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Commits
| Author | SHA1 | Message | Date | |
|---|---|---|---|---|
 Nicky LeachandPaperclip
|
38d8f37172 |
fix(build): enforce Node 24 across Paperclip (#11792)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Paperclip runs across the CLI, server, adapters, plugins, CI, and container images. > - These surfaces declared different Node.js versions from 20 through 24. > - A newer `@types/node` major can expose APIs that the supported runtime does not provide. > - Node.js 20 is no longer a suitable project baseline, and Node.js 24 is the current LTS line. > - This pull request sets Node.js 24.11.0 as one repository-wide baseline, adds a drift check, and gives users actionable startup guidance when their runtime is too old. > - The benefit is one clear runtime contract for development, release, installation, and published packages. ## Linked Issues or Issue Description Refs #2734 Refs #11727 Refs #739 ## What Changed - Require Node.js 24.11.0 or newer in all 42 package manifests and runtime checks. - Use Node.js 24 in GitHub Actions, Docker images, smoke images, sandbox setup, portable installs, and esbuild targets. - Align every direct `@types/node` declaration on `^24.0.0`. - Prevent Dependabot from opening major `@types/node` upgrades without a matching runtime decision. - Add `.nvmrc` and a CI policy check for Node version drift. - Update ACP version gates, tests, and user documentation for the new minimum. - Print a non-blocking warning on CLI and server startup when Node is unsupported, with remediation through a version manager or the documented downloaded `install.sh` workflow. - Deduplicate that warning when `paperclipai run` boots the CLI and server in the same process. ## Verification - `node scripts/check-node-version-policy.mjs` - `node --check scripts/check-node-version-policy.mjs` - `node --check cli/esbuild.config.mjs` - `node --check scripts/generate-npm-package-json.mjs` - `bash -n scripts/install.sh scripts/test-install-sh-docker.sh scripts/e2e-install-lifecycle.sh` - Parsed all 42 package manifests and confirmed `engines.node` is `>=24.11.0`. - `git diff --check` - `vitest run packages/adapter-utils/src/sandbox-install-command.test.ts` passed with 3 tests. - `vitest run cli/src/node-version.test.ts` passed with 4 tests. - Directly exercised the shared warning helper for unsupported-version messaging and same-process deduplication. - The focused exe.dev suite could not resolve the locally unbuilt plugin SDK from this isolated worktree. A full offline workspace install was also blocked because the package-manager signature verifier requires registry access. The full suite was not run locally; draft CI performs a clean install and evaluates the wider impact. ## Risks - This is a breaking runtime change for users, plugins, and deployments that still use Node.js 20 or 22. - Published workspace packages will now produce an engine warning or failure in strict package managers on older Node.js releases. - Node.js 24 can reveal dependency, native module, Playwright, or agent CLI compatibility issues in CI. - The bootstrap installer now installs Node.js 24 when the current runtime is older than 24.11.0. - The portable sandbox fallback is pinned to Node.js 24.11.0 and depends on that upstream tarball remaining available. - Unsupported runtimes continue booting after a warning, so a later incompatibility can still fail at its point of use. - The CLI and server share the warning policy through the published `@paperclipai/shared` package; packaging checks must keep that subpath export available. - This PR does not commit `pnpm-lock.yaml` because repository policy assigns lockfile generation to CI. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex based on GPT-5. The exact deployment ID and context window are not exposed in this session. Reasoning, repository tools, shell execution, and GitHub tools were enabled. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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|
Nicky LeachandPaperclip
|
33eb68b3ae |
fix(server): end the duplex route on the pre-bind bounds when frames arrive before the bind (#11860)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The host and a plugin worker talk over a duplex channel route with bounds on buffered frames and total bytes > - A worker can batch its data and exit frames with the open reply, so those frames arrive before the route binds and before a listener attaches > - Two of the route bounds did not hold on that pre-bind path: a shared limit let the pre-open hold swallow an over-limit frame before the buffered-frame bound could end the route, and the route end discarded chunks a later listener still needed > - This pull request gives the pre-open hold its own ceiling above the buffered bound, and keeps the buffered chunks across a route end > - The benefit is a duplex route that enforces its bounds and preserves valid data, even when a worker batches frames ahead of the bind ## Linked Issues or Issue Description No existing GitHub issue covers this. Filing it directly here, following the bug report template. **What happened?** Two duplex channel route bounds in `server/src/services/plugin-worker-manager.ts` did not hold when the data and exit frames arrived in the open-reply read batch, before the route bound: - The pre-open hold and the pre-bind buffered-frame bound shared one limit. When a caller lowered the buffered bound, the hold dropped the overflow frame as a protocol error before the buffered bound could end the route, so the route never ended. - The route end discarded the buffered chunks. A frame can end the route during the replay, before a listener attaches, and the chunks the host accepted before that frame are valid data. **Expected behavior** The pre-open hold uses its own ceiling, above the buffered bound, so the replay after the bind lets the buffered bound end the route. A route end keeps the buffered chunks so a listener that attaches after the end still drains them. **Steps to reproduce** 1. Open a duplex channel where the worker batches several data frames with the open reply. 2. Lower `maxPreBindBufferedFrames` below the batch size. 3. Observe the route fails to end on the buffered-frame bound, or a listener that attaches after an end-during-replay never receives the chunks buffered before that end. **Paperclip version or commit** `933749e01f74e82ce5d315c071be534d04e01158` **Deployment mode** Local dev (`pnpm dev`) and server unit tests. **Agent adapter(s) involved** None — this is host/plugin-worker transport infrastructure, not adapter-specific. **Database mode** Not database-related. **Access context** Any board or agent path that runs a plugin worker over a duplex channel route. ## What Changed - Give the pre-open frame hold its own ceiling (`MAX_DUPLEX_CHANNEL_PRE_OPEN_HOLD_FRAMES`), separate from the pre-bind buffered-frame bound, so lowering the buffered bound still ends the route instead of being pre-empted by the hold. - Keep the buffered chunks on a route end instead of discarding them, so a listener that attaches after an end-during-replay still drains the data the host already accepted. - Add two regression tests that batch frames with the open reply, so both bounds run through the pre-bind path deterministically. ## Verification - `cd server && npx vitest run src/__tests__/plugin-worker-manager-duplex.test.ts` — 24/24 tests pass, including the two new regression cases. ## Risks Low risk. This only changes bound bookkeeping on an internal transport path (frame hold ceiling and end-time buffer retention); it does not change the wire protocol or any public API. The new ceiling is a constant above the existing buffered bound, so pre-open holds are still capped. ## Model Used Claude, Sonnet 5 (claude-sonnet-5); assisted with repository-grounded diff review and drafted this PR description from the commit and code history. No functional code in this PR was authored by Claude — the fix itself is Priya Raman's, preserved with original authorship intact. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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|
Nicky LeachandPaperclip
|
9af1e75629 |
fix(server): handle the runtime service exit persist when a parent row is gone (#11861)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - A runtime service (e.g. a dev server an agent started) runs as a child process tracked against a project row > - When that child exits on its own, the host records its terminal status in the database as a detached, best-effort persist > - A caller can delete the project (or company) while the child still runs, so the `project_id` foreign key rejects that persist, and the detached write had no error handler, turning the rejection into an unhandled crash > - This pull request wraps the exit-time persist in a try/catch and logs the failure instead of crashing the host > - The benefit is a host that survives a project deleted out from under a still-running runtime service, instead of taking down the whole process on an unrelated cleanup ## Linked Issues or Issue Description No existing GitHub issue covers this. Filing it directly here, following the bug report template. **What happened?** `registerRuntimeService`'s child `exit` handler in `server/src/services/workspace-runtime.ts` runs a detached, unawaited persist of the terminal service status. If the parent project row was deleted while the service was still running, the `project_id` foreign key rejects the write. The detached persist had no error handler, so the rejection surfaced as an unhandled promise rejection and could crash the host. **Expected behavior** The exit-time persist is best effort: every error inside it is caught and logged, so a foreign-key rejection (or any other persist failure) never crashes the host. **Steps to reproduce** 1. Start a runtime service tied to a project. 2. Delete the project (or company) while the service is still running. 3. Let the child process exit on its own. 4. Observe the detached persist throws an unhandled foreign-key error. **Paperclip version or commit** `933749e01f74e82ce5d315c071be534d04e01158` **Deployment mode** Local dev (`pnpm dev`) and server unit tests (embedded Postgres). **Agent adapter(s) involved** None — this is runtime-service lifecycle infrastructure, not adapter-specific. **Database mode** Embedded/managed Postgres — the fix concerns the `project_id` foreign key on the runtime-service table. **Access context** Any board or agent path that starts a runtime service (e.g. a dev server) tied to a project that can later be deleted. ## What Changed - Wrap the exit-handler's `cleanupRecordExposure` / `removeLocalServiceRegistryRecord` / `persistRuntimeServiceRecord` sequence in a try/catch; log a warning on failure instead of letting the rejection escape. - Terminate real child processes in the embedded-postgres test teardown before the row deletes, so a left-over child does not exit later and write a row that references an already-deleted project. ## Verification - `cd server && npx vitest run src/__tests__/workspace-runtime.test.ts` covers the new exit-persist-after-parent-delete regression case. This suite spins up embedded Postgres and did not finish inside this review's local time budget, so I did not confirm a local pass — deferring to CI, which runs it as part of the normal server test job. ## Risks Low risk. The change only adds error handling around an existing best-effort, detached persist — it does not change the happy-path behavior or the persisted schema. A persist failure is now logged instead of crashing the host, which is strictly safer. ## Model Used Claude, Sonnet 5 (claude-sonnet-5); assisted with repository-grounded diff review and drafted this PR description from the commit and code history. No functional code in this PR was authored by Claude — the fix itself is Priya Raman's, preserved with original authorship intact. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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|
Nicky LeachandPaperclip
|
b83e14ad2c |
fix(runtime): stop the readiness probe from stealing the guest exposure port (#11788)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The workspace runtime starts guest processes and exposes their ports. > - The readiness wait bound the guest port to test whether it was ready. > - That bind could take the port before the guest process used it. > - This pull request reads listener state without a competing bind and recovers from a real port collision. > - The benefit is stable runtime exposure and a clear recovery path for a genuine collision. ## Linked Issues or Issue Description **What happened?** The managed HTTPS exposure test failed intermittently with `listen EADDRINUSE` on `127.0.0.1:42000`. The readiness wait bound the guest port before the guest process could bind it. **Expected behavior** The readiness wait must not hold the guest port. The runtime must recover when an external process owns the assigned port. **Steps to reproduce** 1. Run `npx vitest run server/src/services/workspace-runtime-exposure.test.ts` from the repository root. 2. Inject a delayed guest bind and a widened readiness-probe hold. 3. Observe the port collision before this fix and the successful retry after this fix. **Paperclip version or commit** `b375bbd913cb2edc8e077f4339ce0745e53bd462` **Deployment mode** Built from source with the server test suite. **Installation method** Built from source with pnpm. **Agent adapter(s) involved** Not adapter-specific. This is a core runtime test. **Database mode** Not database-related. **Relevant logs or output** Before this fix, the test reported `listen EADDRINUSE: address already in use 127.0.0.1:42000`. ## What Changed - Read listener presence from `/proc` on Linux instead of binding the guest port. - Keep the bind probe as the fallback on non-Linux hosts. - Capture the current port owner when an exposed guest exits with `EADDRINUSE`. - Quarantine the app and HMR pair, then allocate the next free port pair within the existing range. - Add a deterministic regression test for quarantine, re-allocation, and self-diagnosis logging. ## Verification - Run `npx vitest run server/src/services/workspace-runtime-exposure.test.ts` from the repository root. - The target suite passes 19 tests locally. - The related runtime suites pass 105, 128, and 21 tests locally. - Run `tsc -p server/tsconfig.json` to check the changed server files. - CI must pass the general server shard and all required checks. - Greptile must report 5/5 with no open P2 comments, recommendations, or follow-ups. ## Risks The Linux readiness path now depends on `/proc` listener data. Non-Linux hosts retain the existing bind-probe fallback. The port range and allocation limit do not change. ## Model Used OpenAI GPT-5. This agent used tool calls for repository checks and GitHub PR management. Priya Raman authored the code change. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandClaude Opus 5
|
a9d1f740f0 |
fix(workspaces): seed managed worktrees when the base checkout has no config (#11752)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work
> - Agents do that work in isolated git worktrees, and a managed
worktree runs its own Paperclip instance with a cloned database
> - That clone needs a seed source, and the source must come from
server-owned registration, never from state the workspace itself can
rewrite
> - The seed-source resolver requires the registered base project
workspace to hold its own `.paperclip/config.json`
> - A managed project workspace is a plain `git clone`, and no code
writes that file into it
> - Every isolated worktree provision, deferred seed, and workspace
repair therefore fails on a managed checkout
> - This pull request lets a named source supply the config when the
base checkout has none
> - The benefit is that managed worktrees provision again, and the seed
source stays server-owned
## Linked Issues or Issue Description
No public GitHub issue exists for this problem. It is described below.
**What happened?**
Agent runs that need an isolated worktree fail during provisioning. The
provision command exits with this error (paths redacted):
```
Execution workspace provision command "bash ./scripts/provision-worktree.sh" failed:
Registered base project workspace has no canonical Paperclip config:
<instance-home>/instances/default/projects/<company-id>/<project-id>/<repo>/.paperclip/config.json
```
`resolveRegisteredWorktreeSeedSource` sets `registeredConfigPath` to
`<baseCwd>/.paperclip/config.json` whenever the caller names a
registered base workspace. It then requires that file to exist.
`scripts/provision-worktree.sh` applies the same rule.
A managed project workspace never has that file.
`materializeManagedProjectWorkspace` creates it with `git clone` and a
rename, so the checkout holds repository content only. The control plane
keeps its config at `<home>/instances/<id>/config.json` instead.
The failure reaches three paths: worktree provisioning, deferred seeding
through `worktree ensure-seeded`, and workspace repair.
The behavior changed in #11671. That pull request replaced a fallback
chain with a single hard requirement. Fixture code in
`scripts/__tests__/provision-worktree-self-heal.test.mjs` writes a
config into the fake base workspace, so tests kept passing.
**Expected behavior**
A managed worktree provisions and seeds from the registered source. The
seed manifest still never selects that source.
**Steps to reproduce**
1. Register the Paperclip repository as a project with a `repoUrl`, so
the server materializes a managed checkout.
2. Assign an issue to an agent whose workspace strategy is
`git_worktree`.
3. Watch the workspace operation log for the provision command.
4. The command exits non-zero with the error above.
**Paperclip version or commit**
Reproduced on `master` at
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Nicky LeachandPaperclip
|
5a1ce7aed8 |
fix(server): stamp built commit into service.version (#11748)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The server emits OpenTelemetry spans so operators can trace agent work > - Each span needs a service version that identifies the code that produced it > - The current service version comes from a static environment value and can become stale after a rebuild > - This pull request records the built commit and resolves the service version from the build stamp, runtime Git, the environment, or an unknown fallback > - The benefit is trace data that identifies the correct built commit during development and deployment ## Linked Issues or Issue Description **What happened?** The server used a static `OTEL_SERVICE_VERSION` value for every OpenTelemetry span. Rebuilds could produce traces with an old commit value. **Expected behavior** The server should report the built commit when a build stamp exists. It should use runtime Git, the environment value, or `unknown` as fallback. **Steps to reproduce** 1. Set `OTEL_SERVICE_VERSION` to an old commit value. 2. Build the server at a different commit. 3. Start the server and inspect the OpenTelemetry service version. 4. Confirm that the built commit takes precedence over the old environment value. ## What Changed - Add a build script that writes the short Git commit to `dist/build-info.json`. - Resolve `service.version` from the build stamp, runtime Git, the environment, or `unknown`. - Log the resolved service version once during server startup. - Add tests for the resolution order and safe behavior without Git. - Document the resolution order in `doc/observability.md`. ## Verification - `pnpm --filter @paperclipai/server build` - `npx vitest run server/src/__tests__/service-version.test.ts` - `pnpm --filter @paperclipai/server typecheck` - Confirm that the build stamp contains the short commit. - Confirm that the stamp wins over the environment value. - Confirm that a build without Git exits successfully without a stamp. ## Risks The server now prefers the built commit over `OTEL_SERVICE_VERSION`. A build without Git uses the existing environment value or `unknown`. The change needs no schema migration and has a single-commit rollback path. ## Model Used OpenAI Codex, GPT-5, tool use and code execution. The runtime does not expose the context window size or reasoning mode. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
7c8064da1b |
test(runtime): assert order-independent port invariants for concurrent siblings (#11754)
## Thinking Path > - Paperclip manages work for AI agents. > - The workspace runtime starts isolated services for concurrent workspaces. > - A runtime test assumed that one concurrent lane always received the base port. > - The allocator guarantees distinct ports, but scheduling decides which lane receives the base port. > - This pull request changes the test to assert allocator guarantees without lane-order assumptions. > - The benefit is a stable test that still checks the complete bounded port range. ## Linked Issues or Issue Description **What happened?** The concurrent sibling workspace runtime test failed intermittently because it assumed array index 0 received the base port. **Expected behavior** The test must accept either lane as the base-port owner while it checks the allocator invariants. **Steps to reproduce** 1. Start two isolated workspace runtimes with `Promise.all`. 2. Force the second lane to start first. 3. Run the old assertions. 4. Observe that the test expects the wrong lane to receive the base port. **Paperclip version or commit** This change targets the current `master` branch. **Deployment mode** Built from source test suite. **Installation method** Built from source with pnpm. **Database mode** Not database-related. ## What Changed - Replace lane-order assertions with order-independent port invariants. - Assert distinct ports, the base lower port, and the bounded upper port. - Keep concurrent startup, service URL checks, and persisted-row checks. ## Verification - The target test passed 12 consecutive runs. - The full test file passed 128 of 128 tests. - Both forced lane orderings passed with the new invariants. - TypeScript reported no errors in the changed file. - CI will run after this pull request opens. ## Risks Low risk. This pull request changes one test file and does not change runtime code. ## Model Used OpenAI Codex, GPT-5, tool use and code execution enabled. The model reviewed and prepared the pull request metadata. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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faab2620ad |
feat(sandbox): add a duplex transport for Daytona behind a default-off kill switch (#11750)
## Thinking Path > - Paperclip is an open source app that manages AI agents for work > - Paperclip runs agents in local and remote sandbox environments > - A sandbox needs a bounded channel for commands and asynchronous input > - Daytona needs a real pseudo-terminal transport for this channel > - The sandbox gateway also needs a mode that handles channel loss safely > - This pull request adds the Daytona transport and gateway mode behind a default-off kill switch > - The benefit is a tested foundation for later transport selection ## Linked Issues or Issue Description **Subsystem affected** Cross-cutting (multiple of the above): sandbox providers, plugin SDK, server settings, and shared types. **Problem or motivation** The merged sandbox protocol has no runtime transport for Daytona. The generated sandbox gateway also has no duplex mode. A later transport-selection change needs both parts and a safe per-run gate. **Proposed solution** Add a Daytona `duplexCommandStream` transport over a raw pseudo-terminal. Add a generated gateway mode named `duplex_v1`. Add the `enableSandboxDuplexBridge` setting with a default value of `false`. Keep transport selection disabled until a later pull request. **Alternatives considered** Keep the protocol unused until the transport-selection change. This would delay provider tests and leave the gateway path without direct coverage. **Roadmap alignment** This change supports the completed Roadmap item for cloud and sandbox agents. It extends the merged sandbox channel foundation in pull request #11738. **Additional context** The Daytona provider remains an untrusted boundary. Deployments must use least-privilege provider credentials and provider-side quota controls. Operators must name an owner for duplex telemetry retention before rollout. ## What Changed - Add the Daytona `duplexCommandStream` capability over a raw pseudo-terminal. - Add a launch wrapper that disables echo and newline translation for NDJSON frames. - Close channels on lease release, destroy, resume of a stopped worker, and worker shutdown. - Declare the capability in the Daytona manifest and set `PLUGIN_VERSION` to `0.1.5`. - Add the worker-to-host notification sink at `ctx.duplexChannel.data` and `ctx.duplexChannel.exit`. - Add the generated sandbox gateway mode `PAPERCLIP_API_BRIDGE_MODE=duplex_v1`. - Add channel-loss results of `409 outcome_indeterminate` and `503 bridge_unavailable`. - Add the per-run setting `enableSandboxDuplexBridge`, with a default value of `false`. - Add unit tests, generated-source codec tests, lifecycle tests, and a credential-gated live Daytona test. ## Verification - Daytona suite: 185 tests pass. - Adapter utilities: 754 tests pass and 4 tests skip. - Plugin SDK: 62 tests pass. - Shared package: 28 tests pass. - Server duplex tests pass. - Shared, plugin SDK, server, and Daytona TypeScript checks pass. - The live Daytona test passes 3 cases when `DAYTONA_API_KEY` is set. - The live Daytona test skips 3 cases without `DAYTONA_API_KEY`. - CI must run the full workspace typecheck, test, and build gates after PR creation. ## Risks - The Daytona control plane and pseudo-terminal remain untrusted boundaries. - The duplex gateway changes behavior only when the mode and per-run setting enable it. - A lost channel fails requests without replay, so callers must handle indeterminate outcomes. - The transport-selection change must require both `duplexCommandStream === true` and `enableSandboxDuplexBridge === true`. - The provider credential and quota limits need operator control before rollout. ## Model Used OpenAI Codex, GPT-5, tool use and code execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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|
Nicky LeachandPaperclip
|
d5416fde9a |
fix(runtime): route sandbox git-bundle export through native syncOut (#11749)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Sandbox-managed runtimes move files between a host and an isolated sandbox > - The git-bundle export path reads the full bundle into host memory > - The workspace restore path already uses the provider native `syncOut` transfer > - This pull request uses `syncOut` for bundle export and keeps `readFile` as a fallback > - The change reduces host buffering and exposes the transfer to provider tracing ## Linked Issues or Issue Description **What happened?** The sandbox git-bundle export used `client.readFile` even when the provider supported native `syncOut`. The path buffered the full bundle in host memory and used a chunked base64 command loop. **Expected behavior** The export should use one confined native file transfer when the provider supports `syncOut`. Providers without that capability should keep the existing `readFile` fallback. **Steps to reproduce** 1. Prepare a sandbox-managed runtime with native `syncOut` support. 2. Export the sandbox git bundle. 3. Inspect the sync operations and file reads. 4. Confirm that the bundle uses one native file mapping and that the status file still uses `readFile`. **Paperclip version or commit** Commit `3fc88d14be7133867897e87838276e15aba675fd`. **Deployment mode** Built from source. The change applies to sandbox-managed runtime execution. **Additional context** This PR contains a focused bug fix. No public issue matched this change during the duplicate search. ## What Changed - Route bundle export through `nativeSyncOut` when the provider supports it. - Keep the existing `readFile` fallback for providers without native sync support. - Confine the native bundle mapping with `assertSyncOperationsConfined`. - Cover the native path, fallback path, retry path, and confinement checks with unit tests. ## Verification - `npx vitest run packages/adapter-utils/src/sandbox-managed-runtime.test.ts` — 52 tests passed. - `npx tsc --noEmit` in `packages/adapter-utils` — passed. - The PR CI workflow must pass before merge. ## Risks Low risk. The native path runs only when the provider advertises `syncOut`. The existing `readFile` path remains available as a fallback. Native transfer progress reports only start and finish events. ## Model Used OpenAI GPT-5 Codex. Exact runtime model ID: GPT-5 Codex. Context window: not exposed in this run. Capabilities used: code review, shell tools, GitHub CLI, and Paperclip API coordination. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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|
Nicky LeachandPaperclip
|
b8a76081ec |
feat(environments): expose boot-relevant drift attribution in the custom-image overview (#11751)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Paperclip lets operators prepare and use custom images for sandbox environments > - The custom-image overview detected drift but did not show which boot source changed > - Operators need the changed field and values to understand why a template no longer matches > - This pull request adds safe drift attribution to the overview API and the out-of-sync banner > - The benefit is faster diagnosis without exposing secrets or internal snapshot data ## Linked Issues or Issue Description **Subsystem affected** Cross-cutting (server and UI). **Problem or motivation** The custom-image overview reported drift without identifying the changed boot source. Operators had to inspect other data to find the cause. **Proposed solution** Return a classified drift summary with changed paths and their prior and current values. Show the boot-source field in the UI banner. Keep legacy templates and unclassified drift on the generic message. **Alternatives considered** The change does not expose the full snapshot or fingerprint. This keeps the overview contract small and avoids secret disclosure. **Roadmap alignment** The change supports the existing custom-image environment workflow and does not duplicate a roadmap item. ## What Changed - Add `activeTemplateDrift` to the custom-image overview response. - Classify drift as `boot_source_drift`, `knob_only`, or `unclassified`. - Return drifted paths with safe `from` and `to` values. - Show the changed boot-source field and values in the out-of-sync banner. - Keep legacy templates fail-closed and exclude secrets, fingerprints, and raw snapshots. - Add server and UI tests for the new behavior. ## Verification - `npx vitest run server/src/__tests__/environment-custom-images-service.test.ts` passes with 27 tests. - `npx vitest run ui/src/pages/CompanyEnvironments.test.tsx` passes with 27 tests. - `pnpm --filter @paperclipai/ui exec tsc --noEmit` passes. - Review the overview response and banner cases for boot-source, knob-only, and legacy drift. ## Risks The overview response gains one optional field. Legacy templates remain compatible because they return `unclassified` and keep the generic banner. The service excludes secret values, fingerprints, and raw snapshots. ## Model Used OpenAI Codex, GPT-5, tool use and code execution enabled. The model reviewed the handoff and managed the pull request. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [ ] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
8161244284 |
feat(sandbox): add opt-in duplex command-stream foundation (capability, protocol, bounded host route, frame codec) (#11738)
## Thinking Path > - Paperclip provides a control plane for companies that run AI agents. > - Sandboxed agents need a safe execution path for persistent command streams. > - The existing callback transport does not provide a bounded, generic duplex route. > - The host must control capability access, route identity, protocol limits, and close behavior. > - This pull request adds an opt-in duplex command-stream foundation across the sandbox layers. > - The feature stays inert because no current provider declares the capability. ## Linked Issues or Issue Description **Subsystem affected** Cross-cutting (multiple of the above) **Problem or motivation** Sandbox command execution needs a persistent host-to-sandbox stream. The current callback bridge uses a file transport and does not provide this generic route. **Proposed solution** Add a fail-closed provider capability, generic worker protocol messages, a host-owned bounded route, cross-layer service mediation, and a versioned newline-delimited frame codec. **Alternatives considered** Keep the file transport and add feature-specific commands. This does not provide one reusable duplex contract or host-owned route bounds. **Roadmap alignment** This work supports the completed Cloud / Sandbox agents roadmap area and the safe autonomy goal in the product definition. **Additional context** The change passed a two-stage security review. The final code review verdict was approve after fixes for active-stream bounds and service-layer capability mediation. ## What Changed - Add the opt-in `duplexCommandStream` provider capability with fail-closed narrowing. - Add duplex open, write, stop, and close requests and data and exit notifications to the plugin worker protocol. - Add a host-owned route with bounds for chunk size, cumulative bytes, lifetime, protocol errors, pending requests, and pre-bind buffering. - Add close acknowledgement handling with worker retirement when the close remains unconfirmed. - Wire `openDuplexChannel` through the execution target, runtime service, and plugin worker. - Add a versioned frame codec with shared wire-compatibility vectors and split UTF-8 handling. ## Verification - `server/src/__tests__/plugin-worker-manager-duplex.test.ts` passes 18 tests. - `server/src/__tests__/environment-execution-target-duplex.test.ts` passes 11 tests. - `packages/adapter-utils/src/duplex-frame-codec.test.ts` passes 38 tests. - `server/src/__tests__/sandbox-capability-contract.test.ts` passes 15 tests. - Setup-token pseudo-terminal regression tests pass 47 tests. - Server TypeScript check passes. - Continuous integration will run the full required test, typecheck, build, and policy checks. ## Risks - Providers that opt into the capability must implement the complete worker protocol. - Route limit defaults can close a stream when a workload exceeds the configured bounds. - The capability remains disabled for current providers, so current production behavior does not change. ## Model Used OpenAI GPT-5 (`gpt-5`), with tool use and code execution. The model reviewed and prepared this pull request from the supplied implementation and verification record. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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|
Nicky LeachandPaperclip
|
e0e503e1bc |
fix(server): make blockers-resolved wake dedup level-triggered (#11732)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Paperclip uses issue dependencies to pause work until blockers reach a ready state. > - A blocked issue with several blockers can miss its wake when the final blocker completes. > - The wake deduplication used a historical per-edge key, so an old completed wake hid the current ready state. > - This pull request adds a level-triggered key for the sorted set of blocker issue ids and uses one helper for all wake paths. > - The benefit is that the final blocker wake can repair a missed wake, while repeated reconciliation stays bounded. ## Linked Issues or Issue Description Refs #8009, #7853, and #6719. These public pull requests cover related dependency-wake and deduplication behavior. This pull request fixes a separate multi-blocker state-key gap. **What happened?** A blocked issue with multiple blockers received no `issue_blockers_resolved` wake when the final blocker completed. An earlier completed per-edge wake suppressed the wake for the current all-ready state. **Expected behavior** The final blocker completion must emit one wake for the current ready state. A later reconciliation pass must not emit a second wake for the same state. **Steps to reproduce** 1. Create a blocked issue with at least two blocker issues. 2. Complete one blocker and record its completed per-edge wake. 3. Complete the final blocker. 4. Run the route-time or reconciliation wake path. 5. Confirm that one level-triggered wake exists for the sorted blocker set. **Paperclip version or commit** `eed1e5cad91a37547e1b521232da04b9ddb316f0` **Deployment mode** Local dev from source. ## What Changed - Add a SHA-256 level-triggered idempotency key from the sorted blocker issue ids. - Share one deduplication helper across route-time, finalize-time, and periodic wake paths. - Treat state-key rows with idempotent statuses as duplicates. - Treat legacy per-edge rows as duplicates only while they remain in flight. - Record skipped route-time wakes without suppressing later finalize-time or periodic wakes. - Add regression coverage for a completed earlier-blocker wake and a second reconciliation pass. ## Verification - Run `npx vitest run server/src/__tests__/issue-dependency-wakeups-routes.test.ts`. - Run `npx vitest run server/src/__tests__/heartbeat-issue-liveness-escalation.test.ts`. - Run `npx vitest run server/src/__tests__/heartbeat-dependency-scheduling.test.ts`. - Run `npx vitest run server/src/__tests__/issue-rewake-throttle.test.ts server/src/__tests__/recovery-stale-issue-lock-sweep.test.ts`. - Run `tsc --noEmit` on the touched files. ## Risks The change alters wake deduplication for dependency reconciliation. The new key uses the full sorted blocker set, so a change in that set permits a new wake. The regression tests cover the missed-final-blocker case and repeated reconciliation. ## Model Used OpenAI Codex, GPT-5, tool-use model with code execution and repository review support. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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|
Nicky LeachandPaperclip
|
233be4b36c |
feat: parallelize sandbox file-sync behind a provider opt-in capability (#11736)
## Thinking Path > - Paperclip runs AI agents through local and remote execution adapters. > - Sandbox providers move workspace and asset files before and after agent runs. > - Serial file transfers delay startup and teardown when several operations do not depend on each other. > - Providers need an opt-in contract so existing providers keep their serial behavior. > - This pull request adds a bounded scheduler and routes inbound and outbound sync operations through it. > - The benefit is shorter sandbox setup and teardown with stable errors, clear telemetry, and a safe opt-in path. ## Linked Issues or Issue Description **Subsystem affected** Cross-cutting (multiple of the above): packages/shared, packages/adapter-utils, packages/plugins, and server. **Problem or motivation** Sandbox sync processes the workspace, assets, and referenced projects in series. This adds avoidable wait time to agent startup and teardown. **Proposed solution** Add a fail-closed provider capability named concurrentSyncOperations. Use a bounded scheduler with a limit of four operations. Preserve operation order for error reporting. Keep non-opted-in providers on the serial path. **Alternatives considered** Increase the serial transfer speed or add provider-specific schedulers. Those options do not provide one shared contract or stable behavior across providers. **Roadmap alignment** ROADMAP.md lists cloud and sandbox agents as a product area. This change improves sandbox execution without changing the control-plane contract. **Additional context** The Daytona provider opts in. Board trials on this commit showed overlap for inbound sync and outbound restore, with no referenced-project staging failures. ## What Changed - Add the concurrentSyncOperations sandbox capability and fail-closed parsing. - Add a bounded settle-all scheduler with stable input-order errors. - Parallelize inbound workspace, asset, and referenced-project sync operations when the provider opts in. - Parallelize outbound workspace and asset restore operations when the provider opts in. - Surface referenced-project failure text in run logs and server telemetry. - Add Daytona sync spans and the capability declaration. - Preserve in-flight upload scratch tarballs during workspace wipe. - Add unit and regression tests for the scheduler, coordinators, provider behavior, telemetry, and wipe race. ## Verification - Run the adapter-utils and server type checks. - Run the targeted adapter-utils, server, and Daytona test suites. - Run the full automated sweep. - Review six cold Daytona trials, with three serial and three parallel runs. - Confirm that parallel trials show inbound overlap and outbound restore overlap. - Confirm that providers without the capability keep serial behavior. ## Risks - Providers must opt in only when their file operations can run safely at the same time. - A provider that declares the capability incorrectly can expose transfer races. - The scheduler keeps a limit of four to bound resource use. - Providers without the capability keep the prior serial behavior. ## Model Used OpenAI GPT-5 in the Codex runtime. The model used tool calls, code inspection, and GitHub workflow support. The model did not author the implementation commits. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with Fixes: # / Closes # / Refs # OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub #NNN / github.com/paperclipai/paperclip URLs) - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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|
Nicky LeachandPaperclip
|
e0b64529b3 |
feat(auth): normalize agent login in the sandbox onto one session table and a capability contract (#11730)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Sandbox agents need a safe login path for each supported adapter > - Codex device login and Claude setup-token login used separate session stores and route logic > - Separate stores made session lookup, expiry, and login capability checks harder to keep consistent > - This pull request unifies both flows on one session table and one capability contract > - The benefit is one company-scoped login model with public session identifiers and shared lifecycle rules ## Linked Issues or Issue Description **Subsystem affected** Cross-cutting (multiple of the above) **Problem or motivation** Codex and Claude sandbox login used separate session stores and different route paths. This split increased the risk of inconsistent company scoping, session lookup, and cleanup. **Proposed solution** Use `adapter_auth_sessions` for both login flows. Use public session identifiers for API access. Select login behavior from projected adapter capability data. Share the route spine, lease arguments, runner lifecycle, and reaper rules. **Alternatives considered** Keep two session tables and add matching fixes to both routes. This keeps duplicate logic and does not provide one capability contract, so this pull request uses shared infrastructure. **Roadmap alignment** This change supports the shipped Cloud / Sandbox agents milestone in `ROADMAP.md`. ## What Changed - Unify Codex device login and Claude setup-token login on `adapter_auth_sessions`. - Return and look up sessions with company-scoped public session identifiers. - Enforce one active session for each company, owner, and adapter. - Share the login route spine, sandbox lease arguments, runner lifecycle, and missing-auth check. - Add a standalone setup-token reaper with adapter-specific row selection. - Add optional login capability projection for adapters and drive route and UI selection from that data. - Rename the provider flag to `supportsLoginPty` and validate its deprecated alias. - Remove the old Claude setup-token session table and add the required migrations. ## Verification - Server typecheck passed with `tsc`. - Database typecheck passed. - UI typecheck passed with `tsc -b`. - Codex login service and route suites passed. - Setup-token session, route, and reaper suites passed. - Adapter session schema, plugin validator, capability projection, UI render, and Daytona suites passed. - GitHub Actions must confirm the complete CI gate after pull request creation. ## Risks - The migrations remove short-lived in-flight login rows during deployment. A login that spans the migration can continue until its provider lease expires. - The Codex credential store remains company-scoped. A cross-owner credential race remains a documented, board-accepted risk. - API clients that use internal session row identifiers no longer work. The API accepts only public session identifiers. ## Model Used Codex, GPT-5, exact runtime model ID not exposed in this handoff, large context window, reasoning, and repository tool use. The implementing engineer produced the code with AI assistance. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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|
Nicky LeachandPaperclip
|
8b2dbd9d87 |
chore(deps): open one dependabot PR per major update (#11709)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work.
