment-probe.test.ts
server/src/__tests__/environment-routes.test.ts
server/src/__tests__/agent-test-environment-routes.test.ts` — server
coverage for fingerprint exclusions, re-stamp/detach on save, probe
company context, and fresh-sandbox test behavior.
- `pnpm vitest run
packages/plugins/sandbox-providers/daytona/src/plugin.test.ts` —
archive-on-release and snapshot ref handling.
- `pnpm vitest run ui/src/pages/CompanyEnvironments.test.tsx` — snapshot
ref display, detach toast, and "Not in use" warning.
- Manually verified end-to-end on a live self-hosted instance against
real Daytona: config test boots the captured snapshot (CLI login and
version persist), the test sandbox remains visible in the provider
dashboard as archived, and saving unrelated fields keeps the snapshot
applied.

## Risks

- Fingerprint exclusion widening: a provider credential rotation alone
no longer detaches a captured snapshot; that is the intended behavior
(the snapshot content does not depend on the credential), and
provider-identity fields (e.g. Daytona `apiUrl`) still detach via
`templateIdentityPaths`.
- Archived test sandboxes consume provider-side resources for up to
their auto-delete window instead of being freed immediately; bounded (60
minutes) and only for test/probe sandboxes.
- New optional manifest field `templateIdentityPaths` is
backward-compatible; providers that omit it keep current matching
behavior.

## Model Used

- Claude Fable 5 (`claude-fable-5`), extended thinking, agentic tool use
via Claude Code / Claude Agent SDK.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge
2026-07-10 14:32:47 -07:00
70ce005bef Ensure worktree execution starts only after activation (#9374)
## Thinking Path

> - Paperclip is the open-source control plane people use to manage AI
agents and their work.
> - Its scheduler, routines, and heartbeat services decide when agents
automatically begin work.
> - Experimental per-worktree execution is useful for isolated
development, but enabling it previously allowed automatic services to
consider an existing backlog.
> - A worktree activation must therefore create a durable eligibility
boundary rather than merely toggle execution on.
> - This pull request records an activation cutoff and applies it
consistently to automatic routine and heartbeat dispatch.
> - The result is that an enabled worktree executes only work created
after its own activation, while non-worktree behavior remains unchanged.

## Linked Issues or Issue Description

**Problem type:** Bug / safety regression

**Summary:** Enabling experimental run execution in an existing worktree
could start automatic scheduler, routine, watchdog, and heartbeat
activity for work created before that worktree was explicitly armed.

**Expected behavior:** A worktree that has execution enabled only
considers automatically dispatched work created on or after its
activation timestamp. Ambiguous activation state fails closed.
Non-worktree instances keep their existing behavior.

**Related public work:** Refs #8275 (runtime worktree policy gating);
this PR adds an activation-time boundary for automatic execution rather
than changing the general runtime policy.

## What Changed

- Persist a worktree execution activation timestamp and originating
instance ID; stamp them only when the experimental toggle changes from
disabled to enabled.
- Resolve activation state fail-closed when the cutoff is missing,
invalid, disabled, or belongs to another instance.
- Gate automatic routine scheduling, webhooks, watchdog activity, and
heartbeat selection at the activation cutoff; manual runs remain
available.
- Share the canonical worktree truthy-environment helper across routine
dispatch and agent inbox filtering.
- Add cutoff and truthy-runtime regression coverage, plus
experimental-settings UI states that explain armed and suppressed
execution.

## Verification

- `pnpm exec vitest run server/src/__tests__/routines-service.test.ts
server/src/__tests__/instance-settings-service.test.ts` — passes: 2
files, 60 tests.
- `pnpm --filter @paperclipai/server typecheck` — passes.
- Existing CI completed successfully before the follow-up review fixes;
this branch was rebased onto the latest `origin/master` before
retesting.

## Risks

- **Behavioral:** Automatic worktree execution is intentionally more
restrictive; pre-existing work is suppressed until newly created after
activation.
- **Operational:** A malformed or cross-instance activation record fails
closed, requiring an operator to disable and re-enable the experimental
toggle on the intended worktree.
- **Compatibility:** The worktree environment now accepts all canonical
truthy values (`1`, `true`, `yes`, and `on`) consistently; non-worktree
instances are unaffected.
- **Branch metadata:** This existing execution-workspace branch predates
the current naming rule and cannot be renamed under this task's
workspace contract; the code and PR title do not include internal ticket
references.

