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Author SHA1 Message Date
DottaandPaperclip cd12432947 fix(runner): recognize verified task document evidence (#18661)
## Thinking Path

> - Paperclip manages AI agents and keeps their results attached to
tasks.
> - Native tools return links to saved task documents.
> - Completion feedback asks agents to include those links.
> - The file-delivery validator treated every such relative link as a
workspace path.
> - A valid document and CSV result could therefore fail completion when
it cited the supplied document link.
> - This change derives document links from the same verified
publication projection for guidance and validation.
> - Requested files still need their own verified delivery evidence.

## Linked Issues or Issue Description

**What happened?**
The native document tool and completion feedback produce a link such as
`/EX/issues/EX-1#document-output`. When a task also requests a
downloadable CSV, citing that link causes completion to reject it as a
workspace-only file. This occurs even when the document is published and
the file has a valid current-run delivery receipt.

**Expected behavior**
Accept a server-derived document link only when it names the current
company/task and a currently attached revision with a matching native
publication receipt. Keep the separate requested-file requirement and
all foreign, stale, missing, and workspace-file guards.

**Steps to reproduce**
1. Save a task document through the native `write_document` tool.
2. Publish a CSV through `register_deliverable`.
3. Ask completion feedback for the final-response guidance.
4. Cite its returned document link alongside the file receipt in the
next completion report.
5. The old validator rejects the valid document link as a workspace-only
file.

**Paperclip version or commit**
Current source checkout. The regression exercises the real native
document producer and completion validator.

**Deployment mode**
Local source verification on macOS arm64 with Node 24.22.1, pinned pnpm
9.15.4, locked dependencies, temporary PostgreSQL, and a controlled
remote file-reader boundary. No live provider or hosted deployment is
included.

## What Changed

- Derive the canonical document href in the existing
company/task/current-revision publication query.
- Use that same verified href in completion guidance and reference
validation.
- Keep file registration and hash/size receipt requirements separate
from document evidence.
- Cover evidence, artifact, and criterion references; foreign
companies/tasks; bogus keys; local paths; and lost current-revision
publication proof.
- Exercise actual native document writes and CSV registration, including
attachment download query and fragment links.
- Update the execution contract and the document feature/access maps.

## Verification

- Red before the production edit: native completion generated a real
saved-document link, then rejected the same link alongside a valid
published file. The failure was the workspace-only-file guard.
- Green: 210 tests across native completion feedback, explicit output
validation, and the existing native file-handoff suite pass. These use
real PostgreSQL and native tool receipts; the remote file reader is
controlled.
- A saved document link alone still fails the explicit CSV requirement.
A document whose current revision lacks its publication receipt is
rejected. Foreign task/company links, missing keys, malformed links, and
workspace paths remain rejected.
- Full workspace typecheck, server typecheck, and production build pass.
- `node scripts/check-maps.mjs`, `node
scripts/check-module-boundaries.mjs`, and `git diff --check` pass. Map
checks establish structure only.
- Full `pnpm test:run` is running separately. There is no full-suite
verdict yet. CI and review are pending.
- Hosted acceptance and any recovery of existing tasks remain separate
steps. This PR does not change final-response recovery or scheduling.

## Risks

- An overly broad URL exception could admit foreign or unpublished
output. The validator accepts only exact hrefs from the authenticated
publication projection.
- Document evidence could hide a missing requested file. A separate
regression keeps that delivery gate effective.
- The shared projection adds current task/company joins. Existing
document feedback and publication tests cover those consumers.

## Model Used

OpenAI `gpt-6.1-sol` through Codex, with reasoning, code editing, shell
execution, and automated tests. The context-window size is not exposed
in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-02 15:02:00 -06:00
Devin FoleyandPaperclip 49b3804830 fix(connections): load permissions and show AI account identity (#18653)
## Thinking Path

> - Paperclip manages AI agents and their access to saved connections.
> - The Permissions page loads account details and permitted agent
choices.
> - Company-wide AI accounts repeat retained installation checks for
every candidate agent.
> - This makes target checks grow with the square of the roster size.
> - The browser waits without a deadline, and connection names do not
identify the provider login.
> - This pull request batches direct AI checks and bounds loading with
recovery controls.
> - Account details load separately and show a provider email or an
explicit profile-permission limit.

## Linked Issues or Issue Description

**What happened?**

Opening a saved AI account can leave Permissions on “Loading AI
account…” for minutes. The account itself can be connected. The existing
capability batch excludes AI connections, so a company-wide install
repeats checks for every installed agent for every candidate. Saved
names and Paperclip ownership also do not establish which provider login
a credential uses.

**Expected behavior**

Direct AI accounts reuse retained-target checks within one descriptive
request. The page shows loaded account controls or a bounded failure
with Retry. Permissions shows the provider email and organization when
the selected credential permits profile access. An unavailable profile
must not block maintenance or disconnect a working inference credential.
Writes still authorize current permissions.

**Steps to reproduce**

1. Save an AI account in a company with several agents.
2. Install the account company-wide.
3. Open its Permissions page.
4. Delay the account-list or grants response to exercise the loading
failure.

The maintained benchmark reproduces database work with synthetic local
data. Refs #17945, which added batching for non-AI connections. Searches
found no open PR for this AI-account loading fix.

## What Changed

- Include direct AI accounts in the existing board capability batch.
Referenced pool members, delegated actors, complex selectors, and
mutation authorization keep their existing evaluator.
- Add opt-in per-caller GET deadlines to the API client. A timed-out
caller detaches the stuck coalesced request so Retry starts a fresh
fetch. Other callers retain their own cancellation and results.
- Apply a 15-second deadline to AI account lists and grants reads. The
permissions view retries transient failures once and reports other
failures immediately.
- Share the parent Permissions grants query with AI account details.
Keep loaded controls visible after a background error and offer Retry.
- Add a grant-scoped identity GET and OpenAPI contract. The service
checks current membership and credential audience before it reads the
selected credential. It projects only the provider email and
organization; provider IDs, tokens, and raw errors stay private.
- Show account details independently of maintenance controls. Anthropic
profile denial has an explicit message and preserves connected status.
Transient profile failures have a separate Retry action. Observations
are cached for five minutes under the company, connection, grant, and
grant revision.
- Extend real PostgreSQL and authenticated HTTP coverage,
client/component regressions, map guidance, and the existing benchmark's
AI mode.
- Address the Apex file-size finding by moving gallery identity lookup
into the existing app display helper module. `AppDetail.tsx` is 984
lines; lookup behavior is unchanged.

## Verification

Local source checkout on macOS, Node 25.6.1, pnpm 9.15.4, and disposable
PostgreSQL 18.1. Provider calls use fixtures. No hosted deployment or
provider qualification is claimed.

- Passed `pnpm -r typecheck` and `pnpm build`.
- Passed all 87 tests in `connection-management.integration.test.ts` and
all 33 tests in `connection-install-capabilities.test.ts`.
- Passed 196 AI connection, identity-provider, and OpenAPI tests:
`ai-connections.test.ts`, `ai-account-identity.test.ts`, and
`openapi-routes.test.ts`.
- Passed 107 focused UI/client tests: `client.test.ts`,
`ManagedAiConnectionDetails.test.tsx`,
`AiConnectionAccountDetails.test.tsx`, and `AppDetail.test.tsx`.
- After the Apex extraction, passed UI typecheck/build and 106 component
tests across `AppDetail.test.tsx`, `AppNotConnected.test.tsx`,
`ManagedAiConnectionDetails.test.tsx`, and
`AiConnectionAccountDetails.test.tsx`.
- The authenticated HTTP tests compare complete grants responses across
human roles, for tool and AI connections. They verify a real install
mutation succeeds before revocation and fails afterward.
- A company-wide personal AI fixture checks 20 targets instead of 400.
Pool-member permission loss still denies the complete pool description.
- UI states covered: shared cached grants, stuck account/grants fetches,
one automatic retry, terminal failure, manual recovery, authorization
failure, background failure with retained controls, and unmount
cancellation. Client tests also cover stalled response bodies and
independent coalesced callers.
- Identity coverage includes actual bearer-key/JWT reads, private-user
and cross-company denial before provider access, revoked credentials,
provider 401/403/429/500, and grant-change isolation. A real local HTTP
fixture stalls the response body, verifies the shared 15-second
deadline, and keeps unrelated HTTP requests responsive. The test
shortens the native deadline to 100 ms. Profile permission denial leaves
the saved account connected.
- Passed `pnpm check:token-gates`, `node scripts/check-maps.mjs`, `node
scripts/check-module-boundaries.mjs`, and `git diff --check`.
- The full local `pnpm test:run` started with the loading-only change.
All six chat shards passed. It recorded one failure in the unchanged
`heartbeat-retry-scheduling.test.ts` quota-rejection case. That exact
case passed a focused rerun on the final head. The initial failure cause
remains unconfirmed and its local log is retained; this is not a full
local-suite pass. The redundant local run was stopped with SIGINT after
final-head CI completed successfully.
- [Final-head
CI](https://github.com/paperclipai/paperclip/actions/runs/41515556725)
passed on `ead8d276d4a2023614fff54b3e9a858f28c3178b`: typecheck, build,
all 12 server shards, all 3 chat shards, workspace suites, all 9
serialized suites, all 8 end-to-end shards, Runner checks, and the
aggregate verify gate. Security checks passed. Optional Storybook checks
were skipped by workflow policy. GitHub reports the branch mergeable
without conflicts.
- Apex reviewed head `ead8d276d4a2023614fff54b3e9a858f28c3178b` at 5/5,
confirmed the extraction resolves its earlier file-size finding, and has
no unresolved review threads.

The existing benchmark ran for the loading-only change now recorded in
commit `5f725b36fa52002545241a5a8b7a10602f0cc0ce`, with `--purpose=ai
--baseline-ref=026fd9e3452`. The identity follow-up leaves that batch
source unchanged. Two warmups and five alternating samples exercise each
of eight fixture shapes. Complete positional capabilities, reasons, and
operations match the baseline in every sample.

| AI fixture | SQL calls before → after | Target reads before → after |
| --- | ---: | ---: |
| 1 agent, company install | 9 → 9 | 1 → 1 |
| 32 agents, company install | 5,248 → 164 | 1,024 → 32 |
| 100 agents, company install | 50,400 → 504 | 10,000 → 100 |
| 100 agents, partial install | 13,175 → 503 | 2,575 → 100 |

These counts measure the real service over local PostgreSQL. They do not
predict hosted page latency. To reproduce the standalone benchmark, use
a checkout of commit `5f725b36fa52002545241a5a8b7a10602f0cc0ce` and run
the command below. Its isolation check intentionally rejects the later
identity follow-up's additional runtime changes.

```sh
node --import ./server/node_modules/tsx/dist/esm/index.mjs scripts/benchmark-connection-install-capabilities.ts --purpose=ai --baseline-ref=026fd9e3452
```

Run the final-head regression suites from the repository root:

```sh
cd server
pnpm exec vitest run src/__tests__/connection-management.integration.test.ts src/__tests__/connection-install-capabilities.test.ts src/__tests__/ai-connections.test.ts src/services/ai-account-identity.test.ts src/__tests__/openapi-routes.test.ts
cd ../ui
pnpm exec vitest run src/api/client.test.ts src/components/ai-connections/ManagedAiConnectionDetails.test.tsx src/components/ai-connections/AiConnectionAccountDetails.test.tsx src/pages/apps/AppDetail.test.tsx
```

## Risks

Descriptive permissions reuse retained facts within one request. A
concurrent change can leave a displayed choice stale; the next request
and every write still authorize fresh. Pools with referenced members
retain their existing cost.

The account and grants clients now bound each caller's wait. A browser
abort does not cancel an authorization read already admitted by the
server. The independent profile request uses a fixed Anthropic origin, a
bounded body, no redirects, and a 15-second deadline. Inference-only
credentials can return no email; that is reported without guessing from
a Paperclip owner or changing connection health. Profiles are fetched
only for the caller's authorized selected grant. No ambient CLI
identity, persistent identity cache, background polling, or
billing-identity change is added. Other API reads keep their existing
behavior. No migration is required. Staging has not been redeployed.

## Model Used

OpenAI `gpt-6.1-sol` through the Codex harness in T3 Code, with xhigh
reasoning, code editing, execution, and test tools. The host does not
expose the context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change and contains no internal
Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-02 12:29:03 -08:00
DottaandPaperclip 53f480d1b3 fix(native): preserve warm continuity and deferred review replies (#18631)
## Thinking Path

> - Paperclip manages AI agents and their saved work.
> - Product E2E tests must check saved personal files across separate
turns.
> - The server records file collection in the durable `instruction_save`
run-log event.
> - The warm test read optional terminal result metadata instead and
rejected a recorded successful save.
> - This pull request reads the complete event stream for the current
run and uses its latest save receipt.
> - The prompt now specifies the exact nine bytes required by the
temporary-file transfer count.
> - Human review actions select the actual interaction card, which can
share its interaction ID with a navigation button.
> - A later real three-turn run exposed a missing reply after workspace
finalization moved to its durable recovery owner.
> - Reply recovery handled completed tasks but omitted ordinary tasks
that awaited review.
> - This pull request also publishes their recorded final reply once
while preserving the pending review.

## Linked Issues or Issue Description

**What happened?**

The [retained live continuity
attempt](https://github.com/paperclipai/paperclip/actions/runs/41477302876/job/125420001074)
saved the correct memory file and unchanged 8 MiB binary. Its durable
run log contained a successful `instruction_save` receipt. The oracle
read `resultJson.instructionSave`, which was absent, and failed before
turn two. The temporary file also had a trailing LF. Its prompt allowed
that result, while the byte-count check required nine bytes.

**Expected behavior**

The oracle must use the documented authoritative save event. A missing
receipt, a later failed save, incorrect transfer counts, or another
run's events must fail. The prompt must specify the bytes that its
independent check requires.

**Steps to reproduce**

1. Run `daytona-warm-continuity.runner-codex.daytona.warm-three-turn`
with the configured protected credentials and immutable image.
2. Complete a native turn whose terminal result has no `instructionSave`
field.
3. Compare the oracle output with the same run's successful
`instruction_save` event.

A subsequent [three-turn
attempt](https://github.com/paperclipai/paperclip/actions/runs/41495337334/job/125451304553)
passed every personal-file assertion and reused the same warm process.
Its first final reply was recorded as a completed agent-message event
but was absent from comments. The log shows
`native_workspace_finalization_busy`; the durable recovery path excluded
`needs_review` replies. The final message matcher correctly failed. This
failure remains recorded.

The observed application revision was
`aab87ce70744660a4a21c77278b0ede267c04720`. Related work: #14695 and
#18494. The retained failed result keeps its original grade and
definition.

## What Changed

- Read all run-event pages through the existing bounded collector.
- Require events to belong to the requested run and select the latest
`instruction_save` event.
- Retain strict byte counts and reject missing, failed, pending or
superseded receipts.
- Specify nine ASCII bytes and no trailing newline for the temporary
file.
- Scope human review actions to the interaction card and its exact
interaction ID.
- Advance the warm suite definition to version 5 and document its
evidence source.
- Recover recorded final replies for ordinary native tasks with an
accepted `needs_review` result and terminal state.
- Preserve pending reviews, existing reply selection,
company/turn/digest checks and external governed-response authorization.
- Update the task feature and agent access maps.

## Verification

- Real PostgreSQL regression: deferred review reply discovery failed
before the production repair (expected one candidate; found zero). The
final-message event and pending review were present.
- Recovery cases cover one publication, no repeated provider run,
unchanged review, and rejection of absent/wrong-turn final messages, bad
digest and suppressed comments.

- Red: seven new boundary regressions failed against the old receipt
lookup.
- Green: 169 focused oracle, event pagination and catalog checks passed.
Product E2E typecheck passed after rebuilding local package
declarations.
- Retained-evidence replay confirms that the new lookup finds the real
successful save event. The original attempt remains failed because its
temporary file included an LF.
- Recursive typecheck passed before the final recovery change; server
typecheck passed afterward. The recovery and control-plane suites passed
all 112 tests. Full build and map checks passed.
- The broad local test run reached one unrelated 30-second timeout in
`attention-retention-work.test.ts` (maintained-review/confirmation
batching). The same unchanged case then passed on one targeted retry
(39.9 seconds including module load). The original failure remains
retained. The broad run also reported one unchanged workspace-conflict
case, which passed on its targeted retry (14.85 seconds including module
load). Both original failures remain retained. The redundant broad local
run was stopped after current-head CI completed all required gates: 55
successful checks and 3 selection skips. No all-green local broad-run
claim is made.
- The separate artifact-transfer cell already passed on the recorded
application revision: independent source and delivered bytes matched at
407,485 bytes, with a completed task, succeeded native run and cleared
execution locks. This does not establish a three-turn continuity pass.

- [Real native three-turn
acceptance](https://github.com/paperclipai/paperclip/actions/runs/41499102994/job/125465795210)
**passed** at `3b207a42943e9eeb371d4f2d5623de72093eb6d5`, suite
definition 5. Turn one exercised `committed_task_response_recovered`.
All three completed final replies were persisted once and in order. All
three strict personal-file receipts passed. The unchanged 8 MiB binary
survived; later transfers copied only 36 and 54 bytes. The lease was
created, resumed, and resumed with the same runner PID/start time,
runner instance, native session and provider session. Final task was
`done`, all three runs succeeded, and checkout/execution locks were
null.
- The aggregate startup summary has no separate provider-process PID
proof. The raw run records independently prove the stable runner process
and provider session stated above. This single native cell does not
qualify the legacy cell or a full provider matrix.
- The passing campaign reused the signed immutable runner image. It
required no disk expansion. Earlier campaign image builds used the
recorded temporary 120 GiB mitigation; default 60 GiB build capacity
remains unqualified. All scoped completed probes were removed and
independently returned 404; org CPU/disk usage returned to zero. This
does not resolve unknown historical resources under a different
credential identity.
- Current-head Greptile is 5/5; review-thread pagination is complete
with zero threads. All 55 current-head checks are successful; 3
selection checks are skipped. The paid campaign, result enforcement and
report publication all completed successfully.

## Risks

- Publishing a reply must not approve the work. Recovery only copies the
accepted turn’s completed final message. It preserves the pending review
and does not start an executor.
- Conversation and external governed-response paths retain their
existing separate authorization.

The latest save event can record failure after an earlier success. The
oracle rejects that case. Event pagination, missing receipts and
cross-run evidence also fail closed. The exact temporary-file byte count
remains required. The review selector still requires the intended
interaction ID and enabled action on its actual card. The production
change is limited to ordinary internal-task reply recovery. It still
requires an accepted result, a matching successful terminal disposition,
the completed final message, and existing publication authority.

## Model Used

OpenAI Codex, based on GPT-6, with shell and code tools. The exact
deployment variant and context-window size are not exposed in this
session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` /
`Closes: #` / `Refs: #` OR (b) described the issue in-PR following the
relevant issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change and contains no internal
Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-02 14:19:48 -06:00
DottaandPaperclip 946735d03a Persist task sorting in URLs and show newest routine tasks first
Save task sort choices in URLs across task views. Open routine tasks by creation time, newest first, with stable sorting before pagination.

Co-Authored-By: Paperclip <Paperclip-Paperclip@users.noreply.github.com>
2026-11-02 13:32:40 -06:00
DottaandPaperclip 5a07c30c1a fix(workspaces): reduce temporary disk use during remote capture (#18644)
## Thinking Path

> - Paperclip manages AI agents and preserves their completed work.
> - Native remote finalization must save workspace files before it
releases the writer.
> - Portable capture copied the working tree and Git history, repacked
the history, and then wrote an archive.
> - These temporary copies can exhaust a small sandbox after normal
development work.
> - A completed provider turn then fails finalization and file
preservation repeats the same failure.
> - This change streams checked working files and keeps only an
independent Git copy in scratch.
> - The save still rejects changed sources and incomplete output.

## Linked Issues or Issue Description

Related: #18403 added portable remote workspace storage. #18172 handles
disk pressure in Daytona directory transfer. This failure occurs
earlier, while the portable archive helper creates its source archive.
That earlier repair does not cover this path.

**What happened?**
A completed native run failed workspace finalization three times. Its
file-preservation retries also failed. In a retained 10 GB Linux sandbox
with about 1.5 GB free, the deployed helper failed during `git repack -a
-d` with `Out of diskspace`. The working files used about 603 MB, and
Git used about 444 MiB.

**Expected behavior**
Capture a coherent workspace when free space can hold one full archive
plus an independent Git copy. Preserve working files, staged changes,
unpushed commits, and existing recovery gates.

**Steps to reproduce**
1. Use a disposable Linux sandbox with a Git repository and generated
working files.
2. Leave enough free space for an archive and a Git copy, but not a
second working tree and another repack.
3. Run the portable capture helper. The old helper fails while creating
temporary data.
4. Run the fixed helper against the same source and free-space limit.
Verify each archived file hash.

The small regression uses real file serialization and a controlled
filesystem capacity failure at archive creation. It failed with `ENOSPC`
before the production edit and passes afterward.

**Paperclip version or commit**
The observed staging server served
`42c64d4ec4b9b0898556fcdf6ba304c4285a7819`. The repair is based on
`a92f616cd0`.

**Deployment mode**
Hosted staging. Linux x64, Node 25.9.0, Daytona sandbox. Local tests use
a macOS source checkout.

## What Changed

- Stream working files from checked file handles. Keep only normalized
Git metadata in scratch.
- Remove the second repack after a mirror clone that already uses
`--dissociate` and `--no-hardlinks`.
- Check each streamed file's hash, size, mode, and filesystem identity.
Recheck the source inventory and Git state before returning a receipt.
- Remove incomplete archives after failure or cancellation. Keep
pre-existing archive files intact.
- Add space-limit, concurrent-change, cancellation, and existing-file
safety cases. Update execution semantics and workspace verification
recipes.

## Verification

- Red before the production change: the capacity regression failed with
`ENOSPC`. Green afterward: 54 archive and transport tests pass.
- The existing tests restore ordinary, linked, and borrowed Git
repositories after their sources disappear. They retain staged,
unstaged, and unpushed work. Credential and path guards also pass.
- Live comparison on the same retained sandbox: the deployed helper
failed after 19.4 seconds with Git disk exhaustion. The fixed helper
completed in 35.3 seconds. It produced a 1,081,872,803-byte archive with
24,111 entries. An independent reader checked every archived file hash
and the manifest digest. The source commit stayed unchanged. Diagnostic
scratch was removed.
- This live probe exercised the changed capture boundary. It did not
deploy a server, upload a production snapshot, finalize the failed run,
or replay its provider turn. Full task recovery still needs rollout and
the normal export recovery path.
- `node scripts/check-maps.mjs` and `git diff --check` pass.
- Current-head CI passes: [PR
workflow](https://github.com/paperclipai/paperclip/actions/runs/41499985180),
commit `d42700f7f4b0bef14a5969a44c2da0b2513e0ed2`. Greptile rates the
same head 5/5 with no actionable findings or unresolved threads.
- The independent Ponytail advisory also rates this exact head 5/5 with
no findings. Its structured check remains queued because the automatic
request was bound to the earlier head. A [fresh current-head review
request](https://github.com/paperclipai/paperclip/pull/18644#issuecomment-6585296011)
was accepted and queued. Its predecessor has a successful workspace
export but remains active in finalization, so the new review cannot
start yet. This review-service publication gate must complete before
claiming every check is green.
- `pnpm -r typecheck` and `pnpm build` pass. The final server-only
typecheck also passes after the test additions.
- Supported-runtime verification on Node 24.11.0: all 54
archive/transport tests and all 46 existing workspace lifecycle tests
pass. The lifecycle suite uses a disposable real Postgres database and
local filesystem transport with encrypted snapshot storage. It checks
save/restore after losing the original allocation, ownership, retention,
and file continuity. This is separate from the live Daytona capture
probe.
- The first extra lifecycle attempt could not start its local Postgres
binary because the installed Darwin package lacked library aliases.
Local dependency setup was repaired before the passing run. No
production or repository code changed for that setup.
- The full local `pnpm test:run` on the host default Node 26.4.0 stops
in chat-test collection with `No test found ... in lines ...`; it has no
suite verdict. A clean retry repeats the failure. The unchanged
`a92f616cd0` test wrapper reproduces it with the same installed
dependencies, after correcting an initial baseline setup that lacked
built package entries. This is a local test-runner limitation, not a
full local pass. Current-head CI remains the full-suite gate.
- One focused run timed out while deeply comparing 4 MB buffers under
concurrent build load. Complete SHA-256 comparisons retain the content
check without that assertion cost. The capacity case then passes in
under one second, and the final 54-test run passes. The disk allowance
and production code did not change.

## Risks

- Streaming reads the live source instead of a copied working tree. File
identity, content hashes, mode checks, the final inventory read, and Git
signatures must reject concurrent changes. Regression tests exercise
these checks.
- Capture still needs space for the full archive and normalized Git
metadata together. It cannot export from a completely full disk.
- Archive framing and restore validation stay compatible. The change has
no database migration or new execution authority.
- The incident remains unrecovered until the fixed server performs
normal workspace finalization. No deployment or merge is included in
this PR.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, repository inspection, code
editing, shell tools, browser diagnostics, and automated tests. The
exact serving variant and context-window size are not exposed in this
session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-02 13:22:23 -06:00
DottaandPaperclip 5f0bb518b0 fix(runner): handle blank assigned-tool schema references (#18637)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Native agents discover assigned app tools through a governed
gateway.
> - OpenCode receives search and call tools instead of the full app
catalog.
> - A blank optional schema reference selected schema lookup instead of
search.
> - Agents received an unknown-tool error and could abandon valid app
access.
> - This pull request treats blank references as search and explains
invalid schema requests.
> - Agents can find their assigned tools while the gateway keeps its
access checks.

## Linked Issues or Issue Description

**What happened?**

An agent called `paperclip_search_assigned_tools` with
`{"query":"github","schemaTool":""}`. The server tried to find a tool
with an empty name. It returned `assigned_mcp_tool_unknown` instead of
search results. The agent then reported that its GitHub tools were
missing.

**Expected behavior**

A blank optional schema reference must permit normal tool discovery. A
bad schema reference must explain how to search again.

**Steps to reproduce**

1. Assign an app tool to a native agent that uses on-demand discovery.
2. Search with `{"query":"github","schemaTool":""}`.
3. Observe the unknown-tool error instead of the assigned tool.

**Paperclip version or commit**

Reproduced from source before this fix, on master at d26628e35a.

**Deployment mode**

Native OpenCode with assigned MCP tools. The shared search code also
serves other native providers.

Related implementation: Refs #17740. A search for `schemaTool` found no
duplicate issue or pull request.

## What Changed

- Treat empty and whitespace-only schema references as normal search.
Accept a zero schema offset in this mode.
- Explain how to correct unknown references and positive offsets without
a reference.
- Test discovery, invocation, and revocation through the authenticated
OpenCode MCP bridge.
- Update tool descriptions, developer guidance, and the execution maps.

## Verification

- The three new regression cases failed before the fix.
- `pnpm exec vitest run
server/src/services/native-runtime/assigned-mcp-tools.test.ts`: 43 tests
passed after the fix.
- Existing tests cover schema chunks, work-mode restrictions,
revocation, approvals, and pinned tool catalogs.
- `node scripts/check-maps.mjs`: passed.
- `pnpm build`: passed.
- `pnpm -r typecheck`: passed.
- Full CI passed on commit `26d20fc19d846d46d7656a9f0160db5e81479dbc`:
55 successful checks, one neutral review check, and three skipped
checks. Nothing is pending or failing. This includes all CI test shards,
Runner verification, build, typecheck, security checks, and the canary
dry run.
- The duplicate local `pnpm test:run` completed its first five chat
integration shards without failures. I stopped the remaining local run
after the complete CI suite passed. The full local suite did not finish;
the complete-suite result is from CI.
- Greptile and the Paperclip code review each gave commit
`26d20fc19d846d46d7656a9f0160db5e81479dbc` a 5/5 score with no findings.
There are no unresolved review threads.
- The initial focused test could not collect tests until the fresh
worktree built its plugin SDK dependencies. `pnpm --filter
@paperclipai/plugin-sdk ensure-build-deps` resolved that setup
requirement.

## Risks

Low risk. Blank references and zero schema offsets now select normal
search. Nonblank references still require an exact authorized tool name.
Discovery and calls keep their existing gateway checks. The change needs
no database migration.

## Model Used

OpenAI Codex, based on GPT-6, with reasoning, tool use, and code
execution. The host does not expose the exact backend model ID or
context window size in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-02 12:07:28 -06:00
DottaandPaperclip 0710c56842 fix: retry saved chat input after a successful run (#18621)
## Thinking Path

> - Paperclip manages AI agents and the work they receive.
> - Connected conversations save incoming requests before they can run.
> - A request can remain queued when the previous turn finishes
successfully.
> - Task Retry sent that case through the failed-run retry guard, which
rejected the successful run.
> - This change resumes the saved request through its existing admission
owner.
> - The operator can continue saved work while preserving the prior
result and current permissions.

## Linked Issues or Issue Description

**What happened?**

Task Retry returned a conflict for a restricted connected conversation
when its latest run succeeded and newer input remained saved. A GitHub
review can reach this state when a new PR head arrives during the
previous review. The prior review cannot publish against the new head,
but its completed turn is not a failed run that can be replayed.

**Expected behavior**

Retry should resume the saved request with its original source identity
and current authorization. It must preserve the previous successful
result and must not replay that turn.

**Steps to reproduce**

1. Start a review through a restricted GitHub endpoint.
2. Send a PR synchronize event while that review runs and retain its
deferred input receipt.
3. Let the original run finish successfully with the task still open.
4. Click Retry. Before this change, the failed-run guard rejects the
request. With this change, the saved input creates one successor through
normal admission.

Related work: #17725, #16965, #15033.

## What Changed

- Select the newest saved input by its canonical chat action and wake
receipt.
- Store its receipt ID in the task retry intent and resume it through
the existing chat owner.
- Preserve caller permissions, source authorization, task state, agent
state, cleanup waits, and duplicate-click handling.
- Exclude saved-input intents from generic board-message replay. Keep
board messages in separate queued receipts and allow independently saved
input after successful board turns.
- Add signed webhook, HTTP endpoint, accepted-result preservation, and
refusal tests. Update execution semantics and capability maps. Stabilize
the existing Teams lifecycle test with explicit database result
ordering.

## Verification

- Current-head [CI
passes](https://github.com/paperclipai/paperclip/actions/runs/41482727909):
54 successful checks, one neutral review, three expected skips, and a
successful Snyk status. Greptile gives commit `53f02e9105` 5/5 with no
unresolved review threads.
- Reproduced the original HTTP 409 before the fix. Reproduced both
review findings with three failing cases before fixing them.
- Passed 25 focused and related GitHub retry cases, 52 ordinary queue
tests, and three native startup cases against disposable PostgreSQL.
Earlier related verification also passed 83 GitHub retry cases and 109
recovery/receipt cases.
- Passed `pnpm -r typecheck`, `pnpm build`, `node
scripts/check-maps.mjs`, and the module boundary check. The final server
typecheck passed after the review fixes.
- The full local `pnpm test:run` attempt stopped on an existing Slack
queue deadline assertion with a 1 ms database/host clock difference.
That case passed in isolation. A second attempt was stopped when review
changes superseded its source. Full local completion is not claimed; all
chat, server, browser, build, and runner CI jobs passed on the final
commit.
- The runner CI job needed one rerun after a two-second startup timing
assertion failed. That case and its two related cases passed locally;
the rerun passed without code changes.
- Live GitHub review publication with this patch is not verified. The
signed provider fixture uses mocked GitHub responses. This branch is not
deployed.

## Risks

- This changes how Retry dispatches deferred external input after a
successful run. It relies on the existing inbound owner to recheck
source authority before execution.
- Tests cover paused connections and agents, changed source bindings,
completed tasks, pending cleanup, duplicate clicks, and preservation of
the accepted result.
- No schema migration or public API shape change is required.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, code execution, and browser
tools. The exact deployed model ID and context-window size are not
exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-02 11:46:46 -06:00
DottaandPaperclip 40b8075916 feat(ui): show scheduled task waits as Monitoring (#18624)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Task indicators tell an operator whether work is active, waiting, or
complete.
> - An agent can yield until a saved monitor checks CI or another
external result.
> - The task currently keeps the In Progress icon between those runs.
> - Changing the stored status would affect monitor admission and
recovery.
> - This pull request adds a read-only Monitoring display state with a
blue clock.
> - Operators can see and filter scheduled waits while execution keeps
its existing rules.

## Linked Issues or Issue Description

**What existing behavior does this improve?**

Task status indicators, task collection filters, board columns, and
search facets.

**Current behavior**

A task that waits for a scheduled monitor shows the same In Progress
icon as active work.

**Proposed behavior**

Show Monitoring with a static blue clock when an agent-owned task has a
saved ordinary monitor and no active run, execution lock, review
participant, or active recovery action. Return to the normal task
indicator when the check starts. Preserve review, blocked, terminal, and
quota-recovery states.

**Reason and benefit**

Operators can distinguish scheduled waits from current agent work
without reading the task history.

**Breaking changes**

None to stored task statuses or execution rules. Task reads gain
optional displayStatus. Collections and search gain a separate read
filter. Existing status filters keep their lifecycle meaning.

Related historical work: #4396 covered a monitoring label exemption.
This change uses the saved monitor and a read projection.

## What Changed

- Add one SQL projection for task detail, compact lists, summaries,
relations, search results, and display-status counts.
- Show the blue clock in shared task icons and chips, task detail and
breadcrumbs, properties, references, list rows, recent navigation, and
agent task cards.
- Add Monitoring to task filtering, grouping, sorting, board columns,
and search facets. Prevent a drag from creating this derived state.
- Keep stored lifecycle statuses, monitor scheduling, checkout,
recovery, permissions, and agent status filters unchanged.
- Add database and UI regression coverage, full-page Storybook examples,
and product and access-map documentation.