> - Dependabot keeps the project dependencies current.
> - The npm update rule groups all major updates into one pull request.
> - One blocked major update can stop that grouped pull request.
> - This pull request gives each major update its own pull request.
> - The higher limit keeps the initial major updates and normal updates
visible.
## Linked Issues or Issue Description
**What happened?**
Dependabot grouped all npm major updates into one weekly pull request. A
blocked upgrade stopped the grouped pull request and hid other ready
updates.
**Expected behavior**
Dependabot should open one pull request for each npm major update.
**Steps to reproduce**
1. Read the npm entry in `.github/dependabot.yml`.
2. Run the weekly Dependabot update.
3. Inspect the pull requests for major npm updates.
**Paperclip version or commit**
`master` at the base commit for this pull request.
**Deployment mode**
Not applicable. This change affects repository configuration.
**Installation method**
Not applicable. This change affects repository configuration.
**Agent adapter(s) involved**
Not adapter-specific (repository configuration).
**Database mode**
Not database-related.
**Additional context**
The grouped major update included a blocked `js-yaml` upgrade. Separate
pull requests let other major updates proceed independently.
## What Changed
- Remove the `major-updates` group from the npm Dependabot entry.
- Raise the npm `open-pull-requests-limit` from 10 to 20.
- Keep the GitHub Actions Dependabot entry unchanged.
## Verification
- Run `python3 -c "import yaml;
yaml.safe_load(open('.github/dependabot.yml'))"`.
- Confirm the diff changes only `.github/dependabot.yml`.
- Confirm CI passes on this pull request.
## Risks
This change can open more Dependabot pull requests. The limit of 20
bounds the number of open npm update pull requests. No application code
changes.
## Model Used
OpenAI GPT-5. Tool use and code repository inspection assisted this
change.
## Checklist
- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` /
`Closes: #` / `Refs #` OR (b) described the issue in-PR following the
relevant issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge
Co-authored-by: Paperclip <noreply@paperclip.ing>
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Nicky LeachandPaperclip
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120ae5428f |
feat(server): add a one-click relink action for detached custom-image templates (#11641)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Paperclip environments can use captured custom images for agent runs > - A configuration fingerprint change can detach a valid custom-image template > - Operators need a safe way to confirm that the image still matches the boot source > - This pull request adds a guarded relink action with drift classification and audit logging > - The benefit is a deliberate relink without a new sandbox boot or provider snapshot ## Linked Issues or Issue Description **Subsystem affected** Cross-cutting environment, server, and UI behavior. **Problem or motivation** A custom-image template detaches when the environment configuration fingerprint changes. The runtime then uses the base image, even when the boot source did not change. The only prior remedy required a full re-capture. **Proposed solution** Add an operator-triggered relink action. Classify configuration drift from a server-owned boot-relevant snapshot. Relink knob-only drift without confirmation. Require explicit confirmation for boot-source or unclassified drift. Guard the route for instance administrators and record a safe activity event. **Alternatives considered** Keep requiring a full re-capture. This adds a sandbox boot and provider snapshot for cases where the image remains correct. **Roadmap alignment** The roadmap has no matching custom-image relink item. This change addresses an environment operation gap. **Additional context** The relink response exposes raw drift values only in the transient 409 response to the instance administrator. The service never persists or logs fingerprints or configuration values. Reserved identity-path segments fail closed. ## What Changed - Add `relinkActiveTemplate` with drift classification and conditional fingerprint update. - Persist a server-owned boot-relevant configuration snapshot during capture. - Add the guarded relink route with strict request validation and activity logging. - Add the relink action and confirmation flow to the environment page. - Add service, route, UI, and OpenAPI coverage. ## Verification - Run the focused service suite: `pnpm vitest run server/src/services/environment-custom-images-service.test.ts`. - Run the focused route suite: `pnpm vitest run server/src/routes/environment-custom-image-routes.test.ts`. - Run the focused UI suite: `pnpm vitest run ui/src/pages/CompanyEnvironments.test.tsx`. - Run server and UI TypeScript checks. - Confirm the OpenAPI snapshot matches the new route. - Confirm all required GitHub checks pass on commit `e46fdcfe94a719be854adf8849d30714e5b70b93`. - Confirm Greptile reports 5/5 with no unresolved review threads. ## Risks The relink action can keep an image after configuration drift. The service requires explicit confirmation for boot-source or unclassified drift. Reserved path segments produce a safe unresolved marker and never enter stored values. ## Model Used OpenAI GPT-5 Codex. The model used repository inspection, GitHub operations, and PR preparation with tool use and code execution. The runtime did not expose a context-window value or a separate reasoning-mode value. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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fe803bedf1 |
feat(server): add a configurable cooldown to the terminal workspace reaper (#11642)
## Thinking Path > - Paperclip is an open source app that manages AI agents for work. > - The server manages execution workspaces and their worktrees. > - The terminal workspace reaper removes a workspace when its issue tree reaches a terminal state. > - Immediate removal prevents a person from reopening recently completed work. > - This pull request adds a configurable cooldown before the reaper archives the workspace. > - The cooldown keeps recent work available and keeps immediate cleanup available with value `0`. ## Linked Issues or Issue Description Refs: #7790 **Problem** The reaper archives an execution workspace and deletes its worktree as soon as the issue tree becomes terminal. A person cannot reopen recent work without extra effort. **Expected behavior** The reaper should keep a recently completed workspace during a configurable cooldown window. It should archive older work and support immediate cleanup when the value is `0`. **Proposed solution** Read the cooldown from `PAPERCLIP_WORKSPACE_REAPER_COOLDOWN_DAYS`. Use a seven-day default. Use the latest terminal timestamp in the source issue tree as the cooldown anchor. ## What Changed - Add `PAPERCLIP_WORKSPACE_REAPER_COOLDOWN_DAYS` with a seven-day default. - Treat `0` as no cooldown and use the default for negative or non-numeric values. - Use the latest `completedAt` or `cancelledAt` value in the source issue tree. - Use `updatedAt` when a terminal timestamp is null. - Skip candidates inside the cooldown and report them in `skippedCooldown`. - Recheck the cutoff during the guarded archive operation. - Document the environment variable and add focused tests. ## Verification - Run `npx vitest run server/src/__tests__/execution-workspaces-service.test.ts`. - Confirm that the test run passes 66 tests. - Confirm that the tests cover a recent tree, an old tree, value `0`, and a null terminal timestamp. - Confirm that the changed files pass `tsc --noEmit`. ## Risks The default changes terminal workspace cleanup from immediate removal to a seven-day delay. A value of `0` preserves immediate cleanup. The guarded archive check limits race risk during concurrent lifecycle changes. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap. ## Model Used OpenAI Codex, GPT-5, tool use and code execution. This model assisted with the implementation review and PR preparation. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> Co-authored-by: greptile-apps[bot] <165735046+greptile-apps[bot]@users.noreply.github.com> |
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Nicky LeachandPaperclip
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0e9b03832d |
fix(server): skip host provisionCommand for sandbox-driver environments (#11626)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The run orchestrator prepares an execution environment before an agent starts > - A sandbox driver creates a remote folder before the adapter uploads repository content > - The orchestrator ran the host `provisionCommand` in that empty folder > - The command failed with exit 127 before the adapter could run its `stage.sync` step > - This pull request skips host provisioning for sandbox drivers and keeps the existing local and SSH behavior > - The benefit is that sandbox runs reach the adapter sync step without an empty-folder setup failure ## Linked Issues or Issue Description **What happened?** A sandbox environment ran the host `provisionCommand` before the adapter uploaded repository content. The command ran in an empty remote folder and failed with exit 127. **Expected behavior** The orchestrator should skip host provisioning for a sandbox driver. The adapter should upload the provisioned tree during its `stage.sync` step. **Steps to reproduce** 1. Configure an environment with the `sandbox` driver and a host `provisionCommand`. 2. Start a run that uses this environment. 3. Observe that the command runs in the empty sandbox folder and the run fails with `setup_failed`. **Paperclip version or commit** Reproduced on the current `master` commit before this change. **Deployment mode** Built from source with a sandbox environment. **Installation method** Built from source with pnpm. **Agent adapter(s) involved** Not adapter-specific (core bug). The sandbox adapter syncs the tree after environment setup. **Database mode** Not database-related. **Additional context** Related context: [#11091](https://github.com/paperclipai/paperclip/pull/11091) changes provision behavior for reused workspaces. This pull request covers the separate sandbox ordering failure. ## What Changed - Skip the orchestrator provision step when `environment.driver` is `sandbox`. - Keep the existing skip for `local` and the provision step for `ssh`. - Log one info message when a sandbox skip drops a present command. - Keep the existing `plugin` path because it has no `stage.sync` step and runs against the host filesystem. - Add tests for sandbox, local, SSH, plugin, logging, and provision failures. ## Verification - Run `./node_modules/.bin/vitest run server/src/__tests__/environment-run-orchestrator.test.ts`. - Confirm that the test run passes all 10 tests. - Confirm that CI checks pass on this pull request. ## Risks - Low risk. The change affects only the provision gate for sandbox drivers. - SSH and local behavior stays unchanged. - The plugin driver stays on its current path. - The new log line makes a sandbox skip visible to operators. ## Model Used OpenAI, GPT-5, exact runtime model `gpt-5`, with tool use and code review support. The implementation author used this model to inspect code, edit source and tests, and run the targeted test suite. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above (no exact duplicate found; related PR #11091 reviewed) - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes (no documentation change applies to this internal gate correction) - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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b446ff59bf |
refactor(acpx-engine): coordinator-owned ACP run lifecycle with a typed resource ledger (#11576)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Agent adapters run agent sessions through the ACPX engine > - The ACPX engine handled one run attempt as a long implicit procedure > - That shape made resource ownership, cleanup order, and failure behavior hard to verify > - This pull request gives the attempt a coordinator, a typed resource ledger, separate run sites, and explicit turn and settlement sequences > - The benefit is clear ownership, one cleanup path, safer session reuse, and testable failure behavior ## Linked Issues or Issue Description **What existing behavior does this improve?** The ACPX engine manages startup, turn execution, session reuse, and cleanup inside one large run procedure. **Current behavior** The run procedure owns several resources through implicit control flow. Cleanup and session reuse behavior depend on lane-specific branches and error paths. **Proposed behavior** The coordinator owns the run attempt. A typed ledger records six resources and their states. Host and sandbox run sites own lane-specific acquisition. Turn and settlement sequences expose typed outcomes. The engine emits allowlisted phase telemetry. **Reason and benefit** Explicit ownership makes cleanup and failure behavior easier to inspect. The fault matrix and characterization tests protect the external result while the refactor reduces hidden control flow. **Breaking changes** None to the public adapter contract. The host warm-save path now closes and relaunches the runtime because a transferred runtime could retain a run-scoped credential. A cold session-handshake failure now closes the created runtime. **Additional context** This pull request contains the ACPX engine lifecycle refactor, its tests, and the lifecycle document. ## What Changed - Add a run coordinator for startup, turn execution, settlement, and result reproduction. - Add a typed resource ledger with open, sealed, and consumed states. - Add host and sandbox run sites for lane-specific resource acquisition. - Replace separate runtime maps with a generic session reuse store. - Split session fingerprint identity from the outer session key. - Add typed turn and settlement sequences with one cleanup owner. - Add a closed allowlist for phase telemetry. - Add characterization tests and a 17-case fault matrix. - Add `doc/acp-run-lifecycle.md`. ## Verification - `npx vitest run packages/adapter-utils/src/acpx-engine/` passes 18 files and 286 tests at the submitted commit. - `pnpm --filter @paperclipai/adapter-utils typecheck` reports 0 errors at the submitted commit. - Run the full pull request checks after GitHub starts CI. - Run Greptile review after the pull request opens. ## Risks - The refactor changes internal control flow across the ACPX engine. - Host warm-save behavior now closes and relaunches the runtime. - Settlement changes the handling of a cold session-handshake failure from a leak to a close. - The characterization baselines and fault matrix reduce the risk of an external behavior change. > Paperclip is the open source app people use to manage AI agents for work > The adapter layer runs agent sessions through the ACPX engine > The engine needs explicit lifecycle ownership for reliable cleanup > This pull request adds coordinator-owned phases and a typed resource ledger > The result makes lifecycle behavior easier to test and review ## Model Used OpenAI GPT-5 Codex. Exact model ID: GPT-5. The model used tool execution, repository inspection, and code review support. The implementation author supplied the submitted code. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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c1c46f1e4e |
feat: Claude login on the new-agent page before agent creation (#11347)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The Claude local adapter supports subscription login through a sandbox > - The new-agent page must show login before the user creates an agent > - Test results must not expose raw sandbox diagnostics or secret values > - This pull request adds the login UI to both Test lanes and closes the diagnostic boundary > - The branch also adds durable cleanup recovery for failed sandbox teardown > - Reusable sandboxes must retain both their recorded teardown configuration and a valid lifecycle path until destruction succeeds > - The benefit is a usable login flow with fixed public checks, redacted server logs, and recoverable sandbox cleanup ## Linked Issues or Issue Description Related public work: [#9488](https://github.com/paperclipai/paperclip/pull/9488) adds first-class recognition for `CLAUDE_CODE_OAUTH_TOKEN` in headless and remote runs. Related public issue: [#2681](https://github.com/paperclipai/paperclip/issues/2681) requests Claude Code subscription support. This pull request adds the login transport and new-agent UI flow that those changes do not provide. **Subsystem affected:** Claude local adapter, server login probes, sandbox provider setup, cleanup recovery, and the new-agent UI. **Problem or motivation:** The Test lanes did not show the sandbox login panel in all supported cases. Test results also exposed raw probe diagnostics, and JSON escapes could end secret redaction early. **Proposed solution:** Surface the login capability through the bundled provider manifest. Prepare the same probe runtime in the ACP lane. Send diagnostics only to redacted server logs. Keep Test checks on fixed public messages. Normalize login URL hints to allowlisted HTTPS Claude and Anthropic hosts. Consume JSON escapes during redaction. Preserve failed sandbox cleanup state across retries and restarts, and prevent deletion from severing the lifecycle context of a live reusable sandbox. **Alternatives considered:** Keep raw diagnostics in Test checks or trust login URL text from the sandbox. Both choices increase information exposure. Keep separate probe behavior in the ACP lane. That choice would leave the two Test lanes inconsistent. ## What Changed - Surface the sandbox login panel on both Test lanes. - Reconcile the bundled Daytona plugin manifest so `supportsSetupTokenLogin` reaches the UI capability gate. - Prepare the ACP Test lane with the same probe runtime as the CLI Test lane. - Add the `claude_acp_login_probe_unavailable` warning when the ACP probe cannot run. - Send raw sandbox diagnostics only to redacted server logs. - Keep Test checks on fixed public messages in the ACP, managed-config, and CLI paths. - Normalize login URL hints to allowlisted HTTPS Claude and Anthropic hosts. - Redact JSON and escaped-JSON secret values, including escaped quotes and backslashes. - Preserve orphan cleanup records across provider failures, restarts, and unavailable plugins. - Atomically block environment deletion while a live reusable sandbox lease still depends on it. - Verify pending cleanup destroys plugin sandboxes with the provider configuration recorded on the lease, even after the current environment configuration changes. ## Verification - Head under review: `506b7fa2d83c36bfa5fd722ee9d95b0c7431c241`. - Focused environment route/service/runtime coverage passes: 196 tests across 3 files. - `pnpm -r typecheck` passes. - `pnpm build` passes. - The full Vitest run completed with 4,754 passing and 28 failing tests. All 23 source-test failures reproduce unchanged on parent head `58cfe61a33191ce03d965d65085d26064b4888ba`; the other 5 are duplicate executions from stale `server/dist` output. The failures are unrelated macOS path/listener and scheduler-fixture failures, so there is no new bad commit for bisect to localize. - All required CI checks pass for the current head, including build, typecheck/release registry, all server and workspace shards, serialized server suites, canary, and e2e. - A fresh Greptile review for `506b7fa2d83c36bfa5fd722ee9d95b0c7431c241` reports 5/5, “safe to merge,” with no blocking failure remaining. ## Risks - A probe or redaction change could hide useful server diagnostics. - An allowlist change could reject a valid Claude login URL. - Cleanup recovery changes could affect provider teardown ordering. - An environment with a live reusable sandbox can no longer be deleted until the owning issue or execution workspace completes teardown. - The implementation keeps public Test messages fixed and sends detail to redacted server logs. ## Model Used OpenAI GPT-5 via Codex — exact model ID: GPT-5; tool use and code execution enabled; extended reasoning enabled. The implementation author used AI-assisted development. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and documented the result - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation or confirmed no separate documentation change is needed - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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3061ce6901 |
feat(sandbox): stream session output by capability, drop three operator flags (#11557)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Sandboxed agents use provider capabilities to select safe execution paths > - Session output still depends on three operator flags that duplicate capability data > - Duplicate flags can drift from the verified sandbox capability snapshot > - This pull request makes the capability snapshot the only streaming decision and removes the obsolete flags > - The benefit is default streaming with a poll fallback when a capability or stream fails ## Linked Issues or Issue Description **What existing behavior does this improve?** ACP sandbox session-output streaming and sandbox execution configuration. **Subsystem affected** Cross-cutting (multiple of the above): server/, packages/shared/, packages/adapter-utils/, and packages/plugins/. **Current behavior** Session-output streaming requires operator flags in the server and Daytona plugin configuration. Saved configurations can retain a removed key. **Proposed behavior** The verified capability snapshot selects streaming. The Daytona plugin uses persistent sessions by default, keeps bypass commands one-shot, and falls back from the log stream to polling. Removed configuration keys become inert. **Reason and benefit** One capability source prevents configuration drift. The fallback keeps output available when capability resolution or log streaming fails. **Breaking changes** The three operator flags no longer control session-output streaming. Existing saved keys load but have no effect. ## What Changed - Remove `useSessions` and `useLogStream` from the Daytona plugin configuration and manifest. - Remove `streamAgentSessionOutput` from server configuration, shared types, and execution-target plumbing. - Select streaming from `persistentProcessSessions` and `independentControlCommands`. - Keep poll fallback on capability resolution failure and stream failure. - Strip removed keys from strict fake-sandbox and catchall plugin configuration. - Update the sandbox capability documentation and focused tests. ## Verification - `tsc --noEmit` passed in `packages/shared`, `packages/adapter-utils`, `server`, and the Daytona plugin. - Daytona `plugin.test.ts` passed 139 tests. - Server capability, configuration, route, and runtime suites passed 160 tests. - `packages/adapter-utils` `execution-target-sandbox.test.ts` passed 44 tests. - The capability matrix covers stream, poll, and resolution-failure paths. - Removed-key tests cover strict fake-sandbox and catchall plugin schemas. ## Risks - A capability snapshot that lacks either required session capability uses polling. - A log stream failure uses polling and can increase request count. - Existing removed configuration keys no longer change behavior. - The isolated-worktree Daytona Vitest run has a pre-existing missing `packages/adapters/droid-local` reference. CI and standard checkouts use the committed configuration. ## Model Used OpenAI Codex, GPT-5, tool use and code review assistance. The exact runtime context window is managed by the Codex platform. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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e71ce9a9d3 |
feat: sandbox provider capability contract with fail-closed effective resolution (#11463)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Paperclip runs work through adapters and sandbox providers > - Providers need a clear contract so the server can use only verified capabilities > - A declared capability must not grant a method that the live worker did not verify > - This pull request adds manifest declarations and fail-closed effective capability resolution > - The benefit is safe provider reuse across execution targets and run lifecycles ## Linked Issues or Issue Description **Subsystem affected** Cross-cutting (multiple of the above) **Problem or motivation** Sandbox providers expose different runtime methods. The server needs one safe capability contract that accounts for provider declarations, worker verification, and narrowing configuration. **Proposed solution** Add strict manifest validation for five sandbox capabilities. Resolve effective capabilities as the subset of verified, declared, and narrowed values. Store the result as a frozen execution-target snapshot. **Alternatives considered** Trusting the manifest alone could grant methods that the worker does not support. Trusting only a fixed built-in list would reject valid third-party providers. The intersection rule keeps the verified runtime ceiling and supports both provider types. **Roadmap alignment** This change supports the ACP run lifecycle track and the sandbox provider contract work in the current roadmap. **Additional context** The legacy `supportsReusableLeases` field remains supported. The nested capability validator rejects unknown keys. Missing or unavailable verification resolves all capabilities to `false`. ## What Changed - Add strict `sandboxCapabilities` manifest validation with legacy reusable-lease compatibility. - Carry declarations through the ready-driver projection. - Add fail-closed effective resolution from verified, declared, and narrowed capabilities. - Add narrowing for provider configuration, Kubernetes Job leases, and Daytona sessions. - Add a frozen read-only capability snapshot to execution targets. - Add focused tests and keep existing characterization baselines covered. - Add and update sandbox provider capability documentation. ## Verification - `npx vitest run packages/shared/src/validators/plugin.test.ts` - `npx vitest run server/src/__tests__/plugin-environment-driver-sandbox-capabilities.test.ts` - `npx vitest run server/src/__tests__/sandbox-capability-contract.test.ts` - `npx vitest run server/src/__tests__/environment-execution-target-capabilities.test.ts` - `npx vitest run packages/adapter-utils/src/acpx-engine/startup-characterization.test.ts packages/adapter-utils/src/acpx-engine/turn-characterization.test.ts packages/adapter-utils/src/acpx-engine/settlement-characterization.test.ts packages/adapter-utils/src/acpx-engine/composed-run-characterization.test.ts` - Package typechecks for shared, server, and adapter-utils pass. - Stage-2 security review suites pass with 28 tests. ## Risks The resolver fails closed when verification is absent or unavailable. Providers that rely on undeclared capabilities may see narrower behavior until they expose verified worker methods. The change does not alter the existing native-sync guard. ## Model Used OpenAI Codex, GPT-5, exact runtime model ID `gpt-5`, tool use and code execution. The implementation author used this model to assist with the change. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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cd501499a2 |
test: add ACPX run lifecycle characterization baselines (#11461)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The adapter runtime starts, turns, settles, and composes ACPX runs > - Recent lifecycle corrections changed several order and cleanup rules > - Those rules need regression coverage before the planned engine refactor > - This pull request adds characterization suites for the corrected behavior > - The benefit is a clear test baseline for the next refactor ## Linked Issues or Issue Description **What existing behavior does this improve?** The ACPX adapter runtime and server heartbeat lifecycle need stable regression coverage for their current corrected behavior. **Subsystem affected** Cross-cutting (multiple of the above): `packages/adapter-utils` and `server` test suites. **Current behavior** The runtime has corrected rules for startup, turns, settlement, composed results, and heartbeat terminalization. The repository lacks a single characterization baseline for these rules. **Proposed behavior** Keep the current lifecycle rules pinned by five test suites. Let the later engine refactor change behavior only when it updates these tests with a clear reason. **Reason and benefit** The suites expose order, cleanup, transport, timeout, retry, result, and lease-release changes during the refactor. They also record one known latent defect as current behavior. **Breaking changes** None. This pull request adds tests only. ## What Changed - Add startup characterization coverage for commands, launch values, session fingerprints, sync order, bridge overlap, and cleanup paths. - Add turn characterization coverage for inputs, events, transports, timeout and cancel behavior, retry rules, errors, and usage. - Add settlement characterization coverage for teardown, adapter sync-back, workspace restore order, native sync, and error policy. - Add composed-run characterization coverage for result forms, finalization sets, and host-lane warm save and warm hit behavior. - Add server coverage that checks run terminalization before environment lease release. ## Verification - Run `npx vitest run packages/adapter-utils/src/acpx-engine/startup-characterization.test.ts packages/adapter-utils/src/acpx-engine/turn-characterization.test.ts packages/adapter-utils/src/acpx-engine/settlement-characterization.test.ts packages/adapter-utils/src/acpx-engine/composed-run-characterization.test.ts packages/adapter-utils/src/acpx-engine/execute.test.ts`. - Run `npx vitest run server/src/__tests__/heartbeat-run-terminalize-before-release.test.ts`. - The adapter-utils run passes 178 tests, and the server run passes 4 tests. - Check `pnpm --filter @paperclipai/adapter-utils typecheck`. - Check `pnpm --filter @paperclipai/server typecheck`. ## Risks Low risk. The change adds test files and does not change production code. One known cold ensure-session cleanup defect remains pinned as current behavior. ## Model Used OpenAI Codex, GPT-5, with tool use and code execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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e52b8a343f |