> `ROADMAP.md` was checked; this targeted execution-safety fix does not
duplicate planned core work.

## Model Used

- Anthropic Claude Code — assisted with the original implementation;
exact model identifier and context window were not recorded in the
repository metadata.
- OpenAI Codex CLI — assisted with PR preparation and review fixes;
exact model identifier and context window are not exposed in this
execution environment. Used with terminal tooling, code editing, and
targeted test execution.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [ ] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>
2026-07-10 16:11:26 -05:00
DottaandPaperclip 991279f52c Fix Skill Studio markdown dirty tracking (#9356)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Skill Studio is the UI surface for editing skill package files,
including `SKILL.md`.
> - Markdown files are split into frontmatter fields plus a rich
markdown body editor.
> - The dirty-state guard intentionally ignores markdown editor
normalization during initial mount.
> - That guard was too narrow: rich markdown body edits could happen
before the file was marked as user-interacted, so edits did not reliably
enable Save.
> - This pull request broadens the user-interaction signals around the
markdown body editor and adds a regression test for saving body edits.
> - The benefit is that editing `SKILL.md` in Skill Studio now behaves
like normal file editing: changes show as unsaved and Save persists the
full markdown document.

## Linked Issues or Issue Description

No public GitHub issue exists. Inline bug description follows.

### What happened?

Editing a Skill Studio markdown body did not reliably mark the file
dirty, so the Save action could remain unavailable or fail to persist
the body edit.

### Expected behavior

User edits in the markdown body editor should mark the file unsaved and
allow saving the updated `SKILL.md` content.

### Steps to reproduce

1. Open a Skill Studio markdown file such as `SKILL.md`.
2. Edit the markdown body in the rich editor.
3. Observe whether the unsaved state appears and Save becomes enabled.
4. Save and reload the file.

### Paperclip version or commit

Reproduced on `master` before this fix.

### Deployment mode

Local dev (`pnpm dev`).

## What Changed

- Mark markdown body interaction on capture-phase key, pointer, paste,
drop, before-input, and input events around the rich editor.
- Preserve the existing guard that prevents MDXEditor mount-time
normalization from dirtying a clean file.
- Add a Skill Studio regression test that edits the markdown body,
observes the Unsaved state, enables Save, and verifies the saved
`SKILL.md` includes both frontmatter and the edited body.

## Verification

- `pnpm vitest run ui/src/pages/SkillStudio.test.tsx`

Manual reviewer path:

- Open a Skill Studio markdown file such as `SKILL.md`.
- Edit the body text in the rich markdown editor.
- Confirm the UI shows an unsaved state and the Save button is enabled.
- Save and confirm the updated markdown body persists.

## Risks

Low risk. The change only broadens interaction detection before applying
existing dirty-state logic, and the guard still prevents initial editor
normalization from marking an unopened file dirty.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

OpenAI Codex CLI using GPT-5, with repository file editing, shell
execution, and GitHub CLI tool use.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-10 09:41:24 -05:00
5c85ae64a0 Cases: experimental first-class case object (#9198)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The board currently uses issues for execution, but longer-lived
content work needs a separate object that can survive beyond a single
task thread.
> - The Cases subsystem adds an experimental, company-scoped record for
content artifacts and their supporting metadata.
> - The backend needs durable storage, API routes, revision history,
issue linkage, and company-boundary enforcement before the UI can depend
on Cases.
> - The UI needs an opt-in navigation surface, list/detail views,
reference chips, and issue-page context so operators can inspect Cases
without making them the default workflow.
> - The agent-facing skills need a contract for creating and updating
Cases so automated content workflows can dogfood the feature.
> - This pull request ships that experimental end-to-end path behind the
`enableCases` flag.
> - The benefit is a first-class place to collect content work,
references, attachments, revisions, and related execution threads
without polluting the core issue model.

## Linked Issues or Issue Description

No public GitHub issue exists for this experimental feature.

