Commit Graph
2969 Commits
Author SHA1 Message Date
scotttong 35c8bfb364 Merge remote-tracking branch 'origin/master' into design/token-extraction
# Conflicts:
#	ui/src/components/IssueThreadInteractionCard.tsx
2026-07-06 21:43:47 -07:00
Nicky LeachandPaperclip 295294d7ce Add read-only issue blocker diagnostics endpoint (#9114)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Agents block each other with `blockedByIssueIds` relationships to
express dependencies
> - Users and tooling have no lightweight way to inspect *why* an issue
is blocked or whether its blockers are themselves ready to resolve
> - A read-only diagnostic endpoint over the existing blocker graph lets
callers understand dependency chains without requiring a full issue-tree
traversal
> - This pull request adds `GET /api/issues/:id/diagnostics/blockers` —
a bounded, read-only projection over each blocker's readiness state
> - The benefit is that callers can surface blocking-chain diagnosis
(e.g. "waiting on N blockers, M of which are themselves blocked") from a
single authenticated request, using only data they already have read
permission for

## Linked Issues or Issue Description

No public GitHub issue exists for this change. Feature description:

**Subsystem affected:** `server/` — REST API & orchestration services;
`packages/shared` — types, constants, validators, API paths

**Problem or motivation**

There is no API endpoint to inspect *why* an issue is blocked or to get
a per-blocker readiness summary. Clients must walk the issue graph
manually or fetch full issue objects, which requires multiple
round-trips and is expensive.

**Proposed solution**

A single `GET /api/issues/:id/diagnostics/blockers` endpoint returns a
bounded projection: root issue summary, an ordered blocker list with
per-blocker `readiness` state, and a top-level `diagnosis` field
summarizing overall blocking status. Authorization mediation omits
blockers the caller cannot read, so `diagnosis` only reflects visible
data.

**Alternatives considered**

A general graph-walk query (too broad/expensive for a targeted
diagnostic call); enriching the existing `GET /api/issues/:id` response
(too coupled to the main response shape and adds weight for callers that
do not need blocker detail).

**Roadmap alignment**

Read-only observability surface over existing data; no database schema
changes. This aligns with tooling that helps users understand dependency
state without mutating anything.

## What Changed

- Added `GET /api/issues/:id/diagnostics/blockers` route to the server
- Returns per-blocker `readiness` state and a top-level `diagnosis`
field summarizing overall blocking status
- Enforces `issue:read` authorization per-blocker: unauthorized blockers
are omitted and do not influence `diagnosis` or `readiness` values
- Added shared TypeScript response types in `@paperclipai/shared`
- Added route-level tests using embedded Postgres
- Added API documentation in the `paperclip` skill

## Verification

```sh
./node_modules/.bin/vitest run server/src/__tests__/issue-blocker-diagnostics-routes.test.ts
pnpm --filter @paperclipai/shared typecheck
pnpm --filter @paperclipai/server typecheck
```

All three commands pass locally.

## Risks

- Read-only endpoint over existing relations — no writes, no schema or
migration changes — low risk
- Authorization mediation intentionally omits unauthorized blockers from
both the list and from `diagnosis`/`readiness`; callers with partial
access will see a narrower picture than the full blocker graph

## Model Used

- Provider: Anthropic
- Model: Claude Sonnet 4.6 (`claude-sonnet-4-6`)
- Context window: 200k tokens
- Mode: Tool use, code generation, extended reasoning

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` /
`Closes: #` / `Refs: #` OR (b) described the issue in-PR following the
relevant issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
canary/v2026.707.0-canary.3
2026-07-06 20:42:40 -07:00
scotttongandClaude Fable 5 a9478eecb3 docs: record C11 — sidebar agents-section unification queued for Run 3
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-06 20:15:39 -07:00
scotttongandClaude Fable 5 d8ace306d3 feat(ui): gallery feedback round 3 — one toggle, canonical agent chips, light-wash text sweep
Four user rulings (intentional visible changes; snapshots NOT
re-baselined):