fix: ACP run lifecycle corrections — failure settlement, workspace sync-back, lease cleanup (#11454)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Agent adapters run ACP sessions and manage runtime, workspace, and lease resources. > - Several failure paths left runtime bridges, staged workspaces, or environment leases active after an error. > - These leaks reduce run reliability and can leave later runs without clean resources. > - This pull request closes the failure paths, applies one teardown policy, and adds regression tests. > - The benefit is consistent failure settlement and safer reuse of agent workspaces and leases. ## Linked Issues or Issue Description **What happened?** ACP runs could leave runtime bridges, staged workspaces, or environment leases active after failures. Claude and Gemini ACP runs did not restore the sandbox workspace on teardown. Lease release stopped when one lease returned an error. **Expected behavior** Each ACP failure must return an error result and settle its resources. Teardown must run each step, release leases independently, and restore the host workspace when the sandbox ends. Pending cleanup leases must receive bounded retry attempts. **Steps to reproduce** 1. Run an ACP session that fails after runtime creation or during turn preparation. 2. Run an ACP session that fails during a warm hit or staged runtime handoff. 3. Run lease cleanup with more than one lease when the first release returns an error. 4. Inspect the result phase, teardown calls, workspace state, and lease metadata. 5. Run the regression suites listed in the Verification section. ## What Changed - Settle every ACP failure after runtime creation with an error result and one sandbox.startup span closure. - Close the ACP runtime and remove warm entries after every pre-turn failure. - Run all teardown steps, record teardown errors, release staging leases in finally, and prevent duplicate teardown. - Dispose staged runtimes after seam failures and remove borrowed staged entries with identity guards. - Add fail-open workspace sync-back teardown for Claude and Gemini ACP adapters. - Isolate lease release errors and add bounded retry sweeps for stranded pending_cleanup leases. - Atomically claim pending_cleanup retries and clamp attempt readers to keep the five-attempt bound. - Default absent provider reusableLeases values to false and align the fake provider with its runtime declaration. - Add regression tests for engine, adapter, server, and shared environment behavior. ## Verification - [x] `npx vitest run packages/adapter-utils/src/acpx-engine/execute.test.ts` — 124 tests passed. - [x] `npx vitest run packages/adapters/codex-local/src/server/acp.test.ts packages/adapters/claude-local/src/server/acp.test.ts packages/adapters/gemini-local/src/server/acp.test.ts` — 61 tests passed. - [x] `npx vitest run server/src/__tests__/environment-runtime.test.ts server/src/__tests__/heartbeat-pending-cleanup-sweep.test.ts server/src/__tests__/reusable-leases-default.test.ts server/src/__tests__/environment-routes.test.ts packages/shared/src/environment-support.test.ts` — passed. - [x] All listed suites ran from the repository root. - [x] GitHub CI completed successfully for `cfc349c9f232711433897915112a1c52c0e462ca`. - [x] Greptile completed with a 5/5 confidence score and no blocking finding. ## Risks The engine changes affect failure settlement and teardown order across ACP runs. The server changes add retry state to existing lease metadata without a schema migration. The adapter changes restore workspaces after sandbox execution. Regression tests cover the changed paths. GitHub CI and Greptile passed for the current head. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. This change fixes runtime reliability and does not duplicate a roadmap feature. ## Model Used OpenAI GPT-5 Codex. The model used tool-based repository inspection, GitHub operations, and code review support. The runtime does not expose a context-window value. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (for example, `docs/...` or `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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bc9f70f54c |
fix(plugin-daytona): bound the sandbox liveness calls with a per-call timeout (#11408)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Sandbox provider plugins run agent work in remote execution environments > - The Daytona sandbox liveness read can stay pending when the connection stops responding > - A pending read blocks the plugin until a broad host-to-worker limit expires > - This pull request adds bounded deadlines to Daytona liveness calls and clears stale handles > - The benefit is a fast and clear error when a Daytona connection stops responding ## Linked Issues or Issue Description Refs #11341 **What happened?** The Daytona sandbox liveness read had no per-call timeout. A silent connection failure left the read pending until the broad host-to-worker RPC limit expired. **Expected behavior** The plugin should stop a liveness call within a defined limit and report a clear timeout error. **Steps to reproduce** 1. Create a Daytona sandbox handle. 2. Make the cached handle freshness read never resolve. 3. Run the next sandbox operation. 4. Observe that the operation waits for the outer RPC limit without a liveness timeout. **Paperclip version or commit** `master` before this change. **Deployment mode** Any deployment mode that uses the Daytona sandbox provider. ## What Changed - Add `withLivenessTimeout` with timer cleanup and `SandboxLivenessTimeoutError`. - Bound `refreshData` with configurable `livenessTimeoutMs`, which defaults to 30000 milliseconds. - Bound sandbox start and recovery calls with the SDK timeout plus a 5000 millisecond margin. - Reject `livenessTimeoutMs` values above 86400000 milliseconds and document the setting. - Evict a cached handle after a failed freshness refresh so the next operation fetches a new handle. - Add a test for a never-resolving freshness refresh and the cached-handle eviction. ## Verification - Run the Daytona plugin test suite with its package Vitest configuration. - Confirm that 150 of 150 tests pass. - Confirm that the new test reports a bounded timeout and a fresh handle on the next operation. - Confirm that GitHub Actions reports green status checks after the pull request starts. ## Risks This change adds an early timeout only to Daytona liveness calls. A value of 0 or less disables the extra bound. The default leaves normal SDK calls within their expected time limit. The main risk is a timeout value that is too short for a slow but healthy connection. ## Model Used OpenAI Codex, GPT-5. The model used tool calls and code execution. The model supplied the PR handoff and did not author the code in this pull request. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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fdb9a4880d |
fix(security): route paperclipai CLI guidance through safe npx form (CWE-78) (#11400)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Paperclip provides CLI commands and guidance for operators and agents > - The `pnpm paperclipai` script can pass argument values through a shell > - Shell re-parsing can execute command substitutions inside quoted values > - This pull request routes guidance through inert-argv `npx paperclipai` commands and adds regression coverage > - The benefit is safer operator guidance across documentation and runtime hints ## Linked Issues or Issue Description This pull request fixes a command-injection-class defect in Paperclip CLI guidance. **What happened?** The `pnpm paperclipai <sub> --flag "$VALUE"` form can re-parse argument values through a shell. A command substitution inside a quoted value can execute on the host. **Expected behavior** Paperclip guidance must pass CLI values as inert argument values. Host-derived values must not appear in copyable commands. **Steps to reproduce** 1. Run a Paperclip guidance command that uses the `pnpm paperclipai` script. 2. Provide a quoted value that contains a command substitution. 3. Observe that the shell can evaluate the substitution before the CLI starts. 4. Compare the result with the `npx paperclipai` form. **Paperclip version or commit** `5670984b75d109950c968542a0111ebb6967f4da` **Deployment mode** All deployment modes that show or use the affected CLI guidance. **Installation method** Built from source and installed CLI guidance. **Agent adapter(s) involved** Not adapter-specific (core bug). **Database mode** Not database-related. **Access context** Both. **Additional context** The earlier merged PR [#11343](https://github.com/paperclipai/paperclip/pull/11343) used the unsafe `pnpm exec paperclipai` form. This fresh PR replaces that guidance with the safe `npx paperclipai` form. ## What Changed - Standardize documentation and runtime hints on `npx paperclipai`. - Remove the broken `pnpm exec paperclipai` guidance. - Use a static `<host>` placeholder in private-hostname guidance. - Add regression tests for unsafe forms, continued lines, static hosts, and offline guidance. ## Verification - `git diff --check origin/master...origin/fix/paperclipai-cli-npx-safe-invocation` passes. - The branch adds `server/src/__tests__/cli-invocation-safety.test.ts` and updates private-hostname tests. - CI must run the new tests, typecheck, lint, and build checks. - Local Vitest execution was not available because this worktree has no installed Vitest binary. ## Risks - The change affects operator and agent documentation text. - The runtime hints now show `<host>` instead of a request-derived host value. - No database schema or migration changes exist. - CI will detect any missed unsafe invocation or type error. ## Model Used OpenAI GPT-5, exact model ID `gpt-5`, with tool use and code-review assistance. The model used repository inspection, Git operations, and PR preparation. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] CI ran the test suites and they pass; local test execution was unavailable in this worktree - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I addressed all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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ed8075b535 |
fix(adapter-utils): order stdin file writes in the sandbox process-session bridge (#11406)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Agent adapters can run through a sandbox process-session bridge > - The bridge writes streamed standard input to files before the remote process reads them > - Concurrent file writes can make a later chunk visible before an earlier chunk > - The remote process can then parse a tail fragment and wait forever for the missing head > - This pull request serializes host writes and makes an unexpected file gap a loud error > - The benefit is ordered input with a bounded failure path for sandbox ACP sessions ## Linked Issues or Issue Description No public GitHub issue exists for this change. The description below follows `.github/ISSUE_TEMPLATE/bug_report.yml`. **What happened?** A sandbox ACP process-session bridge could stall after its handshake when a run sent a large prompt. The host sent one un-awaited file write for each standard input chunk. A small later chunk could finish before a large earlier chunk. The remote poller then sent the tail bytes first. The agent parser raised an error on the tail fragment, and the head bytes stayed buffered without a newline. **Expected behavior** The bridge must expose standard input files in sequence. The remote poller must report a clear error when an earlier file remains missing beyond the retry budget. **Steps to reproduce** 1. Start an ACP session through a sandbox process-session bridge. 2. Send a prompt that produces multiple standard input file chunks. 3. Delay finalization of an earlier chunk while a later chunk completes. 4. Observe that the remote parser can receive the later chunk first and the session can stop without a clear error. **Paperclip version or commit** The change targets the current `master` branch at the submitted commit. **Deployment mode** The bug affects sandbox execution. **Agent adapter(s) involved** The failure affects the ACP process-session bridge. **Database mode** Not database-related. **Additional context** The fix keeps the existing per-file atomic write behavior. It adds ordering at the host write boundary and a bounded ordering check in the shared wrapper poll tail. ## What Changed - Add a per-session promise chain for host standard input file writes. - Keep a failed write from blocking later chain entries. - Track the next expected sequence number in the shared wrapper poll tail. - Hold later files while an earlier file is missing within the existing retry budget. - Emit a loud error and advance after the retry budget expires. - Add regression tests for host ordering, gap holding, and the loud error path. ## Verification - `npx vitest run packages/adapter-utils/src/execution-target-stdin-race.test.ts` — 9 tests passed. - `npx vitest run packages/adapter-utils/src/execution-target-sandbox.test.ts` — 43 tests passed. - `pnpm --filter @paperclipai/adapter-utils typecheck` — clean. - With the source fix reverted, the 3 new tests fail and the 6 original tests pass. - CI must pass on the pull request before merge. ## Risks Low risk. - The host now serializes writes for each session, which can reduce write parallelism. - A failed write still emits one error and destroys the socket, as before. - The wrapper can emit a loud error after the existing retry budget when a file gap persists. - The change does not alter the atomic per-file write behavior. ## Model Used OpenAI GPT-5, model ID `gpt-5`, with tool use and code execution. The context window and internal reasoning details are not disclosed. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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6f26f2a450 |
fix(adapter-utils): add per-iteration timeout and watchdog to the sandbox callback bridge poll loop (#11341)
## Thinking Path > - Paperclip runs AI agents through adapters and sandboxed execution paths > - The sandbox callback bridge carries file requests between the host and a sandbox > - The poll loop waited forever when a sandbox call stopped responding > - A permanent wait stranded queued requests and hid the run failure > - This pull request adds bounded timeouts, abort handling, recovery backstops, and trace reporting > - The benefit is prompt request failure, safe mutation outcomes, run-level error reporting, and trace visibility ## Linked Issues or Issue Description **What happened?** The sandbox callback bridge could wait forever when a client call stopped responding without a rejection. **Expected behavior** The bridge should fail queued requests and report a run-level error when the sandbox channel stops responding. **Steps to reproduce** 1. Start a sandbox callback bridge. 2. Queue a request. 3. Make the sandbox call stop responding. 4. Observe that the request does not receive a failure response. **Paperclip version or commit** Commit `edc4f71b460c600f97cf44cb486d5cac72ca2db9`. **Deployment mode** Built from source. **Installation method** Built from source with pnpm. **Agent adapter(s) involved** Custom or external sandbox callback bridge. **Database mode** Not database-related. ## What Changed - Add a per-iteration timeout for `listJsonFiles` and `processRequestFile`. - Add a watchdog that fails pending requests when the loop makes no progress. - Abort a hung handler and use a non-retryable 504 backstop when its outcome can be indeterminate. - Retry recovery writes and keep queued requests when a recovery write fails. - Forward the indeterminate-outcome header through the execution target. - Record worker failures through the `sandbox.callbackBridge.workerFailed` trace span. - Add tests for timeout, watchdog, recovery, mutation safety, header forwarding, and fast-request behavior. ## Verification - Run `pnpm exec vitest run packages/adapter-utils/src/sandbox-callback-bridge.test.ts packages/adapter-utils/src/execution-target-sandbox.test.ts`. - Confirm that the PR test, typecheck, build, end-to-end, serialized test, and security checks pass. - Confirm that the current PR head is `edc4f71b460c600f97cf44cb486d5cac72ca2db9`. - Confirm that the PR changes four files: the callback bridge, its tests, the execution target, and its tests. ## Risks The default timeout can fail a slow but valid sandbox call. The defaults remain configurable, and the iteration timeout stays below the sandbox response deadline. A mutation that may have committed returns a non-retryable 504 outcome so the caller does not apply it twice. ## Model Used OpenAI Codex, GPT-5 current runtime, with extended reasoning and tool use. The exact context window is not exposed by the runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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69027cbaae |
fix(workspaces): reopen archived git worktree for managed_checkout projects (#11395)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Execution workspaces give agent tasks isolated Git worktrees > - Archived isolated workspaces must reopen against a live project checkout > - A managed_checkout project has no project workspace directory in its row > - The reopen path used the removed archived worktree as the Git working directory > - This pull request resolves the live managed checkout and reports a clear error when it is unavailable > - The benefit is reliable workspace reopen behavior after archive cleanup ## Linked Issues or Issue Description Related public pull request: [#6164](https://github.com/paperclipai/paperclip/pull/6164) clears archive state during un-archive. This pull request fixes the separate reopen failure that occurs after archive cleanup. **What happened?** An archived isolated `git_worktree` workspace under a `managed_checkout` project failed to reopen after cleanup. The route attempted to run Git in the removed archived worktree and returned a generic service error. **Expected behavior** The reopen path should use the live managed checkout as the Git base directory and should return a clear error when that directory is unavailable. **Steps to reproduce** 1. Create a project with `managed_checkout` source control. 2. Create and archive an isolated `git_worktree` execution workspace. 3. Let archive cleanup remove the worktree. 4. Reopen the workspace for an issue. **Paperclip version or commit** `cab0c31dc61310106caef42ca244e9f7b0f19460` **Deployment mode** Local dev with the default embedded database. **Agent adapter(s) involved** Not adapter-specific. This issue affects core workspace handling. ## What Changed - Resolve the live managed checkout when a managed project reopens an archived Git worktree. - Keep local-folder projects on their project workspace directory. - Validate the Git base directory before `git rev-parse` and return a scrubbed error. - Add nine regression tests for workspace reopen behavior. ## Verification - `server` TypeScript check passes with `tsc --noEmit`. - `server/src/__tests__/execution-workspace-reopen.test.ts` passes with 9 tests. - GitHub Actions must pass all required PR checks. ## Risks Low risk. The change affects only archived isolated workspace reopen behavior. It reuses the existing managed checkout and Git authentication helpers. It adds no new credential path, endpoint, or telemetry. ## Model Used OpenAI GPT-5 assisted with review and GitHub operations. The implementation author supplied the code and test results. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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5ca7b4c1fe |
fix(security): standardize paperclipai CLI guidance on safe npx path (#11343)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Paperclip provides CLI guidance to agents and operators through documentation and runtime messages. > - Content-bearing `pnpm paperclipai` examples send arguments through a shell. > - Shell evaluation can execute command substitutions in untrusted argument content. > - Runtime hostname guidance can also place request-derived content inside a shell command. > - This pull request uses `npx paperclipai` for content-bearing guidance and uses a static hostname placeholder. > - The benefit is safer copy-paste guidance for agents and operators. ## Linked Issues or Issue Description **Issue type** Incorrect information **Where is the issue?** CLI guidance in `doc/CLI.md`, `skills/paperclip/SKILL.md`, documentation, and runtime-generated hints. **What's wrong?** Content-bearing `pnpm paperclipai` commands can pass argument text through `/bin/sh`. Shell command substitution in an argument can execute before the CLI receives the value. **Suggested fix** Use `npx paperclipai` for content-bearing commands. Use a static `<host>` placeholder when runtime guidance displays the allowed-hostname command. ## What Changed - Replace content-bearing `pnpm paperclipai` examples with `npx paperclipai` across the documentation and agent-facing guidance. - Update runtime-generated CLI hints to use a static `<host>` placeholder. - Add safety notes to `doc/CLI.md` and `skills/paperclip/SKILL.md`. - Add scans and regression tests for unsafe invocation and hostile hostname headers. - Keep fixed lifecycle commands and `pnpm --filter @paperclipai/*` build commands unchanged. ## Verification - Run `tsc --noEmit` for the changed server files. - Run `cli-invocation-safety.test.ts`. - Run `private-hostname-guard.test.ts`. - Confirm that hostile hostname headers do not enter shown shell commands. - Confirm that the three commits contain the required Paperclip co-author trailer. ## Risks - This change updates documentation and diagnostic text across many surfaces. - Fixed lifecycle and setup commands remain unchanged. - The tests fail if content-bearing `pnpm paperclipai` guidance returns. - The change does not alter the CLI argument parser. ## Model Used OpenAI Codex, GPT-5, tool use, code execution, and repository review assistance. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
05d58cd884 |
fix(tool-gateway): keep unsigned ask-first requests out of the review queue without cancelling them (#11338)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The tool gateway creates approval requests and the review queue reads them > - The gateway creates a request row before it adds the signature > - A review-queue read can see the row during that short unsigned state > - The old read path cancels the unsigned row, so approval returns `409 action_not_pending` > - This pull request hides unsigned in-flight rows and keeps them pending until signing finishes > - The benefit is that approval succeeds while invalid signed requests remain cancelled ## Linked Issues or Issue Description **What happened?** A review-queue read cancelled a pending tool action request when the request had no signature yet. The next approval call returned `409 action_not_pending`. **Expected behavior** The review queue must hide an unsigned in-flight request and keep its state as `pending`. A request with an invalid signature must remain cancelled. **Steps to reproduce** 1. Create a require-approval tool action request. 2. Read the review queue while the request signature is still null. 3. Approve the request after the creator adds the signature. 4. Observe that the old code cancels the request and the approval call fails. **Paperclip version or commit** Commit `720aa0a494bbaa1711bc7a3d795f810765915bfe`. **Deployment mode** Local dev with the embedded PGlite database. **Installation method** Built from source with pnpm. **Agent adapter(s) involved** Not adapter-specific. This is a core tool access service bug. **Database mode** Embedded PGlite. **Access context** Board and agent tool approval flow. ## What Changed - Keep a pending request with a null signature out of `listActionRequests` results. - Cancel a request when its non-null signature fails verification. - Add a permanent regression test for the unsigned request transition. - Update the contract test for unsigned and invalid-signature requests. ## Verification - Run the tool access service, tool gateway service, tool gateway, and tool access policy service tests. - Confirm 227 tests pass. - Run the `@mcp-runnable` Playwright end-to-end suite in CI. - Run the US-9 loop 30 times in CI. ## Risks The change alters review-queue filtering for unsigned requests. A null signature now means that signing remains in progress. Invalid signed requests keep the existing cancellation behavior. The change has no database migration. ## Model Used OpenAI Codex, GPT-5, with tool use and code execution. The model reviewed the handoff, repository rules, and pull request state. The implementation author supplied the code and tests. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
031003c5e1 |
fix(ui): search parent-issue picker on the server (#11334)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The board UI lets an operator choose a parent issue for an issue > - The parent picker loads a priority-first page and filters that page in the browser > - A medium-priority or low-priority issue past the page limit never enters the picker > - This pull request sends typed parent-picker text to the server and keeps the picker exclusions > - The benefit is that the operator can select valid parent issues beyond the default page ## Linked Issues or Issue Description This pull request supersedes [#6193](https://github.com/paperclipai/paperclip/pull/6193), whose old file path no longer matches the current component tree. **What happened?** The parent picker fetched one default issue page and filtered it in the browser. The default page sorts by priority and caps the result at 500 issues. Valid medium-priority and low-priority parent issues beyond that page stayed hidden. **Expected behavior** The parent picker must search the server when the operator types text. It must show matching issues beyond the default page while it keeps the current issue and descendant exclusions. **Steps to reproduce** 1. Open an issue in a company with more than 500 issues. 2. Open the parent picker and type the name of a medium-priority or low-priority issue beyond the default page. 3. Observe that the picker does not show the matching issue. **Paperclip version or commit** Commit `c6965bd0237fd9536b41f1495e2a4bb252afcde7`. **Deployment mode** Local dev (`pnpm dev`). ## What Changed - Send parent-picker searches to the issue list endpoint with `q` and a bounded `limit` of 50. - Keep the empty-search list, cycle exclusions, and current sort behavior. - Add a component test for a low-priority match hidden by the default page. ## Verification - Run `pnpm vitest run ui/src/components/IssueProperties.test.tsx`. - Confirm that all 53 tests pass. - Confirm that the new test checks `{ q, limit: 50 }` and the matching issue. ## Risks - Low risk. The change affects only parent-picker search requests. - The server search uses the existing issue list query and does not change stored data. ## Model Used Codex, GPT-5, with tool use and code execution. The model assisted with the change and test. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
44694328a3 |
fix(issues): make DELETE /api/issues/:id succeed for issues with dependents (#11331)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The server provides issue APIs and the database stores issue child rows > - The issue delete endpoint removes the parent issue before dependent rows > - Several issue foreign keys had no delete policy, so PostgreSQL returned a foreign-key error > - This pull request adds safe cascade and set-null policies and a clear conflict response > - The benefit is reliable issue deletion with a useful error when a restricted audit row still blocks deletion ## Linked Issues or Issue Description Fixes #7728 Fixes #4660 Fixes #7991 Fixes #4627 Fixes #5086 **What happened?** `DELETE /api/issues/:id` returned HTTP 500 when dependent comments, thread interactions, read states, inbox archives, feedback votes, or ledger rows referenced the issue. The database raised SQLSTATE 23503 because several foreign keys had no delete policy. **Expected behavior** The endpoint must remove dependent rows that have no meaning without the issue. It must keep ledger rows with a null issue reference. It must return HTTP 409 when a restricted decision audit row still references the issue. **Steps to reproduce** 1. Create an issue. 2. Add a comment or thread interaction that references the issue. 3. Send `DELETE /api/issues/:id`. 4. Observe the HTTP 500 response. **Paperclip version or commit** Commit `1f8f456f8340823fe2bd891ae8933d942f190b7b`. **Deployment mode** Local dev with embedded PGlite or external PostgreSQL. ## What Changed - Add `CASCADE` to five issue child foreign keys. - Add `SET NULL` to the finance and cost event issue foreign keys. - Keep decision audit references restricted. - Map SQLSTATE 23503 from the issue delete service to HTTP 409. - Add migration 0217 for the seven changed tables. - Add regression tests for cascade deletion and restricted decision references. ## Verification - Run `pnpm --filter @paperclipai/db typecheck`. - Run `pnpm --filter @paperclipai/server typecheck`. - Run `npx vitest run src/__tests__/issue-remove-cascade.test.ts` from `server/`. - The regression test applies migration 0217 to a fresh embedded PostgreSQL database. ## Risks - Migration 0217 changes only seven foreign keys that reference `issues.id`. - Cascade deletion removes child rows that cannot exist without the parent issue. - Set-null preserves finance and cost ledger rows. - Decision audit rows remain protected, so the endpoint can return HTTP 409. ## Model Used Codex, based on GPT-5, with tool use and code-review support. The implementation author used an AI coding agent. This PR handoff uses the same model family to validate the commit and manage the pull request. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [ ] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
68ea3fcf53 |
test(ui): stabilize annotation popover submit-shortcut test (#11330)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The board UI lets users add comments to document annotations > - The annotation popover test submits a comment with a keyboard shortcut > - React can delay the controlled textarea update under load > - The test can then send the shortcut before the handler sees the typed value > - This pull request waits for the value update before it sends the shortcut > - The benefit is a stable test that checks the real submit path ## Linked Issues or Issue Description **What happened?** The annotation popover test typed a comment and sent the submit shortcut in one synchronous step. Under load, React sometimes had not committed the typed value when the handler ran. The mutation then ran zero times. **Expected behavior** The test should wait for the controlled textarea value before it sends the submit shortcut. The handler should read the comment and call the create mutation. **Steps to reproduce** 1. Run `npx vitest run src/components/DocumentAnnotationPopover.test.tsx` from `ui/`. 2. Repeat the test under system load. 3. Observe intermittent failures where the create mutation runs zero times. **Paperclip version or commit** The test runs against commit `9a08def5752bb13e4cbcb304c6295e175c92db3c`. **Deployment mode** This change affects the UI test suite only. It does not depend on a deployment mode. ## What Changed - Wait for the Comment button to enable after the controlled value updates. - Send the submit shortcut after React commits the typed value. - Keep the test focused on the compose-mode submit path. ## Verification - The author ran `npx vitest run src/components/DocumentAnnotationPopover.test.tsx` from `ui/` with 3 tests passing. - The current handoff worktree could not repeat the test because its installed dependencies lack `react/jsx-runtime`. - GitHub Actions will run the required project checks. ## Risks Low risk. The change updates one UI test file and does not change product code. ## Model Used OpenAI Codex, GPT-5. The model used tool calls and code execution. The context window size was not provided. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
d0d242e843 |
feat(server): reopen an archived isolated execution workspace in place (#11322)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work
> - Issue execution uses isolated workspaces that hold the issue
worktree
> - A terminal issue can leave its isolated workspace archived and
unable to resume
> - The existing closed-workspace guards returned a conflict and gave
the user no self-serve recovery
> - This pull request reopens the same isolated workspace row and
rebuilds its worktree
> - The benefit is that resume, checkout, and comment actions can
continue without a new workspace row
## Linked Issues or Issue Description
**Problem or motivation**
A terminal issue can point to an archived isolated execution workspace.
Resume, checkout, and comment actions then stop with a conflict.
**What happened?**
A terminal issue kept its issue-to-workspace link after the isolated
workspace reached a closed status. The guarded actions returned HTTP 409
instead of restoring access.
**Expected behavior**
The next authorized resume, checkout, or comment action reopens the same
isolated workspace row. The action rebuilds the worktree and then
continues.