Feature request fields:

### Problem

Content-oriented work such as release notes, announcements, docs, and
campaigns can span many execution issues, which makes the final artifact
hard to find and reason about after the execution thread moves on.

### Proposed solution

Add an experimental Cases object that is company-scoped, linked to
issues, queryable through the API, inspectable in the board UI, and
writable by agent workflows through documented conventions.

### Alternatives considered

Continue encoding content artifacts directly in issues or documents
only. That keeps the data model smaller, but it does not give operators
a stable artifact-centric view or a clean way to link related execution
history.

### Roadmap alignment

Checked `ROADMAP.md`; this PR does not duplicate an existing planned
core roadmap item.

## What Changed

- Added the `cases` data model, migration, schema exports, and
experimental `enableCases` instance setting.
- Added company-scoped Cases API routes for list/detail/update, issue
links, revisions, children, activity events, annotations, attachments,
and idempotent agent-oriented upserts.
- Scoped case and issue lookup helpers before access checks so
inaccessible cross-company identifiers resolve as not found rather than
leaking existence.
- Fixed case PATCH timestamp handling so non-status updates cannot
overwrite `completedAt` from a stale pre-transaction row snapshot.
- Moved Cases list type/status/project filters into the server request
before the server-side limit is applied, including multi-select filters
and no-project filtering.
- Added backend route coverage for creation, updates, idempotency, issue
linking, attribution, company-boundary enforcement, OpenAPI
registration, list filtering, timestamp patch behavior, and inaccessible
lookup regressions.
- Added the experimental Cases UI surface: sidebar entry, gated routes,
list filters/grouping, detail overview, activity, revisions, children,
attachments, and issue-page case rail.
- Added case reference rendering and company-prefixed case href
generation so case links resolve directly inside the active company
route.
- Added Paperclip skill documentation for agent workflows that create or
update Cases.
- Wired release-content skills to emit Cases for dogfooding.
- Rebased onto current `master` and renumbered the Cases migrations to
`0143`/`0144` after the latest upstream migration sequence.

## Verification

- Current PR head: `ecc13be0d`.
- Rebased on current `master` (`606aa4f266`) and pushed to the existing
PR branch.
- `git diff --check origin/master...HEAD` — passed before the first
update push; subsequent committed diffs were also checked with `git diff
--check` before commit.
- Guardrails checked: no `pnpm-lock.yaml` changes, no
`.github/workflows` changes, and changed-file count is below the
Greptile 100-file limit.
- `pnpm --filter @paperclipai/server exec vitest run
src/__tests__/cases-routes.test.ts
src/__tests__/instance-settings-service.test.ts
src/__tests__/openapi-routes.test.ts` — passed, 3 files / 26 tests
before review-fix commits.
- `pnpm --filter @paperclipai/server exec vitest run
src/__tests__/cases-routes.test.ts` — passed after each server-side
Greptile fix, latest 1 file / 15 tests.
- `pnpm --filter @paperclipai/server typecheck` — passed after the
timestamp and lookup fixes.
- `pnpm --filter @paperclipai/ui exec vitest run
src/pages/Cases.test.tsx src/pages/CaseDetail.test.tsx
src/pages/CompanySkills.test.tsx src/App.cases-routing.test.tsx` —
passed, 4 files / 30 tests before review-fix commits.
- `pnpm --filter @paperclipai/ui exec vitest run
src/pages/Cases.test.tsx` — passed after the list-filter fix, 1 file /
12 tests.
- `pnpm --filter @paperclipai/ui typecheck` — passed after the
list-filter fix.
- `pnpm check:token-gates` — passed after UI changes.
- Remote PR checks on head `ecc13be0d` are green: Paperclip CI, build,
typecheck, test matrix, e2e, Canary Dry Run, policy, commit review,
Superagent Security Scan, Socket, Snyk, and Greptile passed; Storybook
visual regression is skipped and security-review is neutral.
- Greptile Review: 5/5 confidence, zero unresolved Greptile threads.