## Verification

- Passed `pnpm -r typecheck`.
- Passed `pnpm build`.
- Passed `pnpm check:token-gates` and the map/catalog structural checks.
- Ran the new database suite on a disposable PostgreSQL 17 database. It
covers read surfaces, filter pagination/counts, queued/running checks,
rescheduling, completion, retained monitors, review, and recovery holds.
- Ran existing search, list, board, sidebar, task status, and filter
tests. Corrected board queries use displayStatus and eight columns.
- The full local `pnpm test:run` stopped in a chat integration shard: 12
failures (four timeouts and eight FIFO publication assertions). That run
spanned a rebase. A focused rerun on the current source passed all 21
selected cases without assertion or timeout changes. The original cause
is not established; this does not claim the full local suite passed.
Final-head required CI passed (ci / verify and ci / e2e, run
41488267209).
- Passed 82 tests for task API summaries, recovery precedence, search,
and optimistic updates; 54 tests for status cards, database reads, and
board moves; and 27 tests for blocker relations and recent-task cache
updates. One intermediate database setup hit its 20-second hook timeout;
the serial rerun passed.
- Greptile is 5/5 on d003ea672d. All
review threads are resolved. The separate optional Paperclip Review
ended early and returned neutral; GitHub rejected a direct rerun request
with HTTP 404. It is not counted as a completed review.
- Review fixes cover escalated recovery, is:open, optimistic status
changes, blocker-summary projection, and recent-task dedupe.
- Reviewed 15 screenshots from production pages and components with
isolated Storybook API fixtures: task detail/properties/breadcrumb,
list, groups, status filter, board, search/results/filter counts,
reference pills, sibling navigation, agent cards, picker, dashboard,
inbox, profile, watched status-card tasks, light theme, and mobile. This
does not claim deployed staging verification.

## Risks

- Read projections must stay consistent across full, compact, summary,
and search responses. Tests cover those paths.
- Monitoring is not a writable lifecycle status. The board does not
accept drops into its Monitoring lane or onto a monitored card. This
prevents a drag from implying a scheduled check. Move work into In
Progress through that lane instead.
- The read projection adds run/recovery existence checks. Existing
heartbeat_runs_company_issue_created_idx and
issue_recovery_actions_company_source_status_idx indexes cover the
company/task lookup. It adds no worker, timer, recurring query,
migration, or provider call. No production load benchmark is claimed.
- Older clients can ignore displayStatus. Existing lifecycle status
filters keep their behavior.

## Model Used

OpenAI Codex, GPT-6, with reasoning, repository tools, code execution,
and browser tools. The exact backend model identifier and context-window
size are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-02 11:35:30 -06:00
DottaandPaperclip 0748b90062 fix(server): stop goal-less native runs before board task closure (#18616)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - A task owns its active run and its tool access.
> - A board user can close a task while that run is still working.
> - The task update route stopped native runs only when they had an
active session goal.
> - Providers without goals kept running after the route cleared task
ownership.
> - This pull request stops those native runs before a board closure
releases ownership.
> - The benefit is an orderly stop instead of tool denials and failed
finalization.

## Linked Issues or Issue Description

**What happened?**

A board user marked a task Done while its native OpenCode run was
active. The route cleared its execution lock without stopping the
provider. Later tool calls failed with
`paperclip_runner_tool_binding_not_authorized`. The final wake fence
then failed with `native_current_wake_comments_binding_changed`, leaving
workspace finalization in retry. Cancelled also released ownership
before its later Stop call.

**Expected behavior**

A board closure must confirm native Stop before it releases task
ownership. A failed Stop must leave the task open. The provider does not
need to support session goals.

**Steps to reproduce**

1. Start a native task with a provider that has no active session goal.
2. Mark the task Done while its run is active.
3. Observe that the old route updates the task without cancelling the
run.

## What Changed

- Reuse the existing audited cancellation path before a board user marks
an active native task Done or Cancelled.
- Keep the existing 409 response when Stop is unconfirmed.
- Record the board user in the Stop metadata. The existing
acknowledged-Stop policy then leaves queued input and recovery quiet
until a later explicit wake.
- Inspect additional runs only when a task has an execution owner; tasks
without a run lock keep their existing completion path.
- Keep native semantic completion, legacy completion, and goal control
behavior.
- Add route regressions for stop ordering, failed Stop, and legacy
completion.
- Update the execution contract and task maps.

## Verification

- Red before the fix: three regressions failed. Done had no Stop;
Cancelled stopped after the update; an unconfirmed Stop allowed Done.
- A second red proved that a Stop receipt without the route's operator
metadata was not recognized by the real recovery policy. Both cases pass
after the metadata repair.
- Final local result on macOS arm64 / Node.js 26.4.0: **348 tests pass
across eight suites**. These cover the route, native self-completion
authority, cancellation, acknowledged Stop, recovery queues, dependency
wakeups, and completion telemetry.
- CI found seven sibling route failures from an unnecessary active-run
lookup on tasks without execution ownership. Those cases failed locally
before the correction and pass afterward.
- Earlier concurrent local runs hit a module-load hook timeout and one
watchdog socket hang-up. The isolated watchdog case and the complete
final eight-suite run pass with a 90-second startup budget. No assertion
was removed.
- `node scripts/check-maps.mjs` and `git diff --check`: pass.
- `pnpm build` and `pnpm -r typecheck`: pass. Server build and typecheck
also pass after the Stop metadata change; the final server build
includes the lookup correction.
- `pnpm test:run`: attempted; the unchanged chat shard selector failed
before executing its selected tests (`No test found ... in lines ...`).
This is separate from the PostgreSQL startup failure. CI supplies
full-suite verification.
- PostgreSQL integration and live-provider acceptance did not run
locally. Embedded PostgreSQL failed before app startup with `could not
create semaphores: No space left on device`. No usable isolated local
database runtime was available. CI supplies the PostgreSQL regression
environment. The full live OpenRouter workflow remains unverified.
- The first final-head CI pass hit a 15-second timeout in the unchanged
`attention-retention-work.test.ts` blocker-history fixture. Cleanup then
deadlocked and later inserts reused IDs. This service test does not call
the changed route. The original log is [retained
here](https://github.com/paperclipai/paperclip/actions/runs/41476191754/job/125384289220).
The one allowed rerun also failed on the same commit: the `running` case
exceeded 15 seconds again ([rerun
log](https://github.com/paperclipai/paperclip/actions/runs/41476191754/job/125393915025)).
The rerun otherwise passed 2,346 tests. No retention source or assertion
was changed. This repeatable failure is the remaining CI gate; the PR is
**not ready to merge**. The next step is to isolate that retention
fixture/query in a usable PostgreSQL environment and repair its cause
before rerunning CI.
- Greptile reviewed final commit
`b3cb41af2d911e9ced219e846cada3ecec835dbf` at **5/5**, with no
unresolved review threads. Greptile is green. CI is blocked by the
repeated retention test timeout described above.
- CI native cancellation evidence: all 16 tests in
`server/src/__tests__/native-cancellation-request.integration.test.ts`
pass ([job
log](https://github.com/paperclipai/paperclip/actions/runs/41476191754/job/125384289222)).
- CI PostgreSQL wake-queue evidence: all 96 tests in
`server/src/modules/wake-queue/adapters/postgres.test.ts` pass ([job
log](https://github.com/paperclipai/paperclip/actions/runs/41476191754/job/125384289470)).

## Risks

Board closure now waits for native Stop even when the provider has no
goal. A failed or uncertain Stop keeps the task open. The change uses
the existing cancellation and workspace-preservation path. It adds no
retry loop, credential access, schema change, or publication authority.
Direct service updates and agent semantic completion retain their
existing paths.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, repository tools, shell
execution, and browser inspection. The exact serving snapshot ID and
context window are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-02 10:41:44 -06:00
Nicky LeachandPaperclip aab87ce707 Prove workspace delivery before inspecting cleanup candidates (#18493)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Completed tasks leave workspaces that need safe cleanup.
> - Providers without ancestry inspection currently need a recorded
merged PR before cleanup can start.
> - A squash merge changes commit identity, so direct ancestry cannot
prove that delivery.
> - This change proves delivery from the finalized HEAD and captured
destination before storage inspection.
> - Fresh storage checks and a second delivery check still protect
removal.
> - This reuses the existing worker and receipts. It adds no table or
timer.

## Linked Issues or Issue Description

Refs #18410. Related: #13400 addresses workspace identity during
inspection; this change adds destination-aware delivery discovery.

## What Changed

- Resolve direct ancestry or discover an associated merged GitHub PR
without a recorded work product. Require exact HEAD, destination
repository and branch, and a reachable integration commit.
- Use the latest settled finalization receipt as a candidate. Reject
missing, failed, pending, conflicting, or changed evidence.
- Inspect storage only after positive remote proof for providers that
disable ancestry inspection. Recheck HEAD, branch, source identity and
delivery before removal intent.
- Add an optional provider capability for a specific PR recovery hint
and an optional prepared destination receipt. Older providers keep their
existing protocol.
- Wake cleanup when finalization writes settle or gain a workspace
binding. Keep remote-only retries for concrete unresolved delivery. Park
missing or unsupported candidate identity.
- Reuse the source project's explicit GitHub consent for delivery checks
through the existing authorization service. Revalidate the bound
repository and consent before removal; missing or revoked consent
retains storage without switching identities. Public sources remain
anonymous.
- Update the contracts, documentation, access map, and targeted
regressions.

## Verification

- Initial-head GitHub CI passed at
`5acd4c818be6f1764f8319f42891f9956c357c26`, including full build and
typecheck. Standard Greptile is 5/5 with no open threads. The first Apex
review scored 3/5 and found startup latency from remote proof lookups
and removal retry identity changes across provider capability changes.
Both corrections are pushed in `9d1a38df3d`, with the qualified
destination-ref length fix. Red regressions reproduced each issue.
Latest targeted checks passed: cleanup/worker 26, provider integration
41, SDK contract 8. Head `9d1a38df3d` passed standard and Apex reviews
at 5/5 with no open threads, plus all CI including full build/typecheck.
Canary Dry Run initially failed on an npm 404 fetching
`rollup-4.67.3.tgz`; the exact tarball subsequently returned HTTP 200,
and one targeted retry passed without source changes. Aggregate
verification also passed. After #18403 merged, master introduced
conflicts in shared workspace cleanup and metadata handling. Resolved
them in `7700832536`, preserving remote snapshot cleanup and Git
delivery-proof cleanup. Targeted merge verification: 93 tests passed in
the first run (59 opt-in skips), then all 16 remote lifecycle tests
passed with explicit database opt-in; map checks passed. The isolated
database is stopped. The merge head received standard review 5/5. Its CI
found two failures in unchanged test cleanup paths: native runtime
temporary-directory ENOTEMPTY and agent-chat cancellation lock timeout.
Those failures remain recorded and require successful final-head
verification. The subsequent project-consent change has targeted
coverage: authorization36, resolver33 and cleanup19 tests passed,
including revoked consent, anonymous public access and source-binding
races. The positive consent test failed before the fix. Current head
`c772679e05` has green GitHub CI, including full build/typecheck and
both previously failing test jobs, plus standard Greptile 5/5 with no
open threads. Neither cleanup failure required changes to its test path.
Apex also completed at 5/5 on this exact head (check `124651548532`,
summary updated 2026-10-31 20:45 UTC), with no open review threads. The
PR remains draft. Earlier failures remain recorded above.

- Final focused run on the rebased branch: **182 tests passed across six
files**, covering the resolver, delivery cleanup, provider bridge,
finalization notifications, existing workspace service and SDK
contracts. The disposable test database was stopped afterward.
- Targeted resolver tests: 33 passed. These cover ancestry, discovered
squash PRs, wrong HEAD/base/repository, removed integration commits,
bounded responses, cancellation and credential isolation.
- Targeted cleanup integration tests: 17 passed. Provider bridge
integration: 36 passed. SDK contract tests: 7 passed. Finalization
notification tests: 9 passed.
- A negative control that removed the final delivery check failed the
race regression as expected. The check was restored.
- Read-only live GitHub probe: the new resolver discovered PR #18410
from HEAD `3f5ade4cd42b707040e9a82fdaed343e3d736a09`, without PR hints.
It proved integration commit `6484f96c28bfb11a793ce4be6cc5ac15643a5a02`
reachable from observed master
`5bc029bf6c1db6647e96acea323f3723fd1d3eba`. GitHub also advertised the
exact original HEAD at `refs/pull/18410/head`.
- `node scripts/check-maps.mjs` passed. Structural checks do not prove
deployment behavior.
- Local tests are targeted by user request. Full build, typecheck and
test suite run in GitHub CI. A standalone server typecheck could not
complete because local Runner build declarations were absent; no
changed-file diagnostics were reported.
- Initial local execution hit a stalled pnpm wrapper, sandbox socket
denial and stale generated SDK declarations. Direct installed binaries,
the authorized isolated test database and rebuilt SDK resolved those
setup failures. No deployment was performed.

## Risks

- Destructive cleanup still requires fresh storage safety and lifecycle
checks. Remote proof alone never authorizes removal. A persisted removal
intent preserves existing recovery semantics.
- Legacy workspaces without an unambiguous destination or completion
HEAD remain retained. This does not guess the original default branch.
- Private repositories use the explicit standing GitHub consent on the
bound source project, with current membership, grant, repository access
and trust checks. No separate company token is required when that
consent is valid. Missing or revoked consent and unavailable or
rate-limited access retain storage; the worker does not borrow a task or
agent identity.
- A known undelivered commit keeps the existing five-minute retry
because external GitHub changes have no guaranteed ingress to this lane.
This can keep cleanup scheduled. Missing evidence parks instead.
- Providers need the new recovery capability to clean a squash merge
whose original HEAD is reachable only through its PR ref. Providers
without it remain conservative.
- The resolver currently supports GitHub.com. Existing local and
other-provider ancestry paths stay in place.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, repository tools and
parallel code agents. The exact runtime model ID and context-window size
were not exposed to this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-02 07:59:17 -08:00
DottaandPaperclip 71a20453e1 fix(workspaces): honor inherited remote workspace bindings (#18611)
## Thinking Path

> - Paperclip manages AI agents and their work.
> - Task creation can bind a child to its parent's execution workspace.
> - Native sandbox runs reserve that workspace before the provider
starts.
> - Remote reservation rejected inherited isolated workspaces and
operator branches because the original source task differed.
> - This check stopped valid child tasks before their existing access
and writer checks could run.
> - This pull request uses the persisted binding and existing
source-access checks to admit that continuation.
> - The benefit is that authorized child tasks can continue saved work
while the single-writer lock stays effective.

## Linked Issues or Issue Description

**What happened?**

A child inherited an active isolated remote workspace through normal
task creation. Its next run failed during setup with `Workspace
ownership changed.` No provider work started. The reservation guard
treated the original `sourceIssueId` as exclusive ownership, although
task creation had persisted a valid child binding.

**Expected behavior**

A bound child or follow-up can reserve the workspace after the prior
writer saves. Current task/run access, source visibility, trust, company
scope, closed-workspace state, and writer checks must still apply. The
original source task remains provenance.

**Steps to reproduce**

1. Create a task with an active saved remote isolated workspace or
operator branch.
2. Create a child without an explicit workspace override.
3. Confirm that the child inherited the execution workspace ID.
4. Start its native sandbox run. The old reservation guard rejects it
before provider execution.

**Paperclip version or commit**

Reproduced on source based on
`06bc8db75c71142ed108e0f331394c5187015d6a`. The same guard is present at
`1a6017d6460267ad89d7e1784e2b521c28d8e9ac`.

Related: #17156 proposes separate workspaces for child tasks. This
repair preserves the current inheritance contract and enforces the
remote writer lock. #16911 addresses child bindings across repositories.

## What Changed

- Remove the original-task equality restriction for active remote
workspaces. Keep the existing persisted-binding and retained-source
authorization path. Explicit task-root selection follows the existing V1
filesystem contract; task-assignment grants do not define filesystem
permissions.
- Keep closed workspace rejection and unfinished-writer checks.
- Add database-backed regressions for inheritance, replay, competing
children, an unbound task, private source data, company isolation, and
closed records.
- Extend real save/restore tests for inherited isolated workspaces and
operator branches. Keep shared-workspace discovery coverage.
- Update the development guide and workspace maps.

## Verification

- Red: before the repair, the inherited isolated/operator cases fail
with `Workspace ownership changed.` The shared case passes. The unfixed
suite has five failures and four passes.
- Green: 11 reservation cases pass with real PostgreSQL 18 in an
isolated Docker container.
- An earlier run of the four affected workspace/preparation/trust suites
passed 191 tests. The review follow-up passes all 15 selected
reservation/save/restore cases. Inherited cases remove the original
files, use a distinct allocation and target, restore the saved file,
append child work, and independently read that work from the child's new
snapshot. Shared-source discovery stays covered. The filter excludes 42
other integration cases.
- `pnpm -r typecheck`, `pnpm build`, `node scripts/check-maps.mjs`, and
`git diff --check` pass. A direct server typecheck also passes after the
final test edit.
- `pnpm test:run` stopped in its first chat shard: 338 passed, one
Discord receiver-lease setup failure, 1,478 outside the shard. The
failing test passes in isolation on both the unchanged baseline and the
fix. Its suite-order failure is not explained by that retry and remains
recorded. The unchanged baseline also fails three other Discord
publication cases in that chat shard, while its next chat shard passes.
This does not reproduce or explain the original lease failure; both
results remain recorded. CI is complete on `e697f6e1b8`: 54 successful
check runs, one successful legacy status, three skipped checks, and one
neutral check. No check is pending or failed. Greptile gives this commit
5/5 with no remaining findings. The security reviewer accepted the
V1-contract explanation; both review threads are resolved.
- Live sandbox acceptance remains unverified. The available test
credentials could not resolve the required sandbox snapshot. The
provider rejected creation before workspace execution, and a scoped
follow-up found no allocation. No live model turn, deployment, or
original-task recovery is claimed.
- Local environment: macOS arm64, Node 26.4.0, pnpm 9.15.4. Native
PostgreSQL startup hit the host semaphore limit; tests use disposable
Docker databases. No shared database was reset.

## Risks

- A bound child can now write after the prior writer releases the
workspace. Incorrect binding or access checks could expose source data.
Regressions cover unbound, private-source, and foreign-company
rejection.
- Concurrent children must not become two writers. A real transaction
race grants exactly one reservation; saved-file tests keep the second
writer blocked until save completes.
- No schema or migration changes. This PR does not change task-creation
inheritance, requested models, credentials, trust, approval gates, or
recovery budgets.

## Model Used

- OpenAI Codex, based on GPT-6. The exact serving model ID and context
window are not exposed in this session. Used reasoning, tool use, code
execution, and browser diagnostics. No sub-agents were used.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass — the targeted workspace
suites pass; the full local chat-suite failure and baseline comparison
are documented above
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-02 09:36:05 -06:00
06bc8db75c fix(runner): install verified API artifacts in execution workspaces (#18494)
## Thinking Path

> - Paperclip manages AI agents and their work.
> - Native agents use authorized API tools to read saved results.
> - Copying a large response as model-generated text can lose bytes.
> - The execution workspace needs an exact copy of the saved artifact.
> - This change copies the authorized bytes without shell API
credentials.
> - The runtime verifies size and SHA-256 before it reports success.
> - A live evaluation checks capture origin, installation and delivered
bytes.

## Linked Issues or Issue Description

**What happened?**

A native agent lost one byte while copying a 24576-byte API text page.
Existing capture and paging controls passed. The runtime had no verified
saved-artifact-to-workspace copy tool. A separate historical screening
refusal does not establish capture corruption.

**Expected behavior**

An authorized native run can install the complete saved artifact. The
stored and installed bytes must match in size and SHA-256. A conflicting
file must remain unchanged. A lost publication receipt must not cause an
unsafe repeated write.

**Steps to reproduce**

Run
`server/src/services/native-runtime/artifact-transfer.integration.test.ts`
on baseline `c46b8f35add9255fc71be294d27f5a7865bcb47f`. Its capability
assertion fails because `download_artifact` is absent. Apply this PR and
run the same regression with the filesystem and API controls. It
verifies 388131 synthetic bytes through the authority and installation
boundary.

Refs #18429. Related #17393, #17086 and #17285 cover paging, transfer
foundations and remote output reads. This PR adds the inbound
installation contract.

## What Changed

- Add `download_artifact` for supported standard-mode native runs, with
a 10 MiB limit.
- Reuse current company, task, run, asset-content and responsible-user
access checks. Check authority again before publication.
- Bind installation to the current execution lease. Stage through
confined Linux descriptors and publish with an atomic create-only link.
Keep API credentials out of execution commands.
- Verify bytes at storage and execution boundaries. Reject unsafe paths,
symlinks, different existing files, truncation and corruption. Reconcile
an unknown publication through verification only; an identical explicit
retry remains safe.
- Add API documentation, access-map entries and content-free audit
records.
- Preserve only the pinned Daytona SDK numeric HTTP status when failed
creation cleanup is unconfirmed. Keep provider exception messages and
headers private.
- Keep only the finished runner binary and portable provider pack in
their builder layers. Remove Rust targets/downloads and the Node install
workspace/store before export. Report tree sizes.
- Add one explicit Codex/Daytona Product E2E cell. Its independent
oracle checks the server capture audit, redacted tool receipts, stored
source, delivered attachment and browser link after reload. Uploaded
substitutes and one-byte loss fail.

## Verification

- Merge update at `6766b46553cab5b9787ade87a002eccaf50e68fc`: merge
current master and preserve both explicit suites in the catalog. Focused
catalog, image and oracle checks: 122 pass. Filesystem and authority
integration: 20 pass. Maps, module boundaries and whitespace checks
pass. New-head CI and Greptile are running. Full local build and
typecheck remain unavailable because cargo is absent.

- Behavioral red/green: the absent-tool regression failed before
implementation and passed afterward. The initial missing-package attempt
is recorded as setup failure.
- Linux filesystem and real PostgreSQL/authority integration: 19
filesystem tests and 1 authority test pass. Existing API authority,
capture and paging controls: 70 pass, 2 skipped. Provider transport in
these integration controls is simulated.
- Qualification calibration: 118 focused tests pass. The real
persisted-event redaction case and a byte-identical uploaded substitute
each failed before their oracle repair. The unchanged controls then
passed. Harness typecheck passes.
- Full recursive typecheck and build pass locally on the integrated
production source at `086f7a2901`. Later commits change only
qualification tests and documentation.
- Structural map/module checks and whitespace checks pass.
- Full local `pnpm test:run` was attempted by the implementation worker
and stopped under its 8 GiB memory limit, with no full-suite verdict.
Current-head CI must supply the full test result.
- The complete local Product E2E support suite has 13 failures. The
unchanged pre-qualification baseline reproduces all 13: host PostgreSQL
semaphore capacity, stale timeout/profile/workflow inventory
expectations, and expired fixed-date allowance fixtures. This is not a
full local suite pass.
- Earlier CI at `086f7a2901` failed a browser test during cleanup
cancellation with a database lock timeout. It remains recorded. All
browser shards passed on both later fully checked heads.
- Two qualification campaigns were canceled during setup before provider
execution while correcting the oracle. They provide no live product
verdict.
- Previous-head CI at `28fa001457f59df1c300c016dc569049e72d0061`: 53
checks pass, 3 intentional selection skips; no failed or pending checks.
- Real image/export regression: campaign 41272351780 compiled the Linux
runner and passed root/unprivileged CLI and transport checks, then
failed BuildKit export with `no space left on device` (exit 102,
filesystem 99.99%). No provider cell ran. Removing the Rust build trees
alone was insufficient: campaign 41273604815 also failed during
provider-pack export with exit 102. Commit `5bbb549c54` also
consolidates dependency installation and pack construction so the
disposable workspace/store can be removed in the same layer. All 122
image/oracle/catalog checks pass. Image and remote-pack publication then
passed in campaign 41275196741 after cleanup changes plus a scoped
60-to-120 GiB expansion of only its delete-on-termination builder disk.
The VM terminated and the expanded volume was deleted. This does not
establish that cleanup alone makes the default 60 GiB builder
sufficient.
- The Daytona admission probe then failed before agent creation, with
unconfirmed provider cleanup. The queued continuity case was canceled
because it shares this prerequisite. No artifact-transfer or continuity
success is claimed.
- Status-diagnostic regression: the original generic wrapper failed the
HTTP-status assertion. After the repair, the full plugin suite passes
501 tests, with 7 skips; its standalone TypeScript check passes.
Controls reject invalid status values, avoid accessors, preserve the
original create status and exclude credential canaries.
- Previous-head Greptile: 5/5; its summary names
`28fa001457f59df1c300c016dc569049e72d0061`. All review threads are
resolved.
- Live artifact transfer and three-turn warm continuity: NOT VERIFIED.
The diagnostic case in
https://github.com/paperclipai/paperclip/actions/runs/41277598289
confirmed Daytona HTTP 401 before agent creation. The configured
`DAYTONA_API_KEY` in the existing `runner-e2e-paid` environment needs
verification or refresh. The queued continuity control was not run after
its shared admission prerequisite failed. No further provider attempt is
planned until the credential changes. Unconfirmed provider cleanup
remains recorded.

## Risks

- Source-provenance changes can repeat the provider dependency install.
The combined build layer trades install-cache granularity for lower
retained disk use.
- Linux descriptor semantics and Node are required on the execution
host. Unsupported providers and restricted runtime profiles fail closed.
- Storage reads buffer at most 10 MiB. A provider outage can leave a
reserved staging file. Partial bytes never become the destination.
- A lost publication receipt can leave a complete file with an unknown
result. Recovery verifies the existing file without installation.
Conflicts are never overwritten.
- Artifact contents remain untrusted. The copy does not bypass screening
or authorize downstream execution.
- Live qualification uses the governed Codex API profile. It does not
establish every model, subscription profile, platform or historical
failure cause.

## Model Used

OpenAI GPT-6 in Codex assisted with diagnosis, code, tests and
qualification. The desktop runtime does not expose a more specific model
deployment ID or context-window size. The model used reasoning, source
inspection, tools and code execution. The native implementation agent is
configured with OpenAI `gpt-6.1-sol`.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: devinfoley <139239+devinfoley@users.noreply.github.com>
Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-02 08:27:09 -06:00
DottaandPaperclip 006d5691a6 feat(server): support volume-free web server handoff (#18518)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Its web server also owns controller admission and user commands.
> - A rolling deployment starts a replacement before the old server
exits.
> - Shared database state alone does not preserve local agent files,
browser chunks, or in-process commands.
> - This pull request adds an opt-in ephemeral server contract and a
local overlap test.
> - The benefit is a web server that can relinquish traffic and local
files without losing acknowledged work.

## Linked Issues or Issue Description

Refs #18403, #18327, #18335, #18341.

**Current behavior**

The control-plane web server still has local agent-file authority and
local command targets. A new container can miss saved bytes or send a
command to the wrong process. An existing browser tab also needs chunks
from its original build.

**Proposed behavior**

Eligible servers share only PostgreSQL, object storage and stable
secrets. A replacement waits for readiness. The old server drains
admitted requests, keeps owner commands available through handoff, and
releases controller leases. Explicit maintenance adopts existing files
before the volume is removed.

**Reason and benefit**

This is the application prerequisite for rolling app-only deployments.
Schema migrations and permanent multi-replica operation are outside this
change.

## What Changed

- Store agent-file manifests in PostgreSQL and immutable bytes in S3.
Treat local roots as disposable projections. Preserve existing
permission checks and edit conflicts.
- Add an explicit migration, eligibility and object-retention command to
the production runtime bundle.
- Add `/api/ready`, admitted-request drain, browser restart signaling
and retained immutable UI chunks.
- Carry transaction-aware work hints across controllers during handoff
and active execution. Keep listeners closed when idle.
- Deliver durable Stop and runtime responses to the execution owner.
Recheck request lifecycle and access before response dispatch.
- Reject local-only configuration in ephemeral mode. Keep the feature
disabled for existing installations by default.
- Add an isolated PostgreSQL/S3/proxy/browser deployment harness with
independent server homes and retained failure evidence.

## Verification

- All CI checks pass on `ce17b95019d3cf1cabd357d19b6d37f96782cc5c`:
workspace typecheck, build, Runner checks, server/general tests and
browser shards. Greptile reviewed the runtime changes at 5/5 with all
findings resolved; the final commit updates maps and the plan.
- Local targeted checks passed: coordinator 27; Stop/recovery 33;
PostgreSQL command delivery 6; route/workspace regressions 8; bootstrap
Stop 1; restart recovery 75. PostgreSQL command tests simulate the
provider edge.
- Local browser proof passed 91 reads and 19 saves; reconnect took
1,013ms. The tab opened Audit from S3 after deletion of A's whole
home/build. This uses compiled workspace code and local-trusted auth,
not released containers or live agents.
- Local workspace typecheck/build passed; current server and runtime
bundle passed. The earlier broad local suite was stopped after three
hours and is not a passing receipt. Its retained failures and isolated
reruns are documented in the plan.
- Stacked #18526 adds stricter graceful-exit proof, an unready
replacement control, live Runner qualification and a Stop handoff
correction. Hosted enablement remains gated on those results and Cloud
#1096. No hosted stack has been enabled.

## Risks

- Apply migration 0422 before enabling the feature. Existing data must
pass each owner's migration and eligibility checks. Do not discard a
volume based on a single migration page.
- Durable manifests remain authoritative after the opt-in is disabled.
Rolling back to a binary that ignores them is unsupported.
- Cold directory restoration and complete shutdown timing still need
qualification before enabling a hosted stack.
- Retained UI assets must cover the supported browser and rollback
window. Cleanup is explicit; no new idle maintenance polling is
introduced.
- This change does not claim production zero downtime or authorize a
fleet-wide enablement.

## Model Used

OpenAI Codex, GPT-6 family. The exact serving model ID and
context-window limit are not exposed in this session. Used reasoning,
code editing, shell execution and browser automation.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-01 01:58:54 -06:00
34f8d25089 fix(github): expose review finding categories (#18429)
## Thinking Path

> - Paperclip manages AI agents and their work.
> - GitHub review bots submit structured assessments through task-bound
tools.
> - Each repository can set its own finding categories.
> - The schema accepts a string, but the server rejects values outside
the saved review policy.
> - Review instructions did not list the accepted values. The error did
not list them either.
> - This change gives agents the values before submission and keeps
server validation.

## Linked Issues or Issue Description

**What happened?**
Review submissions failed with an unknown finding category. The agent
corrected the assessment before publication. The sampled trace has two
rejections followed by a processed review. Historical tool inputs are
null. Authorized diagnostic inspection found no saved raw provider trace
for the representative run. The exact rejected values remain unknown.

**Expected behavior**
Agents can find the accepted categories before submission. Unknown
values still fail validation.

**Steps to reproduce**
Set a custom finding category. Start a review. Submit a different
category. Before this change, the instructions and error do not list the
accepted value.

## What Changed

- List configured categories in manual and automatic review
instructions.
- Return categories from the saved assessment policy in `begin_review`.
- Describe the dynamic constraint in the shared discovery schema. Keep
custom categories valid.
- List accepted values in category errors. Keep authorization and
publication checks.
- Add contract and database integration tests. Update documentation and
access maps.

### Hypothesis and thesis for a fix

The missing category guidance can cause avoidable submission retries. A
model can also ignore the policy returned by metadata reads; the
historical inputs do not establish which occurred. The repair belongs to
the GitHub review contract. Use the saved policy categories at review
start, explain the constraint, and retain server rejection. A fixed
global enum would reject valid custom categories.

## Verification

- Baseline `f1d7808`: two new contract assertions failed for missing
category guidance and error detail. The same assertions pass after the
change.
- `pnpm exec vitest run
server/src/services/chat-github-review-policy.test.ts
server/src/services/chat-github-tools.test.ts`: 41 passed.
- `pnpm exec vitest run
server/src/__tests__/chat-channels.integration.test.ts -t 'returns
snapshot finding categories'`: 1 passed. Real PostgreSQL and service
code; simulated GitHub HTTP. Checks policy changes, rejection before
publication, accepted custom category persistence, and processed
publication.
- `node scripts/check-maps.mjs`: passed. Structural evidence only.
- Shared TypeScript check passed. Server TypeScript checking was killed
by the 8 GiB memory limit, including a separate retry after the other
checks stopped.
- Full typecheck and build could not complete: `cargo` is absent. Full
tests were stopped after concurrent checks exhausted memory. CI must
supply the full checks.
- Follow-up compiler repair: the unchanged baseline reproduces TS2352 in
the category discovery test. Runtime matchers replace the unsafe schema
cast. They retain both guidance and custom-category assertions. The
repair is commit `0dcb94c676`, with current master merged at
`14d7052854`. The final head is
`c46b8f35add9255fc71be294d27f5a7865bcb47f`; the remaining code-comment
review finding was removed and resolved.
- Final-head CI: all gates pass, with no failed or pending checks.
Greptile gives this head 5/5 with no outstanding findings; the only
inline thread is resolved. The workspace test shard passed on one
bounded rerun after an earlier CLI child-server readiness timeout; no
code change was made for that rerun.
- The review host passed full recursive typecheck and build after the
compiler repair and master integration. Fresh database rechecks hit the
host PostgreSQL semaphore limit. The full local test command hit a
pre-existing chat line-selection failure before assertions. These local
limits do not replace the passing final-head CI evidence.
- No live model or GitHub publication at the changed revision. No
deployment or merge.

## Risks

- Instructions add policy text. An agent can still ignore it.
- Existing bot catalogs get the schema description when tools are
synchronized. Trusted review instructions and `begin_review` also expose
categories.
- The service test uses simulated GitHub HTTP. It does not prove that
deployed agents avoid retries.

## Model Used

The original worker used OpenAI `gpt-6.1-sol` through Codex with
reasoning, tool use, and code execution. A later Codex review repaired
the test compiler error. That review runtime exposes GPT-6 but no exact
snapshot or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: devinfoley <139239+devinfoley@users.noreply.github.com>
Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Dotta <bippadotta@protonmail.com>
Co-authored-by: cryppadotta <34892728+cryppadotta@users.noreply.github.com>
2026-10-31 22:06:32 -05:00
DottaandPaperclip e09f40888a fix(recovery): preserve native task access during resolution (#18489)
## Thinking Path

> - Paperclip controls agent execution and task ownership.
> - A native run needs its task binding until it reports its result.
> - Direct task updates already reject self-status changes that remove
this binding.
> - Recovery resolution can also change the source task status.
> - That route did not use the same protection.
> - This change rejects the unsafe status change before the task or
recovery receipt changes.
> - The run can then use semantic completion while normal recovery
permissions remain effective.