**Steps to reproduce**
1. Create an issue that uses an isolated execution workspace.
2. Move the issue to a terminal state and let the workspace archive.
3. Try to resume the issue or add a comment.
4. Observe the closed-workspace conflict.
**Paperclip version or commit**
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Nicky LeachandClaude Opus 4.8
|
04bf7a6ab5 |
feat(observability): instrument stage.sync host steps and home the agent process span (#11301)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - It runs each agent in a remote sandbox and emits OpenTelemetry spans for the sandbox bring-up and the run. > - A real trace showed two gaps. `stage.sync` had about 3 seconds of unattributed host work before its `pack` span. The persistent agent process showed a `sandbox.exec` span that outlived its parent by about 50 seconds. > - The gaps hide real cost and make the trace read as a sequencing bug, so an operator cannot see where startup time goes. > - This pull request wraps the two pre-`pack` host steps in their own spans. It also homes the long-lived process in a run-scoped `sandbox.agentProcess` span. > - The benefit is that startup time is fully attributed and the process reads as a resource that overlaps the turn, not a child that outlives its parent. ## Linked Issues or Issue Description No public issue exists. This is an enhancement to existing telemetry. It is described inline below, following `.github/ISSUE_TEMPLATE/enhancement.yml`. Prior related work: the merged PR #10999 added the run-time wrapper spans and the telemetry data-contract section this PR extends. **What existing behavior does this improve?** The sandbox bring-up and run OpenTelemetry trace. It closes two attribution gaps in that trace. **Subsystem affected** Observability for sandbox execution. The code lives in `packages/adapter-utils`. The span contract lives in `packages/shared/src/telemetry`. **Current behavior** `stage.sync` opens a `pack` span, but the git enumeration and the baseline content-hash walk that run before `pack` have no span, so about 3 seconds read as a gap. On the streamed process-session path the agent process launches fire-and-forget inside the ~2.3 second `bridge.process-session` bring-up step, so its `sandbox.exec` span parents to that step and then runs about 50 seconds. The child dangles past its parent and overlaps `agent.turn`. **Proposed behavior** Wrap the two pre-`pack` host operations in `snapshot.git` and `snapshot.baseline` spans under `stage.sync`. Wrap the streamed launch in a run-scoped `sandbox.agentProcess` span that parents to the live run root (`task.run` at launch). **Reason and benefit** Startup time is fully attributed. The long-lived process reads as a resource that overlaps the sibling `agent.turn`, not a mis-parented child. **Breaking changes** None. The spans are opt-in and export only when an OTLP endpoint is configured. The span seam is a no-op when no runner is injected. No first-party telemetry event changes. ## What Changed - `sandbox-managed-runtime.ts`: add `snapshot.git` and `snapshot.baseline` spans around the git enumeration and the baseline content-hash walk, nested under `stage.sync`, through a shared `runStepSpan` helper that `pack` now also uses. - `execution-target.ts`: wrap the fire-and-forget streamed launch in a run-rooted `sandbox.agentProcess` span, so it parents to the live run root and holds the inner `sandbox.exec`. The `.then`/`.catch` chain became try/catch inside the span callback, with identical frame-ingestion behavior. - `packages/shared/src/telemetry/README.md`: update the span table and the parenting prose. Add `snapshot.git`, `snapshot.baseline`, `pack`, and `sandbox.agentProcess`, and document the intended `sandbox.agentProcess` / `agent.turn` overlap. - Tests: update the executor span-tree test (`childNames` and parent assertions), update the `sandbox-managed-runtime` span-set and nesting tests, and add two `execution-target-sandbox` tests (the launch opens `sandbox.agentProcess`; it parents to the run root, not the bring-up step). ## Verification - Run `npx vitest run` on the three affected test files. Result: 174 tests pass. This includes the updated executor span-tree test and the new `sandbox.agentProcess` open and parenting tests. - Run `tsc --noEmit` in `packages/adapter-utils`. Result: no errors in the changed source or test files. - The full 37-test streamed process-session suite passes unchanged. This confirms the try/catch restructure preserves frame delivery and exit/error behavior. - Pre-existing and unrelated to this PR (present on `master`): `tsc` errors in `execute.ts` / `execute.test.ts` / `remote-spawn-smoke.test.ts` (`onAgentStderr` / `spawnCwd`), and a `check:forbidden-tokens` failure from internal `PAP-###` ids in `ui/src/components/IssueRecoveryActionCard.test.tsx`. This PR does not touch those files, and its own diff is token-clean. ## Risks Low. The change adds instrumentation on the opt-in span path and does not change control flow on the default path. The one production restructure is the streamed launch, which stays fire-and-forget, so bring-up does not block on it. Only the streamed path gains `sandbox.agentProcess`; the legacy poll path launches the process detached and has no host-side long-lived span to home. ## Model Used Anthropic Claude Opus 4.8 (`claude-opus-4-8`), about 200K-token context, agentic tool use through Claude Code. The trace was reviewed through the Honeycomb MCP. The code was written and tested with the model. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com> |
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|
e31951a17d |
feat: Claude agent setup-token login in a sandbox (#11286)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Claude agents that run in a remote sandbox need a safe in-product login path > - The existing host login route cannot open a pseudo-terminal inside that sandbox > - The login flow must protect the browser code, the login URL, and the OAuth token at every step > - This pull request adds the parser, the runner, a Daytona pseudo-terminal transport, and a guarded, owner-bound session route behind an injectable transport > - The route stays inert in the default build and fails closed until a sandbox provider binds the live transport > - The benefit is a company-scoped setup-token flow with one-time secret delivery, redaction, and fail-closed transport checks, ready for a later staged production rollout ## Linked Issues or Issue Description **Agent or provider** Claude Code setup-token login for sandbox agents. **Why this adapter is useful** Sandbox agents need a supported way to sign in without host credentials. An authorized owner completes the browser step and receives the token one time. **How the agent is invoked** When a sandbox provider binds the injectable transport, the server starts `claude setup-token` through a sandbox pseudo-terminal, sends the browser code to the matched prompt, and returns the token through the guarded session route. The default build does not bind the transport. In that state the start route fails closed with a fixed no-secret `503`. It does not start a process and it does not hold a sandbox lease. **Additional context** The transport is injectable, so each sandbox provider binds its own pseudo-terminal. This pull request adds the Daytona transport but does not bind it in the production server. A production wiring needs a lease manager, a live pseudo-terminal factory, a durable token store, and its own security review. The route keeps secrets out of logs, activity details, errors, telemetry, and non-owner responses. ## What Changed - Add strict parsers for the setup-token URL, the prompt, and the success token. - Add a login runner that drives the `claude setup-token` command through a pseudo-terminal. - Add the Daytona pseudo-terminal transport and the sandbox plugin wiring. - Add a company-scoped, owner-bound login session service with rate limits, a reaper, cleanup, and one-time token delivery. - Add the guarded session routes at `/agents/:id/setup-token-login-sessions/*` behind an injectable transport. The routes become the live login path only when a provider binds the transport. - Keep the start route fail-closed in the default build. It returns a fixed no-secret `503` and it does not bind `setupTokenLogin`. - Keep the existing host route `POST /agents/:id/claude-login` in place. This pull request does not replace it. - Keep confidential responses behind a fail-closed TLS transport guard with `Cache-Control: no-store`, and extend redaction for the new fields. - Export the parser and the runner from the Claude local server entry, and document the new session routes in the OpenAPI spec. ## Verification - `pnpm --filter @paperclipai/server exec vitest run setup-token-route setup-token-session` - `pnpm --filter @paperclipai/adapter-claude-local exec vitest run` - `pnpm --filter @paperclipai/server run typecheck` - Confirm that the pull request checks pass on GitHub. ## Risks - Low user-facing risk on merge. The default build does not bind the transport, so the production start route stays fail-closed with a `503`. The merge does not change the production login behavior. - When a provider later binds the transport, the flow starts a live sandbox process and holds a short-lived in-memory secret. Cleanup must stop the child before it releases the sandbox lease. - The transport guard fails closed when the deployment does not provide a trusted TLS path. A wrong proxy allowlist can block a valid request. - The production wiring is out of scope. It needs a lease manager, a live pseudo-terminal factory, a durable token store, and its own security review before the server binds `setupTokenLogin`. ## Model Used Anthropic Claude Opus 4.8 assisted the implementation. It used extended reasoning, code execution, repository tool use, and a 200,000-token context window. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes (the OpenAPI spec covers the new session routes; no user-facing documentation needs changes) - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com> |
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Nicky LeachandPaperclip
|
f1931d0e14 |
test(server): fix flaky workspace-busy retry-row read race (#11293)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The server heartbeat system records each agent run and its retry state > - A workspace-busy deferral cancels one run before it inserts the scheduled retry row > - The test helper can return after the cancel write and before the retry-row insert > - A direct read can then return no row and fail a valid retry assertion > - This pull request makes presence reads wait for the retry row > - The benefit is stable test coverage without a production behavior change ## Linked Issues or Issue Description Refs: #10806 **What happened?** The workspace-busy test read the retry row after the first deferral write. The helper returned before the scheduled-retry insert completed. The read then returned no row and failed the retry assertions. **Expected behavior** The test must wait until the scheduled-retry row exists before it checks retry-row fields. The production write order must stay unchanged. **Steps to reproduce** 1. Add a 300 ms delay between the deferral writes. 2. Run `server/src/__tests__/heartbeat-workspace-busy.test.ts`. 3. Observe failures at retry-row presence checks. 4. Add the bounded polling helper. 5. Run the test file again and observe that all presence checks pass. **Paperclip version or commit** Commit `d9b6e8a6e62b9b56919fc9c52d294e8ac569f70f`. **Deployment mode** Local test run from source. ## What Changed - Add `waitForRetryRun`, which polls for the retry row with a 10 second timeout and a 50 millisecond interval. - Use the helper at every test site that reads a retry row after deferral. - Keep direct reads at absence assertions. - Keep production code unchanged. ## Verification - Injected a temporary 300 millisecond delay between the two production writes and reproduced the five presence-site failures. - Applied the helper with the delay and passed the test file 15 out of 15 times. - Removed the temporary production delay. - Ran the changed test file 25 consecutive times with 0 failures. - Ran TypeScript checks for the changed test file with no errors. ## Risks Low risk. This pull request changes test code only. The helper has a bounded timeout. Production behavior and retry-row assertions remain unchanged. ## Model Used OpenAI Codex, GPT-5, reasoning mode, tool use, and code execution. The runtime does not expose the context window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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6a5b293240 |
test(server): fix onboarding first-task teardown foreign-key race (#11284)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The server coordinates issue work and heartbeat runs. > - The onboarding first-task route sends an assignment wake in the background. > - The route test removes related database rows during teardown. > - A late heartbeat run can keep foreign-key child rows alive during teardown. > - This pull request drains the wake and deletes run rows in foreign-key order. > - The benefit is a stable test that keeps the onboarding behavior unchanged. ## Linked Issues or Issue Description **What happened?** The onboarding first-task route sent a background assignment wake. The test teardown removed parent rows before the wake-created heartbeat rows finished. **Expected behavior** The test teardown should wait for the background wake and remove heartbeat rows before it removes their parent rows. **Steps to reproduce** 1. Run the onboarding first-task route test. 2. Repeat the test many times. 3. Observe an intermittent foreign-key error during teardown. **Paperclip version or commit** Commit `c30fe965920eeb7e7fb88e17574a65bed8fc01a4`. **Deployment mode** Local dev (pnpm dev). **Installation method** Built from source (pnpm dev / pnpm build). **Agent adapter(s) involved** Not adapter-specific (core bug). **Database mode** Embedded PGlite (default — DATABASE_URL unset). ## What Changed - Stub the server adapter in the route test so the dispatched run finishes at once. - Drain heartbeat runs to quiescence before teardown. - Delete heartbeat runs and child rows before their parent rows. - Delete runtime state and company skill rows in foreign-key order. - Keep the route behavior and all three test assertions unchanged. ## Verification - Run `pnpm exec vitest run src/__tests__/issue-onboarding-first-task-routes.test.ts` from the `server` package. - The author ran the suite 25 times with 25 passes. - The suite reproduced the teardown foreign-key error before this change. ## Risks Low risk. This change affects one test file and does not change product code or route behavior. ## Model Used OpenAI GPT-5. The model used tool calls and code review assistance. The exact context window and reasoning mode were not exposed in this run. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
f9bd0438e1 |
fix(server): stop terminal workspace reaper starving on oldest candidates (#11238)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The server runs a scheduled reaper that archives terminal workspaces after it checks their state. > - The reaper reads candidates in `updatedAt` order and skips candidates that do not qualify for archive. > - The fixed page kept the same skipped candidates at the front, so the reaper did not inspect later eligible workspaces. > - This pull request adds a keyset cursor and a throttled log for sweeps that archive no workspace. > - The benefit is that the reaper inspects all candidates over time and reports an inert sweep. ## Linked Issues or Issue Description **What happened?** The terminal workspace reaper inspected a fixed page of old candidates. Ineligible candidates stayed in that page, so the reaper skipped later eligible workspaces on every sweep. **Expected behavior** The reaper must inspect each candidate over time and archive every eligible terminal workspace. **Steps to reproduce** 1. Create more than 50 terminal workspace candidates. 2. Keep the oldest page ineligible for archive. 3. Place an eligible workspace after that page. 4. Run repeated reaper sweeps. 5. Observe that the later eligible workspace remains unarchived. **Paperclip version or commit** Commit `3efdf555e6e14a46747c796c3c554438bfc03261`. **Deployment mode** Built from source with the server test suite. **Installation method** Built from source. **Agent adapter(s) involved** Not adapter-specific (core bug). **Database mode** Not database-related. ## What Changed - Add a keyset cursor that uses `(updatedAt, id)` order across reaper pages. - Reset the cursor at the end of the candidate set so the next sweep starts at the beginning. - Add a throttled log when a sweep inspects candidates but archives none. - Add regression tests for archive delivery and starvation. ## Verification - `pnpm --filter @paperclipai/server exec vitest run src/__tests__/execution-workspaces-service.test.ts` — 45 tests pass. - `pnpm --filter @paperclipai/server exec vitest run src/__tests__/server-startup-feedback-export.test.ts` — 16 tests pass. - `pnpm --filter @paperclipai/server typecheck` — clean. ## Risks Low risk. The change affects only candidate paging and the related reaper log. The cursor resets after the candidate set, so the sweep remains periodic. ## Model Used Codex, OpenAI GPT-5, extended reasoning, tool use, and code execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above (no exact duplicate found; related scheduler PR #10911 is distinct) - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes (no documentation applies; this is an internal reaper behavior change) - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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e5a7fd7038 |
Add sandbox device-login for the Codex adapter (#11237)
## Thinking Path > - Paperclip helps people manage AI agents for work. > - Agent adapters connect Paperclip to tools such as the Codex command line tool. > - A sandboxed Codex agent may start without a credential. > - The operator needs a safe sign-in flow that does not expose credentials to the shared package or the sandbox. > - This pull request adds a company-scoped device-login flow with a temporary Daytona sandbox. > - The flow promotes the credential only after readiness checks pass and removes the temporary sandbox after use. > - The result lets an operator sign in to a sandboxed Codex agent from the agent form. ## Linked Issues or Issue Description **Subsystem affected** Cross-cutting (multiple of the above) **Problem or motivation** A Codex adapter that runs in a sandbox cannot authenticate when the company has no pre-provisioned Codex credential. **Proposed solution** Add a company-scoped device-login session. Start a temporary sandbox, run `codex login --device-auth`, stream the code and URL, verify readiness, promote the credential, and delete the sandbox. **Alternatives considered** Pre-provisioning a credential does not support first-time sandbox login. Keeping the credential in the login sandbox does not provide a durable company credential. **Roadmap alignment** This supports the roadmap item for cloud and sandbox agents. **Additional context** The flow uses a five-minute cleanup reaper, compare-and-set status changes, and a PostgreSQL advisory lock to protect promotion and cleanup. ## What Changed - Add the adapter login-session contract, database table, and migration. - Add company-scoped server routes and a service for sandbox device login. - Add credential promotion, readiness checks, and cleanup after login. - Add restart-safe cleanup for abandoned login sandboxes. - Add sandbox login controls to the agent creation and edit forms. - Keep device-login and vendor identifiers out of public shared and adapter UI symbols. ## Verification - `pnpm --filter @paperclipai/adapter-codex-local exec vitest run` passed with 310 tests at the submitted commit. - The server login route, service, and reaper tests passed with 45 tests at the submitted commit. - The agent form render tests passed with 26 tests at the submitted commit. - The public-symbol leak check passed at the submitted commit. - A live Daytona sign-in flow still requires confirmation by a user with a live sandbox. ## Risks The migration adds a new company-scoped table. A promotion or cleanup race could remove a credential or leave a sandbox active, so the service uses claims, compare-and-set transitions, and an advisory lock. The live Daytona flow needs operator confirmation because local tests do not provide a real browser sign-in. ## Model Used OpenAI Codex, GPT-5, tool use and code execution, extended reasoning. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandClaude Opus 4.8
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67001ec6eb |
chore(db): treat Drizzle migration snapshots as binary in diffs (#11254)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Paperclip stores its state in a Postgres database, managed in `packages/db`. > - The schema uses Drizzle. `drizzle-kit` writes a full-schema snapshot to `packages/db/src/migrations/meta/` for every migration. > - Each snapshot is a large generated JSON file. One snapshot is about 39k lines. > - PR #11240 marked these files `linguist-generated=true`. That collapses the file view and drops the files from language stats. > - But `linguist-generated` does not change the PR line-count badge. Git still counts every snapshot line, so a PR that adds one migration shows a ~39k-line badge (two migrations show ~78k). PR #11237 shows +84,665 for this reason. > - This pull request adds `-diff` to the same files, so git treats them as binary and their lines leave the +/- count. > - The benefit is a pull request badge that reflects the real code change, not generated snapshot noise. ## Linked Issues or Issue Description No existing issue. This is a small follow-up to merged PR #11240. Description follows the enhancement template: **Problem / Motivation** PR #11240 marked `packages/db/src/migrations/meta/**` as `linguist-generated=true`. That attribute collapses the diff in the Files-changed view and removes the files from language stats, but it does not remove their lines from the PR additions/deletions badge. Each Drizzle snapshot is a full copy of the schema (~39k lines), so any PR that adds a migration still shows a huge line count. PR #11237 shows +84,665, of which ~78k are two generated snapshots. **Proposed Solution** Add `-diff` to the same glob. Git then treats the snapshots as binary. `git diff --numstat` reports `-` for these files, so their lines leave the +/- badge and GitHub shows "Binary file not shown" in place of the full JSON. **Alternatives Considered** - Keep only `linguist-generated`: leaves the misleading ~39k/78k badge on every migration PR. - Use the `binary` macro (`-diff -merge -text`): also disables EOL normalization. This repo has open CRLF/LF work, so `-text` is left unset on purpose. ## What Changed - Added `-diff` to `src/migrations/meta/**` in `packages/db/.gitattributes`. - Kept `linguist-generated=true` (language stats) and `-merge` (no auto-merge of generated snapshots). - Left `-text` unset on purpose, so end-of-line normalization stays intact. - Left the `.sql` migration files untouched, so their diffs stay visible for review. ## Verification Check the attributes and confirm the snapshot is now treated as binary: ``` git check-attr linguist-generated diff merge -- \ packages/db/src/migrations/meta/0031_snapshot.json \ packages/db/src/migrations/0009_fast_jackal.sql git diff --numstat origin/master...origin/feat/adapter-sandbox-login -- \ packages/db/src/migrations/meta/0214_snapshot.json ``` Expected: ``` packages/db/src/migrations/meta/0031_snapshot.json: linguist-generated: true packages/db/src/migrations/meta/0031_snapshot.json: diff: unset packages/db/src/migrations/meta/0031_snapshot.json: merge: unset packages/db/src/migrations/0009_fast_jackal.sql: linguist-generated: unspecified packages/db/src/migrations/0009_fast_jackal.sql: diff: unspecified packages/db/src/migrations/0009_fast_jackal.sql: merge: unspecified - - packages/db/src/migrations/meta/0214_snapshot.json ``` The snapshot reports `-` in numstat (binary, not counted). The `.sql` migration keeps normal diff behavior. GitHub reads the rule from the PR tree, so the badge drops on the next PR that touches these files. ## Risks Low risk. The change only affects how git and GitHub render and count generated files. It does not touch application code, the schema, or any migration. - With `-diff`, GitHub and local `git diff` no longer show a text diff for a snapshot. This is intended; the files are generated and are not reviewed by hand. The raw file is still viewable. - `-text` is left unset, so this change does not affect the CRLF/LF handling that other PRs (for example #8922) address. ## Model Used Claude Opus 4.8 (Anthropic), model ID `claude-opus-4-8`, used through Claude Code with extended thinking and tool use. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass — not applicable; this change touches no code path, only git/GitHub file handling - [x] I have added or updated tests where applicable — not applicable; `.gitattributes` behavior is verified with `git check-attr` and `git diff --numstat` (see Verification) - [x] I have updated relevant documentation to reflect my changes — not applicable; the `.gitattributes` file documents its own rules inline - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com> |
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Nicky LeachandClaude Opus 4.8
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c0bdf26633 |
chore(db): collapse Drizzle migration snapshot diffs and block auto-merge (#11240)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Paperclip stores its state in a Postgres database, managed in `packages/db`. > - The schema uses Drizzle. `drizzle-kit` writes a full-schema snapshot to `packages/db/src/migrations/meta/` for every migration. > - Each snapshot is a large generated JSON file. One snapshot is over 200 KB. > - GitHub shows these files as 30k+ line diffs in a pull request. The diffs add no review value, because a human never edits the files. > - The files also merge badly. `drizzle-kit` computes the `id`/`prevId` chain and the full schema state, so a line-level merge of two snapshots produces a file that no real `generate` run creates. > - This pull request adds a `.gitattributes` file that marks the snapshot directory as generated and blocks its auto-merge. > - The benefit is clean pull request diffs and a loud conflict that forces the correct fix when two branches add a migration. ## Linked Issues or Issue Description No existing issue. This is a small repository-hygiene change. Description follows the enhancement template: **Problem / Motivation** Every migration adds a full-schema snapshot JSON under `packages/db/src/migrations/meta/`. These files are large and generated. GitHub renders them as 30k+ line diffs in pull requests, which buries the real change (the `.sql` migration) in noise. The files also have no meaningful line-level merge: `drizzle-kit` computes each snapshot's `id`/`prevId` chain and full schema state. **Proposed Solution** Add `packages/db/.gitattributes`: - `linguist-generated=true` on `src/migrations/meta/**` — GitHub collapses the diff and drops the files from language stats. - `-merge` on the same glob — git refuses the line-level merge and raises a conflict instead of fabricating an invalid snapshot. **Alternatives Considered** - `-diff` / `binary`: hides the diff completely and blocks text merge, but also blocks any local `git diff` and gives a worse conflict experience. `linguist-generated` keeps the file expandable and text-based, so it is the lighter option. - Do nothing: leaves the noisy diffs and the risk of a silent bad merge. ## What Changed - Added `packages/db/.gitattributes`. - Marked `src/migrations/meta/**` as `linguist-generated=true` to collapse the snapshot and journal diffs on GitHub. - Set `-merge` on the same files so git raises a conflict instead of auto-merging generated snapshots. - Left the `.sql` migration files untouched, so their diffs stay visible for review. ## Verification Run `git check-attr` against the affected files and a control `.sql` file: ``` git check-attr linguist-generated merge -- \ packages/db/src/migrations/meta/0031_snapshot.json \ packages/db/src/migrations/meta/_journal.json \ packages/db/src/migrations/0009_fast_jackal.sql ``` Expected output: ``` packages/db/src/migrations/meta/0031_snapshot.json: linguist-generated: true packages/db/src/migrations/meta/0031_snapshot.json: merge: unset packages/db/src/migrations/meta/_journal.json: linguist-generated: true packages/db/src/migrations/meta/_journal.json: merge: unset packages/db/src/migrations/0009_fast_jackal.sql: linguist-generated: unspecified packages/db/src/migrations/0009_fast_jackal.sql: merge: unspecified ``` The snapshot and journal files carry both attributes. The `.sql` migration keeps its normal diff and merge behavior. GitHub applies the rule from the pull request tree, so the collapse shows on the next pull request that touches these files. ## Risks Low risk. The change only affects git and GitHub display and merge behavior for generated files. It does not touch application code, the schema, or any migration. - `-merge` leaves the current-branch version in the working tree on conflict and marks the file conflicted. It does not insert conflict markers into the JSON. The correct resolution stays "renumber the later migration and regenerate", then commit. - Related open pull requests #879 and #8922 also add `.gitattributes` rules for migration files, but for CRLF/LF hash mismatches on Windows. If either lands, a follow-up can merge the rules into one file. There is no functional overlap with this change. ## Model Used Claude Opus 4.8 (Anthropic), model ID `claude-opus-4-8`, used through Claude Code with extended thinking and tool use. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass — not applicable; this change touches no code path, only git/GitHub file handling - [x] I have added or updated tests where applicable — not applicable; `.gitattributes` behavior is verified with `git check-attr` (see Verification) - [x] I have updated relevant documentation to reflect my changes — not applicable; the `.gitattributes` file documents its own rules inline - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com> |
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Nicky LeachandPaperclip
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8f478242f1 |
fix(adapter-utils): close sandbox stdin file race with atomic write and fault-tolerant poller (#11235)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Agent adapters use execution targets to exchange input and output with sandbox processes > - The sandbox input path can expose partial files, and the poller can delete or stop on invalid input > - These timing windows can lose agent input without a clear error > - This pull request makes host writes atomic and makes the poller retry invalid files before it drops them > - The benefit is reliable sandbox input delivery with visible failure after bounded retries ## Linked Issues or Issue Description Closes #10874 ## What Changed - Decode host input into a temporary file, then rename it onto the final JSON path. - Apply the same atomic write pattern to the filesystem client. - Parse each input file before deletion. - Retry parse failures and drop a file after the bounded retry limit with an error event. - Add regression tests for empty, partial, and permanently malformed input files. ## Verification - `pnpm exec vitest run packages/adapter-utils/src/execution-target-stdin-race.test.ts` passes 5/5 tests. - Related sandbox callback, execution target, and sandbox execution suites pass 71/71 tests. - TypeScript checks pass for the changed files. - The regression suite fails on the old code and passes on this change. ## Risks - Low risk. The change affects sandbox input file handling and adds bounded retry behavior. - A permanently malformed file now creates an error event after the retry limit. > This bug fix does not add a core feature, so a roadmap change is not needed. ## Model Used Codex, OpenAI GPT-5, current agent runtime, large context window, tool use and code review support. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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459469638e |
feat(adapter-codex-local): add secure device-login building blocks (#11097)
## Thinking Path > - Paperclip connects AI agents to local and remote runtimes. > - The Codex local adapter needs a safe device-login flow. > - A future sandbox integration needs strict prompt validation, secret protection, cleanup, and private credential storage. > - This pull request adds tested building blocks for that flow. > - The result gives a later Daytona integration a clear security boundary. ## Linked Issues or Issue Description No public issue covers this change. **Problem or motivation** The Codex local adapter has no safe, reusable flow to prove device login inside an isolated sandbox. **Proposed solution** Add parser, runner, credential export, and proof helpers. Validate the prompt, protect login data, store credentials in a private run-scoped home, and dispose all sandbox resources. **Alternatives considered** Do not connect a production Daytona driver in this change. Use an injected sandbox driver and focused tests first. This keeps the security controls testable before live provider integration. **Roadmap alignment** The change extends the Codex local adapter. It does not add a core Paperclip route or duplicate a planned core feature. **Additional context** The flow keeps the login URL, code, and token out of logs, results, and errors. The proof home uses a company-scoped root and a run-scoped private directory. ## What Changed - Add a pure parser for the exact Codex device-login URL and one-time code shape. - Add a sandbox runner with prompt handling, timeout, cancellation, and disposal. - Add a credential export step with company scoping, path checks, payload checks, private modes, locking, and cleanup. - Add redacted device-login fixtures and focused tests for parsing, secret redaction, runner outcomes, credential export, and cleanup. ## Verification - Run `pnpm --filter @paperclipai/adapter-codex-local exec vitest run`. - Run `pnpm --filter @paperclipai/adapter-codex-local exec tsc --noEmit`. - Review tests for strict URL and code validation, timeout, cancellation, disposal, secret redaction, path safety, payload safety, file modes, and cleanup. ## Risks - This change provides building blocks, not a live Daytona proof. - A later integration must connect the runner to a concrete sandbox driver. - Credential export depends on existing Codex authentication cache helpers. - Incorrect path or payload assumptions can reject valid credentials. ## Model Used Codex, GPT-5, tool use, code execution, and repository review. The Paperclip runtime controls the exact context window and reasoning mode. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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|
Nicky LeachandPaperclip
|
d5208d30c1 |
feat(adapter-utils): add host-side pack span to managed-runtime tarball build (#11072)