## Risks

- Medium feature risk because this introduces a new experimental domain
object across database, server, shared contracts, skills, and UI.
- The feature is gated behind `enableCases`, which limits default
operator exposure while the model is exercised.
- Case links now prefer company-prefixed hrefs; the unprefixed redirect
remains for externally entered URLs.
- Cases list filtering now sends multi-select filters to the server
before limiting; the UI still applies the same local filters as a second
pass for ancestor/context rows.
- Migrations were renumbered on top of current master; the SQL uses
guarded `IF NOT EXISTS` / `ADD COLUMN IF NOT EXISTS` patterns where
relevant for safer replay.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

OpenAI GPT-5 Codex in the Paperclip local coding environment was used
for this PR curation, rebase verification, review-fix implementation,
push, and PR description update. The runtime exposes tool use and shell
execution; context-window size is not exposed by this Paperclip adapter.
Several implementation commits also include AI co-author trailers
recorded in git history.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I searched the GitHub PR list for similar PRs and confirmed this
is not a duplicate
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [ ] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>
2026-07-09 22:11:03 -05:00
DottaandPaperclip 9a1d4b7983 fix(ui): use prose editor for markdown agent instructions (#9332)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Agent setup depends on instruction files that are readable and
editable from the board UI
> - The instructions tab already receives server-side metadata
describing whether each file is Markdown
> - The UI was deciding Markdown editor usage primarily from the file
extension, which makes extensionless Markdown instruction files feel
like raw code
> - This pull request makes the instructions editor trust server
Markdown metadata for existing files and keep extension fallback only
for new unsaved files
> - The benefit is that AGENTS-style prose instructions render and edit
like prose while explicitly non-Markdown files still use the raw
textarea

## Linked Issues or Issue Description

- Refs #8201
- Refs #5652
- Refs #3427
- Refs #2068
- Related PRs: #2468, #2620

## What Changed

- Use server `markdown` metadata from instruction file details/summaries
to choose the prose Markdown editor for existing instruction files.
- Keep extension-based Markdown detection only for pending new files
before server metadata exists.
- Remove the monospace content styling from the Markdown editor path so
prose instructions read like normal text.
- Add focused tests for extensionless Markdown files, new `.md` files,
and `.md` files explicitly marked non-Markdown by the server.

## Verification

- `pnpm check:token-gates`
- `pnpm exec vitest run ui/src/pages/AgentDetail.instructions.test.tsx`
- `pnpm --filter @paperclipai/ui typecheck`

## Risks

- Low risk. The editor selection now depends on server metadata for
existing files, so incorrect server metadata would choose the wrong
editor. The fallback still preserves extension-based behavior for newly
created unsaved files.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI GPT-5 via Codex coding agent, tool-enabled terminal workflow.
Context window details were not exposed by the runtime.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-09 19:43:44 -05:00
606aa4f266 feat(search): filters, sorting, operators & command-palette parity (#9327)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Company search is the primary way operators find issues, comments,
documents, artifacts, agents, and projects across a busy company
> - Search previously supported only a bare text query: no way to narrow
by status/assignee/project/label/date, no sort control, no typed
operators, and weak relevance/snippets meant hunting through noise
> - As companies accumulate tens of thousands of items, unfiltered
single-sort search stops scaling for day-to-day operator workflows
> - This pull request adds a full filtering model (filter bar, chips,
mobile sheet, URL state), sort modes, typed query operators (`status:`,
`assignee:`, `type:`, …) with command-palette parity,
relevance/snippet/deep-link improvements, zero-results recovery, and the
supporting shared validators, backend service work, and DB indexes
> - The benefit is that operators can go from a vague query to the exact
item in a couple of keystrokes, on desktop and mobile, with shareable
filtered-search URLs

## Linked Issues or Issue Description

No existing public GitHub issue; describing the underlying feature
request inline (per feature_request template):

- **Problem:** Company search accepted only a plain text query. Users
could not filter results by status, assignee, project, label, or
recency; could not change result ordering; and got no guidance when
filters emptied the result set.
- **Desired solution:** Structured search filters (UI controls + typed
query operators + URL parameters), selectable sort modes, better
relevance and snippets with exact deep links, and parity between the
search page and the command palette.
- **Alternatives considered:** Client-side filtering of unfiltered
results (does not scale past the fetch limit); a separate "advanced
search" page (splits the surface and duplicates state handling).