## Linked Issues or Issue Description

Refs #18411.

**What happened?**

A running native owner can resolve an older recovery action with
`sourceIssueStatus: "in_review"` or `"done"`. The request succeeds and
changes its own task status. That can release the execution binding
before the run reports. Later task tools fail with
`paperclip_runner_tool_binding_not_authorized`.

**Expected behavior**

Return a conflict before the task status or action receipt changes. Tell
the run to report through `paperclip_finish` or `paperclip_block`.
Preserve unchanged-status resolution, Board recovery, legacy-agent
behavior, and the existing conversation and handoff rules.

**Steps to reproduce**

1. Give a running native owner the task execution lock and an older
recovery action.
2. Call `POST /api/issues/{id}/recovery-actions/resolve` as that run.
Use `outcome: "restored"` and `sourceIssueStatus: "in_review"`.
3. Before this fix, the route returns 200 and changes the status. After
this fix, it returns 409 with `native_run_status_reported_by_finish` and
makes no task or action mutation.

## What Changed

- Reuse the existing native self-status guard inside recovery
resolution's source-task transaction.
- Let the guard receive the requested status from either route contract.
- Add HTTP route regressions for rejected review/completion transitions
and continued task editing after rejection.
- Cover unchanged-status native resolution, Board recovery and
legacy-agent resolution.
- Update execution semantics and both recovery maps.

## Verification

- Baseline `91fdf02`: the two new rejection cases fail because the real
Express route returns 200. Three safety cases pass.
- Fixed source: all 198 tests in
`server/src/__tests__/issue-agent-mutation-ownership-routes.test.ts`
pass.
- `node scripts/check-maps.mjs` passes. This is structural evidence.
- Greptile and Paperclip Review both give the integrated head 5/5 with
no actionable findings.
- Full recursive typecheck, full build, and a repeat of all 198 route
tests pass at integrated head
`0fa104dfb240500acd01303cd446363ea39c6c75`. All current-head CI gates
pass (55 successful checks/statuses; no failed or pending checks).
- The full local `pnpm test:run` command fails in chat-test line
selection with `No test found`, before assertions. This also occurs with
the unchanged master chat test file. It is not a passing full local
suite.
- The route tests use the real route, validation and guard. They mock
service and database boundaries. The observed hosted failure establishes
the original mechanism. Fixed-source live provider acceptance remains
unverified. No deployment or merge is part of this PR.

## Risks

- A native owner now receives a conflict for a previously accepted
recovery status change. It must use the existing semantic result path.
- This prevents a new binding loss. It does not prove that an old remote
executor stopped or recover missing provider state.
- Board, legacy, conversation and handoff behavior retains existing
authority. The regression includes representative allowed paths.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, repository tools and code
execution. The runtime does not expose a more specific snapshot ID or
context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass (198 focused route cases;
the full local command has the recorded selection failure)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-31 22:06:08 -05:00
DottaandPaperclip 5e4cc01073 feat(workspaces): keep remote files off the webserver disk (#18403)
Keep native sandbox workspace files independent of the webserver disk. Use encrypted saved versions and Postgres ownership so a replacement server can recover files and continue work. Enable the path by default for new eligible workspaces when durable storage is configured.

Preserve explicit opt-outs and existing host workspaces. Include safe snapshot repair, Files access, import, migration and retention. Bound saved-Files resources, preserve imported Git recovery, reject unfinished Git operations, publish immutable concurrent captures, and verify permanent object-version deletion.

Validated 471 targeted local controls, build/typechecks, all 40 CI partitions, fresh Greptile 5/5 and security review. The PR records original failed attempts and scoped retries.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-31 14:54:01 -05:00
Nicky Leach 6484f96c28 fix(workspaces): inspect storage only when needed (#18410) 2026-10-31 11:43:18 -07:00
DottaandPaperclip 59da15066a feat(runner): deliver native Kimi Code (#18391)
Deliver native Kimi Code setup, exact models, scoped credentials, verified packages and runtime packs. Preserve current upstream release attestations and restore verified same-run remote retry dispatch without weakening process ownership.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-30 22:26:15 -05:00
DottaandPaperclip 8ff812cdde feat(chat): deliver proactive task messages to agent chats (#18374)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Agent Chat gives each person a persistent conversation with each
agent.
> - Tasks and routines produce results outside that conversation.
> - Those runs need a safe way to bring a requested result back to the
person.
> - The server must select the agent's own chat and check the source
task's access rules.
> - This pull request adds proactive chat messages and unread
indicators.
> - People can see the result, open its source task, and reply in the
same chat.

## Linked Issues or Issue Description

**Subsystem affected**

Server, native runner tools, shared contracts, database, and UI.

**Problem or motivation**

An agent can report progress on a task or comment on an authorized task.
It cannot send a routine result to its own standing chat with the
responsible person. A morning review routine therefore cannot leave a
visible digest in that person's chat.

**Proposed solution**

Add `send_chat_message({body, idempotencyKey})` and `POST
/api/agents/me/chat/messages`. The server selects the company, agent,
and responsible person from the active run. It saves an attributed
comment and audit record in one transaction. The chat shows a
source-task link and per-person unread state.

**Alternatives considered**

A destination parameter on a generic comment tool would expose
unnecessary routing authority. A new delivery worker would add another
durable delivery path. This change uses a dedicated tool and the
existing comment and live-event paths.

**Roadmap alignment**

This extends the experimental Agent Chat capability in `ROADMAP.md`. The
existing `enableAgentChat` setting controls it. Related public work:
Refs #13282, Refs #13283, and Refs #14408. Searches for proactive chat
and unread chat found no duplicate PR.

## What Changed

- Add a focused messaging service shared by the native tool and HTTP
route. It checks current run ownership, execution mode, recipient
membership, task access, and task privacy.
- Reuse the canonical company/agent/person conversation. Save the
comment and audit record together. Keep task completion and chat
execution separate from delivery.
- Add source-task provenance and source-scoped retry keys. Identical
retries return the saved receipt. Changed content returns a conflict.
- Enforce the conversation's fixed agent at the shared comment-write
boundary. Keep normal reply cancellation and session checks.
- Add chat unread state, accessible agent dots, aggregate Chat
indicators, and visible-message read cutoffs. Refresh through existing
live events.
- Add the request-key constraint, native tool contracts, documentation,
capability maps, stories, and regression coverage.

## Verification

- Local delivery/security proof: all 38 proactive-message cases pass.
Eight credential-scope regressions and four quota regressions fail
against the prior source. The repaired delivery and canonical
cross-issue cap suites pass all 49 cases; all 31 OpenAPI tests, server
typecheck, and capability-map checks pass. The shared per-run cap covers
native and HTTP sends, mixed ordinary mutations, concurrent last-slot
contention, and retry/recovery without double charging.
- Credential tests preserve the authenticated person and authorizer;
reject bridge/test credentials and persisted skill-test runs after
task-mode changes; and recheck API-key revocation, scope, and
responsible person after destination locking. The earlier
delivery/native-authority suites passed all 74 cases before the four
quota additions.
- Four PostgreSQL contention cases cover native and HTTP sends plus
retries during a native chat mutation. All four deadlock against the
earlier source and pass with destination-before-source/run locking.
Recovery and human-reply delivery enqueue only the human comment; a
proactive digest never wakes the chat agent.
- Passed 108 companion conversation, native-authority, and OpenAPI
tests; 112 runner catalog/workflow-report tests; 47 completion-delivery
tests; and 25 project-handoff tests. Focused runner tests cover native
tool availability without generic API tools.
- All 327 affected UI tests, UI typecheck, token gates, and catalog
checks pass. The read hook retries at most three times, respects server
retry delay, coalesces only seen cutoffs, recovers on reconnect, and
cancels on scope changes.
- Real browser journeys with a deterministic process agent verify
routine-to-chat delivery, first-chat creation, unread state across
reload, the source link, secondary chat navigation, and a follow-up
reply referring to the digest. This does not qualify live GitHub
retrieval or model output quality.
- The Storybook showcase uses production components with deterministic
network fixtures. Rendered interactions pass for the landing, ordinary
read success, transient read recovery, and persistent failure after
bounded retries. Both Chat navigation variants update from two unread
chats to one while only Kodi's dot clears. Mobile and light variants
were reviewed. The existing Coordinator Recents label contrast finding
is unchanged; no Linux visual baseline archive exists.
- Current master's independent sandbox migration retains 0418.
Regenerated the feature migration as 0419 from the combined schema and
retained exactly the newest five snapshots; numbering/safety, replay,
and schema-drift checks pass.
- Workspace typecheck and build passed before PR preparation; canonical
server/UI typechecks passed again on the combined tree. Migration
`0419_slippery_impossible_man.sql` passes safety and schema drift checks
on disposable PostgreSQL, including interrupted index repair, concurrent
migrators, one-time owner read-state backfill, preserved receipts, and
two SQL replays. A default five-second local snapshot comparison timed
out; a diagnostic 30-second run passed without drift.
- Earlier failures are retained in the record: full local `pnpm
test:run` and broad shards encountered embedded-PostgreSQL startup,
timing, and provider-recovery failures. Thirteen selected
external-channel cases pass in isolation on the original and changed
sources; an unordered comment-row assertion now explicitly orders both
reads. The earlier route registry, native tool count, runner catalog,
and accessible Chat badge-name failures were fixed and passed full
remote CI on `920b3bb7db`.
- Repeated managed-skill server8 failures came from CI's newer synthetic
merge: its Cloud guard correctly rejected the old local-disk fixture.
Master independently repaired the fixture in #18385; this branch keeps
that repair unchanged. All 57 managed-skill and Cloud prerequisite cases
pass on the combined tree, and that fixture has no remaining PR diff.
- Current reviewed head `dc16f314739a6d977bed21cb1446d0e80a541578`:
Greptile 5/5 with no findings, Superagent security assessment passed,
advisory Paperclip Review 5/5 with no findings, and zero open review
threads. All 55 current-head check runs pass, with five expected skips
and the advisory review neutral at 5/5; Snyk also passes. No checks are
pending or failing. Protected squash auto-merge is enabled and is
waiting for required code-owner approval. A normal exact-head merge was
refused by the base-branch policy; no admin bypass was used. The
previous head's Superagent quota finding is fixed and covered above.

## Risks

- Chat remains company-visible. Delivery rejects a source task with
private-task, project, or ancestor restrictions.
- Read state uses a comment timestamp cutoff. The server retains
database precision and never moves a read receipt backward.
- The new unique constraint changes comment query planning. An existing
regression now uses an explicit row order. The migration builds the
unique index concurrently, then takes a brief table lock to attach it.
It uses the existing top-level migration and interrupted-index recovery
path.
- The upgrade backfills missing chat-owner read-state rows at the latest
existing agent comment. Existing read receipts remain intact. New chats
can still be unread before the human participates.
- Quota observation commits atomically with delivery. A rejected send
rolls back its attempted denial audit row and any first-chat creation;
the canonical warning remains in server logs, and previously spent quota
remains enforced. Identical/conflicting retries and receipt recovery
spend no extra slot.
- This version delivers in-app only. It adds no external-channel, push,
or email delivery.
- Local full-suite acceptance remains limited by the failures recorded
above. The feature stays behind `enableAgentChat`.

## Model Used

OpenAI Codex. PR preparation and CI work used `gpt-6.1-sol` with tool
use and code execution. The earlier implementation also used Codex, but
its exact model ID was not recorded in the visible session. The
context-window size was not provided.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run focused tests locally and they pass; the broad local
failures are recorded above
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-30 21:39:07 -05:00
Devin FoleyandPaperclip 87ae20ae65 fix(server): reconcile failed sandbox cleanup with signed absence (#18407)
Reconcile failed ephemeral Cloud leases through a signed cleanup-only absence observation when local historical inspection is unavailable. Preserve failure outcomes, exact resource bindings, retention and row-version fences; grant no run-continuation authority.

All 54 current-head checks/statuses passed. Greptile is 5/5, Medium, with no findings or unresolved threads. The 38 focused tests pass; both new reconciliation cases fail without the fallback. Isolated baseline and branch idle suites each pass all 225 cases. The original broader local teardown timeout is retained in the PR, and the full local run remains in progress.

Cloud protocol support is already serving in staging. Exact candidate composition and hosted provider sleep/wake qualification follow this merge. Production has not been changed.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-30 17:04:04 -07:00
Devin FoleyandPaperclip 81ecaf0654 fix(server): bound failed lifecycle verification (#18383)
Failed lifecycle verification could allocate another test environment every minute indefinitely. Count failed host verification tests separately from claims, persist a repair wait for confirmed configuration failures or three generic failed tests, and clear it through authorized retry or execution configuration changes.

Preserve typed temporary execution-target failures through adapter checks so timeouts, transport failures and interrupted probes keep automatic recovery. Retain existing readiness, authorization, termination and cleanup gates. Document the policy and add real PostgreSQL persistence and actual OpenCode adapter regressions.

Verified 398 focused tests (one Windows-only test skipped on macOS), repository-wide typecheck and build, structural checks, fully green current-head CI and Greptile 5/5 with no unresolved comments.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-30 15:29:43 -07:00
DottaandPaperclip 0e15c92073 feat(skills): make managed content independent of web-server disk (#18334)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Agents use installed skills and exact version pins during execution.
> - Managed skills still depended on mutable directories on the web
server.
> - A replacement server could lose acknowledged edits or remove an
unassigned skill whose directory was absent.
> - This pull request makes immutable versions the authority for managed
content and installed repository reads.
> - The server can rebuild delivery files from durable content after
replacement.
> - This establishes skills readiness for ephemeral web servers. General
server draining and workspace recovery remain separate work.

## Linked Issues or Issue Description

**Subsystem affected**

Skills services, shared contracts, database receipts, Skill Studio, and
runtime delivery.

**Problem or motivation**

A fresh web server must discover, read, edit, and deliver protected
installed skills using the same database, object storage, secrets, and
supported application artifacts. It must not need its predecessor's
files or process memory.

**Proposed solution**

Use `managed` ownership with a null source locator. Read installed
content by immutable version. Prepare packages before a short
publication transaction. Persist execution selections before
materialization. Recover exact pinned runtime assets and reject deletion
while active or recovering pins exist.

**Alternatives considered**

Reconstructing a mutable installed directory preserves the old
source-of-truth ambiguity. Permanent dual writes create two competing
authorities. This change uses one managed model after a bounded legacy
conversion.

**Roadmap alignment**

This improves the existing Skills Manager, Studio, version history, and
Cloud execution capabilities. The maintainer supplied the implementation
contract. This does not add a separate skills product or deploy fleet
changes.

Related work: #18082 supplies immutable package storage. #17273
addresses edits outside the API for linked local skills; this PR keeps
that source category separate. #2648 is a closed earlier
ephemeral-filesystem proposal.

## What Changed

- Add managed ownership and focused content publication and execution
materialization modules. Keep the archive format and package storage
tables.
- Publish managed create, save, delete, fork, rename, restore, and
catalog content with version checks. Add durable create receipts.
Preserve file-save receipt responses.
- Return file version identities. Keep Studio drafts after a conflict
and provide an explicit reload action. A delayed reload cannot overwrite
newer typing or navigation.
- Persist exact runtime selections, including empty selections. Rebuild
pinned assets and verify their admitted digests on a replacement server.
- Preserve source access on forks and disconnected copies. Keep the
existing workspace policy category for managed skills.
- Add bounded conversion, eligibility, and independent verification
phases. Load persisted Cloud configuration in the standalone CLI without
seeding or changing it. Reject partial current versions against
installed inventories; recover only complete saved content or the exact
source. Document storage migration blockers and the compatible rollback
floor.
- Add separate-process PostgreSQL/S3 qualification and update domain,
retention, policy, and UI regressions.
- Pass the plugin worker manager into Studio execution, admit restricted
`skill_test` mode through native Runner contracts, and preserve admitted
scope across native and REST tools. Native tests cannot create ordinary
tasks, browse company data, or use external tools.
- Select the exact durable Studio revision even when unassigned or Beta
skills is off. Persist Studio output and audit atomically with native
task completion, preserving the result on replay.

## Verification

- Final revision `13e8af480b88ba6fea5737bac4bd81104d604792` passed full
CI: all 49 workflow jobs completed successfully ([run
41127396098](https://github.com/paperclipai/paperclip/actions/runs/41127396098)).
This includes typecheck, test suites, Runner checks, browser checks and
build. Greptile review 15 is 5/5 on that same revision, with zero
unresolved threads. The PR is ready for review.
- Local workspace typecheck and build passed after integrating master.
Focused checks passed: 33 execution/completion cases, 52 Runner HTTP
cases, 16 managed-content cases, 17 Studio cases, the new real-process
CLI regression, map checks and UI token gates. The CLI regression proves
inspection does not seed missing Cloud configuration. Server typecheck
passed after that fix.
- The independent-process PostgreSQL/S3 matrix passed through normal
HTTP skill routes. It covers A → B → C replacement, lost commit
responses, upload crashes, concurrent saves, binary contents and
executable delivery. Metadata listing and warm selected delivery retain
zero object downloads. Local timing measurements are recorded; they do
not establish hosted latency.
- Hosted A → B → C passed on the owned disposable test tenant with
external Postgres, S3 and a real remote Paperclip Computer. Predecessor
temporary homes were absent. C read and executed B's acknowledged
managed save. New runs used repository v1 while v2 was installed. Hashes
matched an independently checked exact upstream commit.
- Compatible image rollback to `6518b323` passed. Studio retained the
unassigned fork's C save. A fresh remote run executed the newer managed
content and historical repository pin. The actual shell event confirmed
expected hashes, stdout, exit 0 and mode 0555.
- Runtime candidate `9200e3fcb4` deployed successfully ([Cloud run
41124147876](https://github.com/paperclipai/paperclip-cloud/actions/runs/41124147876)).
The final Studio test delivered only the unassigned fork's exact v3,
executed its script and persisted a successful output snapshot.
Independent command-event inspection confirmed all three hashes, stdout,
exit 0 and mode 0555. All 14 installations were version-backed.
Independent verification checked all 25 versions: 23 remote objects, two
bundled database snapshots, zero blockers.
- The deployed image is `9200e3fcb4`. Later master integration, the
client-only delayed-reload draft guard and the CLI bootstrap have
separate automated proof. The CLI bootstrap was also exercised against
the tenant's stored configuration and storage through the same read-only
services. This PR does not claim that the deployed image is the final PR
revision.
- Live Studio checks exposed worker wiring, admission, access scope,
exact selection and completion-publication gaps. They are fixed. Failed
attempts remain in the evidence. The full local suite exceeded 80
minutes under host contention and was stopped. Later combined/isolated
local attempts also timed out; they are not counted as passes. Full CI
covers the integrated suites. Earlier CI found an obsolete restart-scope
fixture, which was corrected and passed all 52 HTTP cases.
- Reproduction and migration:
[`doc/skill-ephemeral-web-servers.md`](doc/skill-ephemeral-web-servers.md).
Source revisions, deployments, versions, run IDs, hashes and failure
history:
[`doc/plans/2026-10-30-ephemeral-web-skills.md`](doc/plans/2026-10-30-ephemeral-web-skills.md).

## Risks

- Legacy conversion requires stopped admission and retired
filesystem-authoritative writers. Pre-conversion binaries are not
supported rollback targets afterward.
- Cloud readiness requires remote object storage. Local provider
receipts and provider mismatches remain blockers until objects are
copied and verified.
- Linked local sources retain filesystem semantics and are outside the
cloud guarantee.
- Cold reads still fetch the existing archive format. Warm runtime
preparation retains the verified-cache path.
- Bundled reconciliation preserves an installed head. Existing release
snapshots remain selectable. An older server must not replace a newer
head with its shipped files.
- No production volumes, fleet defaults, or general deployment
coordination change in this PR.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, repository tools, code
execution, and browser use. The exact backend model ID and
context-window size are not exposed in this session. No subagents were
used.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-30 16:18:27 -05:00
DottaandPaperclip 6dcf4160dd perf(chat): load recent messages and page history on scroll (#18358)
## Thinking Path

> - Paperclip lets people manage work done by agents.
> - A standing agent chat can hold months of conversation.
> - The chat route forced full-history mode, bypassing compact task
loading.
> - A cold visit fetched lifetime run summaries and hydrated historical
transcripts.
> - This PR starts with 20 recent messages and loads earlier pages on
upward scroll.
> - It preserves the reader's position, current questions, and draft
while history grows.

## Linked Issues or Issue Description

**What happened?**

Standing agent chats forced full-history loading. A long conversation
fetched full activity and run history before it became readable. Earlier
comments also used an explicit load control.

**Expected behavior**

Open a small recent conversation quickly. Load older messages when the
reader scrolls upward. Show an inline loading state. Keep the visible
message and composer mounted through paging, live updates, and Back
navigation.

**Steps to reproduce**

1. Open a standing agent chat with hundreds of messages and completed
runs.
2. Use a fresh browser query cache.
3. Observe full activity and run reads plus transcript requests for
historical runs.
4. Compare the recent window and upward paging after this change.

Related work: #18312 and #18323 restored compact task and collection
loading. #14848 added reopening of visited agent chats. A GitHub search
found no open PR for this chat-history optimization.

## What Changed

- Return 20 contiguous recent comments for standing chats, with a stable
oldest cursor. Keep the existing compact task exchange contract. Use the
existing company/issue/time index for cursor reads.
- Keep chats compact even if their task view previously expanded
history. Retain observed messages through live catch-up and cache-backed
return visits.
- Keep fetched history pages, acknowledged sends, and the observed
recent cursor separate. Reconcile live replies without losing history
after a send or deleted cursor.
- Hydrate metadata only for newly revealed message/run IDs; preserve
prior batches while paging. Slow-send recovery refreshes the recent
window. Receipts failures have an independent retry.
- Hydrate run summaries only for loaded messages and the latest turn.
Validate batches of at most 100 run IDs and keep the existing
issue/company access rules.
- Reuse hydrated terminal native streams when only history membership
changes. Preserve retry, resume, mode changes, reconnect recovery, and
interrupted recovery reads.
- Load older messages, decision receipts, and task handoffs through
upward scrolling. Support wheel, touch, and keyboard input. Keep pending
questions visible.
- Reserve a status slot while loading. Preserve a logical message anchor
and the mounted composer. Pause failed page reads until an inline Retry.
- Add database, route, controller, and scroll regressions, plus an
opt-in production-build browser rig for long chats on desktop and
mobile. Update design and feature/access documentation.

## Verification

- The real PostgreSQL cold-open suite passes all 12 tests, including
contiguous pages with equal timestamps, complete history, company
denial, and scoped run IDs.
- Activity route and OpenAPI suites pass 53 tests. The route run allowed
local cold-import overhead; CI retains the repository's normal timeouts.
- Three new paging regressions fail against the unchanged source. The
candidate's focused paging/window suite passes 26 tests. Broader UI
verification is recorded below when complete.
- Desktop and mobile browser acceptance covers recent-only startup,
per-frame reveal geometry, delayed and failed older pages, stable
reading anchors and drafts, Back, older comment links, and one persisted
live reply.
- Full workspace typecheck and build passed locally. The final UI source
also passes its typecheck and production build.
- Affected UI suites pass: 212 controller/history/paging tests, 352
thread/scroller tests, 26 native-stream tests, plus metadata batching
and live-cache hydration coverage. The issue mutation/access route suite
passes 179 tests.
- All 22 final desktop/mobile browser journeys pass, including delayed
image growth. The isolated second-page request proof also passes six
repeated desktop/mobile runs. A separate 6,000-message, 3,000-run
fixture passes cold-open and delayed-paging checks on both screen sizes,
still opening 20 messages and loading one 50-message page.
- Final matched production timings use baseline `aa58fa1073`
(`index-BaRiMbxd.js`) and candidate UI source `f9a26b9783`
(`index-DPWTbsFF.js`, identical application source at final head
`bf71ffd5af`). Chromium 151.0.7922.34, 1440×900, 4× CPU throttle, no
added network latency, browser HTTP cache disabled, fresh application
cache for each cold visit. Both variants block service workers and use
the same warm local API server and immutable 600-message/300-run
fixture. Only document HTML is intercepted for both variants; API
requests are real. The common API revision is `109981f8c1`; subsequent
commits change only UI and tests.

| Usable conversation | Baseline median (range) | Candidate median
(range) |
| --- | --- | --- |
| Cold direct URL | 6.57 s (5.69–7.45) | 3.07 s (2.50–3.28) |
| Warm in-app return | 3.76 s (3.54–4.76) | 0.67 s (0.58–1.46) |
| Back return | 2.53 s (2.12–4.20) | 0.51 s (0.47–1.18) |

Five pairs alternate order. Every paired difference favors the candidate
for all three journeys. Readiness requires a revealed, fully visible
latest reply above the composer and an editable composer. Return timing
starts after the Tasks route renders. Cold API requests fall from
953–954 to 71; API wire bytes fall from 517–559 KB to about 49 KB.
Separate CPU profiles and request waterfalls confirm the removal of
lifetime event hydration and are excluded from the five timing pairs.
Both variants have the same expected missing optional plan document
(404) and no browser exceptions. Control recent-window API reads have
medians of 37 ms / 32 ms, with shared-host outliers up to 376 ms.

The 6,000-message recent-window SQL uses
`issue_comments_company_issue_created_at_idx` (22 index rows read for a
21-row probe). Geometry assertions retain a 2-pixel tolerance for the
reading anchor and first-reveal layout. These are local synthetic
measurements, not deployed staging latency. Earlier timing probes are
excluded because they did not isolate service workers or composer
clearance. Final head `bf71ffd5afb5684ba9105a3127f617e7adf5139c` has 55
successful checks, three optional skips and one neutral result, with no
failures or pending checks. Greptile is 5/5 with no open review
findings.

### Failure record

Early local attempts exposed an unconditional scroller wrapper that
changed the old task layout, and automatic retries on chat page
failures. Both were corrected. The original task scroller structure
stays in place. Metadata request assertions wait for initial connection
recovery to settle, then verify only the new page’s reads;
retry/resume/reconnect revalidation remains intentional.

The initial review caught a send-before-scroll cache defect; its
controller regression failed before the fix. Later rapid-paging checks
caught scroll readiness being gated by metadata after the first reveal;
readiness now stays enabled once revealed. Live replies use the separate
acknowledged-message cache, then catch up from the server cursor.

Visual review exposed a pagination wrapper bypassing existing composer
clearance. The body is again a direct scroller child; cold-open browser
checks require the full latest reply above the composer. A
resize-observer regression failed before the fix and now passes.
Controlled delayed inline images prove both pinned following and a
stable reading anchor on desktop/mobile.

The first performance fixture lacked valid native event envelopes and
caused missing-log fallbacks. It is excluded from latency claims. The
final fixture uses saved native assistant events and conversation
session generations. The live test uses a temporary fixture-agent key,
attributes the reply to an existing synthetic run, and revokes the key.
It starts no model or agent process.

Local database attempts failed during a Docker shutdown. The retained
disposable database was restored and its suite passed. Early fixture
errors included a missing conversation identity field and session
generation. Mobile test setup also selected an offscreen sidebar link
and reused queued human input. Optional announcements could intercept
input; the fixture now dismisses them before the journeys. The scroll
observer now waits for the delivered wheel event and settled animation
frames, including when the viewport is already at the top. A
concurrently running live test briefly changed another probe’s row
count; the final acceptance and timing runs were sequential on separate
fixtures. The final rig uses the visible mobile navigation and a saved
agent reply. Anchor observation waits for the user's scroll to settle
before measuring the effect of live updates.

The full local `pnpm test:run` attempt hit repeated embedded PostgreSQL
initialization failures and failures in untouched native-session
executor suites; it was stopped after the repeated environment failures.
The targeted real-PostgreSQL suite passed, and final-head CI is required
before handoff. The first CI run also caught an exact mock expectation
missing the added company scope; the expectation is updated and its
179-test suite passes. The final-head first CI attempt also stalled an
assigned child task in the existing plan-approval scenario, then hit a
heartbeat-run row lock timeout during fixture cleanup. The failed shard
and aggregate check passed on an unchanged rerun of the same commit.
Scenario assertions and timeouts were unchanged. The failure and rerun
are retained in [CI run
41116120430](https://github.com/paperclipai/paperclip/actions/runs/41116120430).

## Risks

- Historical transcript diagnostics no longer load on a cold chat open.
Saved messages and conversation events remain available; diagnostic run
views keep their full records.
- Cursor paging must not omit comments with equal timestamps. Database
tests cover timestamp/UUID ordering and the complete set.
- Prepended or late content can move the reader. Browser checks cover
retained row identity, viewport offsets, mounted drafts, and Back.
Previously loaded pages stay in the query cache for its existing
lifetime.
- Local synthetic evidence does not establish deployed staging latency.
This PR does not merge or deploy the change.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, tool use, and code
execution. The exact backend deployment ID and context window were not
exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass (affected checks; limits
are recorded above)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-30 15:12:24 -05:00
DottaandPaperclip 8f822bfcf7 fix(cloud): persist configuration and load release-image packages (#18335)
Land the approved Cloud configuration and release-image package stack.

Includes the separately reviewed adapter settings (#18335), external adapters (#18333), bundled plugins (#18336), startup configuration (#18339), and migration/package checks (#18341).

Includes the final image-owned loader and linked-dependency inventory corrections.

Verified stack head: 462716170d.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-30 19:21:33 +00:00
DottaandPaperclip aa58fa1073 perf(ui): restore fast Coordinator task and inbox loading (#18323)
## Thinking Path

> - Paperclip lets people manage work done by agents.
> - Tasks, Inbox, and Needs You must stay usable as work history grows.
> - The Coordinator views bypassed some existing collection
optimizations.
> - Navigation fetched complete decision cards for a count, and Tasks
mounted every loaded row.
> - This PR uses the canonical attention rules for small count and
task-ID responses. It also restores bounded rendering and the optimized
Inbox selection.
> - The benefit is less data and less initial rendering work without a
second definition of pending work.

## Linked Issues or Issue Description

**What happened?**

Coordinator navigation fetched the full attention feed on every cold
collection visit. Tasks rendered the entire loaded collection.
Coordinator could also select the old Inbox loader when Streamlined UI
was off.

**Expected behavior**

Fetch only the projection needed by each surface. Start with a bounded
set of rows. Keep complete task membership, accurate counts, current
permissions, and stable loaded rows.

**Steps to reproduce**

1. Enable Coordinator and open Tasks or Inbox with an empty browser
query cache.
2. Observe a complete attention-card download for the navigation badge.
3. Open a large task list and observe that every loaded row mounts at
once.
4. Disable Streamlined UI while keeping Coordinator enabled, then open
Mine and observe three overlapping compact task reads.

Related work: #17756, #3744, #17983, and #18312.

## What Changed

- Add board-only attention count and complete task-ID projections. Reuse
canonical company, privacy, addressee, deduplication, dismissal, snooze,
and archive rules. Skip card bodies, plan/image reads, and presentation
roster lookup.
- Share the small count read across desktop and mobile navigation. Reuse
the page-owned response on Needs You and Needs attention. Keep the
newest known count through navigation, including zero.
- Use the task-ID index for Needs attention and keep task row hydration
in batches of at most 100.
- Render 100 task rows initially, across the whole expanded tree. Reveal
150 more at a time through scrolling or a button. Keep existing rows
through refresh and append. Defer offscreen leaf layout with shared
tokens.
- Keep Coordinator on the optimized Inbox when Streamlined UI is off.
Use index reads for expanded project recents.
- Add real-database, component, and production-build browser regression
checks. Update the access and feature maps.

## Verification

- All required CI checks pass on
`1c68ac8957490a6c8585ba0939355f536c8120bf`: typecheck, build,
server/workspace tests, serialized database suites, and eight E2E
shards. Greptile is **5/5**, with its row-retention finding fixed and
the review thread resolved. Storybook checks were intentionally skipped;
Paperclip Review completed neutral.
- Workspace typecheck and production build passed locally. The final
rebased source also passed UI typecheck and production build. Token
gates and map checks passed.
- The attention service suite passed all 34 tests on disposable
PostgreSQL. Final targeted checks cover compact projections,
complete-set counts, quality approvals, snoozes, private tasks, and
board/company access. Database response capture confirms compact
projections do not read plans or images. All 31 OpenAPI tests passed
after registering both endpoint contracts.
- Six production-build browser journeys passed: desktop, mobile,
Coordinator Inbox with Streamlined UI off, Needs You, Needs attention,
and an older server page followed by task open/Back. They verify the
initial 100-row budget, scrolling, retained DOM identity/height, one
owner per attention read, complete task membership, 220 retained rows on
Back, and less than 2 px of return-position difference.
- The row-budget and Inbox regressions fail against original source and
pass with this change. The final three affected UI suites passed 40
tests, and the broader Inbox/IssuesList suites passed 101 tests
serially.

### Controlled production-build comparison

Baseline `b31ec0a2dc079e32272a8f618425fe92b68bbaec` versus PR head
`1c68ac8957490a6c8585ba0939355f536c8120bf`. Isolated baseline asset
`index-CS9uPxMx.js`; candidate asset `index-BxJeTQ30.js`. Both UI builds
used the same warm disposable API server and database, with 220 tasks
and 110 pending board approvals. Chromium **151.0.7922.34**, 1440 × 900
viewport, **4× CPU throttle**, loopback with no added network latency,
alternating baseline/candidate order. Cold cases use a new browser
context with network cache disabled; warm cases navigate within the same
context. Other host workloads are uncontrolled.