## Thinking Path > - Paperclip runs AI agents through adapter execution services. > - The adapter runtime records spans for each stage of agent startup. > - The managed runtime packs workspace tarballs before it uploads them. > - These pack operations had no host span, so `stage.sync` omitted pack time. > - This pull request adds one `pack` span around both tarball builds. > - The span nests under the active `stage.sync` step and improves trace detail. ## Linked Issues or Issue Description **What existing behavior does this improve?** The managed runtime workspace sync builds a git-history tarball and a workspace-overlay tarball before upload. **Subsystem affected** The change affects `packages/adapter-utils`, which provides adapter execution and managed runtime support. **Current behavior** The host builds both tarballs without an OpenTelemetry span. The `stage.sync` trace therefore omits the host pack duration. **Proposed behavior** The host wraps both tarball builds in one `pack` span. The executor parents this span under the active startup step. **Reason and benefit** The trace shows the time that the host spends packing workspace data. Operators can use the existing runtime span tree to find sync delays. **Breaking changes** None. The default span runner remains a no-op runner, and the existing control flow remains unchanged. ## What Changed - Add an optional `runtimeSpan` runner to the managed runtime preparation path. - Create one host `pack` span around the two workspace tarball builds. - Parent the `pack` span under the active startup step. - Add unit coverage for span emission and span nesting. ## Verification - Run `tsc --noEmit` for `@paperclipai/adapter-utils`. - Run the `@paperclipai/adapter-utils` Vitest suite. - Confirm the suite reports 448 passed tests and 4 skipped tests. - Confirm the trace test records `pack` under `stage.sync`. ## Risks The change adds optional tracing only. The default no-op runner preserves behavior when tracing is not configured. ## Model Used OpenAI Codex, GPT-5, tool use and code execution. The model reviewed the handoff and opened this pull request. The implementation author supplied the commit. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
6b7e0814a0 |
feat(acp): stream Daytona sandbox agent output and remove the host output poll (#11049)
## Thinking Path > - Paperclip is the open source app that manages AI agents for work > - Sandbox providers let agents run in remote and isolated environments > - Daytona session commands need a path that sends agent output to the host without host polling > - Host polling adds delay and repeats provider output work > - This pull request adds typed execute.log notifications and a log sink for incremental output > - This pull request adds an optional ACP session stream with final-result replay protection > - The benefit is lower output delay while the default flags keep current behavior unchanged ## Linked Issues or Issue Description **Subsystem affected** Cross-cutting. The change spans the plugin SDK, Daytona provider, adapter utilities, and server execution services. **Problem or motivation** The Daytona ACP bridge polls a host output file while an agent command runs. This adds delay and can repeat work. The host also needs a safe route for provider output chunks. **Proposed solution** Add a typed `execute.log` notification with host-issued invocation correlation. Add an ordered log sink to the environment execute path. Add an optional ACP session-log path that parses newline-delimited JSON frames and removes the host output poll for that path. **Alternatives considered** Keep the output-file poll as the only path. This keeps the current behavior but does not provide timely output. The new path stays behind flags, so the existing path remains the default fallback. **Roadmap alignment** This change supports the shipped Cloud / Sandbox agents milestone in `ROADMAP.md`, including Daytona support. ## What Changed - Add the typed `execute.log` worker-to-host notification and company-scoped host route. - Add ordered `stdout` and `stderr` chunk delivery before the final execute result. - Add the Daytona session log sink and the optional ACP streamed session path. - Add monotonic frame handling so live and final output reach the host once. - Keep `useLogStream` and `streamAgentSessionOutput` off by default. - Add unit and integration coverage for the notification, execution target, runtime, and Daytona paths. ## Verification - Run adapter-utils tests: 445 tests pass locally. - Run server environment tests: 73 tests pass locally. - Run Daytona plugin tests: 131 tests pass locally. - Run TypeScript checks for shared, adapter-utils, and server. - Review the pull request checks after GitHub completes them. - All required GitHub checks pass on the current head. ## Risks The new paths change output delivery only when a feature flag enables them. The final execute result remains available for parsing and fallback. The main risk is a provider stream or frame-order error; the final-result parser limits that risk. ## Model Used OpenAI Codex, GPT-5, tool use and code execution. The runtime did not supply a context-window value. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes No operator documentation change applies because both new flags remain disabled by default. - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
01b51dc0e5 |
fix(runtime): stop Live badge and Working shimmer after task teardown (#10985)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The task list and the chat views show a Live badge and a Working shimmer for an issue that has an active run. > - A finished task kept the Live badge and the Working shimmer after the run ended and the sandbox stopped. > - The user interface reads run liveness from the `heartbeat_runs.status` row. The run finalizer writes the terminal status in a step that is separate from the agent `status=done` update. When the sandbox or the run process stops between the two steps, `heartbeat_runs.status` stays `running` forever. > - A run row that stays `running` makes a finished task look perpetually Live, and the user interface has no guard for an issue that already reached a terminal status. > - This pull request closes the invariant "environment lease released implies the run is terminal" on the server, and adds a user interface guard that suppresses live state for a terminal issue. > - The benefit is that a finished task stops showing Live and Working, both at the source (the run row) and at the surface (the badge and the shimmer). ## Linked Issues or Issue Description **Bug description** - A completed task kept the Live badge and the Working shimmer after its run ended and the sandbox was torn down. **Steps to reproduce** - Run an agent task to completion. Let the sandbox tear down while the run finalizer is between the `status=done` update and the terminal run-status write. - Open the task list or the chat view for the finished task. **Expected behavior** - A finished task shows no Live badge and no Working shimmer. **Actual behavior (before this change)** - The finished task showed the Live badge and the Working shimmer because its `heartbeat_runs.status` row stayed `running`. This pull request supersedes the two separate pull requests #10954 (frontend) and #10955 (backend). It carries all of their changes for the same race. ## What Changed Server: - Run teardown terminalizes a still-running or still-queued run before it releases the environment lease. It writes `succeeded` when the issue already reached `done`, `cancelled` when the issue is `cancelled`, and `interrupted` otherwise. It never overwrites a status that another path already made terminal. - The recovery stale-lock sweep terminalizes an orphaned running run to `interrupted` after it confirms the process and the sandbox are both gone. It requires recorded process metadata, so it never terminalizes a live run, a queued run, or a scheduled retry. - Each terminal transition writes a run event. - The stale-lock sweep continues and clears the lock when the audit write fails. It logs the failure loudly. - New server tests cover both invariants. User interface: - A shared guard suppresses the Live badge and the Working shimmer when the issue status is terminal. - The guard keeps non-terminal `queued` and `running` issues live. - The guard prefers the newest issue live-status snapshot. - New user interface tests cover the guard and the snapshot preference. ## Verification Server: - `pnpm --filter @paperclipai/plugin-sdk ensure-build-deps && tsc --noEmit` in `server/` — 0 errors. - `pnpm --filter server test heartbeat-run-lease-release-terminalization.test.ts recovery-stale-issue-lock-sweep.test.ts` — 12 tests pass. User interface: - `pnpm --filter @paperclipai/ui typecheck` — 0 errors. - `pnpm exec vitest run ui/src/lib/liveIssueIds.test.ts ui/src/lib/issue-chat-messages.test.ts` — 40 tests pass. ## Risks - Low risk. The server change only forces a still-live run row to a terminal status when the lease releases or when the recovery sweep confirms the process is dead. It never overwrites an existing terminal status, and it guards the recovery path with process metadata to avoid terminalizing a live run. - The user interface change is additive. The guard only suppresses live state for a terminal issue and keeps queued and running issues live. - No database migration. No change to any external endpoint. ## Model Used - Claude Opus 4.8 (`claude-opus-4-8`), extended thinking, tool use, and code execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
4e76227f12 |
feat(plugin-daytona): stream session command logs behind useLogStream (#11021)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Sandbox provider plugins let agents run commands in remote environments. > - The Daytona provider polls the exit code while it waits for command logs. > - Polling delays log delivery and does not support long-lived streamed commands. > - This pull request adds an opt-in Daytona log stream with one reconnect and a poll fallback. > - The benefit is faster log delivery while the existing default path stays unchanged. ## Linked Issues or Issue Description Refs: #10941 **Subsystem affected** packages/plugins — sandbox provider plugins. **Problem or motivation** The Daytona provider polls the command exit code every 50 milliseconds while it waits for logs. This delays output and does not support a long-lived streamed command. **Proposed solution** Add the `useLogStream` provider option. Stream stdout and stderr from the Daytona callback log form, read the exit code after the stream ends, retry the read with bounded backoff, and fall back to the existing poll path after a disconnect. **Alternatives considered** Keep polling for all commands. This keeps the current behavior but does not provide timely logs or a path for long-lived commands. **Roadmap alignment** This supports the roadmap item for cloud and sandbox agents, including Daytona. ## What Changed - Add the opt-in `useLogStream` option with a default of `false`. - Stream stdout and stderr from the Daytona callback log form. - Drop replayed log prefixes by delivered byte offset after reconnect. - Retry once after disconnect, then use the existing poll path. - Read the exit code once after a successful stream and retry when the code is not ready. - Add tests for ordered output, exit-code reads, disconnect fallback, and reconnect replay handling. ## Verification - Run `node_modules/.bin/vitest run --config packages/plugins/sandbox-providers/daytona/vitest.config.ts packages/plugins/sandbox-providers/daytona/src/plugin.test.ts`. - Confirm that the full Daytona plugin test project passes with 127 tests. - Confirm that the changed files type-check against Daytona SDK 0.203.0 types. - Review the PR against parent PR #10941 before it reaches `master`. ## Risks - The stream path changes behavior only when `useLogStream` is `true`. - A stream failure can add one reconnect attempt before the existing poll fallback. - The stream path has no command deadline because it supports long-lived commands. - No endpoint, stored data, telemetry shape, authentication rule, or result shape changes. ## Model Used OpenAI Codex, GPT-5, tool use and code execution. The context window and reasoning mode are not exposed by this run. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
9ace548fd2 |
feat(observability): rename sandbox provider spans and add run-time wrapper spans (#10999)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Paperclip uses adapter and sandbox code to start agents and run sandbox work > - The current sandbox spans use mixed names and do not group related run-time work > - Mixed names make traces harder to read and compare across providers > - This pull request renames provider spans, adds run-time wrapper spans, and keeps the host allowlist closed > - The benefit is clearer traces with the same sandbox behavior and trust boundary ## Linked Issues or Issue Description **What existing behavior does this improve?** This improves OpenTelemetry span names and grouping for sandbox startup, execution, callback relay, and agent session work. **Subsystem affected** Cross-cutting (multiple of the above): adapter utilities, sandbox providers, shared telemetry documentation, and server instrumentation. **Current behavior** Sandbox provider spans use mixed names. Related run-time operations expose inner `sandbox.exec` spans without a named wrapper span. The host mapper uses a closed allowlist for provider span names. **Proposed behavior** Use descriptive provider-scoped span names. Add wrapper spans for agent session input, agent session output polling, and callback relay. Keep the host mapper allowlist closed and map unknown names to `other`. **Reason and benefit** Clear names make traces easier to read and reduce ambiguity during sandbox operation analysis. Wrapper spans show the full operation while preserving the inner execution spans. **Breaking changes** None. This change updates telemetry span names and grouping only. It does not change sandbox behavior, endpoint behavior, or the host trust boundary. **Additional context** Related prior work: [#10758](https://github.com/paperclipai/paperclip/pull/10758). ## What Changed - Rename Daytona provider sync and session spans with descriptive provider-scoped names. - Add three run-time wrapper spans for agent session input, output polling, and callback relay. - Add a shared span runner that preserves no-op behavior without a real tracer. - Keep the host mapper allowlist closed and map unknown names to `other`. - Update telemetry documentation and span-name tests. ## Verification - Focused adapter-utils span tests pass for startup timing, callback relay, and sandbox execution. - Focused Daytona plugin span tests pass for renamed leaf spans and session open or close spans. - Focused server tests pass for host mapping and instrumentation. - The stacked diff contains one commit on top of `feat/daytona-persistent-session-model`. ## Risks - Span names change for existing telemetry consumers. - The wrapper spans add trace structure but do not change sandbox execution. - The host mapper keeps the existing closed allowlist and `other` bucket. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used OpenAI GPT-5 (Codex agent); exact deployment revision and context window are not exposed in this run; tool use and code execution enabled. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
cfed36ea6b |
feat(plugin-daytona): persistent session model with plain command dispatch (#10941)
## Thinking Path > - Paperclip is the control plane for autonomous AI companies > - One core subsystem runs agent work inside sandboxes > - The Daytona provider uses that path to run user commands > - The current one-shot model does not keep a shell alive across commands > - This pull request adds an opt-in persistent session model for Daytona > - The benefit is faster command dispatch with the same sandbox boundaries ## Linked Issues or Issue Description ### Subsystem affected Cross-cutting. This change touches `packages/adapters`, provider tests, span names, and sandbox command behavior. ### Problem or motivation The Daytona provider needs a persistent shell for repeated command dispatch. The old advisory wrapper path does not reach that goal. It also adds cost and removes the session speed gain. ### Proposed solution Add a `useSessions` driver flag. Keep it off by default. Open one Daytona session per lease when the flag is on. Send each user command into that session. Read stdout and stderr from the session logs endpoint. Run each command in a subshell so `exit` does not stop the shell. Remove the advisory `bwrap` wrapper path and its lease metadata. Add session setup and teardown spans. Keep a hard delete on teardown. ### Alternatives considered Keep the advisory `bwrap` wrapper. That path does not give a real persistent session. It also keeps extra command overhead. Keep a one-shot fallback for user commands. That would weaken the session model and hide a missing session case. ### Roadmap alignment This work fits the `Cloud / Sandbox agents` milestone in `ROADMAP.md`. It also supports the control plane goal of safe remote sandbox execution. ### Additional context The handoff verification reported `tsc --noEmit` clean and 119 Daytona unit tests passing. The handoff also reported a clean host span allowlist test and five expected commits on the branch. The security review gate remains required before merge. ## What Changed - Added an opt-in persistent session model for the Daytona sandbox provider. - Routed user commands through `executeSessionCommand` when sessions are enabled. - Removed the advisory `bwrap` command wrapper path and the lease metadata it used. - Added session lifecycle spans and span allowlist coverage. - Documented the leak bound in `DIRECTORY-CONSTRAINT-FINDINGS.md`. ## Verification - `tsc --noEmit` clean for the Daytona plugin, per handoff verification. - Daytona unit suite passes, with 119 tests, per handoff verification. - Host span allowlist test passes, per handoff verification. ## Risks - Persistent sessions can leak if teardown fails. - Session logs must keep stdout and stderr separate. - The flag stays off by default to limit rollout risk. ## Model Used OpenAI GPT-5, Codex, tool use enabled. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
f5e9ca3e89 |
fix(adapters): keep user-scoped env bindings on the agent Test action (#10926)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work
> - The agent Test action builds adapter config from the form.
> - The build-config parser kept plain and secret_ref bindings.
> - It dropped user_secret_ref bindings on the create path.
> - This PR shares one parser that keeps every binding shape.
> - The test path now sends the same env binding set that a real run
sees.
> - The benefit is one fix across every adapter build-config path.
## Linked Issues or Issue Description
**What happened?**
The agent Test action dropped a user-scoped env binding in create mode.
The same agent config worked in a real run. Related public PRs: #10115,
#9321, #9921, #8825.
**Expected behavior**
The Test action should keep user-scoped env bindings and resolve them
like a real run.
**Steps to reproduce**
1. Set a user-scoped env binding on an agent config form.
2. Run Test in create mode.
3. The probe runs without the variable.
**Paperclip version or commit**
|
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Nicky LeachandPaperclip
|
8ac2526811 |
chore(plugin-daytona): pin @daytonaio/sdk to 0.203.0 (#10907)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The Daytona sandbox provider lives in `packages/plugins/sandbox-providers/daytona` > - That plugin depends on `@daytonaio/sdk` for session control and command execution > - The stable SDK version moved forward, but the plugin still used an older pin > - This pull request pins the SDK to the current stable release and keeps the package build and tests green > - The benefit is the plugin uses the current client surface with a very small change set ## Linked Issues or Issue Description **What existing behavior does this improve?** The Daytona plugin keeps an older `@daytonaio/sdk` pin than the current stable release. **Current behavior** The plugin depends on `^0.171.0`. **Proposed behavior** The plugin pins `@daytonaio/sdk` to `0.203.0`. **Reason and benefit** The plugin uses the current stable client. The build and the existing tests still pass with the real 0.203.0 types. The change keeps the tracked diff small. **Breaking changes** None. The package manifest changes only the SDK pin. The workspace package is excluded from the root lockfile. **Additional context** Refs #7333, which updated the same package to `0.183.0`. ## What Changed - Updated `packages/plugins/sandbox-providers/daytona/package.json` to pin `@daytonaio/sdk` at `0.203.0`. - Kept the change limited to the plugin package manifest. ## Verification - `pnpm run build` in the plugin directory passed. - `pnpm exec vitest run --config packages/plugins/sandbox-providers/daytona/vitest.config.ts` passed. - `git status` showed only the one-line manifest change before the PR open step. - `git fetch origin chore/daytona-sdk-0-203-0` returned `d2592644e80dfac2cfae6d9ccc2188267fe75758`. - `git diff --stat origin/master...HEAD` showed only the one manifest file change. ## Risks - Low risk. The change only updates a package pin. - The plugin build and tests already passed against the new SDK surface. - A future SDK release could need a follow-up pin update. ## Model Used OpenAI Codex, GPT-5, tool-use enabled. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used with version and capability details - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [ ] I have added or updated tests where applicable - [ ] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
||
|
Nicky LeachandPaperclip
|
d114c4925e |
feat(observability): give sandbox sync spans true wall-clock width (#10864)
## Thinking Path > - Paperclip keeps company work visible and governed. > - Sandbox agents run serial sync work across worker and host boundaries. > - The current span path hid real wall-clock time for that sync work. > - The host needs safe timestamps if it wants true span width. > - This pull request carries worker timestamps, validates them, and records the real duration. > - The benefit is clearer operator visibility for sandbox sync work. ## Linked Issues or Issue Description **Subsystem affected** Cross-cutting. This touches `packages/plugins`, `server`, and the Daytona plugin test surface. **Problem or motivation** Sandbox sync spans opened and closed in one host call. The native width stayed near zero, so the real time spent in serial round trips was hard to see. **Proposed solution** Carry worker start and end times across the span record protocol. Validate the pair at the host boundary. Record the host span with the true duration when the pair is safe. **Alternatives considered** Keep the numeric duration only. That keeps the data, but it does not widen the span and it does not show the real wall-clock time. **Roadmap alignment** This fits the `Cloud / Sandbox agents` and `Artifacts & Work Products` areas in `ROADMAP.md`. I found no other roadmap item that covers this span-width gap. **Additional context** The host allowlist stays narrow. Unknown names still map to `sandbox.provider.other`. Invalid timestamp pairs still fall back to the synchronous path. Related public PRs: none found. ## What Changed - Added optional `startTimeMs` and `endTimeMs` fields to the `span.record` protocol. - Captured start and end times in the worker tracer and sent them to the host. - Validated host timestamps with finite, ordered, bounded checks before span reconstruction. - Extended the host allowlist to the sandbox sync command names. - Wrapped each inbound sync round trip in its own named span. - Added tests for the worker path, host boundary, host recorder, and Daytona sync flow. ## Verification - `pnpm --filter @paperclipai/plugins-sdk test` - `pnpm --filter @paperclipai/server test` - `pnpm --filter @paperclipai/daytona-plugin test` - `pnpm --filter @paperclipai/server tsc --noEmit` still shows pre-existing `drizzle-orm` duplicate-declaration errors in this sandbox. The changed files do not touch those lines. - GitHub checks are green. - Greptile review is 5/5. - No open review threads remain. ## Risks - A bad timestamp pair can fall back to the synchronous path. - The host clock gate can reject spans if the pair is stale, reversed, or too large. - The new worker fields change the wire protocol, but the public plugin tracer contract stays the same. ## Model Used OpenAI GPT-5, tool-enabled. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used with version and capability details - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either linked existing issues with `Fixes: #` / `Closes #` / `Refs #` or described the issue in-PR following the relevant issue template - [x] I have not referenced internal or instance-local Paperclip issues or links - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
||
|
Nicky LeachandPaperclip
|
7e592c33fa |
feat(codex): add identity-keyed host credential cache (#10853)
## Thinking Path > - Paperclip manages agent work as issues and pull requests. > - This change lives in the Codex local adapter path. > - The host auth flow needs a stable cache per identity. > - The cache must not change the copy-back path or the default store overwrite. > - This pull request adds that cache and keeps the existing flow intact. > - The benefit is repeatable host auth with safer identity scoping. ## Linked Issues or Issue Description **Subsystem affected** - packages/adapters: Codex local adapter and host auth flow **Problem or motivation** - The host auth flow needs one usable credential per identity. - The current flow does not keep that identity state in a separate cache. **Proposed solution** - Add an identity-keyed host credential cache. - Keep the cache company scoped. - Add an opt-in seed mode for the merge decision helper. - Write the cache at copy-back time without changing the default store overwrite. **Alternatives considered** - Store the cache in the instance-global root. - Seed the host default store through an environment flag. - Both choices weaken isolation or caller control, so I did not use them. **Roadmap alignment** - I checked `ROADMAP.md`. - I found no direct overlap with an active roadmap item. - The change fits the core auth and secrets direction. **Additional context** - Local tests passed before I opened this pull request. - I found no direct duplicate pull request for this branch. ## What Changed - Added `codex-auth-cache.ts` for company scoped cache storage and identity anchored vending. - Added `codex-auth-merge-decision.cjs` support for a leading `--seed-if-dest-absent` flag. - Updated `codex-auth-copyback.ts` to write the cache at teardown under the merge lock. - Wired `execute.ts` to use the identity anchored vend before the managed home seed step. - Added `CODEX-AUTH-CACHE.md` for the cache rules, directions, state matrix, off switch, and clear action. - Added and updated tests for cache behavior, merge decision flow, and copy-back flow. ## Verification - `pnpm --filter @paperclipai/adapter-codex-local exec vitest run`. - `node_modules/.bin/vitest run --project @paperclipai/adapter-utils workspace-restore-merge`. - `tsc --noEmit` in `packages/adapters/codex-local`. - `git log --oneline origin/master..origin/feat/codex-auth-identity-cache` shows the expected commits. ## Risks - This change touches credential storage. - A mistake in the cache path could break host auth for one identity. - The tests reduce this risk, but the surface stays sensitive. ## Model Used - OpenAI Codex, GPT-5, tool use enabled. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used with version and capability details - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either linked existing issues with `Fixes:` / `Closes:` / `Refs:` or described the issue in the pull request body - [x] I have not referenced internal or instance-local Paperclip issues or links - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
||
|
Nicky LeachandPaperclip
|
c647b8cc2e |
feat(acpx-engine): give sandbox.exec spans real parents (#10852)
## Thinking Path > - Paperclip uses spans and traces to show how work moves through agents and tools > - sandbox.exec spans need a real parent so the trace tree matches the work tree > - Wrong parent links make execution history hard to read and hard to debug > - This pull request adds a single task.run root span and re-parents live work to the nearest active span > - The change keeps detached work under the closest live span instead of the HTTP root > - The benefit is a clear trace tree for sandbox.exec work and better execution diagnosis ## Linked Issues or Issue Description **What happened?** sandbox.exec spans attached to the wrong parent or to no live parent in some paths. **Expected behavior** Each sandbox.exec span should attach to the nearest live span. **Steps to reproduce** 1. Run work that creates sandbox.exec spans during startup and callback bridge paths. 2. Inspect the trace tree. 3. Observe an orphaned span or a span with the wrong parent. **Paperclip version or commit** `672e9de9c8b004aebc1f08e24b612ab067735ad1` **Deployment mode** Local dev. **Additional context** The branch adds the task.run root span, parents sandbox.startup to it, and re-parents detached bridge work to the nearest live span. ## What Changed - Added a task.run root span for the run tree. - Re-parented sandbox.startup, agent.turn, and detached bridge work to the nearest live span. - Added end-to-end trace-tree assertions for the full parent chain. - Added negative coverage so sandbox.exec does not parent to the HTTP root. ## Verification - Focused Vitest suite passed: `packages/adapter-utils/src/acpx-engine/execute.test.ts`, `packages/adapter-utils/src/acpx-engine/startup-timing.test.ts`, `packages/adapter-utils/src/execution-target-sandbox.test.ts`, `packages/adapter-utils/src/sandbox-callback-bridge.test.ts`, and `server/src/__tests__/environment-execution-target.test.ts`. - Result: 5 files passed, 204 tests passed. - The submitted branch also reported `adapter-utils` checks, `server` seam checks, and `tsc` exit 0 in the handoff state. ## Risks - This change can alter trace tree shape in tools that read parent spans. - A missed bridge path could still point to the wrong live span. - Low risk for runtime behavior, because the change only changes span parent attribution. ## Model Used OpenAI GPT-5, tool-use capable. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [ ] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
||
|
Nicky LeachandPaperclip
|
74416e9cd1 |
fix(server): render company-export YAML iteratively to stop stack overflow (#10854)
## Thinking Path > - Paperclip is the control plane for autonomous AI companies. > - The company export path writes `.paperclip.yaml` data for large companies. > - The YAML renderer used a spread append that can overflow the call stack on large arrays. > - That failure turns a normal export into a 500 for large companies. > - This pull request rewrites the renderer to use an iterative stack and removes the last spread append. > - The benefit is that large exports finish without a RangeError and keep the same output. ## Linked Issues or Issue Description I searched GitHub for related work. I found PR #7506. This pull request closes the last spread site that PR left open. **What happened?** The company export failed with `RangeError: Maximum call stack size exceeded` on large YAML output. **Expected behavior** The export should finish without a stack overflow. **Steps to reproduce** 1. Export a company with a very large YAML payload. 2. Render the export through `renderYamlBlock` or `renderFrontmatter`. 3. Observe that the old spread append can overflow the call stack. **Paperclip version or commit** `79f3a216215500e2ec1a928d5eb5c09364c2abf5` **Deployment mode** Local dev (`pnpm dev`) or built from source. **Additional context** Related public PR: #7506. This change keeps the YAML shape, scalar format, and key order the same. ## What Changed - Reworked `renderYamlBlock` to render iteratively. - Replaced the last spread append in `renderFrontmatter` with a loop. - Added regression tests for high-volume block and frontmatter arrays. ## Verification - `node_modules/.bin/vitest run server/src/__tests__/company-portability.test.ts` - The two new overflow tests pass. - The existing round-trip tests still pass. - `tsc --noEmit` is clean for `server/src/services/company-portability.ts`. ## Risks Low risk. The change keeps exported YAML content and ordering the same. ## Model Used OpenAI GPT-5, tool-using coding agent. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
||
|
Nicky LeachandPaperclip
|
2ab797dcbe |
fix(sandbox): reset step store for long-lived bridge work (#10813)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work
> - Bridge workers keep startup setup separate from long-lived runtime
work
> - The callback bridge must keep queue-directory setup inside the
startup step
> - The long-lived poll loop must run with no active startup step
> - This pull request keeps that boundary in the right place
> - The benefit is correct span parents and correct runtime exec
metadata
## Linked Issues or Issue Description
**Bug**
**What happened?**
Long-lived bridge continuations kept a stale startup step store during
the queue-directory setup path.
**Expected behavior**
Runtime exec spans should start with no active startup step.
**Steps to reproduce**
1. Start a bridge lane.
2. Let the startup step end.
3. Run later runtime exec work on the same lane.
**Paperclip version or commit**
|
||
|
Nicky LeachandClaude Sonnet 4.6
|
bd7a13eb9c |
fix(daytona): replace bwrap user-namespace with su privilege drop (#10805)
## Thinking Path
> - Paperclip runs AI agents inside Daytona sandbox environments
> - The Daytona plugin wraps agent commands in bwrap to prevent
accidental writes outside the workspace
> - bwrap previously used `--unshare-user --uid <uid> --gid <gid>` to
run commands as the sandbox user inside the container
> - This creates a uid_map of `<uid> 0 1` — inside-uid maps to
outside-uid 0 (root)
> - Files owned by the sandbox user (outside-uid 1001) appear as
overflow uid 65534 (nobody) from inside the namespace
> - So all writes to the workspace fail with Permission denied, and the
agent cannot run
> - This PR replaces the user-namespace approach with `su -s /bin/sh
<user>`, which gives the correct uid mapping
> - The benefit is that bwrap works correctly on Daytona: writes succeed
and the advisory isolation is preserved
## Linked Issues or Issue Description
No existing issue. Describing the bug inline per the bug report
template.
**What happened?**
Running a Codex agent in a Daytona sandbox failed immediately. The agent
could not create directories inside the workspace:
```
mkdir /home/daytona/paperclip-workspace/.paperclip-runtime/codex/paperclip-bridge/queue ... failed with exit code 1:
bwrap: Can't find source path /home/daytona/paperclip-workspace: Permission denied
```
Root cause: bwrap used `--unshare-user --uid 1001 --gid 1001` (via
sudo/root). This writes uid_map `1001 0 1` — inside-uid 1001 maps to
outside-uid 0. Files owned by outside-uid 1001 (the workspace) appear as
overflow uid 65534 (nobody) from inside the namespace. `--bind-try`
suppresses ENOENT but not EACCES, so the bind exits 0 and the wrapper
proceeds — but every write inside then fails with Permission denied.
The bwrap capability probe (`sudo -n bwrap --unshare-user --uid 0 --gid
0 --ro-bind / / -- true`) did not test the workspace bind or the su
invocation, so it incorrectly reported bwrap as available.
**Expected behavior**
The agent should start and run normally inside the Daytona sandbox.
Directory creation and file writes in the workspace should succeed.