1+2. Toggle unification: the app's only second switch implementation —
   ToggleField's hand-rolled h-5 w-9 pill with a bg-green-600 track in
   agent-config-primitives.tsx — now renders the canonical ToggleSwitch
   capsule (on = var(--status-task-done)); props/testid preserved. All
   other suspects already used ToggleSwitch; every switch now shares
   one form and one green.
3. Agent-status chips ('Org snippets and quick scan identity' section,
   StatusBadge): statusBadge agent keys route through brandChipBadge —
   running=blue, idle=gray (was yellow tint), paused=amber, and
   active=green (no canonical agent status; user-ruled mapping to the
   brand green family). brandChipBadge moved above statusBadge for
   declaration order. Org.tsx status dots route through agentStatusDot.
4. Dark-tuned-text-on-light-wash class of bug: flagged BudgetPolicyCard
   banner was already fixed in r2; systematic sweep fixed 58 more sites
   in 14 files (50->950, 100->900, 200->800, 300->700 light tiers with
   originals behind dark:, opacity suffixes preserved). Safe leftovers
   documented (InviteLanding dark page, solid-bg badges).

DECISION-SHEET.md: 'Gallery feedback round 3' section. Gates 3/3 CLEAN,
typecheck green, ui build green.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-06 19:10:00 -07:00
Nicky LeachandPaperclip 22001bbd2f feat(db): add migration safety lint
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - The `packages/db` module owns all database migrations via a
sequential numbering system already validated at build time
> - A recent migration introduced an O(n²) batch backfill over a large,
unindexed table — it caused the server's `listen` to block for ~5
minutes on databases with millions of rows
> - Nothing in the current CI pipeline catches large-table migration
risk patterns (DO-loop mutations, batched LIMIT mutations without
support indexes, full-table mutations, non-concurrent index creation)
before they land
> - This PR wires a new static migration-safety checker
(`check-migration-safety.ts`) into the existing `check:migrations` gate
in `packages/db/package.json`, so risky patterns fail CI before reaching
production
> - The checker baselines all historical findings already present in the
codebase, so the gate fails only on *new* unbaselined risky patterns
> - The benefit is that the specific O(n²) backfill shape (and related
patterns) will be caught at author time rather than at incident time

## Linked Issues or Issue Description

**Feature — static migration safety lint**

**Problem or motivation**

Migrations against large tables (millions of rows) have caused
production startup blocks. The root pattern is a batched `LIMIT`-based
backfill iterating via an unindexed column, making each batch a
sequential scan — O(n²) overall. No CI gate exists to flag this class of
problem before merge.

**Proposed solution**

A static SQL-level checker that scans new migration files for known
dangerous patterns against known-large tables, producing structured
findings that are either baselined (suppressed) or fail the build.
Patterns detected: `DO $$ loop` mutations on large tables without a
same-migration support index, batched `LIMIT` mutations on large tables
missing a same-migration support index, unbounded full-table mutations
(no `WHERE` clause), and `CREATE INDEX` without `CONCURRENTLY` on large
tables.

**Alternatives considered**

Runtime instrumentation (only catches issues in production), advisory
locking in migrations (doesn't prevent the pattern), per-migration code
review (doesn't scale consistently).

**Roadmap alignment**

Defensive infrastructure / operational reliability — keeps migrations
from blocking production startups. Not a user-facing feature.

## What Changed

- **`packages/db/package.json`** — extended `check:migrations` script to
run `check-migration-safety.ts` after the existing numbering check
- **`packages/db/src/check-migration-safety.ts`** — new static checker:
SQL pattern matching, rule detection for four dangerous patterns,
baseline diffing, and structured exit with findings summary
- **`packages/db/src/migration-safety-baseline.ts`** — baseline of all
existing historical findings (suppressed from failing the gate); new
migrations matching these patterns without a baseline entry will fail
- **`packages/db/src/table-size-estimates.ts`** — rough table size
estimates from the local dev database; drives `isKnownLargeTable()` used
by the safety rules
- **`packages/db/src/check-migration-safety.test.ts`** — Vitest coverage
for the O(n²) backfill failure mode, suppression via baseline, and each
rule type