Readiness requires the destination collection's first visible task row,
then two animation frames. Inbox readiness waits for its canonical Mine
route so previous-page rows cannot satisfy the measurement. Five paired
samples per case; cold Inbox has a second five-pair confirmation wave
because the first result was slower. Times below are **milliseconds**;
parentheses show min–max. Paired savings are the median of individual
before-minus-after pairs, not the difference between medians.

| Journey | Pairs | Baseline median (range) | Candidate median (range) |
Median paired saving | Faster pairs |
| --- | ---: | ---: | ---: | ---: | ---: |
| Cold Tasks | 5 | 2752 (2542–3025) | 2300 (2275–2524) | 328 | 5/5 |
| Cold Inbox | 10 | 2536 (2283–2927) | 2582 (2117–2856) | 37 | 5/10 |
| Warm Tasks navigation | 5 | 2054 (1826–2479) | 1448 (1419–1548) | 635
| 5/5 |
| Warm Inbox navigation | 5 | 2020 (1485–2254) | 1568 (1289–1848) | 350
| 5/5 |
| Task → Back to Tasks | 5 | 1747 (1609–1948) | 1327 (1238–1355) | 472 |
5/5 |

Cold Tasks, warm Tasks, warm Inbox, and Back improved in every measured
pair. **Cold Inbox latency is inconclusive:** the two waves pointed in
opposite directions, with the candidate faster in 5/10 pairs. This PR
claims less badge work there, not a proven cold Inbox latency
improvement.

The canonical badge response shrank from **200,039 to 359 decoded
bytes** (encoded HTTP transfer: **8,125 to 598 bytes**). The compact
response also skips card payloads, plans, images, and presentation-only
roster work. These are measured mechanism reductions, separate from
end-to-end latency. Needs You still owns its full card feed; Needs
attention owns its complete task-ID projection. Reproduction setup and
assertions are in `tests/perf/collections/README.md`.

<details>
<summary>Individual paired readiness measurements (ms)</summary>

| Journey | Pair | Baseline | Candidate |
| --- | ---: | ---: | ---: |
| Cold Tasks | 1 | 3025 | 2283 |
| Cold Tasks | 2 | 2542 | 2275 |
| Cold Tasks | 3 | 2752 | 2424 |
| Cold Tasks | 4 | 2783 | 2300 |
| Cold Tasks | 5 | 2641 | 2524 |
| Cold Inbox | 1 | 2927 | 2702 |
| Cold Inbox | 2 | 2422 | 2629 |
| Cold Inbox | 3 | 2409 | 2606 |
| Cold Inbox | 4 | 2621 | 2769 |
| Cold Inbox | 5 | 2539 | 2856 |
| Cold Inbox | 6 | 2283 | 2117 |
| Cold Inbox | 7 | 2466 | 2558 |
| Cold Inbox | 8 | 2674 | 2286 |
| Cold Inbox | 9 | 2696 | 2389 |
| Cold Inbox | 10 | 2533 | 2183 |
| Warm Tasks navigation | 1 | 2479 | 1423 |
| Warm Tasks navigation | 2 | 2228 | 1548 |
| Warm Tasks navigation | 3 | 2054 | 1419 |
| Warm Tasks navigation | 4 | 1826 | 1448 |
| Warm Tasks navigation | 5 | 1954 | 1518 |
| Warm Inbox navigation | 1 | 2020 | 1661 |
| Warm Inbox navigation | 2 | 2198 | 1848 |
| Warm Inbox navigation | 3 | 1733 | 1497 |
| Warm Inbox navigation | 4 | 2254 | 1568 |
| Warm Inbox navigation | 5 | 1485 | 1289 |
| Task → Back to Tasks | 1 | 1721 | 1330 |
| Task → Back to Tasks | 2 | 1747 | 1275 |
| Task → Back to Tasks | 3 | 1948 | 1355 |
| Task → Back to Tasks | 4 | 1609 | 1327 |
| Task → Back to Tasks | 5 | 1790 | 1238 |

</details>

### Failed attempts and limits

- The local full repository command hit embedded PostgreSQL startup
failures and 16 failures in the untouched native session executor suite;
it was stopped. The full local suite is not claimed green. CI on the
final revision provides the broad test result.
- A concurrent local UI run hit timing failures under host contention.
Inbox/IssuesList subsequently passed all 101 tests serially. No tests
were weakened to address these timeouts.
- CI caught two integration gaps introduced during this work: missing
OpenAPI entries for the new endpoints, and an attention fixture
incompatible with the routine filters added on master. Both were fixed;
the affected 31 OpenAPI and 40 UI tests pass.
- The final revision's first CI attempt failed two untouched tests:
scheduled-retry batch cancellation and the tool-access audience/archive
race. Both failed jobs passed when rerun without changing the revision.
Their original failed attempts remain visible in [the workflow
history](https://github.com/paperclipai/paperclip/actions/runs/41083379875).
- Browser evidence uses synthetic disposable data. This PR is not
deployed staging or production verification.

## Risks

- New attention sources must preserve canonical eligibility. Both
projections call the existing collector, so they share its permissions
and complete-set behavior.
- The count and task-ID caches must not stand in for full decision
cards. Each projection has its own key under the existing attention
invalidation prefix.
- A row budget can omit descendants if applied per parent. The tests
cover one global budget across a large expanded tree, refresh, append,
reset, and incremental loading.
- Local browser evidence uses synthetic data and is not staging
deployment proof.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, tool use, and code
execution. The exact backend model deployment ID and context window were
not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass (affected suites; broad-run
limitations are listed above)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-30 11:58:53 -05:00
DottaandPaperclip 75666224d4 fix(native): use the deadline for remote health retries (#18324)
## Thinking Path

> - Paperclip manages agent work and its execution state.
> - Remote Runner processes use health reads to check their saved
process identity.
> - A failed health request cannot prove that the process stopped.
> - Three fast gateway errors can exhaust the old retry limit in half a
second.
> - The caller already gives these reads a shared 30-second recovery
budget.
> - This pull request uses that budget with backoff for read-only
failures.
> - A short gateway outage can then clear without stopping the existing
turn.

## Linked Issues or Issue Description

**What happened?**

A transient HTTP 502 during sandbox process supervision caused an active
native Codex turn to fail. The probe stopped after three attempts, even
when most of its 30-second budget remained. The run reported
`notification_transport_failed` and required workspace recovery.

**Expected behavior**

Retry read-only transport failures within the existing deadline. Keep
process identity conflicts authoritative. Do not repeat a signal after a
lost acknowledgement.

**Steps to reproduce**

1. Start a read-only process verification with a 30-second deadline.
2. Return HTTP 502 from its first three transport reads, then allow the
next read to succeed.
3. The old helper rejects after three reads. The fixed helper returns
the successful observation.

Related repairs: #16451 introduced bounded remote probes. #16835 and
#17799 require proof of process exit before replacement. This change
retains those guards.

## What Changed

- Use the existing absolute deadline instead of a three-attempt limit
for read-only probe failures.
- Back off from 250 milliseconds to two seconds. Clip each request to
ten seconds or the remaining budget.
- Preserve the original error and diagnostic when the deadline is
exhausted. Reject non-finite deadlines before an RPC.
- Add a red/green regression and a repeated-gateway-failure case around
a real listening process.
- Update execution semantics and both recovery maps.

## Verification

- Before the fix: the new probe suite failed two behavioral assertions.
The gateway case returned its HTTP 502 error instead of the later
successful observation.
- After the fix: 75 focused probe, diagnostic, process-supervision and
adoption tests pass. The diagnostic failure tests use a controlled clock
for their full 30-second budget. Their error and redaction assertions
stay unchanged.
- Map alignment and module-boundary checks pass.
- Full workspace typecheck and build pass at final commit
`ddd42f66378ebc36ec1d7e0ca1f45943473561b3`.
- The broader affected suite against disposable PostgreSQL passed 994 of
997 tests; its three startup/database timeouts passed unchanged in
isolation. The initial full default local run encountered embedded
PostgreSQL startup failures and did not complete. The four diagnostic
tests that assumed the old short retry timing now use a controlled clock
without weakening their assertions.
- Incident evidence came from Linux AMD64, Node 24.22.2, Core commit
`0c70cedce9a803bdc201324528abb35e423e7cd0`, native Codex `gpt-6.1-sol`,
and a shared ChatGPT subscription. Two separate runs recorded the same
supervision HTTP 502 within one second.
- A disposable live Daytona sandbox check passed on Linux x86_64 and
Node 24.22.1. Three injected gateway failures recovered in 3.31 seconds
on production source from `e54a355fa179022caaa6854302ff56bd85de0229`
(unchanged by the final test-only commit). The real Node listening
process had one launch, retained its exact identity and saved file
across a second read, and produced a confirmed Stop receipt. Sandbox
deletion succeeded. This is process-supervision integration evidence,
not a Codex task or model execution.
- Fixed-revision hosted acceptance and recovery of the original
conversation require rollout. This PR does not claim either. The
duration of the original provider outage remains unknown.

- Final commit `ddd42f66378ebc36ec1d7e0ca1f45943473561b3`: required `ci
/ verify` and `ci / e2e` checks pass; Greptile is 5/5 with no inline
findings. The separate Paperclip Review service has not completed an
assessment and remains queued. It is not a required branch check.

## Risks

- Persistent fast transport failures cause more read-only requests
within the same deadline. Capped backoff limits their rate.
- Missing or changed identity still returns immediately. Failed health
reads still cannot authorize replacement, process signals, or provider
replay.
- Signal requests still have one attempt. The timeout budget and
execution permissions do not change.
- No schema or package changes.

## Model Used

- OpenAI GPT-6, through Codex, with reasoning, repository inspection,
and shell tool use. The exact deployment model ID and context-window
size are not exposed by this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-30 10:50:49 -05:00
DottaandPaperclip b31ec0a2dc feat(ui): link routines to a filtered task list (#18317)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Routines create tasks that people need to inspect and manage.
> - The routines list sends its View all runs link to Audit.
> - Tasks already supports routine origin filters in its API, but the
page has no control for them.
> - This pull request adds a Routine tasks checkbox and links to that
selection.
> - People can inspect routine work in the normal task list, search, and
board views.

## Linked Issues or Issue Description

**What existing behavior does this improve?**

The routines list link and the Tasks filters.

**Current behavior**

View all runs opens Audit. People cannot select routine-created tasks in
the Tasks filter menu.

**Proposed behavior**

View all tasks opens `/issues?view=all&originKind=routine_execution`.
Routine tasks is selected. People can toggle or clear it from Tasks.

**Reason and benefit**

People can use normal task controls to inspect work created by routines.
The filter includes manually started routine runs. It excludes manual
tasks and other automatic work.

**Breaking changes**

The routines list link changes its label and destination. No API,
schema, authorization, or routine execution contract changes.

## What Changed

- Add Routine tasks under Visibility in the current, streamlined, and
legacy Tasks filters. Keep Live runs only in the same group and use Show
agent-created tasks with proper capitalization where that control is
available.
- Keep the selection in the URL through reload, search, task navigation,
and checkbox changes.
- Apply the existing API origin filter before pagination. Include
routine tasks even when other automatic tasks are hidden.
- Keep source filtering in the shared task filter module and collection
owners. Reuse the existing company-scoped issue-list contract. Hide the
live-run control in the design sandbox, which does not load live-run
IDs.
- Update regression coverage, product docs, feature/access maps, and the
toolbar preview.

## Verification

- All 58 final-head checks are complete with no failures for
`f46c2e409b20fa372d166f4721601a0471894fb0`, including successful `ci /
verify` and `ci / e2e` gates. Greptile and Paperclip Review rate this
commit 5/5 with no actionable findings or unresolved review threads. [CI
run](https://github.com/paperclipai/paperclip/actions/runs/41078093110).
- Local checks pass: full repo typecheck/build for the feature, UI
typecheck/build after the final refinements, token gates, feature-map
checks, and Storybook catalog generation.
- Regression coverage exercises both real list implementations, filter
grouping and selection, search and all board columns, URL/pagination
state, and mixed pending-decision batches. The Visibility update passed
all 89 relevant tests across separate runs. The final sandbox correction
passes all 10 filter-menu tests, including three cases that reproduced
the bug before the fix. The earlier broad UI run passed 10,043 tests
across 845 files.
- Browser proof used the actual local app with disposable PostgreSQL
data: three tasks created through the routine-run API and one manual
task. Followed View all tasks; verified the selected Routine tasks
checkbox under Visibility, toggling, reload, search, and board view.
Checked current, streamlined, and legacy filter presentations.
Screenshots show the link, routine-only results, and requested
capitalization/grouping.
- Failure accounting: the initial broad UI run found two preference
expectations that needed the new false default; those were corrected
before the full UI pass. Scrolling tests hit five-second timeouts in
combined runs and passed in isolated reruns without timeout changes. A
duplicate full local UI run was stopped after the earlier final-commit
CI UI lanes passed, with no failures reported in that stopped run.
- Full local `pnpm test:run` could not complete because native
PostgreSQL initialization exhausted the host semaphore pool. A direct
initdb probe confirmed `could not create semaphores: No space left on
device`. Browser verification used a disposable container; no host
settings or other workspace processes were changed.
- Review found that the newly exposed live-run control could empty the
design sandbox, which has no live-run IDs. The sandbox now disables that
unsupported control; its regression test failed before the fix and
passes after it.

## Risks

- Low risk. The change uses the existing routine origin and read
permissions. A routine task remains automatic work, including when a
person starts it manually.
- The routine checkbox is exposed only on the Tasks collection. Other
filter consumers retain their controls and normalize the new field to
false.
- Routine histories and Audit run links inside routine details keep
their current behavior.

## Model Used

- OpenAI GPT-6, through Codex, assisted with implementation and
verification. The exact runtime model ID and context window are not
exposed in this session. Capabilities used: repository editing, command
execution, tests, and browser interaction.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-30 10:28:58 -05:00
DottaandPaperclip 5c807d11fa fix(github): prevent duplicate review score headings (#18321)
Clarify the shared GitHub review submission contract for new and existing bots.
Remove copied score headings while preserving the structured score and saved assessment.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-30 10:19:31 -05:00
DottaandPaperclip 59e191c368 Limit first onboarding to Claude and Codex (#18309)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - First onboarding helps a new user connect the first agent.
> - Its provider picker currently includes GitHub Copilot.
> - The first setup should offer only Claude and Codex.
> - This pull request limits that picker to those two providers.
> - Users can still choose other providers when they add more agents.

## Linked Issues or Issue Description

**What existing behavior does this improve?**

The model-source picker in first-agent onboarding.

**Subsystem affected**

`ui/` — the onboarding wizard and its tests.

**Current behavior**

First onboarding offers GitHub Copilot. It can also expose other
providers when their display metadata marks them as recommended.

**Proposed behavior**

Show only enabled Claude and Codex choices in first onboarding. Keep
their automatic native-runner routing on qualified execution
environments and the silent legacy fallback on native Windows, with the
same provider UI. Keep all supported providers in the later Add Agent
flow. Require a visible provider choice when an old draft names a
provider that is no longer offered.

**Reason and benefit**

Keep the first setup focused while preserving provider choice for an
existing company.

**Breaking changes**

Old Copilot or other provider drafts require a new choice in first
onboarding. Existing agents, provider APIs, and the Add Agent flow keep
their current behavior.

**Additional context**

Related provider setup work: #15562. This change only narrows the
first-onboarding picker. Searches for onboarding/Copilot and
first-onboarding PRs found no duplicate change. This is a small
improvement to the existing setup flow, consistent with ROADMAP.md.

## What Changed

- Limit first-onboarding adapters to Claude and Codex, with existing
availability checks.
- Remove the Copilot tile, login card, connection state, model
discovery, and creation guards from first onboarding.
- Retain only migration handling for old Copilot drafts: clear the
retired selection/model/flag, restore automatic runner choice, and avoid
reusing GitHub bindings when the user selects Claude or Codex. This also
works when both onboarding providers are disabled.
- Update coverage for provider choices, disabled adapters, and old
Copilot and Gemini drafts.
- Clear the model when an unavailable saved provider changes to Codex.
- Explain how to proceed when both first-onboarding providers are
unavailable.
- Update the onboarding feature and access maps.
- Document the Windows fallback beside automatic runner discovery, with
an explicit note to default Windows to native when its runner support is
qualified. This inline migration note is an explicit requirement of the
change.
- Extend both providers' setup coverage for native and legacy
availability without forcing a runtime from the browser.

## Verification

- 282 tests passed across all onboarding component/route tests and
`NewAgentDialog.test.tsx`. This includes the separate adapter-draft
suite that CI identified as still expecting Copilot in first onboarding.
- The existing server runner-selection suite passed: 231 tests,
including native Claude/Codex runtime translation and Windows legacy
fallback. This is automated routing coverage; no native Windows
end-to-end run is claimed.
- UI TypeScript checks and the production UI build passed.
- Token gates, feature/access map validation, module-boundary checks,
and `git diff --check` passed.
- Reviewer command from `ui/`: `pnpm exec vitest run
src/components/OnboardingWizard.test.tsx
src/components/OnboardingWizard.adapters.test.tsx
src/components/OnboardingWizard.step.test.tsx
src/components/OnboardingWizardVariant.test.tsx
src/components/NewAgentDialog.test.tsx
src/lib/onboarding-route.test.ts`.
- A separate browser walkthrough on staging completed the Add Agent flow
with Codex and confirmed Copilot remained available. That walkthrough
used an existing deployment; it does not prove this branch's
first-onboarding change.
- Ponytail Paperclip Review and Greptile both scored the latest commit
`b470f7023ecb6657bd77edefbcaf2ab12fd89414` 5/5. All review threads are
resolved.
- All latest-head PR checks are complete: 55 passed and 3
neutral/skipped, with no failures or pending checks. Two server shards
passed on a single retry after an unchanged timing-sensitive test
exceeded its limit and a self-hosted runner lost its connection. No code
or test changes were made for the retry.

## Risks

- Low scope: the provider filter belongs only to the onboarding wizard.
Native Windows runner support is still unmerged (#18250 is only its
build/CI baseline), so automatic selection must retain the existing
legacy fallback. Platform selection is based on the execution target,
not the browser OS.
- Users with an old draft for another provider must choose Claude or
Codex. Existing agent configuration is not removed.
- Instances that disable both providers have no first-onboarding choice.
The wizard explains how to enable a provider or use New Agent from the
Agents page.

## Model Used

OpenAI GPT-6 through Codex. The exact runtime model ID and
context-window size are not exposed in this session. Capabilities used:
reasoning, repository edits, shell commands, and browser UI
verification.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-30 10:04:38 -05:00
Nicky Leach fba0ab8162 fix(runner): preserve GitHub helpers and Codex probe policy (#18212) 2026-10-30 07:42:10 -07:00
e345b9217d fix(runner): paginate native task searches without hidden truncation (#18282)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Native agents search tasks to find work that already exists.
> - The search schema permits 200 results, but the server returns at
most 100.
> - The response does not tell the agent that more results exist.
> - This pull request adds pages and reports the page size and
continuation cursor.
> - Agents can read the full accessible inventory before they decide
that a task does not exist.

## Linked Issues or Issue Description

**What happened?**

A native `search_tasks` request with `limit: 200` returns only 100
tasks. Historical scans recovered 167 and 173 tasks with status
partitions. This proves missing inventory and extra work. It does not
prove duplicate task creation.

**Expected behavior**

Honor the declared limit. Report more results and give the caller a
continuation cursor.

**Steps to reproduce**

Create 205 matching tasks in a test company. Call `search_tasks` with
`limit: 200`. The baseline returns 100. The fixed path returns 200, then
five when the caller uses `nextCursor`.

**Paperclip version or commit**

Baseline: `81ebe479e8db8a3d59c86cdfb894bd917734492f`.

Related changes: #16979 changes UI status filters before pagination.
#13699 adds public task URLs. Neither repairs this native limit. An
exact `search_tasks` plus pagination PR search returned no result.

Pattern: [Task searches omit cases beyond the first
hundred](https://www.braintrust.dev/app/Paperclip/p/Paperclip%20Staging/patterns/c20462d6-05fd-4862-bfbd-7bec1f2bc159).

### Hypothesis and thesis for a fix

The native authority uses `boundedLimit` with its default maximum of
100. The tool schema permits 200. The response contains only `tasks`.
The raw request and result counts agree with this cause.

Fix the native authority and its canonical tool contract. Keep the
existing `tasks` field. Add `limit`, `returnedCount`, `hasMore` and
`nextCursor`. Use ascending task IDs so task activity does not move
results between pages. Apply current company, privacy and Muse read
checks before each page. A cursor grants no access. Callers must keep
the same filters and read every page. Concurrent task changes require a
fresh scan.

## What Changed

- Honor the native search limit of 1 to 200, with a default of 50.
- Add ID cursor pagination and page metadata.
- Describe complete inventory reads in the tool contract and access map.
- Refresh the generated semantic contracts and seeded catalog identity.
- Add regression coverage for complete inventories and access-filtered
pages.

## Verification

- Red: the database integration test requested 200 of 205 persisted
tasks. Baseline returned 100.
- Green: the same regression returns pages of 200 and five without
duplicate IDs.
- The native authority and Muse suites cover company exclusion, status
filters, empty pages, invalid cursors and readable-only metadata.
- Command: `pnpm --filter @paperclipai/server exec vitest run
src/services/native-runtime/paperclip-runner-tool-authority.test.ts
src/services/native-runtime/muse-native-visibility.test.ts`.
- The test uses the real run-bound native authority and disposable
PostgreSQL. It does not use an external model or change a deployed
scanner.
- Both native authority and Muse suites pass: 71 tests. Server direct
`tsc --noEmit`, Runner `typecheck:typescript`, `node
scripts/check-maps.mjs` and generated semantic contract checks pass.
- Full typecheck and build cannot finish here because `cargo` is absent.
The full local test command was stopped after about five minutes when
the complete CI matrix was running. It has no complete verdict.
Current-head CI passed, including typecheck, build, all
general/serialized/Runner test suites and E2E. Greptile is 5/5 with no
actionable findings at `392cb7424a1fa0ec73401d5e8a10a22b504fde32`.
Optional Storybook and manual Docker workflows were skipped and are not
executed coverage. The success-example correction also passed all 82
contract tests locally.

## Risks

Task order changes to ascending ID. Pagination is not a snapshot. New or
changed tasks can require a fresh scan. Each page retains the existing
full company-list read and Muse authorization cost. This change adds no
database query loop or new background work. Existing callers can still
read `tasks`, but must follow `nextCursor` for a complete inventory. No
scanner implementation was supplied. No migration or deployment is
included.

## Model Used

OpenAI GPT-6 through Codex, with tool use and code execution. The exact
provider deployment ID and context limit are not exposed in this
session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [ ] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

The task requires the supplied branch to stay unchanged. All applicable
CI and review checks pass at the current head. Unmerged and not
deployed.

---------

Co-authored-by: devinfoley <139239+devinfoley@users.noreply.github.com>
Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-30 09:23:10 -05:00
DottaandPaperclip cd5f930558 Add shareable image galleries to task documents (#18157)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/247/changes/paperclip/247
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Task documents hold plans, reports, and image evidence.
> - Task attachments already have an image gallery.
> - Inline document images had no gallery navigation or image links.
> - This change gives each document a gallery that uses the existing
modal.
> - People can review the image sequence and share a link to one image.

## Linked Issues or Issue Description

**What existing behavior does this improve?**

Image review in task documents, including the side panel and Classic
interface.

**Current behavior**

Inline document images do not open a gallery. People cannot move through
them with arrow keys or share a link to one image.

**Proposed behavior**

Select an image to open the gallery. Use arrow keys or Previous and
Next. The URL records its one-based position, for example
`#document-report&image=2`. Reloading that URL opens the selected image.
Revision links keep their exact saved content.

**Reason and benefit**

People can inspect a document's image evidence in reading order and
share the exact view.

No matching issue was found. The latest 300 open PR titles were checked
for related document gallery work.

## What Changed

- Add a document renderer that collects rendered images in reading
order, including reference-style and repeated images.
- Reuse the gallery modal with optional index-change and focus-return
controls.
- Keep the document owner in the saved tab identity when people switch
between local and other-task documents.
- Match explicit current-task document owners with local document tabs.
Keep review and viewer parameters during gallery navigation.
- Treat another Classic review receipt as a new request while image
navigation retains the selected revision.
- Make inline image controls work with a keyboard. Keep focus in the
modal and restore focus on close.
- Keep document, revision, review, and maximized-view link parameters
during image navigation.
- Fix a Classic revision-cache race found by the browser test. Recheck a
pinned revision when the saved document head changes.
- Update the feature and agent access maps. No new server API or
permission is needed.

## Verification

- Passed 119 focused tests for document galleries, the shared gallery,
document rendering, the revision panel, and hash routing.
- Passed all 3 Chromium journeys: desktop, mobile, and Classic. These
use real uploads and saved document revisions.
- The browser journeys also check explicit current-task owners, review
parameters after reopening, other-task links after tab switches, and a
second Classic review link after Return to latest.
- Browser checks cover keyboard and button navigation, wraparound,
shared-link reload, exact historical content, invalid positions, focus
return and containment, scroll locking, and Escape, Close, and backdrop
dismissal.
- UI typecheck, token gates, map checks, and diff whitespace checks
passed.
- The UI production build passed in the browser harness.
- Earlier browser runs found and then verified the Classic
revision-cache fix. A later build exited 137 while the full test suite
ran. The browser run passed after that suite stopped.
- Full repository typecheck and build could not complete because Cargo
is absent. The full repository test run did not complete within this
sandbox. These checks remain subject to CI.

## Risks

- Image positions follow document reading order. Editing an unpinned
document can change those positions. A revision link retains the saved
sequence.
- The shared modal now uses Radix Escape handling. The existing gallery
tests and nested mobile dialog journey pass.
- No schema change or migration.

## Model Used

OpenAI GPT-6 through Codex. The runtime did not expose a more specific
model ID or context window size. Used reasoning, code editing, shell
commands, and browser automation.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-30 07:52:15 -05:00
DottaandPaperclip ed8fae8dbb fix(workspaces): preserve completed shallow sandbox exports (#18221)
## Thinking Path

> - Paperclip coordinates agent work and preserves its results.
> - Remote execution copies completed workspace changes back to the
host.
> - An agent can fetch a published branch with shallow Git history.
> - A full Git bundle omits the shallow boundary metadata and can fail
host connectivity checks.
> - This pull request carries the boundaries through the full-bundle
fallback and imports through normal Git fetch.
> - Recovery must also recognize completed native work on a reusable
lease without treating it as ordinary executor reuse.
> - Completed work can be saved without another provider turn, while
existing host history remains connected.

## Linked Issues or Issue Description

**What happened?**
Sandbox finalization can fail with a missing parent commit after an
agent checks out a separately fetched shallow branch. Re-exporting a
full bundle repeats the failure because Git bundles do not encode
shallow boundaries.

**Expected behavior**
Import the completed branch and saved files. Preserve existing host
ancestry and concurrent host edits. Keep normal Git connectivity and
workspace merge checks.

**Steps to reproduce**
1. Prepare a sandbox from one host commit.
2. Fetch a different published branch with depth one and check it out.
3. Save a result file and restore the sandbox workspace.

**Paperclip version or commit**
Reproduced against master before this repair. The regression fails with
the missing-parent error before the production change.

Related public context: #15268 covers rewritten history integration.
This repair handles shallow bundle transport before integration.
Searches found no equivalent open repair.

## What Changed

- Export shallow boundaries beside the full bundle when the delta import
lacks history.
- Unpack into a temporary shared bare repository. Keep parent
connections already available on the host and import with Git's shallow
fetch protocol.
- Reject malformed boundary values and retain existing connectivity,
branch, and concurrent-work merge guards. Keep boundary probes within 15
seconds without consuming the separate 60-second Git import budget.
- Let source-bound preservation recover reusable leases only for the
finalizer-selected, accepted successful native result and matching
completion contract. Retain provider-stop, physical ownership and
host-writer checks; ordinary reusable sources remain blocked.
- Classify invalid Git metadata separately from omittable unsafe
archives. Keep native finalization failed and preserve service-owned
file recovery; carry the sender's dedicated rejection across the command
boundary without transient retries.
- Share the failure allowlist across bounded run/activity projections
and cancelled-preservation selection. Migration `0416` rebuilds the
matching partial index; task chat retains the non-retryable recovery
notice.
- Add real Git, filesystem sandbox and database recovery regressions.
Update execution semantics and affected verification maps.

## Verification

- Red: real filesystem sandbox restore failed with the same
missing-parent/revision-walk error before the export repair.
- Green: 240 focused Git, workspace restore, sandbox transport and
native-finalization tests pass. Coverage includes both transfer paths,
malformed/oversized metadata, a genuinely shallow host with its original
boundary intact, and concurrent host work with both merge parents
verified.
- Red/green: a 14-second simulated probe left the final real Git fetch
only 45,893 ms before the budget split. It now retains over 55 seconds
after the probes; a 16-second probe exhausts its own budget before host
import.
- Red/green: an oversized read progress report was retried three times
before its distinct metadata classification. It now aborts the first
read before payload consumption, leaves the host tip unchanged and does
not retry.
- Red/green: the real metadata error was swallowed by best-effort export
and native finalization incorrectly returned success. Both regressions
now pass; all 240 focused Git/restore/native-finalization tests pass. A
PostgreSQL/filesystem fault-injection test also verifies retained files,
failed run, service-owned recovery barrier, no preservation receipt and
no new wake.
- Red/green: duplicate metadata produced 47 Git process starts before
deduplication; the bounded-work regression now passes. Oversized byte
and boundary inputs fail before Git probes.
- Recovery red: both reusable lease policies exhausted recovery despite
a selected accepted successful result. The assembled
PostgreSQL/filesystem path now passes for retained and both reusable
policies, including idempotent re-admission after exhausted automatic
recovery, saved files, no agent wake, and once-only existing-result
finalization.
- Source verification controls reject ordinary reusable leases,
rejected/failed/unselected results, another physical allocation owner,
and an active host writer without changing recorded state.
- The 78-test PostgreSQL/filesystem recovery/source suite passed before
the metadata classification correction. Its new persisted
metadata-failure regression also passes. Full workspace typecheck and
build pass at final head `69f10daab2`.
- `node scripts/check-maps.mjs` and `git diff --check` pass.
- Full local `pnpm test:run` attempts did not finish. They are not
counted as passes. Early focused runs exceeded 5-second and 30-second
fixture deadlines; the final serial suite passed all 176 tests with a
30-second per-test budget in 56.8 seconds.
- Red/green: both bounded PostgreSQL projections dropped the new code in
oversized results. All 19 source/projection cases now pass, plus an
actual index-predicate test that excludes a metadata repair hold and
still selects ordinary cancelled work.
- Red/green: an oversized sender `.git/shallow` lost its error type
before host validation. The real transport test now verifies one typed
rejection, no shallow-payload read, and an unchanged host tip. All 465
command/sandbox/task-chat tests pass, and token/migration gates pass.
- Full typecheck/build pass after these final contract corrections at
`69f10daab2`; all 20 PostgreSQL source/projection/index contracts pass.
All current-head CI checks passed; Greptile is 5/5 with no unresolved
review threads. Merged #18230 supplies the CI-cache and Linux
shell-fixture baseline repairs; their duplicate changes have been
removed from this PR. The final Runner lane passed after one justified
rerun of an unchanged authentication fixture timeout (all 11 fixture
tests also pass locally). Previous CI failures and incomplete local runs
remain recorded; live deployment and retained-run recovery remain
separate verification.

## Risks

- The fallback creates a temporary shared bare clone. Metadata is
limited to 64 KiB and 256 unique boundaries, duplicate/parent probes are
cached, and Git import has a 60-second command budget plus a separate
15-second boundary-probe budget. It runs only after a missing-history
import failure.
- Incorrect boundaries could hide real host ancestry. The importer
retains available parent connections, and regressions cover that case.
- The full-bundle fallback can transfer a bundle twice. This preserves
the existing fast delta path; removing that extra transfer is outside
this correctness repair.
- Preservation eligibility expands only for completed native exports on
reusable leases. It creates no provider turn and leaves ordinary
reusable leases ineligible. Database/filesystem regressions cover result
selection and competing physical/host ownership.
- The migration rebuilds one partial index; no tables, columns or user
records change. There are no agent execution admission, model, trust,
recovery permission, workflow or lockfile changes.

## Model Used

OpenAI Codex, GPT-6, with reasoning, code execution, and browser tools.
The exact serving variant and context-window size are not exposed in
this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 20:02:53 -05:00
DottaandPaperclip ebed7f5237 test(evals): protect Antigravity setup and two-turn delivery (#18190)
## Thinking Path

> - Paperclip manages agents and their work.
> - A provider integration must work through ordinary agent setup and
task controls.
> - The recorded Antigravity walkthrough exposed setup, delivery, and
continuation failures.
> - A repeatable check must verify real work and retain failed attempts.
> - This pull request converts all 47 recorded steps into one fixed
Product E2E journey.
> - Maintainers can rerun the case and inspect independent delivery,
cleanup, and accounting evidence.

## Linked Issues or Issue Description

Builds on merged #18187, #18188, and #18189, and consumes the shared
repairs from merged #18230 and the equivalent manual-policy declaration
from #18222. Refs #18214 for the CI task wrapper. Refs #12503 and #14938
for related legacy adapter work.

**Agent or provider**

Google Antigravity native Runner with a saved managed Google
subscription and the exact Low model.

**Why this adapter is useful**

A user must be able to add an agent, connect its account, and receive
real task results across a follow-up. Picker visibility alone is
insufficient.

**How the agent is invoked**

A fixed Playwright driver uses ordinary product controls. The agent runs
through native ACP. Independent checks use public APIs, actual
downloads, owned process observations, and native lifetime fences.

## What Changed

- Register one explicit-only case:
`antigravity-agent-journey.runner-antigravity.local.saved-subscription-two-turn`.
- Map all 47 source steps and declare saved-account prerequisites,
finite limits, and same-host macOS ARM64 scope.
- Create an agent through the ordinary picker, connect the saved
account, select Low, run Test, and wait for readiness. Save an
instruction marker, deliver a file, and update it through an ordinary
follow-up.
- Require each run's visible completed file activity, exact downloaded
bytes, committed Done result, same tagged conversation, distinct
physical owner birth, released lease, and free native fences. Verify
reload persistence.
- Stop failed native runs that still own a retry. Replay an existing
Stop with its durable request identity and wait for the matching audited
acknowledgement. A terminal reservation without a native intent remains
unconfirmed.
- Keep private evidence in the existing result, report, dashboard, and
accounting pipeline. Retain the paused QA agent and financial history
while preserving the shared account and budget policies.
- Journal only the ordinary wizard's future ID, target, name, intended
harness and expected creator before forwarding its POST unchanged. Bind
the response and interrupted recovery to exact identity reads; a pending
404 stays unconfirmed.
- Serialize private resource snapshots through temporary-file fsync,
atomic rename and directory fsync. Abort forwarding on storage failure
and preserve legacy receipts. If later journal or diagnostic writes
fail, retain the primary error, always close the browser, and attempt
the ordinary failed report.
- Add production-component browser controls and harden task-menu
readiness, alias selection, scroll restoration, failure packaging, and
one hermetic auth-test budget.
- Wait for the existing GitHub recovery fixture to register its next
deadline before asserting the original range; preserve its
nested-transaction and zero-request checks. In the decision-expiry
fixture, verify the exact saved expiry separately from the earlier
global wake of another queue.