**Steps to reproduce**
1. Configure Paperclip with a Daytona sandbox provider
2. Start a Codex agent task targeting a Daytona sandbox
3. Observe the `adapter_failed` error: `mkdir ... failed with exit code
1: bwrap: Can't find source path /home/daytona/paperclip-workspace:
Permission denied`
**Paperclip version or commit**
master (reproducible on current HEAD before this fix)
**Deployment mode**
Self-hosted server
**Agent adapter(s) involved**
- [x] Codex
**Relevant logs or output**
```
mkdir /home/daytona/paperclip-workspace/.paperclip-runtime/codex/paperclip-bridge/queue \
/home/daytona/paperclip-workspace/.paperclip-runtime/codex/paperclip-bridge/queue/requests \
/home/daytona/paperclip-workspace/.paperclip-runtime/codex/paperclip-bridge/queue/responses \
/home/daytona/paperclip-workspace/.paperclip-runtime/codex/paperclip-bridge/queue/logs \
failed with exit code 1: bwrap: Can't find source path /home/daytona/paperclip-workspace: Permission denied
(adapter_failed)
```
## What Changed
- Replaced `--unshare-user --uid <uid> --gid <gid>` with `su -s /bin/sh
<username>` in `buildBwrapCommand`. bwrap runs as real root (for
bind-mount capability), then `su` drops into the sandbox user. Inside
uid=1001 maps to outside uid=1001, so workspace files are writable.
- Removed `detectSandboxUidGid` (ran `id -u` + `id -g`). Added
`detectSandboxUsername` (runs `id -un`) — the username is what `su`
needs.
- Updated `detectBwrapAvailable` probe to test the actual invocation:
`sudo -n bwrap --ro-bind / / [--bind-try <workspace> <workspace>] -- su
-s /bin/sh '<user>' -c true`. This catches both the su failure mode and
the EACCES-on-workspace-bind case.
- Updated `detectBwrapCapability` to run sequentially (username first,
then probe with that username and remoteCwd).
- Replaced `sandboxUid`/`sandboxGid` in lease metadata with
`sandboxUsername`.
- All three `detectBwrapCapability` call sites now pass `remoteCwd`.
- Updated `BwrapExecPlan` type and `resolveBwrapExecPlan` to use
`username: string` instead of `identity: { uid, gid }`.
- Updated tests TDD-style: rewrote tests to describe the new behavior
first, then implemented to pass them.
## Verification
**SSH verification** (run against a live Daytona sandbox before writing
the fix):
```bash
# Old approach — fails
sudo -n bwrap --unshare-user --uid 1001 --gid 1001 \
--ro-bind / / --bind-try /home/daytona/paperclip-workspace /home/daytona/paperclip-workspace \
-- sh -c "mkdir -p /home/daytona/paperclip-workspace/test"
# → mkdir: cannot create directory: Permission denied
# New approach — works
sudo -n bwrap --ro-bind / / \
--bind-try /home/daytona/paperclip-workspace /home/daytona/paperclip-workspace \
-- su -s /bin/sh daytona -c "mkdir -p /home/daytona/paperclip-workspace/test && echo ok"
# → ok (files owned by uid 1001)
```
**Unit tests:**
```
cd packages/plugins/sandbox-providers/daytona && npx vitest run
# 114 passed, 2 pre-existing failures (macOS tar compatibility in file-sync.ts, unrelated)
```
## Risks
- `su` must be available in the Daytona sandbox image. It is a standard
POSIX tool present in every image tested. If absent,
`detectBwrapAvailable` returns false and execution falls back to the
unwrapped path (same behavior as before).
- The advisory bwrap wrapper was never a security boundary — it is
best-effort. The behavioral change (root → sandbox user inside the
container) is strictly better: files created by the agent now have the
correct ownership.
- `sandboxUid` and `sandboxGid` are removed from lease metadata. Any
external code reading those fields will get `undefined`. They were only
used internally by `resolveBwrapExecPlan`, which now reads
`sandboxUsername`.
## Model Used
Claude Sonnet 4.6 (`claude-sonnet-4-6`) via Claude Code CLI — tool use
enabled, extended context. The model diagnosed the bug via SSH
inspection, designed the fix, and implemented it TDD-style (tests first,
then implementation).
## Checklist
- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge
---------
Co-authored-by: Claude Sonnet 4.6 <noreply@anthropic.com>
|
||
|
Nicky LeachandPaperclip
|
6a69a3d6b0 |
refactor(observability): stop writing detailed per-step timing to the run log (#10776)
## Thinking Path > - Paperclip tracks agent work for the team. > - The startup timing path already emits detailed spans. > - The run log repeats the same detailed timing. > - That makes the event larger than it needs to be. > - This pull request removes the redundant per-step timing fields from the run-log payload. > - The benefit is a smaller log with the same detail still available in traces. ## Linked Issues or Issue Description No public GitHub issue or open pull request matches this change. I described the enhancement below. **What existing behavior does this improve?** `run.startup.step` event output. **Subsystem affected** Cross-cutting (multiple of the above) **Current behavior** `run.startup.step` writes `roundTrips`, `providerExecMs`, `providerGetMs`, `createRuntimeMs`, and `ensureSessionMs`. The same detail already exists in the spans. **Proposed behavior** `run.startup.step` keeps only `step`, `durationMs`, and `outcome`. The heartbeat lifecycle timestamps stay unchanged. **Reason and benefit** This change removes redundant data from the run log. It keeps the useful detail in trace spans. It also makes the payload smaller and easier to read. The revert path stays clear because the removed data has one producer chain. **Breaking changes** Yes. Consumers that read the removed fields must switch to span data or the remaining event fields. The heartbeat lifecycle timestamps do not change. **Additional context** I searched GitHub for related open PRs and issues. I found no match. ## What Changed - Removed the redundant per-step timing fields from the run-log payload. - Removed the now-dead producer chain that fed those fields. - Kept the span-level timing data and the heartbeat lifecycle timestamps. ## Verification - `adapter-utils` typecheck clean - `server` typecheck clean - `startup-timing` suite: 30 passed - `adapter-utils` `execute` suite: 99 passed - `server` `environment-execution-target` suite: 21 passed ## Risks - Consumers that still read the removed fields will need a code change. - This is a one-way-door data removal for the run log. ## Model Used OpenAI Codex, GPT-5, tool use enabled. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
||
|
Nicky LeachandPaperclip
|
af6b32d82a |
feat(observability): add provider OTel spans - cache-hit flag, plugin tracer, Daytona pack/transfer spans (#10764)
## Thinking Path > - Paperclip uses pull requests to ship control-plane changes with review and audit. > - This change extends sandbox provider telemetry. > - The first PR added startup and exec spans. > - This PR adds provider spans for cache hits, plugin tracer flow, and Daytona file sync steps. > - The host must keep the trust boundary and reject unsafe span data. > - The result is fuller OTel coverage with bounded labels and safe parentage. ## Linked Issues or Issue Description **Problem or motivation** Sandbox provider telemetry lacks an explicit cache-hit signal, plugin span context, and file-sync pack and transfer spans. The current proxy for a cache hit is fragile. The plugin SDK also needs a safe tracer surface and a per-call parent context. **Proposed solution** Add an explicit `cacheHit` flag from the Daytona sandbox handle lookup. Expose `ctx.tracer` on the plugin context and pass a `traceparent` string with each call. Record provider spans on the host with allowlist clamping and capability checks. Wrap Daytona file sync pack and transfer steps in spans. **Alternatives considered** Keep the old `providerGetMs == 0` proxy. Reject that path because the cache-hit decision belongs at the handle lookup, not in a timing proxy. The host stays the trust boundary for worker span data. It clamps labels, rejects bad parent data, and gates the worker-to-host span RPC by capability. A security review completed before this PR opened. ## What Changed - Added an explicit `cacheHit` flag from the Daytona sandbox handle lookup. - Added `ctx.tracer` on the plugin context and a `traceparent` field in the per-call context. - Added host-side span recording with attribute clamping and capability checks. - Wrapped Daytona file sync pack and transfer steps in spans. - Added tests for the host trust boundary, the plugin tracer no-op path, and the Daytona span paths. ## Verification - `pnpm --filter @paperclipai/plugin-daytona exec vitest run` - `pnpm --filter @paperclipai/plugin-sdk exec vitest run` - `pnpm --filter @paperclipai/server exec vitest run plugin-host-services environment-execution-target instrumentation plugin-worker-manager` - `tsc --noEmit` for server, plugin-sdk, and adapter-utils ## Risks - Span data now crosses the worker boundary, so the host allowlist and capability gate must stay strict. - The `traceparent` path must stay valid and host-owned. - Daytona file sync spans must not add new round trips. ## Model Used OpenAI Codex, GPT-5, tool use. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used with version and capability details - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either linked existing issues with `Fixes:` / `Closes:` / `Refs:` or described the issue in the PR body - [x] I have not referenced internal or instance-local Paperclip issues or links - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
42d0ddcb86 |
test(e2e): deflake applications Connections list against the health sweep (#10763)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The applications page shows connected services and their status > - The e2e suite covers the Connections row on that page > - The server runs a periodic connection health sweep during the test > - The sweep can change the connected row label and action after the first render > - This pull request accepts both connected states on that row > - The benefit is the test checks the real user path without a sweep race ## Linked Issues or Issue Description No public issue exists. This pull request fixes a race in the applications Connections e2e test. **Bug:** The test pinned the exact connected-state pill and action. **Expected:** The test should accept both connected states for the same connection row. **Impact:** The health sweep can change the label between assertions. **Fix:** The test now accepts either label and action on the connected row. ## What Changed - Allowed the connected row pill to match `Healthy` or `Needs attention`. - Allowed the connected row action to match `Open` or `Reconnect`. - Kept the not-connected row exact. ## Verification - `git diff --check origin/master..origin/test/deflake-applications-crud-health-sweep` - `git show --stat --summary --oneline 9785785a5d41cd13ee5a0f8aeb73f389cdbdac2e` - Local Playwright e2e did not run in this worktree. - CI on this pull request should provide the full proof. ## Risks - Low risk. The change only widens the expected labels for the connected row. - If the UI adds a new state, the test may need another update. ## Model Used OpenAI GPT-5, tool use, context window not exposed in this shell session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [ ] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [ ] I have updated relevant documentation to reflect my changes - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [ ] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
c09ea7112b |
feat(observability): add granular OpenTelemetry spans for sandbox startup and execution (#10758)
## Thinking Path > - Paperclip coordinates AI agent work and records execution data. > - The sandbox startup path and the host-to-sandbox execution path need clearer OpenTelemetry spans. > - The trace data now shows wait time, critical path data, and bounded labels. > - This pull request adds bounded spans and closed attribute helpers for sandbox startup and execution. > - The result is better trace data with low cardinality and no secret leakage. ## Linked Issues or Issue Description - No public GitHub issue exists for this branch. - Related PR: #10536 - This PR extends the sandbox OpenTelemetry work with exec spans, root timing, and bounded labels. ## What Changed - Added a closed span-attribute contract for sandbox startup data. - Added a bounded label helper for command and region values. - Threaded the active step context into the execution path. - Added a `sandbox.exec` span with true timestamps and bounded attributes. - Added skipped-step and root-span timing data with low-cardinality context. - Moved handshake sub-times and bridge batch data onto spans. ## Verification - `pnpm --filter @paperclipai/adapter-utils run typecheck` - `pnpm --filter @paperclipai/server run typecheck` - `pnpm --filter @paperclipai/adapter-utils exec vitest run` - `pnpm --filter @paperclipai/server exec vitest run environment-execution-target` - `git log --oneline origin/master..origin/feat/sandbox-startup-otel-spans` - `git diff origin/master...origin/feat/sandbox-startup-otel-spans --stat` ## Risks - Span attribute rules could still miss a future field if new code skips the shared helper. - Low-cardinality labels may hide some detail, but that is the intended tradeoff. - Tracing stays fail-open, so a missing tracer still hides data rather than stopping work. ## Model Used - OpenAI Codex, GPT-5, tool use enabled. The runtime did not expose the context window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge The current head still has one failing required check: `e2e`. The PR stays unready for board handoff until that check passes. --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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53bcf3897f |
feat: sync @-mentioned projects into remote sandboxes (confined sandbox transport, flag ON) (#10564)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The run layer must move project context into the sandbox that executes the agent > - Local sandboxes already stage referenced projects for @-mentions > - Remote confined sandboxes dropped the whole referenced set, so the agent lost needed files and paths > - This pull request keeps the confined sandbox transport aligned with the local behavior for referenced projects > - It does this behind a remote-only flag that defaults on, while SSH keeps the old drop-only path > - The benefit is that remote runs can read the same referenced project context that local runs already provide ## Linked Issues or Issue Description **Subsystem affected** Cross-cutting. This change touches server orchestration, sandbox transport, and observability. **Problem or motivation** A run can @-mention another project. Local targets stage each referenced project and give the agent a path. Remote confined sandboxes dropped the full referenced set, so the agent could not read those project files or paths. **Proposed solution** Enable referenced-project sync for the confined sandbox transport behind `PAPERCLIP_MULTI_PROJECT_WORKSPACE_SYNC_REMOTE`, which defaults on. Keep the SSH transport out of scope and keep it dropping referenced projects. Repoint each referenced workspace hint at its staged `project-<projectId>` sandbox directory. Publish `PAPERCLIP_WORKSPACES_JSON` on the confined sandbox lane. Count each per-project remote staging failure as a `staging` failure in the requested-vs-synced metrics. **Alternatives considered** Keep the remote path drop-only. That keeps the gap open. Move the change into SSH too. That expands scope beyond the target transport and adds risk. **Roadmap alignment** No matching item in `ROADMAP.md` showed up in this review. **Additional context** The change lands in three commits. The first commit opens the gate for the confined sandbox transport. The second commit repoints the workspace hints and publishes the workspace map. The third commit records per-project staging failure data. ## What Changed - Opened remote referenced-project sync for the confined sandbox transport behind `PAPERCLIP_MULTI_PROJECT_WORKSPACE_SYNC_REMOTE`. - Repointed referenced workspace hints to the staged `project-<projectId>` sandbox directories and published `PAPERCLIP_WORKSPACES_JSON`. - Counted per-project remote staging failures as first-class `staging` failures in the requested-vs-synced observability. ## Verification - The pushed ref `refs/heads/feat/sync-referenced-projects-remote-sandbox` resolves to the authorized submit SHA. - `git log --oneline origin/master..origin/feat/sync-referenced-projects-remote-sandbox` shows exactly the three expected commits. - The handoff reports server typecheck clean, adapter-utils typecheck clean, and the listed unit tests passing. - The handoff also reports no open review comments and no Greptile score yet. ## Risks - The change touches authorization and sandbox path handling, so regressions could block remote runs or expose the wrong project context. - The new flag defaults on, so any bug in the remote path affects normal remote use. - SSH stays out of scope, so the two transport paths must remain distinct. ## Model Used OpenAI GPT-5 via Codex. Tool use enabled. Context window not reported in this run. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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b01f423cd7 |
fix(server): export manual OpenTelemetry spans (#10565)
## Thinking Path > - Paperclip uses the server to coordinate agent work. > - The server emits manual OpenTelemetry spans for startup, heartbeat, and sandbox execution. > - Those spans need the shared OpenTelemetry API package and a type-safe exporter path. > - Without the direct API dependency, the tracer stays no-op and the spans do not reach the collector. > - This pull request adds the direct dependency and the exporter cast. > - The benefit is that the manual spans can export cleanly at runtime. ## Linked Issues or Issue Description **What happened?** The server resolved the tracer with a runtime import, but `server` did not declare `@opentelemetry/api`. The manual spans stayed no-op, so the collector did not receive them. **Expected behavior** The server should load the shared OpenTelemetry API package, create the manual spans, and export them. **Steps to reproduce** 1. Start the server with telemetry enabled. 2. Run startup, heartbeat, or sandbox execution paths. 3. Observe that the manual spans do not export before this change. **Paperclip version or commit** `f91df236dfd8e5e6210941c80efeb0a7953bbe50` **Deployment mode** Built from source with `pnpm dev` or `pnpm build`. ## What Changed - Added `@opentelemetry/api` as a direct `server` dependency. - Cast the `traceExporter` value to `never` so the type check passes without a static `SpanExporter` import. - Kept the optional OTLP and SDK packages behind dynamic import. ## Verification - `pnpm build` in `server/` passed. - `server/src/instrumentation.ts` does not import `SpanExporter`. - `server/package.json` lists `@opentelemetry/api` at `^1.9.0`. ## Risks - Low risk. The change touches dependency metadata and one type cast. - Runtime telemetry still needs live collector QA. ## Model Used - OpenAI Codex, GPT-5, tool use enabled. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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c4f62644b0 |
docs(daytona): document operator enablement for the advisory bwrap wrapper (#10560)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The Daytona sandbox provider now uses an advisory bwrap wrapper > - Operators need clear host and image setup for bubblewrap, sudo, and user namespaces > - The repo should document that setup, but it should not own provisioning > - This pull request adds the operator guidance to the shared sandbox requirements and the Daytona README > - The benefit is that operators can enable the wrapper with the same steps the code expects ## Linked Issues or Issue Description Refs #10554 and #10541. ## What Changed - Added an advisory bwrap prerequisites section to `packages/plugins/sandbox-providers/SANDBOX-REQUIREMENTS.md`. - Added an operator enablement section to `packages/plugins/sandbox-providers/daytona/README.md`. - Documented the install commands, the sudoers rule, the user namespace setting, and the verification command. - Kept provisioning out of the repo and left it to the image or snapshot layer. ## Verification - `git diff --check origin/master...HEAD` - `gh pr checks 10560` ## Risks - Low risk. This change updates documentation only. - The docs can drift if the host setup changes later. - Provisioning still lives outside the repo. ## Model Used - OpenAI Codex, GPT-5, tool use enabled. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used with version and capability details - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either linked existing issues with `Fixes: #` / `Closes: #` / `Refs #` OR described the issue in-PR following the relevant issue template - [x] I have not referenced internal or instance-local Paperclip issues or links - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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131d476a7e |
fix(ci): make PR-template inline-description contract explicit (#10558)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Contributors use the PR template to describe changes before review > - The linked-issue gate reads literal template labels, not freeform prose > - The template did not state that rule, so a good prose summary could fail on first submission > - The gate also skipped two issue template paths that the PR template already points to > - This pull request makes the template and the gate match the same contract > - The benefit is that a good-faith author can pass the check on the first try ## Linked Issues or Issue Description No public issue exists. Related public PR: #7762. The problem is a mismatch between the PR template and the linked-issue gate. The template gave a bare placeholder and did not explain the literal-label rule. The gate also missed the enhancement and docs issue templates. ## What Changed - Replaced the bare PR-template placeholder with labeled inline skeletons for bug, feature, and adapter paths. - Added one sentence that says the gate reads literal labels on separate lines. - Added the enhancement and docs issue template field sets to the linked-issue gate. - Added and updated tests for prose-only bodies, template skeleton bodies, and extra issue template coverage. ## Verification - `node --test .github/scripts/tests/check-pr-linked-issue.test.mjs` - The branch contains one commit: `561f1ed3a1434ed4562306f74d40968163ef1444` ## Risks Low risk. The three-field minimum stays in place. The main change is clearer author guidance in the PR template. ## Model Used OpenAI Codex, GPT-5, tool use. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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8c910b9a40 |
feat(daytona): activate the advisory bwrap wrapper at the execute seam (#10554)
## Thinking Path > - Paperclip is the control plane for autonomous AI companies > - Daytona runs code in a remote sandbox > - The execute seam decides how agent commands run > - The pure bwrap builder and the capability probes already merged in #10541 > - This pull request activates the advisory bwrap wrapper at the execute seam > - The wrapper uses bwrap when the lease has the needed data and keeps plain execution when wrap is not safe > - The benefit is safer isolation without changing the current runtime contract ## Linked Issues or Issue Description - No public GitHub issue exists for this work. - Related PR: #10541 Problem: The Daytona execute seam can run commands without the advisory bwrap wrapper when the lease does not yet provide the wrapper data. Proposed solution: Activate the advisory bwrap wrapper when the lease reports bwrap support and a known uid or gid. Keep plain execution when wrap is not safe. Alternatives: - Always wrap every command. This can break current behavior and can create root-owned files when the uid or gid is missing. - Reject execution when bwrap is missing. This can fail a lease for a best-effort wrapper and would change the current runtime contract. Roadmap alignment: This work fits the Cloud / Sandbox agents roadmap area. ## What Changed - `executeOneShot` now accepts a bwrap execution plan. - `onEnvironmentExecute` now reads the lease bwrap flags and the writable sync paths. - A helper resolves when the seam should wrap the command. - The writable set now includes the workspace path and the collected read-write sync destinations. - The wrapper re-binds stdin after the fresh `/tmp` mount. - The README explains the advisory wrapper behavior and the writable set model. ## Verification - `pnpm --filter @paperclipai/plugin-daytona exec vitest run plugin.test.ts` - `pnpm --filter @paperclipai/plugin-daytona exec tsc --noEmit` ## Risks - A missing bwrap tool, a missing `sudo -n` rule, or a blocked user namespace keeps plain execution. - The change shifts the execute seam, so command setup needs careful review. - The wrapper is advisory, so it does not add a security boundary by itself. ## Model Used - OpenAI Codex, GPT-5, tool use, code execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used with version and capability details - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either linked existing issues or described the issue in this PR - [x] I have not referenced internal or instance-local Paperclip issues or links - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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70816c18e5 |
feat(daytona): add advisory bwrap command builder and capability probes (#10541)
## Thinking Path > - Paperclip helps people manage AI agents for work > - The Daytona sandbox provider needs a clear advisory wrapper path and best-effort capability checks > - The wrapper must not change the security model or block a lease when the host lacks bubblewrap support > - The lease metadata must carry the capability result so later steps can make a stable choice > - This pull request adds a pure command builder for the advisory wrapper > - This pull request adds non-throwing probes for bubblewrap and sandbox uid or gid data > - The benefit is a safer advisory path with no behavior change in the execution seam ## Linked Issues or Issue Description ### Problem or motivation The Daytona sandbox provider needs a clear advisory wrapper path and best-effort capability checks. The provider must not fail a lease when the host lacks bubblewrap support. The wrapper must stay advisory only. It must not change the security model. ### Proposed solution Add a pure command builder for the advisory wrapper and non-throwing probes for bubblewrap and sandbox uid or gid data. Store the probe result on the lease metadata so later steps can make a stable choice. Keep the execution seam unchanged. ### Alternatives considered Do nothing and keep the current execution seam unchanged. That path gives no signal when a file change is not durable. This pull request adds the signal without changing runtime behavior. ### Roadmap alignment This work fits the Daytona sandbox provider path and keeps the advisory wrapper outside the execution seam. It does not change the current security model. ### Additional context The wrapper is advisory only. It adds no security. The read-only root is a feedback signal. ## What Changed - Added `buildBwrapCommand` as a pure string builder for the advisory wrapper command. - Added `detectBwrapAvailable` and `detectSandboxUidGid` as best-effort probes that never throw. - Stored `bwrapAvailable`, `sandboxUid`, and `sandboxGid` on the lease metadata in the acquire, resume, and probe hooks. - Added a README section that describes the advisory wrapper model. - Kept the execution seam unchanged. ## Verification - `vitest run` for `packages/plugins/sandbox-providers/daytona/src/plugin.test.ts` - The run passed all 106 tests, including the new builder and probe coverage. - The standalone `tsc` run showed only the known baseline noise that already exists on `master`. ## Risks - Risk is low because the execution seam does not change. - The new wrapper stays advisory and does not alter the sandbox security model. - The probe results only add metadata and do not fail the lease on missing host support. ## Model Used OpenAI Codex, GPT-5, tool use. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used with version and capability details - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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4813ed3f0c |
fix(db): harden embedded Postgres test start with bounded retry (#10540)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The database layer uses embedded Postgres for isolated test runs > - A port probe can fail when another process takes the same port before Postgres binds it > - That race can make a test fail even when the code under test is fine > - This pull request adds bounded retry and clearer error text to the embedded Postgres start path > - The benefit is more stable tests and faster diagnosis when startup still fails ## Linked Issues or Issue Description No public GitHub issue exists for this change. This PR fixes a flaky embedded Postgres test start path. The helper can lose a port between probe and bind. This PR retries the start with a fresh port and a fresh data directory. Related public context: - Refs #7259 - Refs #9769 ## What Changed - Add bounded retry around embedded Postgres initialization and start. - Stop each failed attempt and remove its data directory before the next attempt. - Capture Postgres output in the thrown error so the failure is easier to read. - Add unit coverage for retry success, retry exhaustion, and the improved error text. ## Verification - `pnpm --filter @paperclipai/db exec vitest run src/test-embedded-postgres.test.ts src/embedded-postgres-error.test.ts` - `pnpm --filter @paperclipai/db exec vitest run` - `pnpm --filter @paperclipai/db exec vitest run` passed in the worktree after the change. - `worktree.test.ts > quarantines copied live execution state in seeded worktree databases` passed. - A real cluster loop of 100 starts passed with 0 failures. ## Risks - The retry can hide a real startup fault until the fifth try. - The bound keeps the wait short, and the final error still shows the captured Postgres log. - This change only affects the embedded Postgres test start helper. ## Model Used OpenAI Codex, GPT-5, tool-use enabled. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
9f7565f4ce |
feat: activate OpenTelemetry spans on the sandbox start path (#10536)
## Thinking Path > - Paperclip moves agent work through sandboxed execution and control-plane services. > - The sandbox start path now has a no-op span seam. > - This change turns that seam on when OTLP export is configured. > - It keeps the default path unchanged when export is off. > - The result is structured startup traces with low-cardinality attributes and explicit parent links. > - The benefit is better observability without changing normal behavior. ## Linked Issues or Issue Description No public GitHub issue exists for this change. ### Problem The sandbox start path has a tracer seam, but it stays a no-op unless the OTLP export path is active. ### Proposed solution Enable the server tracer on sandbox bring-up, open a root span, parent each startup boundary to that root, and keep the export path opt-in behind `OTEL_EXPORTER_OTLP_ENDPOINT`. ### Alternatives considered - Keep the start path as a no-op. I rejected that path because it leaves sandbox start opaque when OTLP export is already configured. - Add broad attributes for commands and paths. I rejected that path because the span allowlist must stay low-cardinality. ### Roadmap alignment This follows the current OTel sandbox-start work and keeps the default path unchanged. ## What Changed - Add a root sandbox startup span and child spans for each named startup boundary. - Keep concurrent bridge spans parented to the root span. - Inject the server tracer through the adapter deps without OpenTelemetry imports in the engine. - Attach host-received provider duration attributes only when the values are finite. - Keep span attributes inside the allowlist and keep command, path, id, and error text out of span data. ## Verification - The pushed branch already passed `pnpm --filter @paperclipai/adapter-utils exec tsc --noEmit`. - The pushed branch already passed `pnpm exec vitest run packages/adapter-utils/src/acpx-engine/`. - The pushed branch already passed `pnpm --filter @paperclipai/server exec vitest run src/__tests__/environment-execution-target.test.ts src/__tests__/instrumentation.test.ts`. - The pushed branch already passed `pnpm --filter @paperclipai/server exec tsc --noEmit`. ## Risks - OTel export changes trace volume when the endpoint is set. - The allowlist limits trace detail, so new fields need care. - The change stays no-op when OTLP export is off. ## Model Used - OpenAI GPT-5, tool use enabled. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used with capability details - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either linked existing issues or described the issue in-PR - [x] I have not referenced internal/instance-local Paperclip issues or links - [x] My branch name describes the change and contains no internal ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
5cffd5c72e |
feat(sandbox): declare and collect the advisory read-write intent (#10521)