## Verification

```bash
# Run the migration safety checker directly
cd packages/db
tsx src/check-migration-safety.ts

# Run tests
cd packages/db
npx vitest run src/check-migration-safety.test.ts

# Run the full migration check gate (numbering + safety)
cd packages/db
pnpm run check:migrations
```

- Tests cover the core O(n²) backfill pattern (the motivating incident),
baseline suppression, and all four rule types
- `check:migrations` now exits non-zero for any new unbaselined
large-table migration risk pattern

## Risks

- **False positives:** Table-size estimates are from a local dev
database snapshot — a table small in dev but large in production would
be missed. Best-effort heuristic.
- **Baseline drift:** If a baselined finding's SQL changes
significantly, the baseline ID (content-hash-based) will no longer match
and the finding will re-surface. Intentional but may surprise authors
doing incremental fixes.
- **SQL parsing limitations:** Regex-based pattern matching rather than
a full AST parser — complex SQL may not be detected. Acceptable for an
initial gate.
- **Low risk to existing behavior:** The gate only fails on *new*
findings not present in the baseline. All existing migrations are
baselined.

## Model Used

- **Provider:** Anthropic
- **Model ID:** `claude-sonnet-4-6`
- **Context window:** 200K
- **Tool use:** yes (file reading, bash, git operations)
- **Reasoning mode:** standard (no extended thinking)

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [ ] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
canary/v2026.707.0-canary.2
2026-07-07 01:43:12 +00:00
scotttongandClaude Fable 5 3da1bbcc5a feat(ui): restyle ToggleSwitch to shadcn capsule form, status-green on-state
Registry radix-luma Switch form (border-2 capsule track, oval thumb,
bg-input off-state) on the existing button API — no Radix dep, no
call-site changes. On-state uses var(--status-task-done) per user
ruling instead of bg-primary; deviation documented in the component.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-06 18:41:11 -07:00
scotttongandClaude Fable 5 e2c6f4b4b7 feat(ui): gallery feedback round 2 — incident-card legibility, bar-fill stragglers, cyan liveness sweep
Three user rulings from the tune-session gallery (intentional visible
changes; snapshots NOT re-baselined):

A. BudgetIncidentCard hard-stop card was unreadable in LIGHT mode
   (pre-existing: dark-tuned red-50/100/200 text over the light pink
   gradient, no light variants). Eyebrow/title/description/banner/icon/
   validation now use red-600..950 light text with the original dark
   classes behind dark:; same treatment for sibling BudgetPolicyCard
   statusTone chips + red banner. B1 gradient tokens untouched.
B. Remaining bar-fill stragglers -> canonical status hues:
   ClaudeSubscriptionPanel fillClass and ProviderQuotaCard quota-window
   fills (red-400 -> bg-(--status-task-blocked), amber/yellow-400 ->
   bg-(--status-task-todo), green-400 -> bg-(--status-task-done)).
   BudgetSidebarMarker is an icon badge, not a bar — left.
C. Systematic cyan->status-blue liveness sweep (~50 sites / 20 files):
   running tones, live dots/pings, Live surfaces (LiveRunWidget,
   ActiveAgentsPanel Live-now box, AgentDetail live card, IssueDetail
   Live pill), scheduled-retry family, externalObjectStatus running
   maps, timeline now-marker #2dd4bf -> #2563eb, and liveness glow
   shadow token VALUES --shadow-extract-1/11/14 rgba(6,182,212,0.08) ->
   rgba(37,99,235,0.08) (sites unchanged). Non-liveness cyan left and
   documented (xterm cursor, on_demand chips, assets chip, import
   rename text, recovery_required, ledger Advanced/snoozed, UxLab).