Related (not duplicate) PRs found while searching: #4848 (issue search
query planning), #8235 (search rate limiting).

## What Changed

- **Shared contract:** new search filter/sort/count/zero-results types
and validators in `packages/shared` (`validators/search.ts`, types
index).
- **Backend:** `server/src/services/company-search.ts` supports issue
filters, sort modes, per-filter option counts, snippets, artifact
visibility, and zero-results loosen suggestions; single-statement match
replaces per-scope scans and predicates are trigram-index compatible
(~3.7s → ~350ms on a live 14.8k-hit corpus).
- **DB:** migration `0142_company_search_sort_indexes.sql` adds the
supporting indexes.
- **Search page (`ui/src/pages/Search.tsx`):** filter bar, removable
chips, mobile filter sheet with result-count preview, sort menu, URL
round-tripping, zero-results recovery UI.
- **Query operators (`ui/src/lib/search-query-parser.ts`):** typed
operators parsed into filters, operator autocomplete, filter pills.
- **Command palette:** operator-aware parsing and full-search handoff.
- **Stale-operator fix (latest commit):** typed operator filters are no
longer folded into persistent URL-filter state, so deleting a token
(e.g. removing `status:blocked` from the input) actually removes the
filter from subsequent requests; filter-control edits materialize
control state and strip typed tokens so a removed chip cannot resurrect
from the input.

## Verification

- `cd ui && npx vitest run src/pages/Search.test.tsx` — 19 tests
including two new red→green regressions for the stale-operator paths
(both fail on the previous commit, pass now).
- `cd ui && npx vitest run src/components/CommandPalette.test.tsx` and
`cd server && npx vitest run
src/services/company-search-service.test.ts` — operator parity and
backend filter/sort/count coverage.
- `cd ui && npx tsc --noEmit` — clean.
- Manual: open `/search`, type `auth status:blocked`, confirm the status
filter applies; delete `status:blocked`, confirm results are unfiltered
again; drive the same filters from the filter bar/chips/mobile sheet and
confirm the URL round-trips (reload/back/forward preserves state).
- Full end-to-end QA pass (9/9 acceptance checks) against the wireframes
on desktop (1280px) and mobile (390px) with a live API and browser
automation.

## Risks

- Additive migration (indexes only, no data rewrites) — safe to roll
forward; index creation cost is paid once at migrate time.
- Search request shape gains optional parameters only; old clients keep
working.
- Behavioral shift: filter-control edits now strip typed operator tokens
from the query text (their values persist as filter state) — deliberate,
so removed filters stay removed.
- Ranking changes alter result ordering for existing queries; covered by
service tests and the QA pass.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- Claude Fable 5 (`claude-fable-5`, Anthropic, extended thinking + tool
use) — stale-operator-filter fix, regression tests, PR preparation.
- GPT-5 Codex (`codex_local` adapter) and Claude Opus 4.6
(`claude-opus-4-6`) — earlier implementation phases (backend contract,
filter UI, operators, ranking) under agent orchestration.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [ ] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
— pre-existing branch name retained to avoid closing/reopening the PR
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes (no
user-facing docs affected)
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green (pending re-run on latest commit)
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
(pending re-review of the stale-filter fix)
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>
2026-07-09 19:32:58 -05:00
f3ca4d24bc fix: repair dirty/foreign-branch execution worktrees (#9297)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Execution workspaces are the bridge between Paperclip's control
plane and a local agent's checked-out repository state.
> - When a workspace is restored after a failed or interrupted run, the
recorded branch can disagree with the branch currently checked out on
disk.
> - A clean branch mismatch can be reconciled safely, but a dirty
mismatch needs a lossless path that does not discard uncommitted agent
work.
> - This pull request adds a quarantine-and-restore path that saves
dirty work to a rescue branch, restores the recorded branch, and exposes
the repair from the board UI and run page.
> - The benefit is that operators can recover wedged execution
workspaces without losing work or moving another live branch
unexpectedly.

## Linked Issues or Issue Description

No public GitHub issue exists for this workspace-recovery failure, so
this PR includes the bug report inline.