## Verification

- Fresh registered acceptance passed on eval source
`9060f3cd01b7c3445ecdf703d72e9cf30fe42b59` and merged serving product
`61bd4ac6919c2309f766a25e62273b074cee3261`. It completed ordinary setup
and two turns with native `.5` and `gemini-3.8-flash-low`. All 16
matchers, 14 checkpoints, and cleanup passed in **165,613 ms**. Actual
downloads were **61 bytes** and **119 bytes**. Both turns passed their
own run-bound browser activity checks and reload persistence.
- Independent read-back confirms Done, a paused retained agent, the same
connected saved default account, and no active owned run. Both accepted
results have the same full tagged conversation and distinct primary
process births. All 21 observed processes retired; both leases released
and all three native fences were free after each turn. The selected `.5`
checkpoints also showed equal agent/backend session IDs; this is an
observed case requirement, not a generic ACP invariant.
- Receipts report 339,273 input tokens, 7,224 output tokens, and 202,846
cached input tokens. Subscription prices are unavailable. Billing
coverage remains incomplete, not free.
- The normal report CLI passed. All 310 files from nine original
attempts and two separate recoveries retained their hashes. The twelve
current screenshots are byte-identical, and 194 local report links are
contained and valid. The eight earlier reports were copied without
regeneration.
- Delivery source `1bf4fb04df04710b82844b3c9355767f46b5f68f` branches
from `d3f2a60e795fc60d64c8b19d1eed4d48657d5492` and merges cleanly with
current master `1d571de5f9f886d66e520800baec8fc2f67d0948`. All 41 prior
`c8b332` authored file blobs remain identical; the 42nd path is the
decision-expiry fixture contract correction. Creation ownership, the
strict durable writer, and the ordinary successful workflow remain
unchanged. Of 43 measured file blobs, 30 remain identical. The
Antigravity oracle, artifact, billing and report gates and its
suite-specific validation block remain unchanged. The actual retained
agent matches its original creator; its original request `setupId` was
not captured and is not reconstructed.
- Later master changes include model-visible workspace guidance and
rejected-terminal-report handling. Their bounded source assessment is
separate: the first actual finish failed, then a same-turn replacement
was accepted and committed. Later read-only results match both original
native-result hashes, and the complete event catalogs have no
`session.failed` event. Master #18228 also expands detection of explicit
JSON file requests. The measured create/update-and-attach `.txt` task
already required publication under both parsers; the publication
validation gate itself is unchanged. Master #18240 changes remote
workspace cache staging and adds an OpenCode index refresh. The selected
local lane returns before those paths. Master #18213 adds optional
numeric turn timing and trace boundaries. Its selected Antigravity
model, text, IDs, result and retirement semantics remain unchanged in
the bounded source review. Local diagnostic rows and awaits can change
event ordinals and latency; the oracle checks relative semantic order.
Collector coverage and latency improvement remain outside this proof.
This does not claim that the whole current runtime is byte-identical to
serving `61bd`, or relabel the measured result as a new run.
- The adopted upstream cache controls passed 3/3 with pinned real Turbo.
Forced work disables local and remote reads and writes; ordinary work
reuses local results. The original genuine-pnpm/Turbo controls remain
historical to `9060`'s earlier write-only policy. The duplicate cache
patch is superseded by #18230. Its qualification-only pnpm addition is
removed because the adopted upstream controls do not require it.
- The E2E typecheck, map checks and 277-control replay are carried from
the unchanged eval source paths. That replay passed, including the 183
Antigravity controls, catalog/connection checks and the separate
product-journey validator. The carried creation controls include 91
config/recovery cases. The final launcher suite passed 19/19, including
five real campaign finalization fault cases; the report suite passed
7/7. These final checks did not rerun the earlier 277-control group. The
canonical production-component browser spec passed in 27.4 s under its
unchanged 60 s limit before the replay. Four paused-composer cases and
the product base's build/typecheck plus 376 focused regressions were
verified earlier.
- The shipped wizard and actual API client cover persistence before
forwarding, lost response JSON, foreign/malformed requests, wrong
response identity/creator and cleanup-error preservation. Real
filesystem controls failed 5/5 before the writer repair and passed 5/5
afterward, preserving the old journal on partial-write, temporary-file
sync and rename faults. Three persistent-sync campaign controls failed
before the finalization repair and passed afterward. All five final
campaign fault cases preserve the primary failure, cleanup failure,
usage and failed report while attempting browser closure. The strict
journal still blocks the next mutation. These are provider-free
ownership controls; the Google task proof remains the original `9060` →
`61bd` acceptance.
- The decision restart check passed in the local 20-case fixture run. A
current-source real-PostgreSQL rollback control reproduced the exact
90,000 ms earlier global wake: the old equality rejected it, while the
exact durable expiry and new future-wake bound passed. The original 60 s
open-state, exact-timestamp, continuation and quiet checks remain. The
broader local run was **FAILED: 19 passed / 1 failed**, with a 15 s
timeout and a 30 s cleanup timeout in an unchanged timestamp-pagination
case. That case passed in canonical `c8b332` CI; the local timeout cause
remains inconclusive. An extra local server typecheck failed against
stale cached Runner declarations; it did not check this excluded test
file. Both limits remain recorded for fresh canonical CI.
- A broader local GitHub recovery group passed 21/22. Its unchanged
pagination case observed an unexpected config request; the log does not
establish the cause. That result remains retained, and fresh
current-head CI is the final broader gate.

- Exact delivery-head CI completed with 55 successes, two skips, and one
optional neutral review. Required `ci / verify` and `ci / e2e`, build,
typecheck, and Runner checks passed. Fresh Greptile is 5/5 with zero
unresolved threads. Optional Paperclip is neutral 4/5; its carried
recommendations are dispositioned against the public Stop contract and
selected live identity evidence.

Seven earlier converted attempts retain their failed grades and partial
evidence. Historical Paid8 and its later read-only per-run UI
observation remain separate from the fresh acceptance above. Unknown
prices and the older partial startup accounting remain explicit. Full
lineage and raw evidence remain private in the normal report bundle.

## Risks

- This case requires an authorized saved personal default Google
subscription and finite operator candidate admission. It does not test
fresh OAuth or establish global qualification.
- The physical observer supports a same-host loopback macOS ARM64
target. Cloud, Linux, and other models remain outside this case.
- A known-cost stop cannot cap missing prices or in-flight subscription
charges. Existing operator policies remain unchanged.
- Raw account/native identities stay private. Missing retirement proof
keeps resources retained. The selected cleanup mode does not test agent
purge.

## Model Used

OpenAI Codex (GPT-6). The host did not expose the exact model revision
or context limit. The model used tools for code edits, tests, browser
automation, and review.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 19:51:32 -05:00
DottaandPaperclip 61bd4ac691 feat(agents): set up Antigravity with saved Google subscriptions (#18189)
## Thinking Path

> - Paperclip manages agents and their work.
> - Users choose providers and managed accounts while adding agents.
> - Antigravity was missing from the ordinary additional-agent picker
and its saved Google path did not complete native readiness.
> - A user needs a successful Test, an enabled task action, and a stable
account binding.
> - This pull request connects the ordinary setup flow to the native
candidate.
> - It also preserves retired credential refreshes across database
failures and server restarts.

## Linked Issues or Issue Description

Built on merged #18188 and #18187. Refs: #12503, #14938 for related
legacy CLI proposals.

**Agent or provider**

Google Antigravity ACP 1.4.3.

**Why this adapter is useful**

Users need to set up an Antigravity agent and run real work through
their managed Google subscription.

**How the agent is invoked**

Native Paperclip Runner uses the pinned Antigravity ACP runtime. Exact
operator admission remains required; the local candidate result does not
enable general release.

## What Changed

- Show Google Antigravity in the ordinary adapter grid and preserve the
draft choice when setup resumes.
- Reuse the same user’s saved personal default Google subscription and
discover the exact low model through the native account.
- Run a prompt-free native Test and wait for authoritative readiness
before enabling task assignment.
- Carry the managed account through native runs and recover retired
refreshes through the existing encrypted, fsynced journal with exact
generation checks.
- Retain the latest rotated credential through verification, storage,
and partial home-removal failures. Retry the exact account’s retained
cleanup before another provider use.
- Reconcile cleanup before taking the credential mutation lock, fence
owners arriving during lock acquisition, and support nested lock holders
without a join cycle.
- Bound sign-in retirement outside database transactions and preserve
claims for the existing cleanup owner; one pending sign-in does not
block unrelated accounts.
- Cover Gemini and Pi API-key recovery, keep API-key bulk manual-model
editing usable, and keep adapter discovery available after candidate
expiry.
- Skip taskless native timer work before run or credential admission.
Preserve current master monitor and deadline scheduling.

## Verification

- The registered local saved-Google-subscription journey passed all 16
matchers in 196,520 ms using eval source `12aba` against actual serving
source `4a37ee7c`. Both turns stayed in one conversation, produced exact
downloaded files of 61 and 119 bytes after reload, and used distinct
native primary processes. All observed owners retired, leases released,
and credential fences settled. Independent readback confirmed Done work,
no active owned runs, a connected saved account, and the retained agent
paused for inspection.
- The measured runtime is production-equivalent to pre-restack
`65ef31dc` except its test-only transport fixture correction.
Current-master head `ff7c9249` preserves all 99 product paths: 98 exact
blobs and only eight inherited plugin-panel lines in `agents.ts`. Its
native binary was rebuilt for inherited Codex-only diagnostic changes;
the changed Rust behavior is outside Antigravity's ACPX execution path.
Shared native/UI changes have focused regression coverage. The recorded
live result is not represented as a measured replay of `ff7c9249`.
- Full workspace build and typecheck passed on `ff7c9249`. All 376
focused tests in 14 files passed, covering Google credential/retirement
controls and the inherited native-tool, redaction, route, and UI
recovery changes. Token gates, maps, and diff checks passed. The
required-close fixture was separately demonstrated red, then passed all
317 selected provider-wiring cases.
- [Current-head
CI](https://github.com/paperclipai/paperclip/actions/runs/40959387972)
is green: 55 successful checks, two skipped workflow checks, and an
optional neutral review check. Required `ci / verify` and `ci / e2e`
passed. Greptile and Paperclip Review both report 5/5 on exact
`ff7c9249`, with zero unresolved review threads.
- This qualifies the selected operator-authorized local
saved-subscription candidate. The original exploratory journey remains
historical evidence; the repeatable fixed-driver eval is in the next PR.

## Risks

- Google refresh recovery must preserve the exact grant, account, and
credential generation. An uncertain native owner or failed encrypted
handoff retains the private home and blocks cleanup.
- A successful local saved-subscription candidate does not qualify fresh
OAuth, API keys, Cloud, Linux, other models, or general release.
- Timer filtering changes only taskless native Runner admissions.
Existing task-bound monitors and legacy adapters retain their owners.

## Model Used

OpenAI Codex (GPT-6). The host did not expose the exact model revision
or context limit. The model used tools for code edits, tests, and
review.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 16:51:50 -05:00
DottaandPaperclip 9e09d8f51f fix(runner): clarify native approval argument recovery (#18205)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - First-task onboarding requires a saved human proposal decision
before child work can start.
> - Native proposal tools reject interaction metadata placed outside
their advertised schema.
> - The existing rejection text focuses on question forms and does not
explain the misplaced approval metadata.
> - This pull request explains the field placement and keeps approval
recovery in its original confirmation or checkbox kind.
> - It also retains safe schema guidance in the run log so operators can
identify the rejected field.

## Linked Issues or Issue Description

Refs: #18025 for native first-task proposal recipes and #16889 for safe
native schema guidance. Related open PR #18105 changes separate server
API-client guidance.

**What happened?**

A native first-task confirmation copied `version` and
`supersedeOnUserComment` to the tool root. Both belong inside `payload`.
The runner correctly rejected the call before execution, but its
feedback described question forms. Later calls kept the misplaced field
and changed the approval into a question. No proposal card was created.
The run log retained only a generic schema error.

**Expected behavior**

Keep strict validation. Explain the nested field locations. Keep a
confirmation or checkbox approval in that kind while correcting its
arguments. Save the normal pending card and wait for an actual human
decision. Retain bounded schema guidance without storing rejected input.

**Steps to reproduce**

1. Send an otherwise valid native confirmation with root-level `version:
1` and `supersedeOnUserComment: false`.
2. Observe the pre-dispatch `invalid_tool_call` rejection.
3. Move both fields into `payload` and keep `interactionKind:
"confirmation"`.
4. Verify that the corrected call creates one pending confirmation,
exact replay creates no duplicate, and child creation still needs saved
human acceptance.

**Paperclip version or commit**

The observed argument shape and initial regressions came from public
source base `c32e1ba6`. The repair is based on maintained master
`4a6f6a65`. Public tests use synthetic prompts and identifiers.

## What Changed

- Give rejected confirmations and checkboxes approval-specific guidance.
It names `payload.version` and `payload.supersedeOnUserComment` without
suggesting a question-form recipe. Other human-input errors retain
complete question-form guidance and stable question/option ID
instructions.
- State the allowed native root fields in the first-task skill and put
the metadata inside both executable proposal recipes.
- Retain the existing safe guidance in `semantic_tool_denied`
diagnostics. Keep the original rejection identity and
`paperclipExecuted: false`.
- Preserve only the exact bounded scalar diagnostic payload after
verified event admission. The rest of the envelope and all API
request/result bodies keep their existing redaction.
- Add a real native Codex transport regression and strengthen
advertised-schema, card replay, human-admission, persistence, and
privacy controls. Update the execution contract and onboarding maps.

## Verification

- Red: the native transport reproduced the malformed confirmation and
showed that the old hint omitted the metadata correction. A second red
confirmed that approval guidance still included the question-form
recipe. The corrected transport case now rejects before execution,
retains a safe hint, and dispatches one corrected confirmation that
returns a pending card.
- Red: both shipped recipe checks lacked explicit nested metadata. All
49 first-task admission tests now pass, including advertised-schema
validation, idempotent card replay, actual human acceptance, agent-only
rejection, and question-answer controls.
- Updated native checks pass on the current repair: 95 native Codex
transport tests with 2 existing ignored cases, all 32 provider-bridge
tests, and the schema-feedback unit control.
- API/case persistence regressions were red before the event-boundary
correction. All 71 affected port/redaction tests pass in a clean run at
frozen head `3be3a70f`, including the corrected envelope privacy
regression. The focused 16-test persistence/privacy group and server
typecheck also passed earlier.
- Full local `pnpm build` and `pnpm -r typecheck` pass at exact head
`3be3a70f` in a clean detached checkout with Node 24.22.0 and pnpm
9.15.4. Exact-head CI passes: [full PR
CI](https://github.com/paperclipai/paperclip/actions/runs/40950360142)
and [isolated native Runner
readiness](https://github.com/paperclipai/paperclip/actions/runs/40950359835).
- The full local unit attempt recorded a 15-second timeout in the
unrelated Microsoft Teams 100,000-character existing-comment publication
case. That failure remains recorded. The exact isolated rerun passed (1
test; 1,814 unselected). The aggregate timeout cause is unproven. That
long local run straddled subsequent source edits and also observed the
two port regressions during their red phase; it was stopped and is not
final-head evidence. The clean affected-suite run above and current-head
CI provide the final verification. No timeout or assertion was weakened.
- Release-registry CI initially rejected the native test's compile-time
schema include outside the release crate's hashed input closure. The
guard was reproduced locally. The test now reads the current canonical
schema at execution. All 10 crate-cache controls and the real native
approval regression pass afterward; the cache guard and workflow keys
remain unchanged.
- Current-head Greptile review is 5/5 with no unresolved review threads.
All required checks pass (56 success, 4 skipped). The advisory Paperclip
Review remains neutral/incomplete after one normal re-review request; no
completed assessment or score is claimed.
- `cargo fmt --check`, map structural checks, and `git diff --check`
pass.
- Source and scripted-provider checks do not prove that a model will
follow the guidance. The original live onboarding attempt remains
failed; acceptance at a deployed revision is separate work.

## Risks

- This changes repair guidance and shipped instructions. It does not
make malformed arguments valid or supply a human decision.
- Diagnostic retention adds no rejected arguments, values, or unknown
input keys. The API receipt allowlist is unchanged. The validated-event
exception restores only the safe scalar payload; optional debug and
other envelope metadata still pass through redaction.
- The existing 512-byte guidance bound, strict tool schema, company/run
binding, idempotency checks, and proposal admission remain effective.

## Model Used

OpenAI GPT-6.1 Sol (`gpt-6.1-sol`) through Codex, with tool use and code
execution. The context-window size is not exposed to this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 15:48:37 -05:00
Nicky Leach e2cfdc7e0c feat(plugins): expose GitHub credential broker to task providers (#18178) 2026-10-29 10:52:44 -07:00
DottaandPaperclip f1911a4c53 perf(skills): move repository packages out of Postgres (#18082)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/205/changes/paperclip/205
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Agents receive selected company skills before each turn.
> - Imported skills can need files from the whole source repository.
> - The current path stores those files in Postgres and reads large JSON
payloads during preparation.
> - This pull request stores verified packages in the configured file or
object store and keeps preparation queries small.
> - It also converts old rows automatically and restores missing files
from the exact saved commit.
> - The result reduces database traffic while preserving skill versions
and repository dependencies.

## Linked Issues or Issue Description

**What existing behavior does this improve?**

Company skill import, version storage, and preparation before agent
turns.

**Current behavior**

Repository snapshot bodies live in JSONB. Skill preparation can read
those bodies again even when the files already exist on disk. Historical
packages and native assets also need a bounded cleanup path.

**Proposed behavior**

Store package archives and manifests through the existing storage
service. Keep version identities, receipts, hashes, and recovery
metadata in Postgres. Convert legacy rows after the stored package
passes read-back verification. A missing package can use legacy bytes or
its exact Git commit under current repository authorization. No separate
data-migration command is required.

**Reason and benefit**

The warm path sends no repository bodies through SQL and reads no object
bytes. Cleanup runs through the existing deadline coordinator. Current
versions, active runs, explicit pins, and authored content retain their
protection.

**Breaking changes**

The normal application schema upgrade is required. Single-version and
skill-file responses keep their existing shape. Version lists,
current-version summaries, and test-run version summaries now contain
file names and kinds without file bodies. Diff and restore fetch
selected versions through the existing single-version endpoint. Older
server builds must not write after conversion unless they support the
new package format. The storage override and rollback limits are
documented in `doc/skill-package-storage.md`.

**Additional context**

Related work: #15731 preserves repository dependencies; #17923 changes
version-cache scheduling; #18080 changes delivery to remote Codex homes.
This change owns package persistence, acquisition, and expiry. It does
not replace those delivery or scheduler changes.

## What Changed

- Add company-scoped archive receipts, exact-commit recovery recipes,
migration deadlines, and a durable object-deletion queue.
- Add bounded archive upload, read-back verification, extraction,
concurrent request coalescing, and verified local caches.
- Convert old snapshots and versions automatically. Keep legacy bytes
when verification fails.
- Recover missing files through current source authorization and the
original commit. Validate repository identity, file hashes, modes, and
the aggregate hash.
- Expire unused recoverable Git packages and native assets after 30
days. Preserve active pins and the durable copy of authored or unproven
content.
- Keep warm preparation queries metadata-only. Bound file digest caches
and avoid repeated body hashing when file identities are unchanged.
- Extend the existing storage contract with cancellation. Register
package work with the existing coordinator. Optional conversion retries
retain the original bytes and may wait for ingress without blocking
sleep.
- Add regression tests, operating guidance, a deep trace, benchmark
receipts, and an optional maintenance command.

## Verification

### Final master integration and review repair — October 29, 2026

Current head: `a6065424249e763dfeac37161f1b52a9f25bd9b7`. Commit
`f8bbdd3dbd` resolves the conflicts with master `76a796e964`; the final
two commits repair the Apex deletion findings below.

- Keep both package-maintenance and version-retention notifications in
their write transactions.
- Keep the shared run-pin predicate and master's controller-lease
deadline metadata. Package expiry reads the updated protected-version
result.
- Preserve every master migration entry. Generate migration **0415
(`0415_zippy_zemo.sql`)** after master's 0414. Its skill SQL is
byte-for-byte unchanged from the previously tested idempotent migration.
Retain only the five newest schema snapshots. Migration numbering and
safety checks pass.
- Repair failed file/folder deletion: preserve a complete temporary
subtree until transaction commit, restore on upload or SQL failure, and
restore callback failures before releasing the mutation lock. Both
PostgreSQL regressions reproduced missing files before the fix and now
pass. They cover binary data, executable permissions, empty folders,
unlisted files, unchanged database/version rows, successful retry after
upload-claim expiry, and historical reads.
- Reconcile lost commit replies under the same advisory and row locks.
Check the saved version and source identity before restoring. Keep
committed deletions intact and preserve backups when the database
outcome is unknown or a newer edit exists. Four real-PostgreSQL outcome
tests pass; the prior code failed three of them.
- Full workspace typecheck and production build pass on the final
commit. All **204** focused PostgreSQL package/cache/retention/authoring
and filesystem-boundary tests pass, with none skipped.
- Apex review **18 passes 5/5**, with zero new comments on the exact
final head. All **34** review conversations are resolved.
- [Final-head
CI](https://github.com/paperclipai/paperclip/actions/runs/40914116508)
completes successfully on attempt 2. The head has **55 successful
checks**, two neutral reports, two skipped checks, and a successful Snyk
status. No checks are pending or failing. All eight browser shards pass.
- Runner Vitest 2/2 timed out once in the unchanged ACPX
controller-replacement fixture. The same job passed on the preceding
commit. One unchanged CI retry passes all five ACPX recovery cases,
**2,253** Runner package cases and **126** native server integration
cases; their standard one and five skips remain. The initial timeout's
root cause is not established. Local diagnosis also hit the fixture's
eight-second session.open timeout with an authenticated Runner; no local
Runner pass is claimed.
- Both full local `pnpm test:run` attempts were stopped when Apex
identified deletion defects and source repair became necessary; neither
is claimed as a passing full local run. The final **204** focused tests,
full workspace typecheck, and production build pass. Full-suite
acceptance uses the final-head CI jobs. The superseded merge-head CI
included runners terminated by shutdown signals; each source repair
started a new full run.

- Auto-merge is enabled for squash merge. The final head is
conflict-free and all checks pass. GitHub's active master ruleset still
requires a code-owner approval for the dependency files. The existing
review requests are with `devinfoley`, `nickyleach`, and `forgottendev`;
no policy bypass was used.
- The earlier hosted stress and full native receipts below remain tied
to `a2e597d800`; they are not relabeled as a deployment of this final
integration. The earlier local PostgreSQL startup failure remains
recorded below; PostgreSQL ran successfully for this integration
verification.

### Full native skill execution — October 29, 2026

The full native-agent acceptance gap is closed on candidate
`a2e597d800eb989d565780e7aa947d5368676444`. Two qualifying native turns
used OpenAI API / `gpt-5.4-mini` in real Daytona sandboxes, on the same
disposable hosted TEST tenant as the stress test. A follow-up on the
same task consumed a newly saved skill version.

The task text asked for the assigned skill workflow. It did not contain
the proof nonce or expected receipt. The assigned authored skill
contained a Python verifier and a random package-local nonce. The agent
read the actual installed skill files and executed that verifier against
the imported, automatically converted 1,360-file repository package. It
checked the repository file count and reference/binary bytes, and
directly executed the repository's executable probe. Independent
verification matched the emitted JSON to the nonce and expected byte
hashes. The agent persisted the same receipt as its task response;
native finalization committed, workspace finalization succeeded, and
task state became Done.

| Qualifying turn | End-to-end run time | Recorded skills.prepare |
Repository files | Binary hex | Shell receipt SHA-256 |
|---|---:|---:|---:|---|---|
| Initial task | 47.881 s | 1822 ms | 1360 | `00ff07800a` |
`a1deb30dc095f2306c7aa9cc5ec396da12c68961cf5b809f4d7c20f7fc68493b` |
| Corrected follow-up, new nonce/version | 37.974 s | 377 ms | 1360 |
`00ff07800a` |
`dbcdc33fa1376b4edc136feae1cdf770560a73292467e93619efdda20e4282a7` |

Both successful shell receipts reported `probe: STRESS18082` and
`assetSha256:
e8ea7a2f15f7bb3b332a46adbef848465884c8996595aa234748befd544d1f3a`. Their
proof nonces, selected version IDs and receipt hashes differed, and both
ran on the same task. These are observed timings, not latency SLOs; they
include real provider work. The service stress-test timings remain a
separate measurement boundary.

Earlier failures remain in the evidence:

- The original five-minute Daytona allocation timeout never reached
model execution. After normal owned-stack restore, its durable cleanup
record was `expired` / `success`. The cause of that original allocation
timeout remains unknown; a later success establishes recovery only.
- Initial continuation setup used unsupported generic agent-update
fields and returned HTTP 409 before dispatch. Setup was corrected to use
the supported skill-assignment and versioned instruction commands.
- The intervening completed native turn read repository bytes and ran
the probe, but omitted the verifier JSON under the older test agent's
overly-specific instruction file. Its strict receipt validator failed;
it is not counted as a qualifying turn. Correcting the test agent's
instruction file and sending an explicit task-scoped wake produced the
qualifying follow-up above.
- The pinned application's immutable rate card omits `gpt-5.4-mini`, so
completed usage triggered the normal block-on-unpriced budget policy.
Supported append-only accounting corrections estimated the three
completed runs using the [official OpenAI model rate
card](https://developers.openai.com/api/docs/models/gpt-5.4-mini): $0.75
input, $0.075 cached input, $4.50 output per million tokens, assuming
standard processing. Estimates totaled 12.482655 cents. Original usage
and missing-price records are preserved; the $1 hard stop and
unpriced-usage guard stayed active.
- Model shell attempts included a missing `xxd` command and incorrect
guessed file paths. Those failed calls and subsequent successful actual
verifier calls remain visible in complete event streams. No
zero-tool-error claim is made.

No product source changed during this continuation. The previously
measured contention, cold-start and memory limits remain. The later
merge resolution is covered by the separate integration checks above;
these hosted receipts qualify their recorded candidate.


### Hosted stress test — October 29, 2026

**Hosted acceptance:** full native-agent execution and a changed-skill
follow-up pass on the recorded hosted candidate. The final integration
section above records the subsequent conflict resolution and its
separate checks.

Tested baseline `929e840595c8933ca485ac7a2e99413e1e11ca64` and this
exact candidate sequentially on one disposable TEST tenant, with
external Neon PostgreSQL and actual S3. The fixture contained **1,360
files / 22.4 MB / ten skills sharing one repository**. Measurements
cover deployed skill-preparation and native-context services in an
adjacent diagnostic process, not a complete agent turn. The container
had **24 vCPU / 24 GB**.

| Warm workload | Median before → after | p95 before → after | DB
returned value bytes/preparation before → after |
|---|---:|---:|---:|
| One skill, serial | 1,060 → 125 ms | 1,303 → 155 ms | 22,610,389 →
1,771 |
| One skill, four concurrent | 4,415 → 297 ms | 5,143 → 328 ms |
22,610,389 → 1,771 |
| Ten skills, serial | 5,723 → 535 ms | 6,057 → 600 ms | 224,739,030 →
10,671 |
| Ten skills, four concurrent | 24,410 → 1,986 ms | 24,833 → 2,221 ms |
224,739,030 → 10,671 |

- Candidate warm preparation performed **zero S3 GETs**. Ordinary-pool
queries fell from 16 to 9 for one skill and 61 to 9 for ten, excluding
dedicated lock connections. DB numbers measure returned values before
Drizzle decoding, not wire bytes. Baseline/candidate sample counts were
30/100, 32/100, 5/50 and 8/48 respectively; the small baseline ten-skill
samples are comparative evidence, not SLO estimates.
- **Application-UID soak:** 800 ten-skill preparations over 10.3
minutes, four workers paced by 2.5 seconds; **zero failures**, median
**559 ms**, p95 **775 ms**, p99 **910 ms**, zero warm S3 reads. All 726
accompanying health/company-list requests returned HTTP 200. Their
end-to-end p95 was 569/502 ms, including network latency. The probe
overlaps most of the soak. Soak DB-response capture was limited to its
first 60 seconds.
- **Important remaining costs:** an unpaced 16-way ten-skill burst had
p95 **8.32 seconds** because company-level preparation serializes. Cold
preparation took approximately **1.1–2.5 seconds** for one skill and
**7.4–10.0 seconds** for ten. Ten-skill diagnostic RSS remained about
**1.17 GiB** (baseline 1.18 GiB), and the soak peaked at **1.35 GiB**. A
concurrent whole-container sample was 3.45 GB. This does not establish
suitability for a small-memory host or eliminate per-entrypoint native
asset duplication.
- **Upgrade without a manual data migration passed:** legacy snapshot
JSON shrank from 22,465,691 bytes to `[]`, with a stored package and
zero pending conversions.
- **Recovery passed:** sixteen concurrent cold requests coalesced into
two S3 GETs; full bytes/binary/executable modes matched; same-size
corruption repaired; an injected storage failure preserved warm access
and failed cold access safely. A disabled public-Git source denied
recovery, and after the actual five-minute backoff its exact SHA
reconstructed all 229 files. Cross-company descriptor access was denied.
Private-Git credential revocation was not tested.
- **Retention passed:** reclaimed 27,754,496 allocated cache bytes,
deleted an unreferenced package row and both objects, preserved aged
authored history, and expired/reacquired reconstructible Git content. A
version pinned by the failed native run was correctly retained. Only
owned fixture timestamps were aged.
- **Browser UI passed:** authored skill creation, saved edit surviving
reload, version history, and restoration of earlier content.
- **Initial native attempt (superseded by the qualifying turns above):**
one real run failed at Daytona allocation after five minutes
(`setup_failed`), before any model execution. Provider cleanup also
reported failure. That attempt does not count as a passing native turn.
Its receipt and all evidence remain preserved; its cleanup later
recorded success after normal restoration.
- Initial A/B commands ran as SSH root. Diagnostic-owned lock/cache
permissions caused one setup HTTP 500 and the first UID-1000 soak to
fail; exact fixture paths were repaired. The final soak, retention and
recovery ran as application UID 1000. A fresh UID-1000 one-skill batch
also passed (30 samples, median 116 ms, p95 321 ms, 1,771 DB value
bytes/preparation). Earlier harness-export, SSH, npm provenance, backoff
and UI-wait failures remain recorded alongside their successful retries.
- Private evidence includes raw timings, assertions, HTTP probes,
screenshots and failure/cleanup receipts. Initial failed-campaign
cleanup suspended and retained the owned TEST tenant and released the
shared QA account lease at **15:22:41 UTC**. The tenant was subsequently
resumed under its existing ownership for the native execution
qualification above. Final cleanup completed at **15:53:09 UTC**: the
account lease is released and the tenant is suspended/retained under the
original October 30, 12:24:52 UTC retention deadline. Its separate stack
lease remains held; no active or pending-cleanup environment lease
remained. The original retention window is deliberately preserved even
after successful continuation.

- Earlier hosted-tested head:
`a2e597d800eb989d565780e7aa947d5368676444`, integrated with master
`929e840595`. The earlier merge conflicts were resolved at this head.
[Current-head
CI](https://github.com/paperclipai/paperclip/actions/runs/40884087629)
passed; all checks are complete with 55 successes, two neutral reports,
two skips, and no failures. [Apex review
15](https://github.com/paperclipai/paperclip/pull/18082#issuecomment-6480257258)
passed 5/5 with zero findings on this exact head. All review
conversations are resolved.
- Ten real-filesystem boundary cases and server typecheck pass locally
for the security fix. Coverage includes cache roots, descendants,
individual files, symlink aliases, recursive ancestors, a future
concurrent cache fill, and allowed sibling directories. [Current-head
private-project integration
tests](https://github.com/paperclipai/paperclip/actions/runs/40884087629/job/123483306405)
passed all 29 cases, including authorized and unauthorized imports of a
cached private package. Full typecheck, build, server suites, all eight
browser shards, and Runner checks passed in current-head CI. Local
database tests could not run because PostgreSQL could not initialize;
this limitation is recorded below.
- The earlier generated migration preserved the newest five snapshots.
The final integration renumbers its unchanged SQL to 0415. Migration
safety/numbering checks pass. Its SQL is byte-for-byte identical to the
previously verified idempotent skill migration; repeated application on
this latest schema was blocked by the same local database startup
failure.
- The broader verification before the final migration-only rebase passed
1,025 package, lifecycle, remote-launch, native-session, and
asset-retention tests, 52 focused UI tests, full workspace
typecheck/build, token gates, and map checks. The linked complete CI run
passed before the latest focused fixes.
- A disposable MinIO instance passed multipart upload, verified
read-back, and cold restoration of an 18 MB archive.
- Twenty warm samples with a synthetic 1,349-file, 22.8 MB repository
retained five metadata queries and zero object reads. Median preparation
was 256 ms for one selected skill and 691 ms for ten, with 5 ms emulated
network delay each way. These are local measurements, not production
latency guarantees.
- No production instance was changed. Earlier verification failures and
their disposition are retained below.

<details>
<summary>Earlier failures, review findings, fixes, and rerun
evidence</summary>

- The first CI pass found a stale inventory-span expectation and a
missing repository-read span. Both are fixed; all three observability
tests pass. One browser test copied page text into its YAML parser after
reload; its first unchanged-head retry passed, but the race recurred
after rebasing. The test now waits for the renamed URL and completed
reload before copying the editor, retaining its original assertions. The
earlier full local suite did not complete cleanly: it reported setup
timeouts and assertions, while isolated relevant reruns passed. The
complete current-head CI run closes that broad verification gap. No
production instance was changed.