DECISION-SHEET.md: 'Gallery feedback round 2' section. Gates 3/3 CLEAN,
typecheck green, ui build green.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-06 18:37:50 -07:00
scotttongandClaude Fable 5 59e536fc08 feat(ui): gallery feedback round 1 — destructive revert, status bar fills, running=blue
Three user rulings from the tune-session gallery review (all intentional
visible changes; snapshots NOT re-baselined):

1. Dark-mode --destructive reverted to master's original
   oklch(0.637 0.237 25.331) (preset's softer red rejected); light
   untouched.
2. Budget/quota progress-bar FILLS re-pointed at canonical status hues
   (bar-fill elements only): healthy -> bg-(--status-task-done),
   warning -> bg-(--status-task-todo), exceeded/hard-stop ->
   bg-(--status-task-blocked) in BudgetPolicyCard, QuotaBar (covers
   ProviderQuotaCard/BillerSpendCard surfaces), Costs, and
   CodexSubscriptionPanel (escalation tiers; healthy stays bg-primary/70
   by design — flagged). Left: Org.tsx status dot, chip washes/borders.
3. RUNNING chips/labels cyan -> canonical blue: IssueChatThread running
   chip now composes brandChipBadge.blue (layout unchanged);
   RunTranscriptView running label via new runningLabelText export
   (hexes stay in lib/status-colors.ts, gate-clean); statusBadge.running,
   agentStatusDot.running, AgentDetail runStatusIcons.running -> blue.
   Left + flagged: externalObjectStatus* running (open already blue in
   those maps) and the cyan 'Live' branding family (dedicated decision
   recommended).

DECISION-SHEET.md: 'Gallery feedback round 1' section added. Gates 3/3
CLEAN, typecheck green, ui build green (token bar-fill classes verified
in built CSS), vitest 103/103 on touched components.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-06 18:05:35 -07:00
scotttongandClaude Fable 5 46d9a3c0c9 feat(ui): collapse type tokens to named ladder via codemod (B3, preset-tune step 3)
VISIBLE CHANGE, contact-sheet review to follow; snapshots intentionally
NOT re-baselined. Executes the user-locked DECISION-SHEET.md B3 ladder
with the committed, idempotent scripts/codemod-type-ladder.mjs
(re-runnable; exact-string site map incl. closing parens so --ls-0_1 /
--ls-0_12-style prefixes cannot mis-match; fails loudly on leftovers).

Font sizes (730 sites): --fs-9/10 -> --text-nano 10px (249);
--fs-11/--fs-0_7rem -> --text-micro 11px (416 + 2 inline var());
--fs-12 -> Tailwind text-xs (24); --fs-13 -> --text-compact 13px (26,
'sm 13' renamed to avoid colliding with text-sm=14px); --fs-14/15 ->
Tailwind text-sm (13). Letter-spacing (202 sites): 0.08/0.1em ->
--tracking-label (13); 0.12/0.14/0.16em -> --tracking-eyebrow (90);
0.18/0.2/0.22/0.24em -> --tracking-caps (99). All --fs-*/--ls-*
definitions deleted; named ladder minted in the non-inline Batch 2
:root block (no @theme entries needed — text-(length:--x)/tracking-(--x)
forms verified in built CSS: tokens + font-size/letter-spacing var()
rules all emit). Sites moved to text-xs/text-sm additionally pick up the
Tailwind scale line-height (text-(length:--x) set font-size only) —
part of the reviewable change. 143 tsx files + index.css rewritten;
gate-script comment example refreshed; DECISION-SHEET.md B3 -> EXECUTED
(pending contact-sheet). Gates 3/3 CLEAN, typecheck green, ui build
green, vitest sanity (IssueChatThread/MarkdownBody/CommentThread
135/135). No test files referenced the old forms, so no lockstep test
edits were needed.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-06 17:29:20 -07:00
scotttongandClaude Fable 5 8b60395861 feat(ui): derive full radius ladder from the --radius knob (B4)
sm/md/lg/xl now calc()-derived (monotonic 3.2/5.2/7.2/11.2px at the
preset's 0.45rem), replacing the legacy square-brand lg/xl = 0px.
One token edit retunes every corner in the app.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-06 17:21:16 -07:00
scotttongandClaude Fable 5 a25dfa64a2 feat(ui): apply shadcn preset b1VlJj4S as token values only
--radius 0 -> 0.45rem, monochrome chart ramp, refined dark surfaces
(alpha borders/input, lighter primary, softer destructive, elevated
sidebar), derived 2xl/3xl/4xl radii, base-layer outline-ring default.
Scaffolding churn reverted: utils.ts gutting, components.json restyle,
fontsource/phosphor/shadcn-css/tw-animate deps (local Inter kept).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-06 17:20:27 -07:00
sparkerosandClaude Opus 4.7 ec2d87d353 fix(openclaw-gateway): bump adapter PROTOCOL_VERSION to 4 to match gateway (#5984)
## Summary