## Thinking Path > - Paperclip is the control plane for AI agent companies > - Sandbox providers move files between the host and the sandbox > - The runtime needs advisory data for which sync paths are writable > - The host already knows that intent when it prepares the sync map > - Daytona can record that intent for later use > - This pull request adds the advisory access field and collects writable paths > - The benefit is that later runtime work can use the data without changing current flow ## Linked Issues or Issue Description No public GitHub issue exists for this change. The description below follows the feature-request template fields. ### Problem or motivation An agent runs inside an ephemeral sandbox. Some sandbox paths keep agent changes; other paths do not. Today the runtime has no declared signal for which sync destinations the agent may change and keep. A later feedback wrapper needs this signal to give the agent real-time feedback when a write lands on a non-persistent path. ### Proposed solution Add an optional advisory `access: "rw" | "ro"` field to the sync file-mapping types. The host sets `rw` for the workspace, git-history, and asset destinations, and `ro` for referenced-project trees. An absent value defaults to `ro`. The Daytona provider collects the `rw` target directories into a per-lease writable set for later use. This change adds the metadata and the collection only. No execution path reads the writable set yet, so runtime behavior does not change. ### Alternatives considered Derive a static writable set in provider code. This alternative is weaker: the layer that authors each sync destination already knows the intent, so a per-operation declaration is more accurate and does not hard-code a path list. ### Roadmap alignment This is the first step toward an advisory sandbox feedback wrapper. The wrapper is best-effort and adds no security. The ephemeral sandbox stays the only boundary. ### Additional context The field is advisory metadata. It does not change the file transfer and adds no security. ## What Changed - Added an optional `access` field to the sync file mapping types. - Set the workspace, git history, and asset destinations to writable. - Set referenced project destinations to read only. - Added a writable set store in the Daytona provider. - Recorded the parent directory of each writable sync mapping during sync in. ## Verification - The handoff reports these checks before push. - `pnpm --filter @paperclipai/adapter-utils exec vitest run sandbox-managed-runtime.test.ts` - `pnpm --filter @paperclipai/plugin-sdk exec tsc --noEmit` - `vitest run src/plugin.test.ts` in the Daytona package - `tsc --noEmit` in the Daytona package ## Risks - Low risk. - The new field is advisory. - The writable set store is best effort and in memory. - A cold store falls back to the workspace baseline. ## Model Used OpenAI Codex, GPT-5, tool use, code execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used with version and capability details - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either linked existing issues or described the issue in the PR - [x] I have not referenced internal or instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [ ] I have run tests locally and they pass - [ ] I have added or updated tests where applicable - [ ] I have updated relevant documentation to reflect my changes - [ ] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [ ] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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740554acc6 |
feat: add a no-op OpenTelemetry span seam for the sandbox startup path (#10522)
## Thinking Path > - Paperclip helps people run and govern AI agent work > - Sandbox startup needs a safe place to add telemetry spans without forcing OpenTelemetry on every run > - This change adds a no-op span seam, so the startup path can accept a tracer later and still stay inert now > - The server gets a lazy tracer accessor, and the adapter timing helper gets an injected tracer hook > - The change keeps the default path free of OpenTelemetry and keeps the existing startup event path unchanged > - The benefit is a future-safe seam with no runtime change today ## Linked Issues or Issue Description This PR addresses a feature gap in the sandbox startup path. ### Problem Sandbox startup has no safe span seam. A direct OpenTelemetry import would load telemetry packages on every run. ### Proposed Solution Add a lazy tracer accessor in the server. Add an injected no-op tracer seam in startup timing. ### Alternatives Import OpenTelemetry directly in the startup path. Reject that path because the default startup flow must stay inert. ## What Changed - Added a lazy startup tracer accessor in `server/src/instrumentation.ts`. - Added an injected startup tracer seam in `packages/adapter-utils/src/acpx-engine/startup-timing.ts`. - Kept the startup event path unchanged. - Kept `adapter-utils` free of OpenTelemetry imports. ## Verification - `pnpm exec vitest run packages/adapter-utils/src/acpx-engine/startup-timing.test.ts` - `pnpm exec vitest run server/src/__tests__/instrumentation.test.ts` - `tsc --noEmit` for `@paperclipai/adapter-utils` and `@paperclipai/server` ## Risks Low risk. The default tracer is a no-op, so the runtime path stays inert until a later change injects a real tracer. ## Model Used OpenAI GPT-5. Tool use and code execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used with version and capability details - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and found none - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal or instance-local Paperclip issues or links - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [ ] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [ ] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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d5b9f6c8c9 |
perf(sandbox): coalesce git-workspace stage-sync into one confined syncIn (#10488)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Cloud and sandbox agents need less round-trip overhead at workspace start > - The workspace start path now uploads the git history and the working tree overlay in two separate sync operations > - That adds extra mkdir, guard, upload, and rename work for the same workspace bytes > - This pull request merges those two uploads into one guarded sync operation > - The benefit is one sync round trip for the workspace bytes with the same guard and login-shell contract ## Linked Issues or Issue Description No public GitHub issue exists for this change. ### Problem A git-backed workspace start uploads the git-history clone and the working-tree overlay as two separate host-to-sandbox sync operations. ### Proposed Solution Merge the two uploads into one sync operation. Keep both tar mappings under the same confinement guard. Run the git-history extract first, then the overlay extract, then optional cleanup. ### Alternatives Considered Keep two sync operations. That keeps the current round-trip cost and duplicates the guard, upload, and rename work. ### Roadmap Alignment This change supports the roadmap work on cloud and sandbox agents by reducing workspace start overhead. ## What Changed - Merge the git-history tar and the working-tree overlay tar into one sync operation. - Run the git-history extract first, then the overlay extract, then optional remove-deleted-paths cleanup. - Keep both temporary tar targets under the runtime directory so the first extract cannot delete the second tar before use. - Keep the symlink-escape guard, login-shell contract, and file-mapping checks on the merged file set. ## Verification - `tsc --noEmit` on `@paperclipai/adapter-utils` - `@paperclipai/adapter-utils` full project test suite: 354 pass / 4 skipped - Orchestrator proof: one merged operation with both tars and two ordered extract commands - Orchestrator proof: the confinement guard covers both tar mappings - Daytona plugin `plugin.test.ts`: 94 pass ## Risks - Any regression in the extract order could change workspace start behavior. - Any regression in the merged guard could block valid uploads or miss an escape attempt. ## Model Used OpenAI GPT-5, tool use enabled, current Codex session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
674d71548a |
perf(sandbox): fold dead sandbox start round trips (bridge dirs + handle-cache seed) (#10485)
## Thinking Path > - Paperclip is the control plane for AI agents. > - Sandbox startup uses bridge directories and a Daytona workspace handle. > - The cold path made repeat directory creation calls and one avoidable handle fetch. > - Those calls add delay but do not change state. > - This pull request folds the bridge directory setup into one exec, removes redundant process-session setup, and seeds the Daytona handle cache at acquire. > - The benefit is fewer deterministic host-to-sandbox round trips and faster cold starts. ## Linked Issues or Issue Description - Problem: Cold sandbox start does extra directory creation work and re-fetches a handle it already has. - Expected result: The startup path should create each directory once and reuse the fresh handle. - Related PRs I found on GitHub: #9280, #9293. ## What Changed - Added `makeDirs` to the bridge queue client and used one `mkdir -p` exec for the callback bridge directories. - Removed the two upfront `mkdir` execs for the process-session bridge stdin and events directories. - Seeded the Daytona sandbox handle cache at acquire so realize can reuse the fresh handle. - Reset the process-scoped cache in the compatibility test so the second sync run sees the expected exec count. ## Verification - `pnpm --filter @paperclipai/adapter-utils exec vitest run` - 351 passed, 4 skipped. - `pnpm --filter @paperclipai/sandbox-provider-daytona exec vitest run` - 91 passed. - `pnpm --filter @paperclipai/adapter-utils exec tsc --noEmit` - clean. - I checked `ROADMAP.md` for sandbox round-trip work. I found no duplicate planned core work for this change. ## Risks - Low risk. The change removes redundant calls and adds cache seeding. - A wrong cache scope would hide the handle. The seed now checks the lease scope and fails loudly. - The daytona package `tsc --noEmit` still depends on SDK types that are not installed in this isolated workspace. CI covers that path. ## Model Used - OpenAI GPT-5, tool-using, with code execution in the current workspace. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used with capability details - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either linked public issues or described the issue in-PR - [x] I have not referenced internal or instance-local Paperclip issues or links - [x] My branch name describes the change and contains no internal ticket id - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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a93a74f91a |
feat(server): surface referenced-project sync warnings and enable multi-project sync by default (#10473)
## Thinking Path > - Paperclip helps people manage AI agent work for a company > - Workspace sync must keep one primary path and any referenced project paths in step > - A partial sync must not fail in silence > - Operators also need a clear signal when the feature uses the new default path > - This pull request surfaces referenced-project warnings on the run and turns the feature flag default on > - The benefit is better visibility and a live multi-project sync path by default ## Linked Issues or Issue Description This pull request completes the multi-project workspace sync go-live work. Related pull requests: - Refs: #10380 - Refs: #10448 - Refs: #10469 ## What Changed - Surface referenced-project warnings on the run when a project drops during authorization or resolution. - Record a structured failure reason for each dropped referenced project. - Emit one structured log line at run preparation with the requested count, the synced count, and the failure reasons. - Flip the workspace sync kill-switch default to on when the env value is unset. - Keep the primary workspace path unchanged. ## Verification - `tsc --noEmit` passed in the server package. - `heartbeat-referenced-projects.test.ts` and `heartbeat-project-env.test.ts` passed. - `workspace-runtime.test.ts` passed. - `adapter-utils` runtime tests passed for sandbox, command, remote, and file sync paths. ## Risks - The new default can expose the feature to more runs if an operator does not set the env override. - The new surfaced warnings can change operator visible run output. - The structured log line can add noise if a run has many referenced project failures. ## Model Used - OpenAI Codex, GPT-5, tool use, large context window. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used with version and capability details - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either linked existing issues with `Fixes: #` / `Closes #` / `Refs #` or described the issue in-PR following the relevant issue template - [x] I have not referenced internal or instance-local Paperclip issues or links - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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6a267e0328 |
feat(sandbox): stage referenced projects into the run sandbox (#10469)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Runs can reference more than one project > - Each referenced project must land in its own sandbox tree so one run does not mix files across projects > - The anchor workspace must keep its own git history and overlay rules > - Fail closed on sync and confinement errors, and keep the other projects alive > - This pull request stages referenced projects into isolated project directories under the run sandbox root > - The benefit is safer multi-project runs with clear failure isolation ## Linked Issues or Issue Description No public issue exists. Related PR: #10448. ## What Changed - Thread additional referenced-project sources through the run prepare path and the runtime layers. - Stage each referenced project into its own `project-<projectId>` directory under the runtime root. - Keep the anchor workspace history and overlay semantics unchanged. - Fail closed on confinement or sync errors for one project, and keep the other projects running. - Keep the path inert by default behind the multi-project workspace-sync kill-switch. - No documentation update was needed for this code-only runtime change. ## Verification - `pnpm --filter @paperclipai/adapter-utils exec vitest run src/sandbox-file-sync.test.ts src/command-managed-runtime.test.ts src/sandbox-managed-runtime.test.ts src/remote-managed-runtime.test.ts` - `pnpm --filter @paperclipai/adapter-utils exec tsc --noEmit` - The branch points at `871378e4064a95adc8e4647e442ec1359768de61` on `origin/feat/stage-referenced-projects-into-sandbox`. - GitHub CI is green on PR #10469. ## Risks - A referenced project can skip if confinement or sync fails. - A new runtime tree layout can affect tools that assume one project root. - The kill-switch keeps the path inert until operators enable it. ## Model Used OpenAI Codex, GPT-5, tool use enabled. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes or confirmed no docs update was needed - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
15ce70dc18 |
feat(server): thread plural referenced-project workspaces through run prep (#10448)
## Thinking Path > - Paperclip coordinates work for autonomous companies. > - A run needs a workspace view before execution starts. > - That view now needs to cover one anchor project and more referenced projects. > - Those extra workspaces must stay separate and must not change the anchor path when the feature stays off. > - This PR threads plural workspace data through run prep behind a default-off kill switch. > - It also keeps extra project workspaces isolated and makes the realization contract round-trip the new shape. > - The benefit is safer run prep for referenced projects without changing the current default path. ## Linked Issues or Issue Description This PR does not link a public GitHub issue. It follows the internal run-prep task for plural referenced-project workspaces. Problem: - Run prep resolves the anchor project today, but it does not yet carry each referenced project into the run workspace view. - That gap blocks runs that need a second repo or sibling project during preparation. Proposed solution: - Thread a plural workspace result through run prep. - Keep the anchor path unchanged when the kill switch is off. - Resolve each referenced project into its own managed checkout directory when the flag is on. Alternatives considered: - Keep one shared workspace and layer the extra repos into it. Rejected because it would blur isolation and make failures harder to bound. - Upload the extra workspaces immediately. Rejected because this PR only prepares the data path. Roadmap alignment: - This change sits in the workspace and sandbox path. - It matches the roadmap work on workspace strategy and cloud or sandbox agents. ## What Changed - Added `additionalWorkspaces[]` to the run workspace result. - Split workspace resolution into an anchor path and an optional referenced-project path behind `PAPERCLIP_MULTI_PROJECT_WORKSPACE_SYNC`. - Kept per-project failure isolation so one bad clone does not stop the run. - Keyed managed workspace directories by `projectId` so sibling workspaces stay separate. - Added `additionalSources[]` to the workspace realization request and kept read and write paths backward compatible. - Added tests for the anchor-only path, the new workspace shape, and the per-project directory rule. ## Verification - `pnpm --filter @paperclipai/server run typecheck` - `pnpm --filter @paperclipai/shared run typecheck` - `pnpm --filter @paperclipai/server exec vitest run src/__tests__/heartbeat-project-env.test.ts` 21/21 - `pnpm --filter @paperclipai/server exec vitest run src/__tests__/workspace-runtime.test.ts` 98/98 ## Risks Low risk. The new path stays behind a default-off kill switch, so the anchor flow does not change when the flag is off. The main risk is a bad referenced project clone. That case now drops only the affected project and keeps the run alive. The shared type change also needs every consumer to use the new array field where extra workspaces matter. ## Model Used OpenAI Codex (GPT-5; exact internal model ID not exposed in this environment; tool use enabled) ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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d51f42ed64 |
test(server): drain heartbeat runs to quiescence in sibling suite teardown (#10464)
## Thinking Path > - Paperclip uses heartbeats to run work. > - Test suites share heartbeat run state during teardown. > - Late heartbeat work can race shared table deletes. > - That race can deadlock or fail foreign key checks. > - The primary suite already uses a drain helper to wait for quiescence. > - This pull request reuses that helper in the sibling suites that share the race. > - The benefit is stable teardown and fewer flake failures. ## Linked Issues or Issue Description No public GitHub issue exists for this change. Refs: #10450 This pull request reuses the quiescence drain from the primary suite. ## What Changed - Added `server/src/__tests__/helpers/drain-heartbeat-runs.ts`. - Reused the shared helper in `low-trust-red-team-routes.test.ts`. - Applied the drain to the eight sibling suites that share the race. - Kept the existing test intent unchanged. ## Verification - `git log --oneline origin/master..origin/test/heartbeat-teardown-quiescence-drain-sweep` - `git diff --stat origin/master...origin/test/heartbeat-teardown-quiescence-drain-sweep` - Existing local test evidence in the handoff shows the primary suite and the guarded suites pass. - The handoff also records a stress loop with no `40P01` or `23503` errors. ## Risks - Low risk. The change touches test teardown only. - The helper waits for active runs to drain. A new real background execution path may need the same guard. ## Model Used OpenAI GPT-5, tool-use and code execution enabled. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used with version and capability details - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either linked existing issues with `Fixes: #` / `Closes #` / `Refs #` or described the issue in-PR following the relevant issue template - [x] I have not referenced internal or instance-local Paperclip issues or links - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes, or no docs update was required for this test-only change - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
7083c275c8 |
refactor(sandbox): retire the dead noProfile flag from the exec path (#10461)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The sandbox exec path starts agent commands and passes runtime options to the server and plugin layers > - This path kept a noProfile flag after the exec wrappers stopped sourcing a login profile > - The flag no longer changed behavior, so it left dead API surface in the protocol and runtime helpers > - This pull request removes that dead flag from the plugin protocol, the server drivers, and the managed-runtime helpers > - It also updates the tests and points the agent runtime README at the sandbox requirements file > - The benefit is a smaller and clearer exec-path contract with no behavior change ## Linked Issues or Issue Description - No public GitHub issue exists. ### What happened? The sandbox exec path kept a `noProfile` field after the exec wrappers stopped sourcing a login profile. ### Expected behavior The plugin protocol, server drivers, and managed-runtime helpers should not expose or forward a dead field. ### Steps to reproduce 1. Run a managed-runtime command through the sandbox exec path. 2. Inspect the protocol payload and runtime helper inputs. 3. Observe that `noProfile` is present even though it no longer changes behavior. ### Paperclip version or commit `60c7da86fc7a6c1dbf37bbcd86e25ecaaff01607` ### Deployment mode Built from source (pnpm dev / pnpm build) ### Additional context This pull request removes the dead field, updates the affected tests, and updates the README note for the sandbox profile path. ## What Changed - Removed noProfile from the plugin protocol and the server exec-path call sites. - Updated the managed-runtime helpers to use the narrower exec-path contract. - Updated the affected tests and added the README pointer to SANDBOX-REQUIREMENTS.md. ## Verification - `git grep -n "noProfile" -- packages/ server/` returns zero matches. - `tsc --noEmit` passed for `@paperclipai/adapter-utils`, `@paperclipai/plugin-sdk`, and `@paperclipai/server`. - `command-managed-runtime.test.ts` passed: 22/22. - `environment-runtime.test.ts` passed: 24/24. ## Risks - Low risk. The flag was already a no-op. - A hidden external caller may still send the removed field. ## Model Used - OpenAI GPT-5, tool-enabled. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
d6e235cbcf |
perf(sandbox-providers): drop nvm sourcing from exec wrappers (#10443)
## Thinking Path > - Paperclip keeps agent work on a controlled execution plane. > - Sandbox exec wrappers run on the hot path for agent commands. > - The current change removes the explicit `nvm.sh` load step from those wrappers. > - The sandbox image already restores PATH through profile startup. > - This pull request keeps profile sourcing where the wrapper still needs it and drops only the `nvm.sh` load step. > - The result is a smaller command path with the same node and agent CLI resolution. ## Linked Issues or Issue Description No public GitHub issue exists for this change. Problem: The sandbox exec wrappers spent extra time sourcing `nvm.sh` before each command. The sandbox image already restores PATH in `/etc/profile.d/00-restore-env.sh`, so that explicit `nvm.sh` work was redundant. Proposed solution: Remove the `nvm.sh` source step from all six wrappers. Keep the profile sourcing that the provider still needs for PATH setup. Alternatives considered: Keep the existing shell setup and accept the launch cost. That keeps the current behavior, but it leaves the hot path slower than needed. Roadmap alignment: This change keeps the sandbox command path small and predictable. It does not change the adapter contract or the node resolution rules. ## What Changed - Removed `nvm.sh` sourcing from all six sandbox exec wrappers. - Kept profile sourcing where the provider still needs it for PATH setup. - Switched Modal to a non-login shell because the script now sources profiles itself. - Updated wrapper tests to assert that built commands do not source `nvm.sh`. ## Verification - Local TypeScript typecheck passed in each changed package. - Focused provider tests passed for Daytona, E2B, Modal, exe-dev, Cloudflare bridge, and adapter-utils. - One Daytona test failure is pre-existing and unrelated to this change. ## Risks - This change alters shell startup for sandbox exec paths. - A provider that depends on implicit shell setup may need a follow-up. - The current tests cover command shape, but they do not cover every runtime shell path. ## Model Used OpenAI Codex, GPT-5, tool use. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used with version and capability details - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal or instance-local Paperclip issues or links - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
9574cad3e8 |
test(server): drain heartbeat runs to quiescence before low-trust teardown (#10450)
## Thinking Path > - Paperclip manages AI work through tasks, comments, and heartbeats > - A heartbeat wake can register after a test body ends > - The low-trust red-team route suite tears down data while that wake can still run > - Teardown can then lock `issues` and `heartbeat_runs` in opposite order and deadlock > - This pull request adds a drain that waits for heartbeat runs to reach quiescence before teardown > - The benefit is stable test teardown without removing coverage ## Linked Issues or Issue Description The serialized low-trust red-team route suite can deadlock in `afterEach` teardown. A heartbeat wake can register after the test body ends. Teardown can then delete `heartbeat_runs` while the wake still writes issue tables. This change waits until no run is queued or running before any delete. ## What Changed - Added `drainHeartbeatRunsToQuiescence` for test teardown. - Called the drain first in the low-trust red-team route suite `afterEach` path. - Kept the change test-teardown only. ## Verification - The author handoff reports `tsc -p server/tsconfig.json --noEmit` as clean. - The author handoff reports 60 of 60 stress-loop runs with zero deadlocks. - `pnpm --filter @paperclipai/server typecheck` could not run here because this workspace lacks `node_modules/typescript/bin/tsc`. ## Risks - Low risk. - The change only affects test teardown. - If a wake never reaches registration, the drain can wait longer than expected. - The loop re-checks the run table until no run is queued or running. ## Model Used OpenAI GPT-5, tool-use, 256k context. ## Checklist - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
0edb742f8d |
test(server): relocate referenced-project run-prep tests to a dedicated file (#10446)
## Thinking Path > - Paperclip keeps server tests that protect run-prep and issue service behavior > - The issue service test file now mixes issue service tests with heartbeat run-prep tests > - That mix makes the file harder to scan and harder to keep focused > - The run-prep suites belong with the other heartbeat tests > - This pull request moves those suites into `heartbeat-referenced-projects.test.ts` > - The benefit is a smaller issue service test file and a clearer home for heartbeat tests ## Linked Issues or Issue Description This PR has no public GitHub issue. It moves the referenced-project run-prep suites into a dedicated heartbeat test file. The issue service test file keeps only issue service tests. ## What Changed - Moved the `resolveRunReferencedProjects` suite into `server/src/__tests__/heartbeat-referenced-projects.test.ts` - Moved the multi-project workspace sync kill-switch test into the same file - Left `server/src/__tests__/issues-service.test.ts` with issue service coverage only ## Verification - `pnpm exec tsc --noEmit` - `pnpm exec vitest run src/__tests__/heartbeat-referenced-projects.test.ts` - `pnpm exec vitest run src/__tests__/issues-service.test.ts` - `git log --oneline origin/master..HEAD` shows one commit - `git diff --stat origin/master...HEAD` shows only the two test files ## Risks - Low risk. This change moves tests only and does not change product code. ## Model Used OpenAI Codex, GPT-5, tool use enabled, local shell execution enabled. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [ ] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
11273c18d6 |
feat(server): resolve per-project-authorized referenced-project set for run prep (#10380)
## Thinking Path > - Paperclip is the control plane for autonomous AI companies > - Run prep needs to know which referenced projects belong in a run without breaking company boundaries > - The anchor project must keep its existing authorization path, while additional mentioned projects must be checked independently and fail closed if access is denied or unknown > - This pull request adds a helper that computes the deduped, company-scoped referenced-project set for run prep and warns when a project is rejected > - It also introduces an off-by-default kill-switch so downstream consumers can adopt the set safely > - The benefit is safer multi-project run preparation without widening access beyond what the run actor is already allowed to read ## Linked Issues or Issue Description This PR does not rely on a public GitHub issue. The change is self-contained and follows the feature-request style description below so reviewers can evaluate it without leaving the PR. **Problem / motivation** - Run prep needs to assemble a referenced-project set that includes the anchor project plus additional @-mentioned projects. - Additional projects must be authorized independently and rejected projects must not widen access. - The result should be safe to merge inertly behind a default-off kill-switch until downstream consumers opt in. **Proposed solution** - Add `resolveRunReferencedProjects(issueId, anchorProjectId, opts)` in `server/src/services/heartbeat.ts`. - Compute a deduped company-scoped set with the anchor project first and additional mentions admitted only after a fail-closed `project:read` authorization check. - Drop missing, foreign-company, denied, or errored projects and append run warnings when they are rejected. - Keep the feature inert behind a default-off kill-switch until downstream workspace resolution is wired to consume it. **Alternatives considered** - Reusing company membership alone was rejected because it would over-admit projects and widen access. - Including all mentioned projects without per-project authorization was rejected because it would bypass the existing access model. **Roadmap alignment** - This is Phase 1 only: the helper is computed but not yet consumed downstream, so the merge is inert until a later phase turns the flag on. ## What Changed - Added `resolveRunReferencedProjects(issueId, anchorProjectId, opts)` in `server/src/services/heartbeat.ts`. - Enforced company scoping, deduplication, fail-closed authorization, and warning emission for additional referenced projects. - Added a configurable cap for the additional referenced-project set. - Added tests covering allowed, denied, foreign-company, thrown-auth, dedupe, and overflow cases. - Added a default-off kill-switch for downstream consumption of the computed set. ## Verification - `tsc --noEmit` - `server/src/__tests__/issues-service.test.ts` now passes 117/117 - `git log --oneline origin/master..HEAD` shows only the expected single commit on this branch ## Risks - The new helper is computed but not yet consumed by workspace resolution, so behavior only changes once downstream code is wired to it. - The authorization path for additional referenced projects is stricter than before, so any unexpected access gap will surface as a dropped project plus warning. ## Model Used OpenAI Codex, GPT-5, tool-use enabled, 128k context. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
ca92f727c5 |
ci: publish the cloud image in its own parallel job (#10408)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The CI workflow is responsible for producing and publishing the Docker images that power Paperclip deployments > - The cloud image publish was previously coupled to the stock publish job, so a failure or delay in one path could gate the other > - That coupling makes the release pipeline less resilient than it needs to be > - This pull request gives the cloud publish its own top-level job so both publishes can run in parallel without a `needs:` dependency > - The benefit is better failure isolation and less wasted time when one publish path is slow or broken ## Linked Issues or Issue Description No public GitHub issue was found for this change. Problem statement: - The cloud image publish was implemented as trailing work inside the stock publish job. - That setup meant the cloud publish could be delayed or skipped if the stock job failed early. - The desired behavior is for the cloud publish to run independently so a failure in one publish path does not gate the other. Proposed solution: - Split the cloud publish into its own top-level workflow job. - Keep the same cloud-specific build settings and cache behavior. - Preserve the existing top-level concurrency behavior. Alternatives considered: - Keeping both publishes in one job with conditionals or later steps. Rejected because it still couples success and runtime between the two publish paths. ## What Changed - Split the cloud image publish into a separate top-level Docker workflow job. - Removed the dependency coupling so the cloud job does not need the stock job. - Expanded the drift-guard test to assert the two-job structure and the absence of `needs:` on the cloud job. ## Verification - The workflow YAML was parsed successfully and confirmed to contain two jobs: `build-and-push` and `build-and-push-cloud`. - The cloud job was confirmed to have no `needs:` entry. - The drift-guard assertions were reproduced in a dependency-free harness and passed. - PR #10408 completed GitHub Actions with all required checks green, including the e2e shards. - Greptile review completed at 5/5 with no unresolved comments. - No documentation files changed because this is a workflow/test-only change. ## Risks - The workflow now duplicates the prep steps across two runners, so any shared setup change must be kept in sync between both jobs. - The new job increases workflow surface area slightly, which can make future maintenance more verbose. - Overall risk is low because the change is limited to CI orchestration and test coverage. ## Model Used OpenAI Codex (GPT-5, tool-using code assistant) ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
db02ca7402 |
ci: keep in-flight docker builds from being cancelled (#10403)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work
> - The repository uses GitHub Actions workflows to build and publish
Docker images
> - A workflow-level concurrency policy controls whether newer pushes
cancel in-flight builds
> - The current job-level setting can cancel a running image build
before it finishes publishing
> - That leaves the Docker image pipeline brittle when a new push
arrives during an active publish
> - This pull request moves concurrency to the workflow level and
disables cancel-in-progress so running builds finish
> - The benefit is that only pending work is superseded, while a build
already publishing is allowed to complete
## Linked Issues or Issue Description
No public GitHub issue exists for this change. This PR addresses the
Docker workflow concurrency behavior directly: it ensures in-flight
image builds are not cancelled by newer pushes, while still serializing
builds per ref.
## What Changed
- Moved the Docker workflow concurrency block from the job level to the
workflow level.
- Set `cancel-in-progress: false` so an active build can finish
publishing.
- Added a drift-guard test that parses `.github/workflows/docker.yml`
and asserts the workflow-level concurrency policy remains `false`.
## Verification
- `pnpm --filter @paperclipai/server exec vitest run
src/__tests__/cloud-image-bundled-plugins.test.ts`
- `python3 -c "import yaml;
yaml.safe_load(open('.github/workflows/docker.yml'))"`
- Verified the fetched remote branch contains a single commit on top of
`origin/master`.
- Searched GitHub for duplicate or related PRs and issues; none found.
- Checked `ROADMAP.md` and did not find overlapping planned core work.
## Risks
- Low risk: the change is limited to workflow concurrency behavior and a
targeted test assertion.
- If the workflow concurrency key is changed later, the drift-guard test
will fail and require an update.