- The first Apex review scored 2/5 and identified six issues. The fixes
protect authored history even when it shares an in-flight Git upload,
recheck upload expiry during orphan deletion, bound failed-upload
cleanup, retain per-version kind/encoding metadata, add sanitized
failure diagnostics, and correct the migration guide. The final focused
run passes all 140 tests; the preceding eight-file run passed all 149
tests, including local storage and S3 diagnostics. Server typecheck and
migration safety/numbering checks pass after the fixes. The second Apex
review scored 1/5 and found unbounded maintenance storage calls and
mismatched package/Git batch limits. Those are fixed with a 30-second
cancellable cleanup deadline, shared 100 MiB/10,000-file scanner and
storage limits, and bounded Git read batches. The proposed manual
lockfile edit was rejected with evidence of the enforced CI-owned
lockfile policy. All 19 storage/recovery unit tests and server
typechecking pass. The new database-backed cleanup/conversion tests were
locally skipped because the host exhausted its PostgreSQL semaphore
capacity (confirmed directly by initdb). That gap is closed by
current-head CI: [package-store
tests](https://github.com/paperclipai/paperclip/actions/runs/40771320775/job/123109300889)
pass all 18 cases and [package-worker
tests](https://github.com/paperclipai/paperclip/actions/runs/40771320775/job/123109301157)
pass all 7, with no skips in either suite. The corrected YAML browser
shard passes. A separate planning-fixture test failed its cleanup DELETE
with an activity-log foreign key violation after its behavior assertions
passed; its one unchanged-head retry passed. The third Apex review
scored 1/5 and identified a one-slot pool deadlock, projected path
limits, cleanup holding the preparation lock during archive reads, and a
publication/expiry race. These are fixed with transaction-local reads,
prefix-aware bounds, isolated verification, and shared package row locks
with a publication grace. The separate Paperclip review also found stale
historical inspection, eager history downloads, and conversion retries
blocking sleep. Those are fixed. Local PostgreSQL capacity recovered:
the new database regressions ran, including the one-slot fork, paused
storage during a warm turn, and a locked publication during expiry. The
expanded run passed 144/145 tests; its remaining assertion still
expected file bodies from the version list and was updated to fetch the
selected version. The corrected company-skill suite passes all 81 tests,
and the final package/projection run passes all 27. All 52 focused UI
tests pass after updating their query-provider fixtures; the first UI
run exposed a fixture remount, and the follow-up exposed an editing
syntax error, both corrected. Full workspace typecheck and build, token
gates, and map checks pass. The sandbox initially blocked the build
tool’s local IPC socket; the authorized build rerun passed. Master then
claimed migration 0401. The branch is rebased on f8226b0515, the
unchanged SQL is regenerated as 0402, and repeated application passed
twice on the combined schema. Post-rebase workspace typecheck passes.
All 1,025 package, lifecycle, remote-launch, native-session, and
asset-retention tests pass on the combined head. All CI checks passed
for head 9d80a3b52d. The fourth Apex review scored 3/5 and found a
save/edit lock-order cycle, a retry retaining an uncommitted source ID
in its recovery recipe, and a summary read racing conversion. Commit
b7d9237c6a fixes all three. The new concurrency and retry tests pass
within all 61 package/source tests, and server typecheck passes. Master
then claimed migration 0402. The branch is now rebased on 65fa1cd617 and
the unchanged SQL is regenerated as 0403. All 68 package, source, and
worker regressions, server typecheck, migration safety/numbering, and
repeated migration application pass on current head 62553671a0.
Subsequent verification and review outcomes are recorded below.


- The fifth Apex review scored 4/5 and found cached version reads
unnecessarily depending on object storage and conversion reads missing
the coordinator cancellation signal. Commit 1eb90d80be fixes both:
cached reads verify bytes without the preparation lock; manifest and
archive reads carry cancellation through conversion. The first focused
run passed 70/71 tests, including all three new cases, but the existing
diagnostic test observed no warning. Its fixture now sets an explicitly
expired migration deadline; the final worker suite passes all nine
cases. Server typecheck passes.


- The sixth Apex review scored 4/5 with one finding: concurrent cached
inventories were unbounded. Commit 4b7589e14c gives cached inventories
and previews a two-reader/32-waiter limit independent of cold storage.
The first expanded pressure test observed a third reader before the
preview path had the same bound; both paths now share the local limit.
All 73 focused cases pass, followed by all 29 package cases after the
final overload adjustment; server typecheck passes. The separate
Paperclip review found no must-fix or should-fix issues. Its optional
suggestion to persist durability verification was considered: cleanup
intentionally verifies current external bytes before discarding the last
local authored copy, and the missing-object regression requires that
check. Shared-package eviction happens on cold fills with at most two
attempts and a ten-second budget.


- The seventh Apex review reached 5/5 with one remaining P2:
timeout-bearing manifest reads bypassed request coalescing. The security
review also found repeated archive acquisition after a cold
administrative read. Commit 79a80a39d2 shares manifest loads with
per-caller cancellation and cancels the underlying work when the last
caller leaves; coalesces identical cold version/file requests; and
publishes verified restored packages into the shared cache. Publication
uses a short nonblocking lock, while eviction verification runs outside
it. The first expanded run passed 73/74 tests and exposed a missing
originating DB for cache publication inside read-only inspection;
transaction readers now pass that owner explicitly, keeping metadata on
the transaction. The corrected run passed 75/75. A final eviction test
initially expected the shared package to remain after only its separate
runtime projection was reused; it now explicitly accesses the shared
package during verification. All 32 final package tests pass, including
independent caller cancellation, one acquisition across
concurrent/repeated reads, and warm preparation during stalled eviction
verification. Server typecheck passes.


- The eighth Apex review scored 4/5 with one finding: decoded cold
inventories outlived the storage semaphore while waiting for cleanup.
Commit 9d7921d1ec adds a separate two-response/32-waiter lifetime bound
held through cleanup, preserving the independent warm-read queue and
forwarding cancellation through eviction verification. The new
regression pauses cleanup after two responses decode, verifies a third
archive stays queued, and completes warm preparation before releasing
cleanup. All 77 package/source/worker cases and server typecheck pass.
On the preceding head, serialized server shard 6/9 was interrupted with
“The operation was canceled” after 57 seconds of tests; the log contains
no failing assertion. Fresh latest-head CI reruns that shard along with
the other gates.

- The ninth Apex review scored 4/5 with one P1: cold responses could own
both permits while waiting on a one-slot ordinary database pool held by
a queued transaction reader. Commit a94f0e409f reads caller-scoped
metadata before admission and isolates all acquisition/cleanup SQL on a
private connection. The new real-PostgreSQL regression reproduces the
deadlock against the previous head and passes with the fix; all 78
focused cases and server typecheck pass. The previous CI run completed
with 54 successful checks, including both formerly interrupted/stuck
serialized shards.

- The tenth Apex review scored 4/5 with one P1: preloading legacy bodies
before admission could retain many full repositories in queued requests.
Commit 276e353a37 removes that preload and also bounds legacy manifest
derivation/fallback, using private connections inside the I/O slot. All
80 focused tests pass; the final synchronized package suite passes all
36 tests and server typecheck passes.

- Apex review 11 returned 5/5 with zero comments on 276e353a37. While it
ran, master 8bc051245f added migration 0403, creating a metadata
conflict. Merge commit e1783764d9 integrates master and generates
0404_clumsy_leo.sql; its skill SQL is byte-for-byte identical to the
previously verified migration. The combined schema passes migration
safety/numbering, repeated SQL application twice, all 80 focused
PostgreSQL tests, full workspace typecheck, and full build. The
preceding a94f0e409f CI run was superseded and cancelled while its final
runner job was active; no old-head success is claimed for that run.

- Final acceptance: Apex review 12 returned 5/5 with zero comments on
e1783764d9. All 28 review threads are resolved. The final head has 55
successful checks, two neutral reports, two skipped checks, and no
pending or failing checks; the PR workflow completed successfully.
Superseded run 40789121902 was cancelled to free its workflow slot for
the final head; normal cancellation did not finish promptly, so force
cancellation completed it.

- October 29 conflict resolution (867c00673b): master 929e840595 added
installed-selection reuse and bundled relocation, routine cleanup
notifications, a hardened YAML copy helper, and migrations through 0413.
The merge retains those behaviors together with package read scoping and
the public-selection fast path; restricted selections still reauthorize
and the full row read rechecks scope. Generated migration 0414 retains
the existing SQL unchanged. Workspace typecheck/build and migration
checks pass. Local database verification is unavailable: initdb reports
semget / “could not create semaphores: No space left on device”; all 168
cases skipped, and repeated migration application failed at startup.
Docker returned HTTP 500 during container creation, so no Docker test
pass is claimed. Current-head CI must close this gap.

- Apex review 14 scored 3/5 with one P1: a local import could copy
cached private package files into a company-wide skill. Commit
a2e597d800 rejects cache trees and ancestors through a canonical
filesystem boundary, including aliases and ancestors checked before a
concurrent fill. Ten local filesystem tests and server typecheck pass.
The existing private-project integration case now rejects package-cache
imports for both authorized and unauthorized users. The preceding merge
commit’s complete CI run passed, and logs confirm all 168 locally
skipped cases executed successfully: package store 36, sources 35,
package worker 9, runtime selection 4, observability 3, authoring 81.

- Apex review 15 returned 5/5 with zero new findings on a2e597d800. The
separate Paperclip review found no must-fix or should-fix issues. Its
optional suggestions were considered: unexpected filesystem cleanup
failures remain visible, the durable marker cannot replace checking that
bytes still exist before deleting a last local authored copy, and
administrative history batching remains outside the pre-turn
optimization. The cache-path literal centralization suggestion is also
optional; the current producer and guard use the same directory, covered
by the new integration regression. All review conversations are
resolved.

- Earlier October 29 CI/Apex acceptance: a2e597d800 was mergeable at
that check, Apex review 15 passed 5/5 with zero findings, and all review
conversations were resolved. The hosted verification above records the
later acceptance limits and renewed conflicts. Workflow 40884087629
completed successfully, with 55 successful checks, two neutral reports,
two skips, and no pending or failed checks. The project-skill-sources
job log confirms all 29 cases ran and passed, closing the latest
integration gap. The preceding merge workflow also confirmed all 168
focused database cases ran and passed. No local PostgreSQL or Docker
pass is claimed.

</details>

## Risks

- First use after eviction can require storage or Git access. Revoked
grants, removed sources, and unreachable commits can prevent
reconstruction. Recovery never substitutes a newer commit.
- Historical packages without a proven recipe keep durable bytes.
Cleanup favors retention when a run pin cannot be interpreted safely.
- New uploads and conversion use bounded work and persisted retries.
Large initial conversions still add temporary storage and database load.
- Optional cleanup can wait until the next server wake. Supported
notifications assume one owning server process.
- Per-entrypoint native tree duplication and cold preparation cost
remain. The final ten-skill cold sample took 47.6 seconds on the shared
host.
- Generic authored edits can still hold an existing edit transaction
while a package uploads.
- Explicit file/folder deletion uses temporary disk space for rollback.
An uncertain commit with a changed skill or unavailable database retains
that backup and logs its location for recovery.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, repository tools, code
execution, and tests. The exact served model ID and context window are
not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 12:19:37 -05:00
DottaandPaperclip 6a932bb979 fix(daytona): preserve workspace exports under disk pressure (#18172)
## Thinking Path

> - Paperclip manages AI agents and preserves their work when execution
stops.
> - Remote workspace recovery must save the retained files before
another executor can start.
> - Daytona directory export first writes a complete tar on the source
sandbox.
> - When that disk is full, each preservation retry fails while writing
the same temporary archive.
> - This change streams an archive after a storage-capacity failure,
without another full copy on the sandbox.
> - Existing source ownership, archive validation, and task admission
gates remain in force.

## Linked Issues or Issue Description

Related: #14402 established safe workspace export and retained-source
recovery. This PR handles the remaining temporary-archive storage
requirement.

**What happened?**
A sandbox ran out of disk space. The provider could no longer save its
state, and workspace preservation then failed with tar `No space left on
device` or `Wrote only ... bytes`. Repeating the export could not
resolve that failure because it required free space on the same disk.

**Expected behavior**
Export retained files without needing a second full copy on the source
disk. Reject incomplete transfers and unsafe archives. Preserve the
source and newer host files if export fails.

**Steps to reproduce**
Run the capacity regression with real tar and a file-size limit. The
original export fails during archive creation. The fixed export
transfers the same bytes through a real PTY. The credential-gated live
test uses a real Daytona sandbox and `/dev/full` as the archive sink to
reproduce ENOSPC without filling a provider disk.

**Paperclip version or commit**
Reproduced on `27be859044`; fix rebased onto `6d59f5ef7e`.

**Deployment mode**
Source checkout on macOS arm64; live provider verification on a
disposable Ubuntu 24.04 Daytona sandbox with SDK 0.203.0.

## What Changed

- Fall back only after archive storage-capacity errors. Keep the
ordinary bulk download path.
- Transfer 40 KiB archive chunks over a raw PTY. Wait for each host
write acknowledgement and a final receipt acknowledgement. Send long
scripts only after raw-mode readiness.
- Require successful tar exit and complete framing before the existing
host archive validator can import files. Keep the bounded safe-link
retry and exclude rules.
- Bound total archive bytes by the provider-reported disk allocation,
preserve a 1 GiB host free-space reserve, and bound terminal cleanup to
five seconds while closing the host file independently.
- Add real-tar/PTY regressions, stream failure tests, a credential-gated
provider test, and recovery documentation.

## Verification

- Red before production changes: the capacity regression failed on the
real tar write with exit 153. Green afterward: unchanged bytes, file
mode, confined links, and source files survive. A tar producer that
fails after sending bytes cannot overwrite newer host files.
- 43 focused tests pass. Missing receipts, nonzero exits, transport
loss, invalid base64, oversized frames, stalled transfers, and late
connection cleanup fail closed.
- Live Daytona test passes: stop/start, actual tar ENOSPC, matching file
hashes and modes, unsafe-link filtering, intact source, then another
stop/start and export with a later saved file. The disposable sandbox
was deleted. Initial default-sandbox creation hit account quota; the
successful test used a 1 GiB image. Large output bursts exposed a real
socket closure, corrected by bounded chunks and verified in the
successful run.
- Repository `pnpm -r typecheck` and `pnpm build` pass. `node
scripts/check-maps.mjs` passes. Standalone plugin typecheck passes.
- Standalone plugin build and final typecheck pass. The final broad
plugin run passed 482 tests, skipped seven credential-gated cases, and
hit one existing 30-second archive-listing timeout. Earlier runs hit
both large-listing cases. Both timeouts reproduce with unchanged
`file-sync.ts` from master `6d59f5ef7e`, with 22 other archive-listing
cases passing on both base and fixed source. Parallel, serial, and
GNU-tar local runs retain those timeouts. The serial local `pnpm
test:run` was stopped after 36 minutes once the complete current-head CI
test suite passed; it is not counted as a full local pass. GitHub
Actions on production-code head
`9ffbd9e56e283a01c22f005c022b8f6838cf0143` passed typecheck, all general
and serialized test shards, Runner verification, build, E2E, and canary
dry run.
- Review fixes have passed the live Daytona test again. Sparse-file
budget enforcement, rejection before host writes, low host reserve, and
stalled provider cleanup are covered by the 43 focused tests. Greptile
is 5/5 and security scanning passes on
`9ffbd9e56e283a01c22f005c022b8f6838cf0143`; both review threads are
resolved.
- Test portability: `d2280108f5` verifies GNU tool versions and Python
before running the real-PTY regression. All 43 focused tests pass with
prerequisites installed; restricting PATH to the macOS system tools
cleanly skips the three integration cases. Standalone plugin typecheck
passes. Current-head CI passes typecheck, build, all test shards, Runner
verification, E2E, and canary dry run:
https://github.com/paperclipai/paperclip/actions/runs/40910736373.
Greptile and Paperclip Review both assess the final head 5/5, security
checks pass, and no review threads remain unresolved.
- Paperclip Review assessed the final head 5/5 with no actionable
defects after the test-portability fix. Remaining accepted tradeoffs are
recorded under Risks.
- This is live provider-boundary acceptance. It does not prove a full
task Retry journey, repair lost provider session state, or recover the
original deployed task.

## Risks

- Streaming requires Bash and GNU tar, dd, and base64. Missing tools or
transfer failure reject export and retain the recovery obligation.
- Acknowledged terminal transfer is slower than bulk download,
especially across high-latency links. Very large exports can still reach
the configured deadline. The ordinary bulk path is unchanged.
- The fallback checks host free space before every 40 KiB write; this
deliberately favors a strict reserve check over reducing local syscalls.
It carries archive-download error context but does not yet emit a
dedicated transfer span. Provider cleanup is bounded; a kernel-stalled
local filesystem operation can still delay completion and file close.
- This change does not increase sandbox capacity or reconstruct provider
state that failed to persist. The plugin must reach the target
installation before recovery can use it. No merge, deployment, or
original-task replay is included.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, repository inspection, code
editing, shell execution, and automated testing. The exact serving
variant and context-window size are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 11:41:01 -05:00
Nicky LeachandPaperclip 247de89eae fix(runner): preserve warm tasks during recovery (#18169)
## Thinking Path

> - Paperclip manages agent work and the lifetime of its execution
resources.
> - A warm native task can keep one Runner alive between successful
turns.
> - Foreground completion selects whether that resource stays running or
stops.
> - Background recovery must use the same selected policy.
> - Recovery currently reads that policy only from workspace copy-back
records.
> - A task without such a record can be stopped immediately after
foreground retention.
> - This pull request saves the resource policy with the native runtime
and permits the retained task to refresh its control connection.

## Linked Issues or Issue Description

**What happened?**

Background native finalization can stop a successful warm Runner when
its run has no Core workspace-sync record. Foreground completion retains
that same task. The stopped Runner cannot receive the later drain and
suspend commands. Cold resume then correctly rejects its unproven
checkpoint.

Hosted diagnostics confirmed the recovery reconciler attempted
environment release immediately after foreground retention. The provider
connection returned HTTP 404 within the same second. A database-backed
regression reproduced the stop without a workspace-sync record.

A separate authorization gap also prevents the current retained task
from refreshing its connection endpoint after the run succeeds.

**Expected behavior**

Foreground completion and recovery must use the selected resource
policy. A successful warm task stays running until its idle shutdown can
suspend it. Failed or cancelled work still stops. The current retained
task can refresh its existing control route, but cannot prepare or
submit new execution.

**Steps to reproduce**

1. Select a warm native runtime on a reusable remote execution
environment.
2. Complete a turn without a Core workspace-sync record.
3. Let native finalization recovery settle the still-active run lease
before foreground retention finishes.
4. Before this change, recovery defaults to `stop_and_retain` and
invokes the provider stop path.
5. Separately, request the retained task's connection endpoint after
successful completion. Before this change, Core rejects that request.

**Paperclip version/commit**

The hosted failure used Core 31b927e301.
Regressions also reproduced on master at 6d59f5ef7.

**Deployment mode**

A remote native execution environment with reusable warm tasks. The
resource policy is generic and applies across harnesses and providers.

Related recovery coverage: Refs #18161. This change preserves the
suspended-checkpoint admission guard. Existing tasks without the newly
saved policy retain the previous conservative fallback; deployments must
drain or recover them explicitly.

## What Changed

- Save the selected native resource disposition in the existing
runtime-selection transaction. Add no startup database round trip or
network request.
- Read this small policy in background settlement and recovery when no
workspace-sync record exists. Preserve valid workspace-sync policies and
export-retry behavior.
- Keep failed and cancelled runs out of warm retention.
- Permit connection refresh for a successful, dispatched warm task on
its current retained reusable lease. Keep retirement, termination,
expiry, saved-run identity, and plugin capability checks.
- Add database-backed retention and selection regressions,
failure/cancellation coverage, and bounded projection checks. Document
the lifecycle and access contracts.

## Verification

- Before the source edits, the no-workspace-sync regression invoked the
driver with `stop_and_retain` instead of retaining the lease. Both
runtime-selection cases failed because the resource policy was absent.
- After the source edits, those regressions and both
run-state/runtime-selection files passed. The three-file run had 77
passes and two new fixture expectation failures. Those fixtures were
corrected. Final-head GitHub CI passed, including the server suites,
Runner checks, typecheck, build, and E2E gates. The local rerun was
deferred at the user's request.
- Commands: `node_modules/.bin/vitest run
server/src/__tests__/native-environment-settlement-work.test.ts
server/src/services/heartbeat/runtime-selection.test.ts
server/src/services/heartbeat/run-state.test.ts`.
- The connection authorization regression failed before its edit. All 34
tests in `server/src/__tests__/environment-task-runtime.test.ts` then
passed.
- `node scripts/check-maps.mjs` and `git diff --check` passed.
- No comprehensive local suite was run. Further local tests and VM
reproductions were stopped at the user's request to conserve battery and
mobile data. GitHub CI verifies the final head.
- Hosted verification of this patch requires deployment after merge.
Passing pre-patch retries did not establish repair of the original
failure.

- Standard Greptile and the subsequent requested Apex review both
returned **5/5** on `360bcd7e789d65950c27484af237faec02553666`, with no
inline findings.

## Risks

- This adds one server-owned field to the existing run profile JSON; no
migration is required. Invalid or absent policy keeps the previous
conservative fallback.
- Valid workspace-sync disposition remains authoritative. Pending export
and failed finalization still use stop-and-retain safety behavior.
- Retained connection access requires a successful run, matching saved
run identity, dispatched warm task, unexpired reusable lease, and no
retirement or termination. Superseded leases and new execution remain
denied.
- The cold-resume checkpoint proof is unchanged. This patch does not
make the already-stopped task's unsuspended checkpoint resumable.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, tool use, and code
execution. The host does not expose a more specific serving model ID or
context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run targeted local checks; final verification passed in
GitHub CI (local rerun deferred at the user's request)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 09:19:49 -07:00
DottaandPaperclip 6f278dd6d7 fix(runtime): settle recovery lease and connection lifecycles (#18167)
## Thinking Path

> - Paperclip manages AI agents and their work.
> - A remote runner can survive a controller restart.
> - Recovery renews its execution lease during slow preparation.
> - The native executor then shares that renewal timer.
> - Preparation kept its reference until all finalization finished. A
tick after lease release treated completion as ownership loss and
detached the retained runner.
> - A Linux continuity test also found that buffered wire events could
arrive before their connection was registered. Cleanup then kept a
completed promise under an undefined key and never finished.
> - This pull request transfers renewal ownership after execution
acquires its reference. It also registers each connection before wire
callbacks can run.
> - Recovered turns can complete, retain the warm runner, and settle
connection cleanup.

## Linked Issues or Issue Description

**What happened?**

A recovered remote run could complete, release its coordinator lease,
then detach during instruction collection. The next turn could find the
old runner still using the ingress port. Recovery then stopped because
it could not prove process ownership.

**Expected behavior**

Preparation keeps the lease alive until execution owns renewal.
Execution stops renewal before releasing the lease. Actual ownership
loss still detaches the runner. Buffered wire callbacks must use the
registered connection, and cleanup must finish.

**Steps to reproduce**

1. Recover an in-flight remote runner after a controller restart.
2. Let the recovered turn complete.
3. Hold instruction collection open through the next lease renewal tick.
4. Send a follow-up that needs the retained runner.

Related: #17439 introduced remote controller recovery. #18011 preserves
checkpoint authority through warm preparation. This change fixes the
lifetime of preparation's renewal reference.

## What Changed

- Pass an internal lease-acquired callback from recovery through
heartbeat dispatch.
- Release preparation's renewal reference after the executor registers
its own. Keep final cleanup for exits before dispatch.
- Add a PostgreSQL regression for completion while finalization is still
pending. Cover callback forwarding, acquire-before-release ordering, and
failure before dispatch.
- Register the authority connection before subscribing to wire events.
Handle an immediate close before accepting buffered data.
- Add regressions for a message or close delivered during subscription.
- Extend Linux continuity coverage with preparation renewal and delayed
instruction collection after recovery.
- Update the continuity guide and session verification recipes.

## Verification

- The new recovery regression failed before the fix because renewal
detached the runner after lease release. The 76 recovery, renewal, and
dispatch tests then passed. The final ordering and early-exit checks
passed again after replacing fixed sleeps with controlled interval
ticks.
- Both buffered-wire regressions failed before the connection fix. All
170 control-plane tests passed afterward. Existing tests cover stale
authority, ownership loss, pending operations, and closed ingress.
- Linux ARM64 acceptance passed at
`a7daefacceb8bd994d0b79d284cdf54f3e3829d1`, with Node 24.19.0,
PostgreSQL, the real Rust runner, TLS ingress, and a deterministic Codex
protocol fixture. The test interrupted the first turn, recovered it,
held finalization open for a renewal interval, and completed two
follow-ups. It retained one provider process, three turns in one
history, and the same runner identity. Final suspension and connection
cleanup completed. The ordinary warm-reuse case also passed three turns
with one provider process.
- Earlier Linux attempts completed the turns but hung during cleanup. A
debugger found a fulfilled promise keyed by an undefined connection. The
regression reproduces that defect. One later setup attempt timed out
while staging an unstripped 373 MB debug binary. The passing run used
the same binary with debug symbols removed.
- Reproduce Linux acceptance with the `same-server` case in
`doc/testing-native-remote-continuity.md`.
- `pnpm -r typecheck`, `pnpm build`, map validation, and `git diff
--check` passed at the final revision. The full local `pnpm test:run`
command was attempted, but the serial run had not finished after 13
minutes. It was stopped after the equivalent CI lanes passed. It is not
counted as a full local pass.
- Greptile and the Paperclip review both scored the final revision 5/5
with no findings. All Runner verification lanes passed. The first CI
attempt hit timing failures in voice recovery, agent YAML configuration,
and the task-title outage browser test. The full YAML and voice-recovery
files passed locally (88 and 19 tests). These paths were unchanged and
passed on the prior revision. All three passed on the single retry.
Final current-head status: 55 successful checks, one neutral check, and
two skipped Storybook checks. No pending or failed checks remain.
- Live Daytona/model acceptance and recovery of the hosted task remain
unverified. This PR does not deploy the change.

## Risks

- Releasing preparation before execution starts renewal could leave a
gap in authority. The callback runs after the executor registers its
reference.
- Preparation errors must not leak renewal. The recovery promise retains
idempotent final cleanup.
- Wire callbacks can run during subscription. Message and close
regressions check that registration is complete before either callback
runs.
- No schema, API, model, permission, lease duration, or retry policy
changes.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, repository tools, code
execution, and browser diagnostics. The exact serving model identifier
and context window are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 11:18:53 -05:00
DottaandPaperclip cc6a3296e5 fix: keep agent YAML compact and preserve omitted settings (#18168)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The Advanced tab lets operators edit agent settings as YAML.
> - Its first format embedded company catalogs, profile definitions,
history, and instruction text.
> - This made one agent document grow with unrelated company data.
> - Removing those fields from the display also needs safe save
behavior.
> - This pull request renders a compact document and resolves sparse
edits against saved state.
> - Operators can change settings without copying shared data or
deleting hidden values.

## Linked Issues or Issue Description

Refs #2219. Follow-up to #18036.

**Current behavior**

The Advanced document expands shared profiles, embeds instruction files,
and lists read-only state and unused connections. It also emits empty
command lists and unset fields.

**Proposed behavior**

Show the agent's own settings and profile/instruction references.
Omitted settings stay unchanged. Explicit empty values clear supported
settings. A named instruction file changes only when supplied; `null`
deletes that file.

**Reason and benefit**

An agent's YAML should remain readable when its company adds profiles or
its instruction files grow. Every setting remains available through YAML
or its owning settings tab.

## What Changed

- Remove the read-only `observed` export and unused connection
inventory.
- Render profile-key references and instruction locations. Keep file
contents and legacy prompt text out of the default editor.
- Omit unset nullable fields, empty maps/lists, zero budget, standard
permissions, and empty commands.
- Add a sparse input schema and saved-state resolution. Preserve omitted
fields, binding definitions, file contents, permissions, and channel
settings.
- Keep explicit clears and map/list replacement. Patch named instruction
files and use `null` for deletion. Preserve hidden legacy prompt text
unless explicitly changed.
- Check profile references, shared edits, and file restrictions before
writes. Keep revision guards, native authorization, and partial-save
recovery.
- Update documentation, verification maps, and regression coverage.
Remove operating-system clipboard dependence from browser tests.

## Verification

- All 48 jobs pass in the [final CI
run](https://github.com/paperclipai/paperclip/actions/runs/40904124001)
on `6dbb11d7a6`. Greptile is 5/5 on this exact commit. Both findings are
resolved; there are no failed or pending checks.
- Paperclip Review ended neutral because its agent finished without a
complete assessment. It did not provide a code finding. Superagent
Security Scan passed.
- The focused suite passes 58 tests across YAML parsing,
planning/saving, compact output, and the editor.
- A large unit fixture with 30 profiles, 50 entries per profile, and a
1,000-line instruction file renders under 70 lines and is more than 95%
smaller than the prior expanded representation.
- All eight browser cases pass against real APIs and a dedicated
PostgreSQL database. The compact-output case stays under 60 lines with
large profiles and instruction text. It checks sparse saves and
profile-key binding without changing shared definitions. The
resource-save browser case also checks that unpinned skill shorthand
does not trigger another sync during an unrelated save.
- Browser coverage also checks resource saves/clears, secret redaction,
key receipts through rename, stale drafts, lost responses, instruction
relocation, and revision restore. The MCP fixture is a local target; no
model run or external provider login is claimed.
- Workspace build and typecheck pass. Map, Storybook catalog, and token
gates pass. These checks and all eight browser cases passed after rebase
onto current master, including its new Secrets regression. The merge
conflict consisted of adjacent test additions; both were retained. The
final skill no-op correction also passes a focused browser rerun. The
mixed-resource channel regression failed before its fix and now passes,
including revision restore with unpinned skills. UI typecheck passes
after both corrections.
- The first browser run hit a five-second test wait during an active
multi-resource save. A focused rerun exposed shared clipboard
interference. The helper now waits for save completion and uses scoped
copy events plus keyboard input. The next full run passed. Earlier logs
and screenshots remain outside the repository.

Run the focused browser suite with:

```sh
pnpm exec playwright test --config tests/e2e/playwright.config.ts tests/e2e/agent-configuration.spec.ts
```

## Risks

- Omitted fields now preserve saved values. Removing a line does not
clear that setting. Supply its supported empty value instead.
- Instruction file maps are patches. Old exports that removed a file by
dropping its entry must now set that file to `null`. Entry files and
read-only assets remain protected.
- Explicit lists and adapter/runtime/metadata maps retain replacement
behavior. Hidden legacy prompt text is preserved unless supplied
explicitly; an empty string clears it.
- Shared definition edits still require explicit consent. Saves still
use sequential native APIs and can partially succeed. Existing
unversioned resource race windows remain.
- No database migration, new dependency, lockfile edit, or workflow
change.

## Model Used

OpenAI Codex, GPT-6 family. The exact serving model ID and context
window are not exposed in this session. The work used reasoning,
repository editing, code execution, and Playwright browser automation.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 11:17:17 -05:00
DottaandPaperclip c32e1ba6da fix(onboarding): keep approved child task handoffs runnable (#18160)
## Thinking Path

> - Paperclip manages work through tasks, agent runs, dependencies, and
human decisions.
> - The first-task workflow asks for approval before it creates an
execution task.
> - File-producing work must run on a child task before onboarding can
finish.
> - A child blocked by its onboarding source cannot start while the
source waits for that child.
> - This change rejects that dependency during task creation and later
edits, and gives the agent a correction.
> - The shipped recipe shows the dependency direction and requires the
actual approved inputs in the child instructions.

## Linked Issues or Issue Description

**What happened?**

After human approval, an onboarding run could create a child with the
onboarding source in `blockedByTaskIds`. Creation saved a blocked child
with no wake. The parent could then wait for that child. A handoff could
also refer to input from the parent conversation without including the
input in the child description.

**Expected behavior**

The approved child can execute before its waiting parent. Invalid
first-task dependency input fails before task creation and leaves the
same command key available for a corrected call. The child instructions
include the required approved input and constraints.

**Steps to reproduce**

1. Accept a proposal on a server-created first task.
2. Call native `create_task` with `status: "todo"` and the onboarding
source in `blockedByTaskIds`.
3. Observe a blocked child with no scheduled wake. Block the parent on
that child to expose the stalled handoff.

**Paperclip version or commit**

The regression reproduces on `f8484a9f8d1f68e9534fee4f29e00e716dc680f4`.
The repair is based on current master.

**Deployment mode**

Core native and REST task creation. The same server boundary serves
self-hosted and hosted instances.

Related: #18080 fixed remote delivery of the selected first-task skill.
This change handles the later child handoff boundary.

## What Changed

- Reject a task blocked by its authenticated first-task source during
creation and later dependency edits. Later agent edits also check the
locked target's server-owned onboarding parent, protecting a child
running under its own execution. Compare UUID identity in PostgreSQL so
alternate supported UUID spellings cannot bypass the check. The error
explains the correction.
- Add a native child/dependency recipe with self-contained approved
input guidance. Clarify the general `create_task` input descriptions and
update their generated contracts.
- Cover native and REST rejection, corrected retry, preserved valid
dependencies and replay, and an executable recipe with exact input bytes
read from the child's own context. Thread the authenticated run through
native dependency edits. Keep blocker corrections independent of a new
proposal decision.
- Update execution semantics and the existing onboarding map entries.