Local OpenClaw gateways since v2026.5.x require
`MIN_CLIENT_PROTOCOL_VERSION = 4` (see
[openclaw/src/gateway/protocol/version.ts](https://github.com/NousResearch/openclaw/blob/main/src/gateway/protocol/version.ts)).
The Paperclip openclaw_gateway adapter at v0.3.1 still sends
`PROTOCOL_VERSION = 3`, which produces a WebSocket close (code 1002
\`protocol mismatch\`) before any auth challenge is issued.

## Symptom

Every \`openclaw_gateway\` agent run fails with:
- \`errorCode: openclaw_gateway_request_failed\`
- \`error: protocol mismatch\`

OpenClaw gateway journal:
\`\`\`
[ws] protocol mismatch conn=... remote=127.0.0.1 client=gateway-client
backend vpaperclip
[ws] closed before connect conn=... peer=...->127.0.0.1:18789 code=1002
reason=protocol mismatch
\`\`\`

## Fix

One-line bump in
[\`packages/adapters/openclaw-gateway/src/server/execute.ts:89\`](packages/adapters/openclaw-gateway/src/server/execute.ts#L89):
\`PROTOCOL_VERSION = 3\` → \`PROTOCOL_VERSION = 4\`. No protocol
semantics changed — the adapter's existing frames are compatible with
v4.

## Test plan

- [x] \`pnpm --filter @paperclipai/adapter-openclaw-gateway typecheck\`
clean
- [x] \`pnpm --filter @paperclipai/adapter-openclaw-gateway build\`
clean
- [x] Verified locally: openclaw_gateway agent connects + receives
challenge + completes auth handshake after the bump

## Related

- Same root cause affects every openclaw_gateway-backed agent in the
field. Sparkeros companies SparkEros, Inc. and SparkEros AOS Inc. both
hit it.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
canary/v2026.707.0-canary.1
2026-07-06 19:20:11 -05:00
scotttongandClaude Fable 5 313e174765 test: re-baseline the 2 approved ActivityCharts snapshots; close B5
User approved the status-hue alignment on the before/after contact
sheet. Suite 510/510 against the updated baseline.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-06 17:00:28 -07:00
Nicky LeachandPaperclip a371ceec60 Fail projectless git-worktree workspaces during heartbeat setup (#9118)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Agent work can run in shared, isolated, or operator-branch execution
workspaces
> - Isolated/operator git-worktree modes require a real git checkout as
their base
> - A projectless issue can otherwise resolve to the agent fallback
workspace directory
> - That fallback is not a valid project checkout for git worktree setup
> - This pull request adds a setup-time guard before workspace
realization starts
> - The benefit is that misconfigured work fails with a typed
remediation instead of raw git errors or accidental execution from the
agent home directory

## Linked Issues or Issue Description

No public GitHub issue was found for this specific failure mode. Inline
description follows the bug report template:

**What happened?**
When a Paperclip issue has no associated project (`projectId: null`) and
is configured for `isolated_workspace` or operator-branch execution with
`strategy: git_worktree`, the heartbeat setup silently fell back to the
`agent_home` directory as the base workspace. Because `agent_home` is
not a git repository checkout, the subsequent git worktree operations
either failed with raw git errors or — in the degraded path — ran in the
wrong directory entirely.