## Model Used
OpenAI Codex (GPT-5, tool use; context window not surfaced in this
environment)
## Checklist
- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` /
`Closes: #` / `Refs: #` OR (b) described the issue in-PR following the
relevant issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge
---------
Co-authored-by: Paperclip <noreply@paperclip.ing>
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Nicky LeachandPaperclip
|
91c79d28cb |
test(e2e): retry run-lock 409 in signoff-policy agentPatch (#10386)
## Thinking Path > - Paperclip is the control plane people use to manage AI-agent work across companies > - This repository's e2e suite verifies the execution and approval paths that keep the control plane reliable > - The signoff-policy flow uses a helper that runs a heartbeat and then PATCHes the issue with that run id > - That PATCH can race the heartbeat's run-lock ownership and intermittently receive a transient 409 > - When that happens, a single-positive transition fails the shard even though the underlying behavior is only a lock contention race > - This pull request makes the helper retry the 409 path by re-reading the current lock and re-PATCHing under the winning run id > - The benefit is a stable e2e shard without weakening the negative-path assertions that protect the contract ## Linked Issues or Issue Description No public GitHub issue exists for this change. This PR addresses a flaky signoff-policy e2e transition where the helper can lose a run-lock race and receive a transient 409 while the issue is still assigned to the acting agent. ## What Changed - Added bounded retry/backoff handling in the signoff-policy `agentPatch` helper for transient run-lock 409 responses. - Re-read the issue's current lock before retrying so the helper can re-PATCH with the winning run id. - Kept the retry guarded so non-participant rejection and missing-comment 400s still surface unchanged. - Preserved the existing positive-path behavior without adding Playwright retries or weakening assertions. ## Verification - Reviewed the diff shape for a single-file change in `tests/e2e/signoff-policy.spec.ts`. - Verified the pushed commit matches the authorized submit SHA from the handoff. - Confirmed the branch contains only the expected commit and no unrelated history. - The handoff notes record deterministic harness evidence showing the pre-fix helper fails on the 409 race and the post-fix path passes. ## Risks - Low functional risk: the retry is narrowly scoped to the transient 409 lock-contention path. - If the lock semantics change server-side, the helper may need a follow-up adjustment. - The change only affects the e2e helper and does not alter production API behavior. ## Model Used OpenAI Codex (GPT-5, tool-using coding agent) ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
c8c2ae82a3 |
test(e2e): wait for connections fetch before asserting applications status pill (#10384)
## Thinking Path > - Paperclip relies on end-to-end tests to catch regressions in the operator UI > - The applications list status pill is rendered from more than one data fetch, so the visible label can lag behind the row itself > - A default Playwright assertion timeout can expire before the connections fetch finishes under CI load > - That creates a flaky failure without changing the underlying product behavior > - This pull request extends the two status-pill assertions to use the longer timeout already used elsewhere in the spec > - The benefit is the same UI coverage with fewer false negatives ## Linked Issues or Issue Description There is no public GitHub issue linked to this repo-local fix. This PR addresses a flaky Playwright assertion in `tests/e2e/applications-crud.spec.ts`, where the status pill can render after the default assertion timeout because it depends on the connections fetch as well as the applications fetch. ## What Changed - Increased the wait window for the two status-pill visibility assertions in `tests/e2e/applications-crud.spec.ts`. - Kept the assertions anchored to the exact expected labels (`Healthy` and `Not connected`) so the test still verifies the same behavior. ## Verification - The spec is still discovered cleanly by Playwright. - The diff stays limited to `tests/e2e/applications-crud.spec.ts`; there are no product, dependency, or lockfile changes. - The full browser-backed e2e signal remains CI for this change. ## Risks - Low risk. This only changes assertion timing in a test file and does not alter runtime product behavior. ## Model Used OpenAI Codex, GPT-5, tool-using coding agent. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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9ff7e1caf3 |
perf(adapter-utils): content-hash-skip process-session remote script write + lock inbound round-trip count (#10377)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The sandbox runtime depends on efficiently staging files into remote environments > - The process-session bridge was rewriting a static remote script on every start, even when the remote copy already matched > - That caused unnecessary round trips and made the startup path noisier than it needed to be > - This pull request adds a hash-skip path for the process-session script write and keeps the existing bridge-entrypoint hash gate on the same helper > - It also locks in the reduced inbound round-trip count so the collapse from the prior PR cannot silently regress > - The benefit is fewer remote execs on warm starts and a stronger guard against performance regressions ## Linked Issues or Issue Description - Refs: https://github.com/paperclipai/paperclip/pull/10354 ### Feature request-style description **Subsystem affected** - Cross-cutting (packages/adapter-utils and sandbox staging helpers) **Problem or motivation** - The process-session bootstrap path was rewriting a static remote script on every start even when the remote file already matched the host content. - That added avoidable remote execs and latency to warm starts. - The inbound staging collapse from the previous PR also needed a regression lock so it could not silently drift back to extra round trips. **Proposed solution** - Route the process-session remote script upload through the existing hash-skip helper used by the sandbox callback bridge entrypoint. - Keep the bridge-entrypoint behavior unchanged by delegating it to the same helper. - Add a regression test that asserts the inbound staging path still collapses to the expected round-trip count. **Alternatives considered** - Keep the existing unconditional write path and accept the extra execs on warm starts. Rejected because it preserves avoidable overhead. - Add a second specialized helper just for process-session scripts. Rejected because the bridge-entrypoint logic already solved the same problem and should stay aligned. **Roadmap alignment** - This fits the roadmap items around cloud/sandbox agents and enforced outcomes by reducing bootstrap waste and preventing performance regressions. - It does not introduce new product surface area, telemetry, or user-facing workflow changes. **Additional context** - The implementation preserves the existing upload/verify/rename behavior when the remote content differs and only skips the write when the hash already matches. - PR #10354 collapsed the inbound staging path; this PR preserves that win. ## What Changed - Added a shared hash-skip helper for remote text-file synchronization so unchanged content skips the write path after a single remote hash check. - Switched the process-session remote script upload to use that helper, preserving the existing write/verify/rename behavior when the remote content differs. - Refactored the sandbox callback bridge entrypoint sync to use the same helper without changing its observable behavior. - Added a mocked-native-runner regression test that locks the inbound staging path to one `client.syncIn` round-trip per step and zero direct write/run execs. ## Verification - `tsc --noEmit` - `pnpm --filter @paperclipai/adapter-utils exec vitest run` - Full adapter-utils vitest sweep: 338 passed / 4 skipped ## Risks - Low risk: the helper changes when a write occurs, not the script contents or the remote execution surface. - A hash-check failure now fails loudly instead of silently rewriting, which is safer but could surface provider-side issues earlier than before. - The regression test is intentionally specific to the current collapsed staging path, so future architectural changes will need test updates. ## Model Used OpenAI Codex (GPT-5, tool-using coding agent) ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Harold Kim <harold@paperclip.ing> Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky Leach
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341993ebae | feat(sandbox-runtime): route all inbound staging through client.syncIn (Codex home -> native uploadFiles; delete usesCustomProvision gate) (#10354) | ||
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Nicky LeachandPaperclip
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7797995038 |
perf(plugin-daytona): opt-in no-profile fast path for default-PATH execs (#10352)
## Thinking Path > - Paperclip is the control plane for autonomous AI companies > - The Daytona adapter turns tasks into shell commands and manages execution overhead > - Many short-lived exec calls still pay for login-shell profile sourcing even when the binary already resolves on the sandbox default PATH > - That extra startup work adds latency on the hot path for repeated command execution > - This pull request adds an opt-in fast path that skips profile sourcing only when the caller explicitly requests it and the command does not need shell initialization > - The benefit is lower per-call latency for eligible commands without changing the conservative default behavior for commands that need the profile ## Linked Issues or Issue Description This change does not reference a public GitHub issue. It follows the same Daytona startup-speed work as merged PR #10335 and narrows the execution path for eligible commands while keeping the default login-shell behavior intact. ## What Changed - Added an optional `noProfile` flag to `PluginEnvironmentExecuteParams`. - Refactored Daytona login-shell script assembly so the profile and nvm sourcing block is omitted only on the explicit fast path. - Preserved environment prefixing, `cd`, shell quoting, `NONINTERACTIVE_GIT_ENV`, stdin handling, and `durationMs` behavior on both paths. - Added regression tests for the fast path omission, the preserved execution parameters, and the default profile-sourcing path. ## Verification - `pnpm --filter @paperclipai/sandbox-provider-daytona exec vitest run src/plugin.test.ts` - `pnpm --filter @paperclipai/plugin-sdk tsc --noEmit` - Reverted the guard locally to confirm the two behavior tests fail again, then restored the change. ## Risks - If a caller opts into `noProfile` for a command that depends on shell initialization, the command can fail to resolve its binary. - The API comment and opt-in design keep that risk narrow; the default path remains unchanged. ## Model Used OpenAI GPT-5 (Codex tool-using coding agent) ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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0ccba45e4d |
feat(sandbox-providers): native providers honor postUploadCommands (Daytona executes; Kubernetes executes) (#10347)
## Thinking Path > - Paperclip is the control plane for autonomous AI companies, so runtime handoffs have to preserve the exact behavior an agent asked for. > - The sandbox-provider layer is where uploaded files and follow-up commands become a real in-sandbox operation. > - The provider-delegable sync-in seam already exists from the prior PR; without this follow-up, native providers can still accept command-bearing uploads and silently drop the commands. > - That is a fail-open gap for native sandbox providers, because the file transfer succeeds while the intended post-upload work never runs. > - This pull request teaches Daytona and Kubernetes to execute `postUploadCommands` in order, inside the sandbox, after the files land. > - The benefit is consistent and safer sync semantics: native providers either run the commands as requested or fail fast instead of pretending the operation completed fully. ## Linked Issues or Issue Description This PR builds on the previously merged provider-delegable sync-in seam and closes the remaining gap for native providers that still dropped `postUploadCommands`. Problem: - A sync operation could include ordered `postUploadCommands`, but a native provider could finish the file upload and skip the commands entirely. - That creates fail-open behavior for command-bearing uploads, especially when the caller relies on the provider to execute the follow-up action in the sandbox. Proposed fix: - Execute `postUploadCommands` inside the sandbox after file placement. - Preserve the provided command order. - Fail fast on the first non-zero exit or timeout. - Keep command execution verbatim and confine any provided `cwd` under the workspace root. Related public PR: - Refs: #10340 ## What Changed - Daytona `performSyncIn` now executes ordered `postUploadCommands` through the existing `executeCommand` seam. - Kubernetes `performSyncIn` now executes ordered `postUploadCommands` through its streaming pod exec path. - Added workspace confinement for provided `cwd` values and defaulted missing `cwd` to the remote root. - Added tests covering the new post-upload command execution behavior in both provider packages. ## Verification - Latest validation recorded on the handoff branch: `@paperclipai/plugin-sdk` and `@paperclipai/plugin-kubernetes` typechecks passed. - Daytona Vitest: `63/63` passing in `plugin.test.ts`. - Kubernetes Vitest: `195/195` passing, including `file-sync.test.ts`. - `git log --oneline origin/master..HEAD` showed a single expected commit on the branch. ## Risks - Command execution semantics are stricter now, so malformed commands or a bad `cwd` will fail the sync instead of being ignored. - The change makes provider behavior more explicit, which can surface previously hidden failures in callers that assumed commands were optional. - Timeout behavior may differ slightly between providers, so the failure mode is intentionally fail-fast. ## Model Used OpenAI Codex, GPT-5-based coding agent with tool use enabled. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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3d23c3b2c3 |
perf(plugin-daytona): cache the started sandbox handle per lease (#10335)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The Daytona sandbox adapter spends time on repeated per-exec sandbox lookups during a lease > - That repeated lookup is pure overhead once the started sandbox handle is already known and trusted for the lease > - The adapter still needs strict isolation and fail-closed behavior because the handle is an authenticated compute object, not an inert value > - This pull request memoizes the started sandbox handle per lease in a process-scoped cache, and now advances freshness only after successful reuse so failed commands cannot suppress stale-handle refreshes > - The benefit is lower provider-get latency on the hot path while keeping resume safety, teardown safety, and observability intact ## Linked Issues or Issue Description This is a Daytona performance fix, not a standalone public GitHub issue. ### Problem / Motivation - Repeated `client.get(sandboxId)` calls on the sandbox hot path re-fetch a handle that is already started and trusted for the current lease. - The extra provider round-trip is pure overhead on repeated exec, sync, resume, and interactive-cancel flows. - Cache freshness also has to be tied to successful reuse, or a failed command can make a stale sandbox look freshly used. ### Proposed Solution - Cache the started `Sandbox` handle in process memory, keyed by a non-secret composite lease scope. - Enforce strict identity checks and eviction on release, destroy, interactive cancel, and resume-sentinel mismatch. - Block teardown cleanup until active lease operations finish so delete/stop cannot race in-flight execute or sync work. - Advance freshness only after successful execute, sync, or resume reuse, so failed operations do not mask an auto-stopped sandbox. - Preserve `getDurationMs` in exec metadata so provider-get latency remains observable. ### Alternatives Considered - Keep fetching the sandbox on every exec path. - Cache only by bare lease id. ### Roadmap Alignment - This change is part of the Daytona performance work and narrows per-call overhead without changing the public adapter contract. ## What Changed - Memoized the started Daytona `Sandbox` handle in a process-scoped cache keyed by a composite lease scope. - Added fail-closed identity checks so cache hits and single-flight populate paths reject mismatched sandbox ids. - Evicted cached handles on release, destroy, interactive cancel, and resume sentinel mismatch. - Blocked release, destroy, and interactive cancel teardown cleanup until active lease operations drain. - Advanced cache freshness only after successful execute, sync, and resume reuse. - Kept `getDurationMs` in exec metadata so provider-get latency remains observable. - Expanded the Daytona plugin tests to cover same-lease reuse, cross-scope isolation, eviction paths, rejected populate handling, concurrent single-flight behavior, cached-resume sentinel revalidation, teardown cancellation safety, and failed-execute freshness handling. ## Verification - `pnpm exec vitest run --config vitest.config.ts` in `packages/plugins/sandbox-providers/daytona` — 81/81 passing, including the teardown-cancel, snapshot-capture, syncIn-cancel, and failed-execute freshness regressions. - `git rev-parse origin/perf/daytona-sandbox-handle-cache` matched the authorized submit SHA `528158f998fa88bb0748300f156b38d86d6589cd` before the fixup commits. - `git log --oneline origin/master..origin/perf/daytona-sandbox-handle-cache` shows the expected focused Daytona changes. - GitHub duplicate/related PR search and ROADMAP review were completed before opening the PR. - Remote CI and Greptile completed successfully after this description was updated; the PR is now ready for board handoff. ## Risks - The cache is process-scoped, so correctness depends on the eviction paths staying complete. - A bug in the scope key or identity checks could leak reuse across the wrong lease boundaries, but the implementation fails closed on id mismatches. - Teardown now waits for active operations to drain, so any missed activity bookkeeping could delay cleanup instead of racing it. - Freshness updates now happen after success, which is safer, but it means any missed success-path call would trigger an extra refresh rather than silently masking staleness. ## Model Used OpenAI GPT-5 via Codex, tool-using coding agent; exact context window not surfaced in the workspace. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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030dd9d15c |
feat(adapter-utils): provider-delegable syncIn seam with ordered post-upload commands (#10340)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The adapter/runtime layer has to move files into sandboxes safely and efficiently > - The current sync-in path needs a provider-delegable seam so providers can use their native upload transport when available > - The upload contract also needs ordered post-upload commands so extracted content can be finalized fail-fast after transfer > - The fallback path still has to preserve current behavior when the provider does not expose native sync verbs > - This pull request adds the contract and runtime seam for provider-delegable sync-in, plus the single-stream collapse flag > - The benefit is fewer round trips, a cleaner provider-owned upload path, and a compatible fallback for existing runners ## Linked Issues or Issue Description No public GitHub issue exists for this change. The underlying feature request is described below in the repository's feature-request format. ### Problem or motivation Paperclip needs a sync-in path that lets each provider choose the best available upload transport instead of forcing the harness to orchestrate uploads the same way every time. The runtime also needs a way to describe ordered post-upload commands so providers can finalize extracted content fail-fast after transfer. ### Proposed solution Extend the sync contract with ordered post-upload commands, forward that contract through the plugin and environment runtime layers, and make client syncIn always available. When a provider advertises native sync verbs, the client should delegate to that transport; otherwise it should fall back to the existing tarball/write/extract behavior and then run the post-upload commands in order. ### Alternatives considered Keeping upload orchestration entirely host-side would avoid a contract change, but it would block provider-specific transport optimizations and keep the harness responsible for a path the provider can do more efficiently. A separate post-upload API would add another surface without improving the existing sync flow. ### Roadmap alignment This work aligns with the broader runtime and adapter roadmap because it improves provider integration without changing the external product model. It is an additive contract change that preserves backward compatibility for providers that do not expose native sync verbs. ### Additional context The fallback path still needs to preserve existing observable behavior, including command ordering, cwd confinement, and fail-fast execution. The single-stream progress flag is part of the same transport improvement so smaller writes can collapse to a single round trip when the runner supports it. ## What Changed - Added ordered `postUploadCommands` support to the sync operation contract and SDK mirror. - Plumbed the sync-in contract through the plugin and environment runtime layers. - Implemented a runtime client `syncIn` path that delegates to native provider transport when available, otherwise uses the generic tarball/write/extract fallback. - Preserved fail-fast execution of ordered post-upload commands in the fallback path. - Flipped the sandbox runner's single-stream stdin progress flag to collapse small `writeFile` operations to a single round trip. - Added and updated tests for contract forwarding, fallback behavior, cwd rejection, fail-fast behavior, and single-stream collapse. ## Verification - `pnpm --filter @paperclipai/plugin-sdk exec vitest run protocol.postupload.test.ts` - `pnpm --filter @paperclipai/plugin-sdk exec vitest run environment-sync-negotiation.test.ts` - `pnpm --filter @paperclipai/adapter-utils exec vitest run command-managed-runtime.test.ts` - `pnpm --filter @paperclipai/server exec vitest run environment-execution-target.test.ts` - Local typecheck and targeted suite runs reported in the handoff passed before PR creation. ## Risks - The new fallback path could diverge from the previous inline upload behavior if the tarball/extract contract changes. - Provider-native sync handling may expose provider-specific edge cases if a runner advertises sync verbs but does not fully honor the contract. - The single-stream flag changes transport behavior for small uploads, so regressions would likely show up as round-trip or upload failures. ## Model Used OpenAI Codex (GPT-5, tool-using coding agent). ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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a3b293e26d |
perf(adapter-utils): parallelize the two Daytona sandbox bridge setups (#10334)
## Thinking Path > - Paperclip runs AI-agent work through adapter-backed execution paths. > - Sandbox-backed local adapters pay startup overhead in two host-side bridge setups. > - Those setups were happening serially even though most of the work is independent. > - The remaining dependency is only the merged env that must reach the process-session launch. > - This pull request overlaps the independent setup work while preserving that launch-time dependency. > - The benefit is lower end-to-end startup latency without changing execution semantics. ## Linked Issues or Issue Description No public GitHub issue exists for this change. Problem / motivation: - Sandbox-backed local adapter startup waited for two largely independent bridge setups in series, so users paid roughly the sum of both setup times. - The only hard dependency is the merged Paperclip env that must reach the process-session launch. Proposed solution: - Start the paperclip callback bridge and the process-session bridge concurrently. - Keep the env merge as the single sequencing point before process-session launch. - Stop whichever bridge started if either startup path fails. - Keep the concurrent bridge telemetry duration-only so shared runner counters are not double-counted. Alternatives considered: - Keep the bridges serial, which preserves the current telemetry shape but leaves the startup latency unchanged. - Move env merging earlier, which would complicate launch ordering and risk changing runtime semantics. Roadmap alignment: - This is the approved Daytona start-speedup work, focused on bridge startup concurrency rather than broader runtime behavior. ## What Changed - Started the paperclip callback bridge and the process-session bridge concurrently in `execute.ts`. - Added a memoized env finalizer so the process-session launch still waits for the merged paperclip env at the correct moment. - Updated `execution-target.ts` so the process-session bridge can accept a deferred env resolver and consume it only at launch time. - Added tests that cover the overlapped launch path and the failure-cleanup path when one bridge start fails. ## Verification - `pnpm --filter @paperclipai/adapter-utils exec vitest run src/acpx-engine/execute.test.ts` - `pnpm --filter @paperclipai/adapter-utils test` - `pnpm --filter @paperclipai/adapter-utils exec tsc --noEmit` - `git log --oneline origin/master..origin/perf/parallelize-daytona-bridge-setups` - `git diff --stat origin/master...origin/perf/parallelize-daytona-bridge-setups` ## Risks - A regression in the launch-time env merge could change what the process-session bridge sees at startup. - The concurrent start/cleanup logic could leak a bridge if the stop paths were incorrect, which is why the failure cleanup test matters. - This is low-to-moderate risk because the change is isolated to adapter-utils startup plumbing and is covered by targeted tests. ## Model Used OpenAI Codex, GPT-5, tool-using code execution mode. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [ ] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [ ] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Harold Kim <harold@paperclip.ing> Co-authored-by: Paperclip <noreply@paperclip.ing> |
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197718bc00 |
feat(acpx): per-step round-trip + provider-latency attribution for sandbox startup (#10222)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Sandbox-backed runs need more precise startup observability so operators can see where time is spent before an adapter is invoked > - Aggregate startup timing hides which boundary is actually slow, especially in remote execution where the bottleneck can move between host round-trips, provider-boundary latency, and handshake phases > - This pull request keeps the existing startup timing channel additive while attributing the latency to the specific startup steps that caused it > - The benefit is better diagnosis of sandbox startup regressions without changing control flow or introducing a schema migration ## Linked Issues or Issue Description Refs: #10204 This PR extends the existing sandbox run-startup timing observability with per-step round-trip and provider-latency attribution for the Daytona startup path. It keeps the event payload additive and free-form, and it leaves the control flow, database schema, and external adapter interfaces unchanged. ## What Changed - Added per-step round-trip counting for the host-to-sandbox execute seam - Added provider-boundary duration accumulation for the Daytona execute and re-fetch steps - Split the ACP handshake timing into `createRuntimeMs` and `ensureSessionMs` while preserving the warm-handle skip - Kept the startup timing payload additive and did not add a schema migration ## Verification - `adapter-utils` acpx-engine and startup-timing suites: pass - Daytona plugin suite: pass with mocked SDK and injected-clock duration assertions - `server` environment-execution-target suite: pass - `tsc --noEmit` for adapter-utils and server: pass - Git validation: fetched `origin/feat/sandbox-start-step-timing-attribution`, confirmed it matches the authorized submit SHA `53c573266e618af05c57a0720aaa9d9e0452de61`, and confirmed the branch contains only the expected commit on top of `origin/master` - Searched GitHub for duplicate or related PRs/issues; found one closely related merged PR and no open duplicate on this branch - Checked `ROADMAP.md`; the broad sandbox-agent roadmap section does not call out this specific startup-timing attribution work as a duplicate ## Risks - Low risk: the change is additive and only enriches existing timing data - Downstream consumers that assume aggregate-only startup timing may need to tolerate the additional per-step fields - The finer spawn/initialize/session split remains a follow-up in the external ACP client because that hook is not available here yet ## Model Used OpenAI GPT-5, tool-using coding agent ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [ ] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Harold Kim <harold@paperclip.ing> Co-authored-by: Paperclip <noreply@paperclip.ing> |
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cca2806e57 |
test(tool-gateway): make idle-down slot test deterministic via injected clock (#10226)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The server has a gateway layer that coordinates tool execution and runtime slots > - The idle-down test for the local stdio fixture slot was relying on real wall-clock timing > - On slower runners, that made the test nondeterministic because the slot could be reaped before the presence assertion ran > - This pull request switches the test to use the existing injectable clock seam so time only advances when the test says it should > - The benefit is that the idle-down behavior stays covered while the test becomes deterministic and no longer flakes under load ## Linked Issues or Issue Description This PR fixes a flaky gateway test in the server test suite. The `tool-gateway` idle-down scenario was asserting slot presence while also depending on a very short real-time idle TTL and a later sleep-based reap. On loaded runners, the intervening work could exceed the TTL, which caused the slot to disappear early and the assertion to see an empty list. The fix keeps the production code path unchanged and drives the test from the supervisor's existing injectable clock. The test now holds time steady through the presence check, then advances the clock past the idle deadline to trigger the reap deterministically. The original behavioral assertions stay intact: slot reuse, counter increments, metadata, and stop status still get verified. ## What Changed - Replaced the real-time idle-down wait in the `tool-gateway` test with the runtime supervisor's injectable clock seam. - Kept the existing assertions for slot reuse, slot identity, counters, metadata, and stop behavior. - Removed the test's dependency on wall-clock timing so the idle-down path is deterministic under load. ## Verification - Targeted server typecheck passed with `tsc --noEmit`. - `tool-gateway.test.ts` passed in full: 49/49. - The targeted idle-down scenario passed 50/50 in a tight loop with 0 failures after the clock injection change. ## Risks - Low risk: this is a test-only change and does not modify production gateway logic. - The test now exercises the idle-down logic through a controlled clock rather than real elapsed time, which is the point of the fix but does slightly reduce wall-clock realism in the test itself. ## Model Used OpenAI Codex (GPT-5), tool-using coding agent; context window not surfaced in the workspace. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Harold Kim <harold@paperclip.ing> Co-authored-by: Paperclip <noreply@paperclip.ing> |
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762ce5b4ef |
feat(acpx): per-step timing observability for sandbox run-startup (#10204)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Sandbox-backed runs need observable startup behavior so operators can see where time is spent before an adapter is invoked > - The current startup path only surfaced aggregate timing, which makes it hard to identify the slow boundary in the bring-up sequence > - That gap matters because sandbox startup latency is often dominated by one specific step, and aggregate timing hides the bottleneck > - This pull request adds per-step startup timing events for the named sandbox bring-up boundaries > - The benefit is more precise observability with no control-flow change and no schema migration ## Linked Issues or Issue Description ### Subsystem affected Cross-cutting (multiple of the above) ### Problem or motivation Sandbox run startup only exposed aggregate timing. That makes it hard to identify which bring-up boundary is responsible for slow starts, especially in remote or sandboxed execution where the bottleneck can move between workspace setup, skill reconciliation, bridge setup, and adapter handshake. ### Proposed solution Emit a structured timing event for each named startup boundary before the adapter is invoked, so the existing run-event stream carries per-step duration data. This keeps the event path additive and lets operators see which step dominates startup latency without changing control flow or introducing a schema migration. ### Alternatives considered - Keep only the aggregate startup duration: simpler, but it hides the bottleneck and makes regression analysis much harder. - Add a new telemetry sink or schema field: rejected because the existing run-event payload already carries structured event data and does not need a new storage path. - Log unstructured text for each step: rejected because it is harder to query and aggregate than a structured `step` + `durationMs` event. ### Roadmap alignment This fits the roadmap direction around cloud / sandbox agents and enforced outcomes by improving observability for sandboxed execution without changing the control plane model. The roadmap section is broad, but it does not call out this specific startup-timing work as a planned duplicate. ### Additional context This PR is intentionally additive. It records timing for the named startup boundaries in the existing event stream and leaves the bridge, database shape, and adapter invocation order unchanged. ## What Changed - Added a `measureStartupStep` helper that times a startup step, emits one structured `run.startup.step` event, and rethrows failures after recording duration - Wrapped the seven sandbox bring-up boundaries in `execute.ts` so the structured timing covers each named step before adapter invocation - Added unit coverage for the helper and integration coverage for the startup-step events in the adapter-utils execute path - Kept the event path additive, with no bridge change and no database migration ## Verification - `tsc --noEmit` for `@paperclip/adapter-utils` - `pnpm test` in `packages/adapter-utils` equivalent suite coverage: 292 passed, 4 skipped - Adjacent server event/log-store suites: `run-log-store.test.ts` and `heartbeat-run-log.test.ts` passed (11 total) - Git validation: fetched `origin/feat/sandbox-startup-step-timing`, confirmed it matches the authorized submit SHA, and confirmed `origin/master..origin/feat/sandbox-startup-step-timing` contains the expected single commit - Searched GitHub for duplicate or related open PRs/issues and found no overlapping open items - Checked `ROADMAP.md`; the roadmap covers sandboxed environments generally, but does not call out this specific startup-timing observability work as a planned duplicate ## Risks - Low risk: the change is additive and only emits additional structured events - If downstream consumers assume startup events are aggregate-only, they may need to ignore or account for the new `run.startup.step` entries - Timing is measured via the injected clock and event emission happens in a `finally`, so failures still report duration before rethrowing ## Model Used OpenAI GPT-5, tool-using coding agent ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [ ] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Harold Kim <harold@paperclip.ing> Co-authored-by: Paperclip <noreply@paperclip.ing> |
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c9881223e4 |
fix(routines): show routines grouped by folder name (#10201)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The Routines page is part of the operator UI for scheduled routine management > - The grouped-by-folder view was not presenting folder sections inline in the main pane > - That made the folder grouping mode harder to scan and hid the separation between custom folders, Unfiled routines, and built-in routines > - This pull request updates the Routines page rendering so folder groups appear as inline sections and built-in routines still split into their own section afterward > - The benefit is that grouped routines stay readable and the page matches the intended folder organization ## Linked Issues or Issue Description No corresponding public GitHub issue exists, so the problem is described directly below following the bug template. ### What happened On the Routines page, selecting Group → Folder flattened the grouped list into a single "All routines" section with only the separate built-in routines section below it. ### Expected behavior Group → Folder should render one inline section per folder, keep routines with no folder in an Unfiled section, and preserve the separate built-in routines section after the custom folder groups. ### Steps to reproduce 1. Open the Routines page. 2. Change grouping to Folder. 3. Observe the main pane. 4. The routine list is flattened instead of grouped into folder-labeled inline sections. ### Paperclip version / commit Current PR head: `a8e384c838e362de3437c7a88bc7aa38b10fd9c0` on `fix/routine-folder-grouping`. ### Deployment mode Local development workspace for the Paperclip app UI. ## What Changed - Updated the Routines page rendering so grouped folders render as inline sections instead of flattening into a single list. - Kept routines without a folder grouped under Unfiled. - Preserved the built-in routines section after custom folder groups. - Added and updated tests for the folder-grouped rendering behavior. ## Verification - `pnpm --filter @paperclipai/ui exec vitest run src/pages/Routines.test.tsx` - `pnpm --filter @paperclipai/ui typecheck` - `pnpm check:token-gates` ## Risks - Low risk: the change is localized to the Routines page rendering and its test coverage. - The main behavioral risk is accidental grouping regressions if future routine-grouping logic changes without updating the tests. ## Model Used OpenAI Codex, GPT-5, tool-use enabled, 256k-context class model. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [ ] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Harold Kim <harold@paperclip.ing> Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky Leach
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2002c4fff3 | refactor: remove redundant archived project filters (#10177) |