**What happened**

A git worktree-backed execution workspace could become wedged when
Paperclip expected one branch but found a different checked-out branch
with dirty tracked or untracked files. The existing safe repair path
refused the restore, leaving the source task blocked with no lossless
one-click recovery path.

**Expected behavior**

Paperclip should preserve dirty work before restoring the recorded
workspace branch. If another live workspace claims the checked-out
branch, or an attached runtime service is active, the repair should
refuse with clear operator-facing evidence instead of risking work loss
or file contention.

**Steps to reproduce**

Create a git worktree execution workspace whose persisted branch name
differs from the checked-out branch, add dirty tracked or untracked
files in that worktree, then trigger workspace validation or use the
branch reconcile endpoint. Before this change, the dirty mismatch
remained blocked because Paperclip had no quarantine restore mode.

**Paperclip version or commit**

Observed on the pre-fix workspace-recovery implementation. Verified on
this PR head after rebasing onto current `master`.

**Deployment mode**

Local trusted development/worktree deployments using git worktree
execution workspaces and optional workspace runtime services.

## What Changed

- Added dirty-worktree quarantine repair that creates a rescue branch,
commits dirty tracked and untracked files there, restores the recorded
branch, writes audit comments/activity, and preserves the live foreign
branch ref.
- Added `quarantine_restore` branch reconcile API support,
recovery-action resolution, source-task wake behavior, execution-review
preservation, claimant refusal, runtime-service refusal, and coverage
for the non-transactional git ordering.
- Added board UI controls for the repair action in the recovery card
plus a compact failed-run workspace recovery surface that uses the same
reconcile handlers.
- Hardened Greptile follow-up cases by best-effort restoring the
recorded branch after a mid-sequence rescue commit failure and by
refusing quarantine restore while attached runtime services are active.

## Verification

- `pnpm exec vitest run
server/src/__tests__/execution-workspaces-service.test.ts -t
"quarantine_restore"`
- `pnpm exec vitest run server/src/__tests__/workspace-runtime.test.ts
-t "workspace dirty quarantine branch repair"`
- `pnpm exec vitest run
server/src/__tests__/heartbeat-workspace-finalize-branch.test.ts -t
"repairs clean unrecorded branch drift|adopts unrecorded forward branch
drift"`
- `pnpm exec vitest run
server/src/__tests__/workspace-runtime-routes-authz.test.ts`
- `pnpm --filter @paperclipai/server typecheck`
- Earlier PR verification covered the route, service, heartbeat, UI
component, and run-page recovery surfaces; Cutter posted public preview
screenshots for the repair popover and run-page panel at
https://github.com/paperclipai/paperclip/pull/9297#issuecomment-4926934211.
- GitHub PR checks are green on
`dcac76b05f4cf6e1ee16544c2831d83c7857e475`.
- Greptile is 5/5 with zero annotations and no unresolved review threads
on `dcac76b05f4cf6e1ee16544c2831d83c7857e475`.

## Risks

- Moderate risk because the change intentionally runs git commands
against local worktrees; the implementation refuses dirty repair when
another claimant or active runtime service is detected and records
rescue refs for auditability.
- Compatibility / release-note callout for self-hosted operators:
existing instances that left `enableWorkspaceBranchReconcileForward`
unset now get automatic forward branch reconciliation during heartbeat
workspace recovery. Operators who want the previous advisory-only
behavior can set `experimental.enableWorkspaceBranchReconcileForward` to
`false`; dirty quarantine repair can likewise be disabled with
`experimental.enableWorkspaceDirtyQuarantineRepair: false`.
- If the git rescue succeeds but a later database write fails, the
worktree may already be restored while the recovery action remains open;
this ordering is documented in code because git side effects cannot
participate in the database transaction.
- UI risk is limited to the workspace recovery surfaces and covered by
component tests plus the existing Cutter visual preview.

## Model Used

OpenAI Codex coding agent based on GPT-5, with repository tool use,
shell execution, and local test execution. Earlier preserved commits on
this branch also show Claude Code / Claude Opus 4.8 assistance in their
commit metadata.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] Branch naming exception documented: this PR preserves the existing
worktree branch requested for publication while keeping the PR title and
body public-facing
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>
2026-07-09 18:19:49 -05:00