**Expected behavior**
A projectless issue requesting `git_worktree` execution should fail
immediately at setup with a typed `workspace_validation_failed` result
and a human-readable remediation message explaining that a project
workspace or a reusable execution workspace with a valid git base is
required.

**Steps to reproduce**
1. Create a Paperclip issue with `projectId: null` (no project
attached).
2. Assign it to an agent configured for `isolated_workspace` execution
with `strategy: git_worktree`.
3. Trigger a heartbeat run.
4. Observe: the heartbeat resolves the base workspace to `agent_home`
and either emits raw git errors during worktree setup or silently
executes from an incorrect directory.

**Paperclip version or commit**
`5cdf5103c` (current `master` HEAD at time of fix)

**Deployment mode**
Local dev (`pnpm dev`) / built from source — reproduces in any mode
because the fallback is in core workspace resolution logic.

**Agent adapter(s) involved**
Not adapter-specific (core bug — affects all adapters that issue
heartbeats for projectless tasks)

**Database mode**
Not database-related

**Access context**
Agent (bearer API key via `agent_api_keys`)

## What Changed

- Added a heartbeat setup guard that validates isolated/operator
`git_worktree` base workspaces before realization.
- The guard fails projectless `agent_home` fallback cases with a typed
`workspace_validation_failed` result and remediation text.
- The guard also fails non-git project base directories before raw git
worktree operations run.
- Added regression coverage for projectless isolated mode,
operator-branch mode, non-git bases, valid git bases, and
shared-workspace no-op behavior.

## Verification

- `pnpm exec vitest run
server/src/__tests__/heartbeat-workspace-session.test.ts`
- `pnpm exec vitest run server/src/__tests__/workspace-runtime.test.ts`
- `pnpm --filter @paperclipai/server typecheck`
- `pnpm -r typecheck`
- `pnpm test:run`
- `pnpm build`

## Risks

- Low risk. The new guard only applies to issue-backed isolated/operator
execution modes using `git_worktree`; shared workspaces and
non-git-worktree strategies are left unchanged.
- The intentional behavior shift is that invalid git-worktree bases now
fail earlier with a structured remediation instead of reaching
lower-level git setup.

## Model Used

- OpenAI GPT-5 Codex, coding-agent tool-use mode with local command
execution; context window size not exposed by this runtime.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
canary/v2026.707.0-canary.0
2026-07-06 16:48:05 -07:00
scotttongandClaude Fable 5 b1adf5bb18 feat(ui): align ActivityCharts status hues with canonical --status-task-* tokens (B5)
VISIBLE CHANGE, staged for contact-sheet review (DECISION-SHEET.md B5,
DESIGN.md principle 5 — one status vocabulary everywhere): the per-status
chart series in ActivityCharts.tsx re-point at the canonical status
system instead of an independent palette — todo #3b82f6 blue -> amber
(--status-task-todo #f59e0b), in_progress #8b5cf6 violet -> blue
(#2563eb), in_review #a855f7 -> #7c3aed, done #10b981 -> #22c55e,
blocked #ef4444 -> #dc2626, cancelled #6b7280 -> #a8aeb2. 'backlog'
keeps --project-none per the B5 ruling; priority series, success-rate
tints, and the unknown-status fallback are not status hues and are
untouched. The three now-orphaned tokens (--hex-3b82f6/8b5cf6/a855f7)
are deleted; stale status references scrubbed from surviving token
comments. Visual snapshots intentionally NOT updated — diffs exported
for user review.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-06 16:43:23 -07:00
Nicky LeachandPaperclip 329652a2dd refactor(db): add migration authoring checklist (#9122)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Paperclip stores agent work in a PostgreSQL database that evolves
via numbered sequential migrations
> - Migrations that run large unbounded table scans can block the
server's `listen()` call during upgrades, causing multi-minute startup
stalls on large databases
> - Migration 0126 ran a full sequential scan backfill over
`issue_comments` for derived attribution columns — O(n²) due to
unindexed `LIMIT`/`OFFSET` batching, pegging CPU for ~5 minutes on a 3–4
M row table
> - The safe fix (landed in #9108) replaced 0126 with a new forward-only
migration using a partial index + keyset pagination backfill
> - But the root cause is the absence of author-time guidance:
contributors have no documented rules for writing bounded, indexed
migration backfills before they land
> - This PR adds a migration authoring checklist to `doc/DATABASE.md` so
future contributors have those rules at hand before opening a PR
> - The benefit is a durable, discoverable guide that prevents the same
class of startup-blocking slowness before it reaches production