## Verification

- Red on `f8484a9f`: the new native regression received a created
blocked child instead of the expected rejection.
- Review regressions were red on the original PR head: uppercase,
unhyphenated and braced source UUIDs created blocked children; a later
child PATCH returned 200 and saved the reversed blocker.
- Review follow-up reproduced both native and REST child-own-run
bypasses on `75fa75a6`: the native dependency call applied the reverse
edge; the child's own PATCH returned 200. The regression uses the actual
authenticated child execution and an already checked-out task.
- All 95 tests across first-task admission, assets, and the full native
tool-authority suite pass. The shipped recipe is validated against the
native schemas and exercised through real task/dependency services with
disposable PostgreSQL. Rejected PATCH tests preserve existing
authorization and attempt-audit behavior and require no requested
task-field, relation or wake change. Compatibility controls retain
ordinary manual parent blockers, explicit board edits, other blockers
and empty-list corrections.
- Runner TypeScript build, generated contracts, capability inventory,
protocol manifest, and map checks passed.
- Server typecheck and all 95 focused tests pass with the child-run
follow-up. All latest checks pass on `f24509ae`: 55 successful checks,
one neutral review check, four skipped checks, and a successful legacy
security status. Both automated reviews are 5/5 on this exact commit.
- Prior-head CI failures are preserved: the Runner close fixture had
unconfirmed provider drain while suspension succeeded; its exact
fake-provider subprocess row passed locally with unchanged sources. The
browser outage test lost its title textarea before any outage write. A
bounded local control with a fully loaded composer passed every original
outage assertion. The prior failure is an editor-readiness race; its
exact asynchronous ordering remains unproved. No UI, browser-test, or
timeout change is included. Neither failure is counted as a pass or
silently discarded.
- The first `f24509ae` CI attempt had two interrupted jobs: Typecheck
and General server 9/12. Their logs record runner shutdown signals. The
server job also records lost runner communication. The same-head
failed-job rerun passed both jobs and the required aggregate. It reused
the other successful results. No source, test, or timeout change was
made for the rerun. The failed attempt remains preserved. Full
repository checks pass in CI; the local full repository typecheck, test,
and build commands were not repeated.
- No external model or provider calls are used by these checks.
Real-provider acceptance at this revision remains separate.

## Risks

- The new rejection uses the authenticated run and the server-owned
onboarding origin. Ordinary tasks, other blockers, empty-list
corrections, and already committed creation replay retain their existing
behavior. Blocker edits do not reapply the creation approval gate.
- Nonempty blocker edits perform two indexed identity reads; the task
lookup covers at most the run source and locked structural parent. Other
patches and empty-list corrections add no source lookup. The update
guard adds no parent row lock behind a child. Existing REST
authorization checkout and attempt auditing remain in place before the
domain mutation guard.
- The explicit input recipe guides the model. Schema and persistence
tests do not prove that a future model follows every instruction.
- The tool guidance changes the generated semantic catalog identity. The
maintained generated files are synchronized in this change.

## Model Used

OpenAI `gpt-6.1-sol` through Codex, with `ultra` reasoning effort,
repository tools, code generation, and test execution. The context
window is not exposed by the runtime.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used and stated the available runtime
detail
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have described the issue in-PR following the bug issue template
- [x] I have not referenced internal or instance-local Paperclip issues
or links
- [x] My branch name describes the change and contains no internal
ticket ID
- [x] I have run focused tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 10:57:31 -05:00
Devin FoleyandPaperclip fd98075a22 fix(ui): show environment variables on agent Secrets pages (#18121)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Operators inspect agent configuration to understand which
credentials an agent can use.
> - Agent environment bindings can contain inline values, company secret
references, and user secret references.
> - The Secrets page did not mount the environment editor. Inline
credentials were absent, and its empty message said no secrets were
bound.
> - The existing environment editor already handles these binding types
and redacted values.
> - This PR mounts that editor on the Secrets page in both UI layouts
and clarifies the empty reference message.
> - Operators can inspect and edit the configured bindings. Values
remain masked, and the Runtime editor remains available.

## Linked Issues or Issue Description

**What happened?**

An agent can receive an inline credential through its environment while
its Secrets page shows no matching entry. That page only rendered the
secret-reference overview and API access controls.

**Expected behavior**

The agent Secrets page shows existing environment bindings as well as
secret references. Saved inline values stay redacted. Saving another
binding preserves existing credentials.

**Steps to reproduce**

1. Save an agent with an inline environment credential.
2. Open the agent Secrets page.
3. The credential row is missing, although the runtime configuration
contains it.

**Paperclip version or commit**

Reproduced on master `27270e9bf8b7a294cf03f8b84f4857f1b1ff05c7` before
the fix.

Related: [#12517](https://github.com/paperclipai/paperclip/pull/12517)
proposes changes to secret assignment controls. This PR covers display
of existing inline environment bindings through the current editor.

## What Changed

- Show the environment editor on agent Secrets pages in both UI layouts.
Keep the Runtime editor available.
- Change the empty overview message to describe missing company secret
references. Personal references remain visible in the environment
editor.
- Add native and legacy agent regressions through the actual page
components.
- Add a browser check for masked values, secret references, save/reload,
and exact credential preservation through an opaque configuration
revision.
- Update the feature and agent access maps for the existing UI entry
point.

## Verification

- Red before the fix: the native and legacy page regressions could not
find the saved environment credential row.
- The focused UI suites pass: 207 tests, including all four
layout/adapter page cases.
- The server redaction and configuration revision suites pass: 42 tests.
Native Runner environment assembly suites pass: 40 tests.
- An isolated Chromium flow passes against the real local API and
database. It checks a masked inline value, a company secret reference,
and save/reload of an added variable. It then removes the new variable
and checks that the opaque server revision matches its original value.
This proves that the hidden credentials survive both saves without
reading them. The initial browser attempt exposed a fixture ordering
assumption; the test now compares variable-name sets because PostgreSQL
JSONB does not retain insertion order.
- `pnpm -r typecheck`, `pnpm build`, `pnpm check:token-gates`, and `node
scripts/check-maps.mjs` pass.
- The full local `pnpm test:run` attempt found three failures in
unchanged server fixtures. The chat-recovery case passes in isolation
and in its 22-test group. The two workspace cases inherit
`init.defaultBranch=main`; all 179 workspace tests pass when the child
process uses `init.defaultBranch=master`, as the fixtures expect. The
long local invocation was then stopped. Later local groups were not
reached. All corresponding CI test shards pass.
- [CI passes on the final
commit](https://github.com/paperclipai/paperclip/actions/runs/40809064907).
The first canary dry run found an npm version collision. Its single
retry passed without a source change.
- Apex passes at 5/5 on the current commit with no unresolved findings.

## Risks

Low risk. The change reuses the existing editor and save path. No API,
secret delivery, permission, or database contract changes. The tests
cover masked values and existing references during save/reload.

## Model Used

OpenAI GPT-6 through Codex, with tool use and code execution. The
session does not expose a more specific model ID or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass — scoped checks pass; the
full local command limits are recorded above
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 08:32:30 -07:00
DottaandPaperclip 7e27bc5007 fix(tasks): keep anchored opens compact and stabilize saved cards (#18092)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Task pages must make the current instruction and recent conversation
readable quickly.
> - Compact startup avoids reading all earlier messages and run
activity.
> - Every URL fragment previously selected the full-history path, even
for documents.
> - Saved document cards also arrived after the conversation was
visible. PR statistics could add another row later.
> - This pull request keeps anchors compact and reveals the saved
conversation structure together.
> - The benefit is stable reading position without loading unrelated
history.

## Linked Issues or Issue Description

Related: #17593 introduced compact startup. #14667 covers earlier reveal
and scroll work. This fix retains the bounded history contract.

**What happened?**

Opening a task document link loaded all task history. Ordinary cold
opens could reveal messages before saved document cards and plans
arrived. Later PR metadata added a statistics row and changed card
height.

**Expected behavior**

Every URL fragment keeps compact startup. Document links open their
pane. Older-comment links fetch only the target comment. Saved cards
keep their geometry after first reveal.

**Steps to reproduce**

1. Create a task with many comments, a saved plan, documents and saved
PR work products.
2. Delay the enriched task response and open the task. Observe cards
inserted after messages appear.
3. Open a document fragment. Observe full comment, activity and run
reads.
4. Delay PR metadata refresh. Observe each card grow when diff counts
arrive.

## What Changed

- Remove fragment and tab checks from automatic history expansion.
Resolve validated comment UUIDs through the authorized single-comment
endpoint, encode their path components, retain fetched targets across
document navigation, and preserve cancellation/deletion cache updates.
- Include the saved plan, document metadata and local work-product
projection in the core task read. Skip recovery, workspace and
related-task enrichment. Do not refresh providers. Summary queries no
longer select other document bodies.
- Seed saved work-product and plan queries from core, including already
pending or errored reads, without replacing known lists or an
authoritative empty result. Coordinate the bounded recent reads, saved
cards, latest transcript and settled initial pane width before first
reveal. Keep the thread and composer mounted during refresh and explicit
expansion.
- Open continuation summaries in the document pane. Reserve PR
statistics geometry while provider metadata loads.
- Add a reusable synthetic local task, nine browser checks, frame
measurements and video. Extend the PostgreSQL core-route fixture with a
saved PR row and assert its identity, URL, state and stored metadata
survive the response. Update design guidance and capability maps.

## Verification

- Red: visible document/plan cards changed from 0 to 1 to 4; thread
height grew from 690 to 1,432 pixels. Green: all seven saved cards
appear before reveal, with constant thread height and zero per-card
movement in the final reviewed browser run. The final 1,492-pixel layout
includes the reserved PR statistics lines.
- Red: delayed PR diff counts changed all three cards from 62 to 82
pixels. Green: their heights stay at 82 pixels before and after metadata
refresh.
- Nine browser journeys pass: delayed enrichment,
document/comment/unknown/continuation anchors, document clicks and
explicit history expansion with a retained draft, missing-comment retry,
delayed PR statistics, and retained older-comment position after
document navigation.
- 583 focused UI tests passed on `c91fa107ba`. After the plan-cache
follow-up, all 212 affected page/cache/plan-hook tests and UI typecheck
pass, including 14 plan-hook cases. The original 16 focused PostgreSQL
tests passed for the server changes.
- Merge-review red: holding the duplicate stored work-products read
blocked the first reveal past 10 seconds despite core already containing
the saved cards. Both empty and populated core projections now reveal
while that request remains pending. Malformed-comment tests prove no
target request is made; API tests prove path encoding and abort-signal
forwarding.
- The populated core-route test now inserts a real saved PR work product
alongside the plan and documents, then checks the complete saved
projection through HTTP. All ten task cold-open PostgreSQL tests pass.
- Plan-cache review red: an existing pending or errored plan query
prevented the saved core plan from reaching the consumer. Four real-hook
cases failed before the data-presence fix and pass afterward, for both
present and absent plans. A separately fetched newer plan or known
absent plan remains authoritative.
- Further layout red: the initial properties pane reduced visible thread
width from 775 to 742 pixels after reveal. The reveal now waits for two
stable width frames; the browser check includes width, height, card
counts and per-card geometry.
- `pnpm -r typecheck` and `pnpm build` passed for the original change;
UI typecheck and build pass after review fixes. Token, module-boundary
and map checks pass. `pnpm test:run` was stopped after about 15 minutes
in the serialized server lane. No full local test-suite pass is claimed.
On the earlier head, hosted build/typecheck and all Vitest lanes passed;
one E2E shard failed because the agent-configuration clipboard helper
copied page text into its YAML parser. On `c91fa107ba`, Greptile was 5/5
and every E2E shard passed, including the earlier clipboard case. One
unchanged Discord chat-binding test in server shard 8 returned false
after 185 ms; its 16-test integration file passes locally without
changes. The CI cause remains unestablished. On `be436ce492`, both
server shard 8 and E2E shard 7 passed without changing those tests or
their product code. On final head `e357b3bced`, all CI jobs pass,
including full general and serialized tests, all eight E2E shards,
typecheck, build and the aggregate verification gate. Exact-head
Greptile is 5/5 with no findings. The overall status rollup contains 55
successes, two intentionally skipped Storybook checks and a neutral
Paperclip Review. That advisory review ended without a complete
assessment; all previously posted findings are resolved and it added no
current findings.
- Test startup exceeded an initial 5-second deadline once while
development assets and other checks were active. The final browser
checks allow 10 seconds. These runs establish geometry and bounded
requests; they do not establish a reliable latency improvement. An
initial 503 error fixture exercised global reconnect/backoff. The
target-comment failure test uses a terminal 404.
- Browser data is synthetic. Provider metadata is simulated for the
delayed-response check. No staging deployment or live provider execution
is claimed.

## Risks

- Core task reads now include local saved-card queries and the saved
plan body. Other document bodies and all historical run activity remain
outside that path.
- First reveal waits for the bounded current structure. The existing
15-second incomplete-history fallback and inline retry remain available.
- Continuation-summary links open in the document pane in the current
task interface. Classic tasks keep their existing surface.
- No migration or mutation permission change.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, code editing, shell tools
and browser testing. The exact serving model ID and context-window size
are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 09:13:01 -05:00
DottaandPaperclip b81b870732 Add QA smoke journeys and OpenCode run traces (#18098)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Product E2E journeys verify saved application behavior across
deployments.
> - Task creation and questions need reusable smoke selections and exact
run attribution.
> - Operators also need to inspect the OpenCode execution behind a
measured question.
> - Company observability does not currently support native OpenCode.
> - This change adds the journeys and a bounded projection of normalized
OpenCode run events.
> - The projection follows the configured capture policy and retains the
current run identity across warm reuse.

## Linked Issues or Issue Description

Related foundation: #17262. Related alternative: #17989 exports metadata
from OpenCode's native OTLP stream. This change uses normalized run
events to support the existing content switches and per-run linkage. It
does not forward the native stream. The two PRs overlap in launch
registration and must be reconciled before both land.

**What existing behavior does this improve?**

Reusable Product E2E smoke selections and company observability for
native OpenCode.

**Current behavior**

The journey catalog lacks reusable task creation and attached-agent
question checks. Native OpenCode is marked unsupported for company
observability, so a successful destination connection test does not
prove that agent traces will appear.

**Proposed behavior**

Add explicit task-create and ask-question selections. Verify saved state
and exact company, issue, agent, model, environment and successful run
attribution. Export normalized OpenCode turns, tools and usage to the
configured OTLP destination. Honor each capture switch and redact known
secrets.

**Reason and benefit**

CI can run a small measured smoke selection, retain its screenshots and
checks, and link results to traces belonging to the same run.

**Breaking changes**

Existing selectors remain unchanged. OpenCode export is opt-in through
existing company settings. Legacy OpenCode stays unsupported.

## What Changed

- Add reusable task creation and question journeys, configured-agent
capability, owned-fixture checkpoints and strict evidence validation.
- Add an OpenCode-owned projection of normalized run events. No provider
SDK or raw payload schema enters heartbeat coordination.
- Extend the private launch union and reserved environment allowlist for
native OpenCode. With export disabled, no receiver request runs.
- Keep destination headers in the parent wrapper and out of the actual
provider child environment and configuration.
- Bound each turn to 64 tool and 64 usage entries, 8 KiB per text field
and a 1 MiB request. Use a three-second request deadline, four
concurrent exports, and no retries or idle worker.
- Pass the rotated runner authority to each proxy turn. A retained
process no longer attributes later turns to its original launch run.
- Update settings copy, observability documentation and capability maps.

## Verification

- `pnpm -r typecheck` and `pnpm build` passed after the implementation
changes.
- Adapter launch/redaction: 9 tests passed. Projection and actual proxy:
12 tests passed before the review fix; the expanded projection suite
passed all 12 cases after the fix. The proxy test exercises two runs in
one process against a real local HTTP receiver and a fake provider.
- Full OpenCode driver/projection suite: 72 passed, one existing
response_wake test timed out at five seconds. A focused check then
passed both existing omitted-continuation cases and the new trace export
case. The timeout cause remains unconfirmed.
- Runner package TypeScript and Rust `cargo check` passed. Map and UI
token checks passed.
- Prior journey validation: 273 tests across 12 files and the journey
TypeScript check passed.
- Broad local `pnpm test:run` encountered native-runtime integration
failures with repeated embedded PostgreSQL initialization failures and
was stopped. All 16 failing cases passed in an isolated run outside the
filesystem sandbox (961 unrelated cases unselected). The broad local run
is not a clean acceptance result. A later focused database-backed
chat/heartbeat run passed all six selected observability cases,
including native OpenCode launch and successful allocation (1,809
unrelated cases were unselected).
- All CI gates passed for `21085f880d8babc9efeb22d0623db99613d33093`,
including packaged-runner, clean-install, browser and build checks:
https://github.com/paperclipai/paperclip/actions/runs/40884658995 .
Greptile reviewed the same commit at 5/5 with no unresolved findings.
- Verified OTLP JSON acceptance and indexing with an explicitly
synthetic transport marker. No live OpenCode model trace or deployed
smoke acceptance is claimed yet.

## Risks

Export is best effort. Abrupt termination, recovered in-flight turns
without a new submitted event, limits or receiver failure can lose
traces. Export failure does not change task success. The projection
represents observed normalized events, not raw native model spans or
hidden reasoning. Known-secret redaction is not an OS isolation
boundary. UI changes can break journey locators. Deployment adapters
retain credential, ownership and cleanup responsibility. Both the
controller and native runner bundle must be updated before live
qualification.

## Model Used

OpenAI Codex, GPT-6, with reasoning, code execution and browser tools.
The exact serving model ID and context size are not exposed to this
session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass (targeted suites; broad
local limitation documented above)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 08:57:12 -05:00
DottaandPaperclip 7d8d1fbc1d fix(adapter-utils): provide a default author for local commits (#18094)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/209/changes/paperclip/209
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Agents use managed launchers for Git and GitHub commands.
> - These launchers exclude host credentials and host Git identity.
> - A checkout without an author cannot save a local commit when managed
GitHub identity is absent.
> - A local author default belongs in the launcher that owns this
isolation.
> - This pull request supplies a private Paperclip default and preserves
explicit and managed identity selection.
> - Agents can save local work without manual author setup or extra
GitHub access.

## Linked Issues or Issue Description

**What happened?**

An ordinary `git commit` fails with `Author identity unknown` in a fresh
checkout without author settings or a usable managed GitHub identity. An
agent must set its own author to continue.

**Expected behavior**

The managed launcher supplies a default local author. Repository and
command settings override that default. A current managed identity
retains its existing precedence.

**Steps to reproduce**

Run the managed launcher in a fresh Git repository without author
settings or broker credentials. Add a file, then run `git commit -m
work`.

**Paperclip version or commit**

Reproduced at `063cfd43813cabf18417605fb9eefb9aacf95c8d` on Linux with
Node 25.9.0 and pnpm 9.15.4.

**Deployment mode**

Managed sandbox execution. The shared launcher also serves local and SSH
execution that selects managed access.

Related: #16662 changes precedence for a connected GitHub account. #8945
assigns identity to managed worktrees. This repair supplies the missing
anonymous launcher default and keeps the current managed precedence. It
does not require either change.

### Hypothesis and thesis for a fix

**Hypothesis:** The launcher removes inherited author variables and host
Git config. Without a broker identity or explicit repository settings,
it has no author. Four real-Git cases reproduce the reported error on
the base revision.

**Thesis for a fix:** Put `Paperclip <noreply@paperclip.ing>` in a
private Git config for each operation. Git treats it as global config,
so repository and command settings can override it. The existing broker
environment still takes precedence. Do not store a person's identity in
shared checkout config, where it could remain after steering or
revocation. The default grants no GitHub access.

## What Changed

- Write the default author to the existing private operation directory
with mode `0600`. Remove it when the operation exits.
- Point managed Git at this file while keeping host global/system
config, credentials and SSH identity excluded.
- Add real-Git regressions for missing, absent, unavailable and rejected
access. Preserve explicit overrides, identity changes and revocation
controls.
- Verify two shell commits through normal launcher staging and a commit
after anonymous heartbeat cleanup. Check saved files, commit metadata
and temporary config cleanup.
- Update identity documentation and the two run map recipes.

## Verification

- Red: the four new local-commit cases fail on the base launcher with
`Author identity unknown`.
- Green: all 80 focused tests pass in one run across
`github-launcher.test.ts`, `github-launcher-environment.test.ts`,
`heartbeat-github-launchers.test.ts` and `native-github-access.test.ts`
(23.31 seconds).
- A controlled filesystem failure first made the candidate discard valid
managed credentials. After the correction, the same real launcher
process retains them. Default-author file failure does not change
operation-directory readiness.
- Review found a second failure: a partial write can leave invalid Git
config. The real-process test failed before the repair with `fatal: bad
config line` from `git status`. The launcher now selects the default
file only after the write succeeds. Both write-failure cases retain
managed credentials, allow status, require identity when no default is
available, and save a commit with explicit identity. The test reads the
stored commit metadata with real Git.
- Real shells, generated launchers and Git create and inspect saved
commits. Sandbox transport and broker replies use controlled fixtures.
No live cloud rollout or GitHub write acceptance is claimed.
- The isolated test process excludes inherited task launcher paths, Git
config and broker authentication variables. An initial run exposed those
test-environment inputs; the isolated replay passed. The heartbeat
assertion now checks the private default file and its cleanup instead of
expecting `/dev/null`.
- Adapter-utils typecheck and build pass. Map validation and `git diff
--check` pass.
- Conflict repair on 2026-10-29: merged master
`fa5e70faf47ef2ca20bf2daf95b7503c94469b89` into the PR branch. Resolved
19 conflict paths by retaining master for unrelated files. All seven Git
identity files remain byte-for-byte equal to the reviewed fix. The final
diff is seven files, 145 additions and 15 deletions.
- At head `c501e3f28369d404c91082b89188dc150c9362a9`, all 80 focused
tests pass again (37.53 seconds). Adapter-utils typecheck and build
pass. Map validation and migration checks pass. The PR diff passes `git
diff --check`.
- Full workspace typecheck and build were attempted again. Both stop
because this sandbox has no Rust `cargo`. The duplicate full local
Vitest run was stopped after about five minutes without a final result
while full CI was running. The earlier full local attempt was stopped
without a final result. No local full-suite pass is claimed.
- GitHub now reports the PR as mergeable. All current-head checks have
completed. [Full CI run
40878973679](https://github.com/paperclipai/paperclip/actions/runs/40878973679)
passes, including typecheck, build, Rust, test shards and all eight E2E
shards. The exact-head check inventory has 54 successes, one neutral
Paperclip Review and two Storybook skips. Snyk passes. Greptile and
Paperclip each reviewed `c501e3f28369d404c91082b89188dc150c9362a9` at
5/5 with no actionable findings. All review threads are resolved. GitHub
reports the PR as clean and mergeable.
- The prior CI run had one failed E2E test: `a lost creation response
requires reload and cannot blindly replay commands`. Its YAML parser
received page text that starts with `Skip to Main Content`. The new run
passes E2E shard 7/8 and the full E2E gate. The prior failure remains
part of this record. A passing run does not establish the earlier
failure's cause. This change does not alter that test or the agent
configuration UI.

## Risks

- Commits without explicit or managed identity now use the generic
Paperclip author. Operators can still set repository or command
identity.
- `git config --global` writes to temporary operation config and does
not persist. The documentation states this behavior.
- If the private config directory cannot be prepared, commits still need
explicit identity. Existing redacted diagnostics and credential
isolation remain.
- One small synchronous file write is added to a directory the launcher
already creates. No new subprocess, network request, persistent identity
or authority cache is added.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

OpenAI Codex, based on GPT-6, with reasoning, shell execution and tool
use. The runtime does not expose the exact model ID or context window
size to this agent.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 08:56:12 -05:00
scotttongandPaperclip 71f0c0c99e feat: add opt-in Coordinator workspace for chat, tasks, and decisions (#17983)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/147/changes/paperclip/147
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - People coordinate work through conversations, tasks, and requests
for input.
> - These surfaces must share task state and preserve the context of
each decision.
> - The existing workspace makes people switch surfaces to follow that
context.
> - This pull request adds an optional Coordinator workspace with linked
conversations, tasks, documents, and decisions.
> - Each person can enable it in Settings > Experimental and return to
the classic workspace.
> - The benefit is a coherent path from a request to an assigned task
and reviewed work.

## Linked Issues or Issue Description

**Subsystem affected**
UI, server, shared contracts, and database.

**Problem or motivation**
People need a consistent way to start tasks from agent conversations,
answer questions, review work, and return to the source context.
Decisions and task state must agree across these surfaces.

**Proposed solution**
Add a personal, default-off workspace experiment. Keep one conversation
per agent. Add task proposals, compact task and decision cards,
contextual document panels, and a Needs You queue with search, filters,
sorting, grouping, and history.

**Alternatives considered**
Replacing the classic workspace for everyone would remove the opt-out
path. Keeping separate decision state in each surface would create
conflicting answers. This change uses the existing canonical task and
interaction records instead.

**Roadmap alignment**
This supports the existing agent chat, task management, and human review
capabilities. It is an experimental presentation choice. The user
requested this isolated implementation after design review. No Discord
discussion is claimed.

## What Changed

- Add per-person workspace preferences, a default-off setting, and an
additive migration.
- Add Coordinator navigation, pinned destinations, task lists, agent
switching, and contextual panels.
- Link task suggestions and creation to the source conversation. Default
new task ownership to the current agent unless the user specifies
another owner.
- Share pending questions, decision receipts, exact review targets, and
history across tasks, chat, and Needs You.
- Preserve task access, assignment authorization, revision binding, and
required output review gates.
- Add compact document links, relative timestamps, composer controls,
and reduced-motion support for task and decision transitions.
- Add component stories, regression coverage, and capability-map
documentation.

## Verification

- Final head: `4b839aae1e314bd7e8635a766f1d205ff1c03ba6`, based on
master `8bc051245f77a47bee0f8ba45896b8bfa5922e0a`. Verified October 29,
2026 at 00:10 UTC: **MERGEABLE, 56 checks passed, four conditional
skips, no pending or failed checks**. [Current CI
run](https://github.com/paperclipai/paperclip/actions/runs/40790639688)
passed without a rerun on this head.
- Fresh Greptile **5/5**, zero new comments and zero open review
threads; Superagent passed with no suspicious changes.
[Checks](https://github.com/paperclipai/paperclip/pull/17983/checks).
- Local workspace typecheck/build passed after the latest rebase. The
final account-read patch passed UI typecheck/build and all 12 related
preference/settings tests, including a delayed real-client request
across account changes. Earlier scoped checks cover review
deduplication/replay, decision deep links, cross-surface state, access
boundaries, and migration replay.
- Local database/browser rechecks after the latest rebase were limited
by exhausted macOS shared-memory IDs: `initdb` failed before database
creation. The local run passed 31 UI/snapshot tests and skipped 24
database tests; those skips and the blocked local browser start are not
claimed as passes. The independent Linux CI database and browser checks
passed. No running dev database or host setting was changed.
- Upstream migration 0403 is preserved. Preferences and durable review
retry aliases are generated as replay-safe migrations
`0404_tense_silver_sable.sql` and `0405_harsh_avengers.sql`; five newest
snapshots are retained. Every detected conflict was rebased and pushed
before waiting for CI/review, as requested.
- The PR is unmerged. The active master ruleset still requires
code-owner approval for the changed Paperclip skill; no approval or rule
change was performed.

<details>
<summary>Earlier verification failures, integration history, and
evidence</summary>

These entries preserve prior checkpoints and failures; the current
acceptance result is above.