## Linked Issues or Issue Description

This PR is a documentation follow-on to #9108, which landed the fast
0132 migration fix. It adds author-time guidance that captures the
root-cause lesson from that incident.

No separate public issue exists for the doc addition; the motivation is
described above.

Refs #9108

## What Changed

- `doc/DATABASE.md`: Added a **Migration authoring checklist** section
with rules for indexed, bounded backfill batches — keyset pagination
over `LIMIT`/`OFFSET`, mandatory partial index, idempotent guards, and
split-phase schema-vs-data changes. The `check:migrations` CI gate is
referenced as the enforcement backstop.

## Verification

- `git diff --check -- doc/DATABASE.md` passes (no whitespace errors).
- No executable code changed; the checklist is an additive documentation
section.

## Risks

Low. The change is additive text in `doc/DATABASE.md`. No schema,
migration, or code changes. No behavioral diff.

## Model Used

Claude claude-sonnet-4-6 (Anthropic, 200 K context, tool use) — used to
author the migration authoring checklist and coordinate the PR workflow.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with \`Fixes: #\` /
\`Closes #\` / \`Refs #\` OR (b) described the issue in-PR following the
relevant issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub \`#NNN\` /
\`github.com/paperclipai/paperclip\` URLs)
- [x] My branch name describes the change (e.g. \`docs/...\`,
\`fix/...\`) and contains no internal Paperclip ticket id or
instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-06 16:42:49 -07:00
scotttongandClaude Fable 5 41c0b80941 docs: record B1/B4/B5 + C1-C10 rulings; name palette classes in DESIGN.md principle 2
DESIGN.md principle 2 now states Tailwind palette classes are hardcoded
values in spirit — in-scope debt for a dedicated Run 4, not currently
gated — and notes the B1 first-party-decoration allowlist exception.
COMPONENT-INVENTORY.md section 6 items get their decided dispositions
(C1 split deliberate, C2/C3 Run 3 prep investigations, C4 keep five,
C5 Run 3 swap list, C6 dedicated review excluded from Run 3, C7/C8
deliberate custom/intentional exception, C9 deferred to Run 4 with
sonner-facade alternative, agentStatusBadge item marked resolved by A1).
DECISION-SHEET.md: B1 APPROVED (middle path, executed), B4 DEFERRED to
preset session, B5 APPROVED pending contact-sheet review, C1-C10 set.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-06 16:42:01 -07:00
scotttongandClaude Fable 5 98429ed6bc refactor(ui): revert demo-only decoration tokens to inline literals (B1 middle path)
DECISION-SHEET.md B1 user ruling: first-party intentional one-off
decoration on demo/UX-lab surfaces stays inline; production decoration
tokens stay tokens. Reverted 27 singleton tokens whose only consumers
are *UxLab.tsx pages — 19 gradients (--gradient-extract-5,6,8-24) and 8
shadows (--shadow-extract-15,16,17,19-23) — restoring the original
bracket-literal utilities (verified byte-exact against pre-extraction
commit 38532283e) at 35 call sites, deleting their index.css
definitions, allowlisting the 4 UxLab pages for check-token-gates, and
extending the allowlist criteria doc-comment. KEPT the 22
production-consumed tokens (gradients 1,2,3,4,7,25,26 + 15 shadows);
--shadow-extract-4/5 kept because ChatComposer.tsx and IssueChatThread.tsx
consume them in production, not just ChatComposer.test.tsx. Zero
rendered-output change (visual suite 510/510).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-06 16:42:01 -07:00
5163208c3c Add workspace branch ancestry diagnostics (#9117)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Agents run in git worktrees tied to a workspace branch; when the
actual branch diverges from the expected one (e.g. a parent feature
branch was renamed), Paperclip currently has no structured field to
report *why* the branch is incoherent or whether it can be
auto-reconciled
> - The workspace-incoherence fingerprint already captures SHA
mismatches, but there is no evidence field distinguishing "actual branch
is a descendant of expected" (safe to fast-forward) from "branches have
diverged" (needs human review) or "SHAs are unavailable" (unknown)
> - Operators and future recovery flows need a typed verdict to make
decisions without re-running git commands themselves
> - This pull request adds `ancestryVerdict` and `plainLanguageReason`
evidence fields computed via `git merge-base --is-ancestor`, and
scaffolds the off-by-default `enableWorkspaceBranchReconcileForward`
instance setting with no runtime behavior yet
> - The benefit is that future recovery logic can branch on a typed
verdict rather than parsing prose, while the fingerprint v1 payload
stays stable