- Focused UI and server checks from the isolated build are recorded in
the implementation plan.
- Browser checks covered the opt-in shell, navigation, task/document
links, and decision card states. No new live provider trial is claimed
for this handoff.
- Current acceptance head: `4b839aae1e314bd7e8635a766f1d205ff1c03ba6`,
rebased onto master `8bc051245` immediately after its GitHub
review-repair migration took 0403. Preferences are generated as
idempotent `0404_tense_silver_sable.sql`, preserving upstream
SQL/journal/snapshot history and five newest snapshots. GitHub reports
MERGEABLE after the immediate lease-protected push. Scott's updated
instruction is to rebase and push every conflict resolution first,
without waiting for CI or Greptile; verification follows the push.
- The final reviewed feature tree was consolidated for repeatable
single-commit rebases. The complete previous commit history remains
reachable through local recovery ref
`codex/coordinator-recovery-before-rebase-20261028` (resolved snapshot
`0e1bbdf4e`). The actual rebase completed, and its tree hash exactly
matches that resolved snapshot. The force-with-lease required the known
remote head `0e6ef7c44`, protecting against concurrent branch changes.
No PR merge or permission/runner setting change occurred. Fresh
CI/review are in progress for the current head.
- `2001132fa` received Greptile 5/5 with one nonblocking account-switch
read finding. Current head detaches path-coalesced preference GETs and
disables HTTP caching, retaining React Query's account-scoped sharing. A
delayed real-client GET regression proves account B can load its saved
choice before account A responds, and A's late response only updates A's
cache. Preference/settings tests 12/12 and UI typecheck passed; its
review thread is resolved. Fresh current-head CI/reviews are pending.
The prior CI chat shard 3 ended with “The operation was canceled” and no
assertion failure ([job
123171595631](https://github.com/paperclipai/paperclip/actions/runs/40789688333/job/123171595631),
`/tmp/pr17983-2001132-chat3.log`); no code/timeout change is attributed
to that cancellation.
- `843e823b4` reached fresh Greptile 5/5 with zero comments/open threads
and Superagent pass. All browser tests including the repaired YAML shard
passed, and 54 checks passed. General server shard 9 ended with “The
operation was canceled” and no failed assertion; its test step was
marked cancelled (job
[123164350893](https://github.com/paperclipai/paperclip/actions/runs/40787501761/job/123164350893),
log `/tmp/pr17983-843e-server9.log`). A single unchanged-head rerun was
started after the workflow completed, but master moved while it ran. A
local nested-clone check timed out in its 30-second database-startup
hook and then failed cleanup before the 20 database cases ran; this is
retained as a local verification limit
(`/tmp/pr17983-843e-nested-clone-check.log`), not claimed as a pass or
proof of the CI cancellation cause.
- Following Scott's instruction, the new conflict was rebased and pushed
immediately without waiting for that rerun. Upstream's
`0403_natural_cerise.sql` is preserved; regenerated preferences and
retry-alias migrations are `0404_tense_silver_sable.sql` and
`0405_harsh_avengers.sql`, replay-safe with five newest snapshots
retained. The YAML helper conflict combines upstream's click and header
behavior with the editor-selection guard and injected regression.
Recovery ref `codex/coordinator-recovery-843e823b4` preserves pre-rebase
work. Current head is MERGEABLE. Full workspace typecheck/build passed;
UI and snapshot checks passed 31 tests, but 24 database tests were
skipped by the local support probe, and the local browser server could
not initialize PostgreSQL. A direct disposable `initdb` diagnostic
established the host limitation: `could not create shared memory
segment: No space left on device` (`shmget`, shared-memory IDs
exhausted, not disk space). No dev database or host setting was changed.
Diagnostics: `/tmp/pr17983-2001132-initdb-probe.log`,
`/tmp/pr17983-2001132-db-probe.log`; checks:
`/tmp/pr17983-2001132-tests.log`, `/tmp/pr17983-2001132-browser.log`,
`/tmp/pr17983-2001132-types.log`, `/tmp/pr17983-2001132-build.log`.
These local skipped/blocked checks are not claimed as passes; fresh CI
on independent runners is in progress.
- `d18f683cd` reached fresh Greptile 5/5 with zero comments/open threads
and Superagent pass, but [E2E shard
7](https://github.com/paperclipai/paperclip/actions/runs/40785966243/job/123159719925)
failed parsing an Advanced YAML clipboard read beginning with “Skip to
Main Content.” The log is retained at `/tmp/pr17983-d18f-e2e7.log`.
Current head hardens the test helper to verify editor focus and
selection, clear stale clipboard content, and require the YAML header at
the start of a fresh copy before parsing. Saved-state assertions and
timeouts are unchanged. All six Advanced YAML browser journeys passed on
a disposable local instance (41.0s); the exact lost-response journey
also passed with a one-time injected surrounding-page copy, verifying
rejection/reacquisition (17.6s). The precise browser focus/clipboard
timing in CI remains unproven; the observed invalid-read path is now
guarded and deterministically exercised. Logs:
`/tmp/pr17983-yaml-clipboard-scope-browser.log`,
`/tmp/pr17983-yaml-clipboard-injected-browser.log`. Fresh current-head
CI and reviews are pending.
- `19e6dcb0b` passed Superagent and Greptile 5/5, with one nonblocking
deep-link finding. Current head preserves attention links using
`?decisionId=`: the requested pending decision is rendered even beyond
the first 40 cards, focused and scrolled into view, then only that
parameter is consumed so later refreshes do not refocus. Other URL
parameters remain. Needs You tests 10/10 and UI typecheck passed; its
review thread is resolved. The preceding post-rebase regression run
passed 45/45 tests. Fresh current-head CI/reviews are pending.
- `6d772b7cc` reached Greptile 5/5 with zero comments/open threads and
Superagent pass. While 32 checks had passed, master moved and caused a
documentation conflict in `maps/feature-map/onboarding.md`. Rebased
immediately, preserving both onboarding paragraphs. The complete
four-commit branch was pushed as `19e6dcb0b` before waiting on
CI/review, per Scott's instruction. A transient Git index lock
interrupted the first continue; the command sequence briefly pushed
intermediate `34e298c07`, then the completed rebase was immediately
pushed. All feature and security/retry fixes are present; local recovery
ref `codex/coordinator-recovery-6d772b7cc` preserves the pre-rebase
history. The only tree differences from that ref are upstream's two
smoke-test files and the combined documentation paragraph. GitHub
reports MERGEABLE. Fresh current-head verification is in progress;
prior-head review results are not current acceptance.
- `21efa3120` passed Superagent but Greptile scored 4/5 for a valid
retry-key persistence bug: an acknowledged duplicate key could reopen a
resolved review. Current head adds an additive, replay-safe
`0404_light_swarm.sql` migration for indexed, task-scoped aliases from
acknowledged retry keys to the canonical interaction. Alias registration
and retry lookup occur under the existing task lock; payload/actor
mismatch still conflicts, and each canonical review permits at most 100
aliases. Original and acknowledged keys replay the terminal result
rather than creating a new gate. Five newest migration snapshots are
retained. Service/routes tests 165/165 passed; final quality review plus
migration replay/snapshot checks 25/25 passed; server typecheck passed.
The P1 thread is resolved in code; fresh current-head reviews and CI are
pending.
- `69c2c7543` passed 55 checks and Greptile 5/5 with no open Greptile
findings, but Superagent check
[123140675812](https://github.com/paperclipai/paperclip/pull/17983/checks?check_run_id=123140675812)
correctly flagged unbounded pending quality-card creation. Current head
fixes that under the existing task-row lock: equivalent requests with
fresh idempotency keys reuse the pending card; conflicting requests for
an unresolved deliverable return the existing interaction ID; pending
cards are capped at ten per task across all reviewers. Distinct outputs
remain independent, and already-answered items in a partially pending
batch can receive a fresh review. Added real-database concurrency,
cross-card duplicate, partial-answer, and hard-cap regressions. Quality
review 22/22 tests and final server typecheck passed; earlier
service/routes 163/163 tests passed before the final partial-answer
refinement. One added assertion initially expected a service HTTP error,
but duplicate keys are rejected earlier by the existing shared schema;
the assertion now verifies that validation. Fresh current-head
CI/reviews are pending; the action-required security result is not
treated as passed.
- `c9c575e5f` completed all 56 checks successfully with four conditional
skips, Greptile 5/5, and Superagent pass. Its two P2 review findings are
fixed in the current head: independently bound quality approvals now
each remain visible in attention; changing/clearing URL-backed
assignee/status filters updates the URL and survives task navigation.
Both review threads are resolved. Regression evidence: attention service
34/34 tests passed, CoordinatorTasks 20/20 passed, UI and server
typechecks and the full workspace build passed on `69c2c7543`. The first
new UI test run caught an assertion racing React Router's transition;
waiting for the navigation before asserting passes without weakening the
navigation/remount checks. These older-head green checks are not claimed
for the new fix commit.
- Preceding `0e6ef7c44` completed all 56 checks successfully with four
conditional skips, fresh Greptile 5/5 and no open findings, and passed
Superagent. A fifth migration-metadata collision arrived before the
final Runner job finished. Those green results are preserved as
prior-head evidence, not current acceptance.
- Previous fully verified migration head:
`0e6ef7c44696a377f35e69521b93587576374bd0`, integrating master
`f8226b051` after the fourth migration-number collision. Master added
terminal GitHub-response migration 0401 while the final native check
ran; upstream 0401 SQL/journal/snapshot is preserved unchanged, and
preferences are generated as idempotent `0402_yielding_blink.sql` on
top. Exactly the five newest snapshots remain. GitHub reports MERGEABLE
after the push. All 1,155 relevant
migration/review/interaction/native-execution/remote-assets tests,
workspace typecheck/build, migration guards and whitespace checks pass.
Fresh exact-head CI/Greptile/Superagent are pending.
- Immediately preceding head `36c67cf03` completed all 56 checks
successfully with four conditional skips, fresh Greptile 5/5 and no open
findings, plus passed Superagent security. No retry was needed for that
head's CI. Master advanced and introduced only a migration-metadata
conflict while its final native check ran, so that green result does not
establish acceptance of the current integration. Four consecutive
collisions (0398, 0399, 0400, 0401) during verification are retained as
concrete integration churn; a brief pause of competing migration merges
was requested, without assuming it happened or changing any repo
setting. The PR has not been merged.
- Prior fully verified head: `36c67cf03`, on the clean `30059c0ed`
integration of master `efd65c112`. The last Greptile P2 is fixed: Needs
attention retains the participant-agent scope through authoritative
server membership queries for each pending task, including historical
participation when another agent currently owns the task. It does not
approximate participation with current assignment or enumerate every
company task. The actual view-switch regression and all 31 focused
task/routing/collection tests, UI typecheck/build, token gates and
whitespace checks pass. Greptile completed a fresh 5/5 review on this
exact head (review 19) with zero new comments and no open review
threads. CI and Superagent remain in progress; no current-head CI
failure has been reported.
- Head `30059c0ed` received Greptile 5/5 with that one nonblocking
participant finding, now fixed. Superagent passed that head.
Current-base integration restored the ephemeral RunsOn fleet after a
superseded workflow retained queued aggregate jobs: normal cancellation
was insufficient; the single force-cancel request was interrupted but
readback confirmed that obsolete run cancelled and current CI began on
the trusted fleet. No cancellation retry or runner/security/workflow
changes were made. Its partial CI was superseded by the necessary
participant fix and is not current acceptance.
- Previous compatibility/base-sync head:
`30059c0ededc0eab4e04e8299a884f36db8b292f`, integrating master
`efd65c112` and the Inbox/workspace compatibility fixes. GitHub reports
MERGEABLE after the push. Coordinator keeps Inbox standalone under More
without rewriting the instance's Combined Inbox preference; opting out
restores that preference. Saved merged-Inbox URLs resolve to their
original owner, task status presets remain usable, and canonical
repeated `workspace` parameters retain scoped, deduplicated pagination
(including Needs attention). All 192 broader
routing/Inbox/sidebar/privacy/review tests and the final 16 task-page
tests pass, as do workspace typecheck/build, token gates and whitespace
checks. The two review threads are resolved. Fresh exact-head CI,
Greptile and Superagent results are pending.
- The preceding `d5b9be5bd` remained mergeable but its CI routing gate
intentionally fell back to GitHub-hosted runners: “stacked base merge
commit does not contain the current base branch.” All 45 downstream jobs
stayed queued. Current master was merged cleanly to refresh the pinned
base; no runner/security settings or workflow logic were changed.
Greptile scored that preceding head 4/5 with the two compatibility
findings fixed here. Its automatic Superagent scan was inconclusive at
checkout; the documented retry was still pending when superseded. Those
results do not establish acceptance of this current head.
- Previous approval/migration head:
`d5b9be5bd3b8d6b0437e42bf48138377f34fa67d`, integrating master
`ba5bba86d` and the stale-output approval correction. GitHub reports
MERGEABLE after the push. The fresh P1 finding is fixed: every submitted
item now validates and locks its bound output inside the resolution
transaction, whether or not it carries a required-quality-review
binding. Real database regressions verify that an advanced document
revision or deleted attachment refuses the entire batch without
recording approvals, and current ordinary output reviews still resolve.
All 272 combined migration/review/interaction tests pass; workspace
typecheck/build passed. Fresh exact-head Greptile and CI are pending.
The automatic Superagent scan ended inconclusive at checkout; one
documented on-demand retry is pending. These are explicit verification
limits, not passed security results. The P1 thread is resolved.
- Master consumed the next migration slot three times during this
verification pass: confirmation recovery took 0398, continuation
recovery took 0399, and GitHub acknowledgement recovery took 0400. Each
upstream SQL/journal/snapshot is preserved unchanged. Preferences are
now generated as idempotent `0401_white_lenny_balinger.sql` from
upstream 0400; exactly five snapshots remain, and replay coverage
locates this migration by table content. This is recorded concurrent
integration churn, not a claim that older green results apply to the
latest base.
- Head `ed3b68da9` fixed the two history/URL findings with 26 focused
regression tests, server/UI typechecks, workspace build and token gates
passing. Greptile then scored that head 4/5 with the stale-output P1
corrected in the current head. Its partial CI is superseded, not counted
as current acceptance.
- Previous filter-fix head: `ed3b68da9`, based on the `8458d39d9` merge
of master `063cfd438`. The two fresh Greptile findings are fixed:
history outcome filters now match recorded per-item verdicts in SQL
before pagination (mixed reviews remain in both applicable outcomes),
and same-page URL assignee changes/back/forward navigation update that
filter without clearing independent filters. All 26 focused
database/navigation/collection tests, server/UI typechecks, workspace
build, token gates and whitespace checks pass. The two review threads
are resolved. Fresh exact-head CI, Greptile and Superagent results are
pending.
- The `8458d39d9` migration integration also passed all 328 targeted
migration/interaction/confirmation tests, workspace typecheck/build and
Superagent security scan. Greptile scored that head 4/5 with the two
functional gaps fixed in the current head; those prior-head checks are
not current acceptance.
- Migration integration head:
`8458d39d9721f4cb312c2390070a0609f8cddd1a`, integrating master
`063cfd43813cabf18417605fb9eefb9aacf95c8d`. GitHub reports MERGEABLE
after the push. Master advanced twice during this conflict-resolution
pass: first its confirmation-recovery migration took 0398, then its
continuation-recovery migration took 0399. Both upstream migrations and
journal entries remain unchanged; Coordinator preferences are now
generated as idempotent `0400_sad_guardian.sql` from upstream's latest
snapshot. Exactly the five newest snapshots remain. The replay
regression now locates the table migration by content instead of
hardcoding a renumbered filename.
- All 328 targeted question/review/confirmation/migration tests passed
again after the second merge. Workspace typecheck/build and fresh
exact-head CI/reviews are in progress. The preceding `0c46f46d6` passed
workspace typecheck/build and Superagent security scan, but was
superseded because master consumed migration 0399 while those checks
ran. That prior-head result is not acceptance of the current head. No
production settings or runner/security permissions were changed, and the
PR has not been merged.
- Previous integration head: `0c46f46d6f2b23417ab872ce3cb6ff2673647287`,
integrating master `287b04d72f1b9fca1412e05435c75b8302ba0710`. GitHub
reports MERGEABLE after the push. The renewed conflicts were
`0398_snapshot.json`, `_journal.json`, and the top imports in
`issue-thread-interactions.ts`. Upstream's `0398` confirmation-recovery
index and journal history are preserved unchanged; Coordinator
preferences were regenerated as idempotent `0399_bouncy_miek.sql`, with
replay coverage updated and exactly the five newest snapshots retained.
Both terminal confirmation notifications and Coordinator task
assignment/required review behavior are preserved.
- All 328 targeted interaction/review/confirmation/migration tests pass,
as do workspace typecheck, map validation and whitespace checks. The
workspace build and fresh exact-head CI/Greptile/Superagent checks are
pending. The first migration-generation attempt hit the sandbox's local
IPC restriction before generating files; the unchanged authorized local
generation completed successfully. Prior-head green checks below do not
establish acceptance of this merge.
- Previous acceptance head: `8b7dcf739ed15afc51351fdfa0e0e5fbc75ab788`,
with master `1aa3a21ac` integrated and GitHub reporting MERGEABLE.
Greptile completed a fresh 5/5 review on this exact head with zero new
actionable findings and no open review threads. The [fresh CI
workflow](https://github.com/paperclipai/paperclip/actions/runs/40752864319)
completed SUCCESS on attempt 2 at 19:40:08 UTC, including all eight E2E
shards. Final completed check set: 55 succeeded, four conditional checks
skipped, zero pending/queued/running checks, and one
neutral/inconclusive Superagent scan. The auxiliary commitperclip review
and isolated native Runner compilation/cache-reuse check both passed.
This is not a claim that Superagent produced a passed security verdict.
GitHub still reports MERGEABLE against current master
`60b8089a44b4eaa37e627adbfdf2f130bda13335`.
- Current-head E2E: all eight shards and the aggregate passed, including
the previously failing YAML browser journey. Serialized server shard 9/9
failed: the protected YAML projection test exceeded its original
15-second timeout; its late update request then reached the next test's
reset mock (the captured payload is the prior test's model/label
update). All 88 tests in that exact unchanged file passed locally in
38.03 seconds, with no timeout or assertion changes. The original
slow-request cause remains unproven. CI failure log:
`/tmp/pr17983-8b7-serialized9.log`; local recovery:
`/tmp/pr17983-adapter-yaml-repro.log`. The single bounded unchanged
shard rerun passed, and the workflow completed SUCCESS. Rerun log:
`/tmp/pr17983-8b7-serialized9-rerun.log`. The initial failure is
retained; a passing retry does not establish its original slow-request
cause.
- Greptile scored preceding head `4873704be` 5/5 with one valid P2:
opened task decision records missed company-scoped live invalidation.
The current head uses the existing company decision prefix for
resolution and effect-completion events, and resets private record
payloads on access changes. Its thread is resolved. All 107 focused
record/live-update tests, UI typecheck/build, token checks and
whitespace checks pass.
- CI on `4873704be` failed E2E shard 7/8 in the Advanced YAML
lost-creation-response journey: its clipboard helper selected page text
starting with “Skip to Main Content” instead of YAML. The exact
unchanged journey passed in a disposable local browser instance (1 test,
17.1 seconds). No assertion, timeout or production behavior was
weakened; the original failure cause remains unproven. Failure log:
`/tmp/pr17983-487-e2e7.log`; local check:
`/tmp/pr17983-agent-yaml-repro.log`. The full unchanged Advanced YAML
browser suite also passed locally (6 tests, 37.8 seconds). Fresh
current-head CI subsequently passed this journey and all other E2E
shards.
- Both the automatic and one supported on-demand Superagent scan on
`4873704be` ended neutral/inconclusive: “Pinned PR scan merge-base
checkout failed or timed out.” These do not count as a passed security
verdict. The current head's automatic scan and one documented on-demand
retry also returned the identical neutral checkout failure, with zero
annotations or further diagnostics. This is an external scanner blocker,
not a passed security verdict. No security settings or permissions were
changed.
- Recorded decision links now render and focus the full source-task
record in both Classic and Coordinator, including recorded choice,
submitted inputs, and the existing effect-result resolver. Fresh
terminal records take precedence over older open-decision cache entries.
Context and account checks keep mismatched or inaccessible records out
of the DOM; no decision-history tab was added to tasks or chat. The
shared company live-run feed now drives live-only filtering, including
ended runs and terminal tasks with stale run entries. All 213 focused
tests, UI typecheck/build, token and whitespace checks pass; the final
focus follow-up passed all 188 task-detail tests and UI typecheck. The
first new navigation test failed because its test host omitted company
context; the host was corrected before the passing run.
- Previous integration head: `375c5e89516705050d94bab99336212841b2e6e1`
merges master `1aa3a21ac` after four additional upstream commits. The
sole conflict was competing imports in `server/src/services/issues.ts`;
both quality-review policy and inbound wake-notice notifications are
preserved. The PR-specific review import now sits beside
execution-policy imports instead of the frequently changing first line.
GitHub mergeability is rechecked after the push.
- On the combined master tree, workspace typecheck/build, all 153
affected UI tests, map validation, and whitespace checks pass. Four
server suites passed 77 tests; the fifth suite's module-import hook
timed out while broad verification was running. Its unchanged isolated
run passed all 41 tests in 7.2 seconds with the original timeout. This
records recovery without claiming the original import-timeout cause is
proven. CI on `375c5e895` passed every substantive job, including all
eight E2E shards and Superagent; Greptile found the two functional gaps
fixed in the current head. A short-lived `669d90876` commit added the
main fixes before the focused navigation follow-up.
- Immediately preceding head `9d9737b49` completed all 56 checks
successfully with four conditional skips, Greptile 5/5 and no open
findings, plus a successful Superagent scan. The signoff E2E shard
passed on its single accepted rerun; its initial cancellation/timing
failure is retained below. Master moved again while those checks ran,
requiring this final integration rather than treating the prior head's
green result as current acceptance.
- Previous head `9d9737b496911a6054d0ea22d1b42b28b115e9ab` includes
master `d30c8f42b842327ee1c18c41a2efd6ba623da5cd`; that head was
subsequently conflicted by moving master. The master merge preserved
durable account-bound writes and Coordinator UX. Workspace
typecheck/build, 416 focused UI tests, and 142 affected comment-route
tests passed. A stable full UI run on preceding head `938ad1665` passed
all 9,833 tests across 836 files; its final full workspace build also
passed.
- Greptile found nested proposal project inheritance and Classic
bound-revision links on `91be74952`. Both were fixed with 142
interaction-route tests, 113 focused UI tests, and UI/server typechecks.
Its next review identified a valid draft-preservation bug in the new
Classic loading UI. Head `9d9737b49` keeps loading/error notices outside
editors and annotations while preserving dirty drafts; 115 focused
review UI tests pass, including pending/failed revision loads and
continued draft editing. All related threads are resolved. Greptile
completed a fresh 5/5 review of
`9d9737b496911a6054d0ea22d1b42b28b115e9ab` with no open findings.
- CI on `938ad1665` exposed an integration regression with the newly
merged durable startup saves: the personal preference gate blocked the
task page before its first session lookup. The guarded title editor now
mounts while that lookup is pending, with presentation-specific tools
still gated. All 216 affected component tests pass. The unchanged
five-test `disconnect-write-recovery.spec.ts` browser suite passes
against a newly launched disposable local-trusted PostgreSQL instance on
port 33219, including the exact failed startup-save journey. No live
provider, hosted authentication or production proof is claimed. The
helper-owned test server exited and the port has no listener. UI
typecheck, built-browser assets, token and whitespace checks pass.
- Initial durable-write merge tests found duplicate imports and unscoped
draft fixtures, fixed before 416 focused tests passed. A sandbox
typecheck could not create its IPC socket; the supported rerun passed.
The first revision-link test used a wrong Return to latest button
assertion, corrected before the 113-test pass. The startup E2E
reproduction initially still failed because an outer shell gate also
blocked the page; the subsequent fix passed all five cases without
changing the test or its timeouts. A focused loading-header assertion
initially used an incorrect fixture title; correcting it preceded the
216-test pass. These failures remain recorded.
- Earlier routing gates fell back to GitHub-hosted runners while master
was moving or conflicted. Superseded queued runs were cancelled, then
the `938ad1665` routing gate explicitly selected the ephemeral RunsOn
fleet. Its CI actively executed and completed most tests; only the
diagnosed startup E2E shard and aggregate failed, alongside the valid
Greptile finding. Auxiliary GitHub-hosted workflows also completed
successfully on earlier heads, so queueing alone is not an
administrative blocker. Fresh [CI on
`9d9737b49`](https://github.com/paperclipai/paperclip/actions/runs/40744012678)
is the acceptance target; the previously failing startup E2E shard now
passes. A different signoff E2E shard failed during executor
resubmission when its fixture run was cancelled as
`issue_continuation_waiting_on_review`. The exact unchanged journey
passed locally (1 test, 46 seconds), and the preceding head with
identical server/signoff code passed that CI shard. This supports a
bounded rerun but does not establish the timing failure's root cause.
After the workflow finished, GitHub accepted one rerun of that failed
shard and its dependent aggregate; both passed, completing all checks on
that head. The failure log is retained at `/tmp/pr17983-9d9737-e2e7.log`
and the local reproduction at `/tmp/pr17983-signoff-repro.log`. No
assertion or timeout was weakened.
- On the first merge, full workspace typecheck/build, all 9,622 UI
tests, 267 tests across seven affected server suites, two migration
checks, map validation, token gates, and the PR diff whitespace check
passed. Greptile then found duplicate local task-search filtering and
lost completed item-review detail. Both are fixed, with 42 passing
focused UI tests and passing UI typecheck/build.
- A subsequent Greptile review found attachment confirmations without
working links and mobile history without a visible host. Confirmation
layouts now derive the authenticated immutable-content endpoint from the
attachment ID, and Needs You uses the existing full-screen mobile sheet.
All 119 focused tests pass, including missing/stale display URLs, both
review layouts, and both mobile history entry buttons. UI
typecheck/build and token checks pass. Full workspace typecheck/build
also pass after the second master merge.
- Greptile gave head 22f69c304 a 5/5 score with one non-blocking
desktop-history reopening finding. Head 6dd52b6d3 fixed it, passed all
nine history tests, UI typecheck/build, token gates, and the full
9,679-test UI suite, then received a fresh 5/5 review with zero open
findings. These are prior-head results; review on the master-sync commit
is pending.
- The chat and workspace CI jobs on head 22f69c304 were interrupted by
runner shutdown signals and cancellation before completing their tests.
Their logs do not report failing assertions. Those interrupted jobs are
not claimed as passes. The new head starts fresh runs.
- The first merge CI had a Slack session-sync idle assertion fail after
an unexpected database read. Its exact isolated reproduction passes, and
the chat CI shard passed on head 618c5a2a3. The original failure's cause
remains undetermined. The broader local reproduction, run concurrently
with full verification, instead encountered 21 timeout failures across
its two test chunks; it is not claimed as a passing full local server
run. A concurrent local UI run had eight failures (seven timeouts and
one delayed autosave assertion). The complete UI run on the final head
passed all 9,679 tests across 830 files with two workers; no test
timeout or assertion was weakened. This establishes recovery without
claiming that every earlier timeout's cause has been proved. An earlier
intermediate UI run also overlapped the second master merge and failed
the newly added Advanced-sidebar expectation, so it is not treated as
stable-tree evidence. The newly merged UI dependencies initially
required refreshing the local install from the upstream package
manifest; the generated local lockfile update is not committed, per
repository policy.
- Superagent returned neutral/inconclusive scans on the preceding heads
because its pinned merge-base checkout failed or timed out. The
available retry endpoint returned 404. These are not successful security
verdicts. The fresh scan on `91be74952` passed (PR scan passed; no
suspicious PR changes detected). The `938ad1665` scan again returned
neutral/inconclusive with the same pinned merge-base checkout error; the
check-suite rerun endpoint returned 404. The fresh `9d9737b49` scan
completed successfully at 18:22 UTC with no suspicious changes detected.
Earlier neutral scans are not counted as successful security verdicts.
- Prior head `57902152ac3218096fca669d33ff18400a2a86ae` passed 9,618 UI
tests across 826 files, received Greptile 5/5 with no open findings, and
completed CI with 56 passes and four conditional skips. These are
historical results, not acceptance of the latest merge commit.
- The first full build found generated capability-contract drift. The
generated outputs were refreshed. Initial sandbox runs could not open
local IPC sockets; verification was rerun with local test access.
- Current master was merged. The workspace preference migration was
regenerated after the existing migration history.
- The UI run first found two outdated expectations: early custom-answer
validation and the document access error copy. Both were corrected, and
the full UI suite then passed.
- The local server run found three failures in unchanged tests. The Muse
test passes with Python 3.13 instead of the host's Python 3.9. The two
workspace tests pass when their test process uses the expected master
default branch. These environment settings do not change application
behavior or global machine settings. The unsharded server run was
stopped after those reproductions; CI supplies the full sharded server
result. No successful full local server run is claimed.
- Skill inventory generation needs an external eval checkout, which is
absent locally. The existing generator functions refreshed only the live
skill inventory and its derived files. The checked-in eval inventory was
preserved. The inventory validation gate passes.
- Greptile found a dropped MCP review requirement, missing per-item
output links, generic item-review summaries, and a history-refresh
failure. The fixes have 32 passing database-backed server tests and
focused rendered-card tests. A follow-up partial-review finding was
corrected by forwarding the canonical mutation status before settling
the card. Attachments open through the authenticated immutable-content
route in both card layouts. The final focused UI set has 117 passing
tests, including these regressions.
- Both browser shards that first failed expected a disabled-chat
message. The copy was restored, and those shards passed in CI on the
next commit. The two journeys also passed locally. One local attempt
first timed out before feature disable while waiting for the provider's
initial message; its isolated reproduction passed. That earlier timing
failure remains recorded and is not presented as an explained
infrastructure failure.
- Serialized server shard 9 first failed during pnpm setup with
ECONNRESET, before dependencies or tests ran. Its single rerun passed
setup and all tests. The build and production runtime boot passed on the
first attempt, but that run's public-install step timed out during Pi
setup. The single build-job rerun passed compilation, runtime boot, and
clean public-install verification. Those setup scripts are unchanged by
this PR. The successful retry establishes recovery; the earlier Pi
timeout's underlying cause remains undetermined. The aggregate CI gate
is green: [workflow
run](https://github.com/paperclipai/paperclip/actions/runs/40637789695).

</details>

## Risks

- This touches shared task, interaction, and completion paths.
Regression tests must cover classic and experimental behavior,
authorization, duplicate answers, and stale review targets.
- The additive preference table must migrate before the setting is used.
The setting defaults off.
- The experiment changes navigation and message presentation. Canonical
task and document records remain the source of truth.
- The initial task brief and saved plan can repeat information. This
change fixes chronology; a broader redundancy policy remains a design
decision.

## Model Used

OpenAI GPT-6 Codex with reasoning and tool-assisted code editing, tests,
and browser verification. Earlier iterations used Codex models in this
task; their exact model IDs are not available in the current context.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used
- [x] I have checked ROADMAP.md
- [x] I have searched GitHub for duplicate or related PRs
- [x] I have described the issue in-PR following the relevant issue
template
- [x] I have not referenced internal/instance-local Paperclip issues or
links
- [x] My branch name describes the change
- [x] I have run relevant tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation
- [x] I have documented risks
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open recommendations or follow-ups
- [x] I will address review comments before requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-28 17:20:01 -07:00
DottaandPaperclip c74171d620 fix(recovery): retire superseded native workspace retries (#18077)
## Thinking Path

> - Paperclip coordinates agents while retaining their work and
execution authority.
> - A failed native run can schedule an exact-session retry and retain a
sandbox.
> - An explicit task Retry can already have completed successfully on a
successor.
> - Recovery correctly refuses the old run after its task execution lock
changes.
> - It nevertheless leaves that old retry scheduled and its workspace
without a preservation owner.
> - This change retires that proven superseded retry and registers
exact-source preservation together.
> - Existing stop receipts and saved-file verification still control
workspace switching.

## Linked Issues or Issue Description

**What happened?**

A native sandbox run failed before starting a provider turn. An explicit
Retry completed on a linked successor. The original coordinator remained
in `retryable_failure` with an active sandbox lease. Restart recovery
returned `issue_execution_lock_changed`, while the ordinary sweep kept
delaying it. A pending workspace selection then made every new task run
fail during setup.

**Expected behavior**

Stop replaying a failed retry after its linked explicit successor has
completed. Preserve the original files through the existing system
worker. Keep the current task, ownership, pending choice, and unresolved
action outcomes intact.

**Steps to reproduce**

1. Persist a failed, unowned native run with a prepared remote workspace
and `retryable_failure` coordinator.
2. Complete a same-company/task/agent explicit Retry linked to that run.
3. Release the task's old execution lock and schedule a workspace
selection.
4. Run startup or ordinary retry recovery. Observe the old retry remain
scheduled and the selection fail with an unfinished-recovery conflict.

**Paperclip version or commit**

Regression reproduced against `644937c931`. The current repair is based
on refreshed master `60b8089a44`.

**Deployment mode**

Native Runner with remote sandbox workspaces. The reported runtime used
ACPX Claude with per-turn lifecycle. The original provider
session-resume rejection is not independently reproduced or claimed
fixed here; this PR addresses the subsequent stranded recovery.

Related: #17839 records preservation when restart classification becomes
terminal. This change handles the earlier lock-mismatch return and
ordinary retry admission after a completed explicit successor. It uses
the same preservation service and does not require that PR.

## What Changed

- Share a narrow superseded-retry settlement between startup recovery
and the ordinary retry sweep.
- Require a failed source with no coordinator owner or process, its
exact prepared source lease, and a completed linked successor under the
same company, task and agent.
- Atomically retire replay and register preservation. Do not alter task
state or create another provider run.
- Add PostgreSQL lifecycle/safety regressions, a real-file preservation
and workspace-selection regression, and execution/map documentation.

## Verification

- Red: both startup and ordinary admission regressions left the old
coordinator in `retryable_failure` with no preservation obligation.
- Green: the same two cases retire the retry and retain the exact lease
without another run or task mutation.
- The assembled PostgreSQL/filesystem regression passes: workspace
selection remains blocked before preservation, the existing service
saves `saved.txt` and preserves newer local work, then the normal
selection guard applies the pending shared workspace.
- All 90 native retention/resumption cases pass. Three neighboring
startup-recovery cases pass, including the blocked-owner inventory. Full
recursive typecheck and full build pass at runtime head `23ddb213b4`;
final `19d7738ae3` only moves the function comment into execution
documentation. Map, module-boundary and diff checks pass. The duplicate
full local Vitest run was stopped after 20 minutes in its first long
general shard once the complete current-head hosted test gates passed;
no complete local-suite pass is claimed.
- Current-head CI has 53 passing checks and two intended Storybook
skips, including full typecheck, all test shards, build, Runner
verification, browser shards and both aggregate gates. The separate
`commitperclip PR Review` job is still queued on `ubuntu-latest` with no
assigned runner; its outcome remains pending. Greptile reviewed exact
head `19d7738ae3` at 5/5, with zero unresolved threads.
- Live acceptance passes on exact final source `19d7738ae3`: a
disposable Daytona Linux sandbox, the current immutable staging fleet
snapshot, SDK 0.203.0, a Darwin arm64 source host and Node 26.4.0. The
real native workspace preparation/export and provider stop/start paths
preserve an unpredictable report and newer host files. The ordinary
workspace-selection guard stays blocked until preservation commits, then
applies the pending shared workspace.
- The old workload's start count and side-effect marker each remain one.
Recovery creates no new run or native result. The sandbox finishes
stopped and is then deleted by the probe; a final provider read confirms
it is absent.
- A second live acceptance also passes on the original runtime's older
immutable snapshot with the source explicitly archived before recovery.
It verifies cold source reopening, the same report/newer-file checks,
one workload start and side effect, pending workspace application, and
confirmed deletion. Its initial probe attempt used immediate
archive/deletion reads and failed during asynchronous cleanup
observation; bounded provider-state polling fixed the probe without a
product change. The abandoned probe allocation is independently
confirmed absent.
- Scope: database fixtures represent the already-failed run and
completed explicit successor. The old workload is a persistent shell
process with observable file/side-effect markers, not a paid Claude
turn. This qualifies the repaired recovery handoff and real provider
preservation; it does not reproduce the initial ACPX session-resume
rejection.
- The original hosted task has only been inspected read-only. No rollout
or original-task recovery is claimed.

## Risks

- Incorrect successor classification could retire legitimate work.
Matching requires the server-persisted explicit Retry link, same
company/task/agent, later successful committed execution, no current
source execution lock, no recorded process, no coordinator owner, and no
workspace finalization owner.
- Retirement is not a stop receipt. The exact source remains retained,
unknown effects remain unknown, and workspace switching still waits for
the existing worker's stop and file-persistence proof.
- A failed preservation transaction rolls back retirement. No new scan,
retry budget, schema or public API is introduced.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, tool use and code execution.
The host does not expose a more specific model ID or the context-window
size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass — focused suites and live
acceptance; full-suite status above
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green — separate template-review job
still queued as noted above
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups —
exact head `19d7738ae3`
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-28 15:15:19 -05:00
DottaandPaperclip 60b8089a44 fix(runner): trust managed Cloud sandbox images (#18066)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Cloud selects and updates the sandbox image used by its agents.
> - Runner admission also required saved qualification for the exact
snapshot and configuration.
> - An image update left the old record stale and stopped work before
runtime startup.
> - This pull request trusts the image selected by Cloud and uses the
real runtime startup check.
> - Agents can continue after an image update without an operator
running a separate qualification test.

## Linked Issues or Issue Description

**What happened?**

A managed Cloud image update could cause
`sandbox_snapshot_qualification_required` before provider work began.
Runner discovery also fell back to Legacy when saved platform
qualification was absent. The agent Test action could require a separate
qualification request even when discovery already offered Paperclip
Runner.

**Expected behavior**

A managed Cloud image can start without a saved qualification record.
Runtime startup and the handshake report actual compatibility failures.
Custom images keep their existing qualification rules.

**Steps to reproduce**

1. Use Paperclip Runner on a Paperclip-managed Cloud sandbox.
2. Save qualification for its current snapshot.
3. Update the platform-selected snapshot and leave the old record in
place.
4. Start a task. Before this fix, admission rejects the stale record
before starting the provider.

Related work: Refs #17445, Refs #17724, Refs #17448. These changes cover
saved-computer qualification and setup tests. This fix removes the
qualification prerequisite only for managed Cloud images.

## What Changed

- Use one managed-image policy in runner selection and lease admission.
Require the active Cloud configuration to provision the provider. Active
captured custom images are excluded.
- Use the current Cloud image and ignore missing, stale, revoked or
valid saved qualification records for that image.
- Reuse the existing provisioned-runner selection path. Keep adapter
availability checks and the Legacy choice for managed sandboxes.
- Read custom-image metadata directly during discovery without resolving
provider credentials.
- Use the existing template-matching rule for captured images. Ignore
outdated captures, preserve qualification for matching custom captures,
and fall back to Legacy discovery for malformed saved capture config.
- Skip the separate qualification request when discovery already offers
Paperclip Runner as the default. Test checks the actual runtime.
- Add regressions for image updates, provider failures, custom images,
self-hosted environments and company access. Update the development and
verification guides.

## Verification

- Before the fix, managed-image discovery regressions returned Legacy,
and the rendered Test action called the separate qualification endpoint.
- The original runtime source fails four of the five managed-image
regression cases. The fixed runtime passes all five, including provider
startup error propagation. The baseline check uses the original module
source through a temporary Vitest transform and the same database-backed
tests.
- All 603 focused tests pass: 231 runner selection, 185 environment
runtime, 10 snapshot qualification, 168 rendered agent form and nine
form source controls. Discovery controls cover unavailable credentials,
stale managed markers without an active provisioner, outdated captures,
matching custom captures and malformed saved config. The
outdated-capture regression fails before the fix and passes afterward.
- `node scripts/check-maps.mjs` and `pnpm check:token-gates` pass.
- Full `pnpm -r typecheck` and `pnpm build` pass. All five focused files
passed together on `8275bbe72bb4d91fb3a02fb0658f0846b2abc966`
(`codex/simplify-managed-runner-readiness`, Node 24.19.0, macOS ARM64).
- The full local `pnpm test:run` suite is still in progress. Hosted CI
is waiting at `ci / gate / Select trusted runner`; the separate `review`
workflow is queued. Greptile is 5/5 on the current head, and both review
threads are resolved. This PR is not yet verified by full CI.
- Live fixed-source Daytona acceptance is not verified. This workspace
has no Daytona API key or image configuration. The earlier deployed
recovery is not evidence for this source change.

## Risks

- Managed Cloud now trusts its selected image. A bad image can fail at
real runtime startup instead of a saved qualification gate.
- Company access, credentials, runtime integrity and handshake checks
still apply. Self-hosted sandboxes, custom environments and active
captured custom images keep their qualification and immutable snapshot
binding.
- No schema change or data migration is required. Existing qualification
records can remain in place.

## Model Used

- OpenAI Codex, GPT-6 family, with reasoning, tool use and code
execution. The exact model ID and context window are not exposed in this
session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-28 14:39:26 -05:00