## Linked Issues or Issue Description

No public GitHub issue pre-exists for this diagnostic addition.

**Problem or motivation**

When Paperclip detects that an agent's actual workspace branch differs
from the recorded expected branch, the current fingerprint carries only
raw SHAs. There is no typed field indicating whether the actual branch
is a descendant of the expected one (safe reconcile path) vs. a true
divergence (requires human intervention) vs. an indeterminate state
(missing SHAs or git errors). Downstream recovery logic cannot branch
safely without re-running git.

**Proposed solution**

Add `ancestryVerdict` and `plainLanguageReason` to the workspace
incoherence evidence type; compute via `git merge-base --is-ancestor`;
scaffold a feature-flag for future forward-reconcile behavior
(`enableWorkspaceBranchReconcileForward`, off by default, not yet read
by any runtime path).

**Alternatives considered**

Encoding the verdict in the existing fingerprint string was rejected
because the fingerprint is a stable identity hash, not a mutable
evidence bag. Changing it would break monitors keyed on the string.

**Roadmap alignment**

Supports future workspace auto-reconcile work; ROADMAP.md has no
conflicting entry for this diagnostic layer.

## What Changed

- `packages/shared/src/types/heartbeat.ts` adds `ancestryVerdict` and
`plainLanguageReason` fields to `WorkspaceIncoherenceEvidence`
- `packages/shared/src/types/instance.ts` adds
`enableWorkspaceBranchReconcileForward` boolean (off by default)
- `packages/shared/src/validators/instance.ts` exports the new flag from
the settings validator
- `server/src/services/workspace-runtime.ts` computes `ancestryVerdict`
via `git merge-base --is-ancestor`; falls back to `unknown` on missing
SHAs or command errors; excludes verdict fields from fingerprint v1
computation
- `server/src/services/instance-settings.ts` wires the new setting
through to the settings service
- Tests updated in `workspace-runtime.test.ts`,
`instance-settings-service.test.ts`, `instance-settings-routes.test.ts`,
and `instance.test.ts` (104 tests total)

## Verification

```bash
pnpm exec vitest run \
  server/src/__tests__/workspace-runtime.test.ts \
  server/src/__tests__/instance-settings-service.test.ts \
  server/src/__tests__/instance-settings-routes.test.ts \
  packages/shared/src/validators/instance.test.ts
# 104 tests pass

pnpm --filter @paperclipai/shared typecheck
pnpm --filter @paperclipai/server typecheck
# both exit 0
```

Manual: trigger a workspace incoherence event and confirm the evidence
object carries `ancestryVerdict` and `plainLanguageReason`; confirm the
fingerprint string stays `workspace_incoherence:v1:sha256:...`.

## Risks

**Low risk.** Purely additive. Fingerprint v1 payload is unchanged. The
new flag has no runtime effect in this PR. `git merge-base
--is-ancestor` exits non-zero for both "not an ancestor" and "command
error"; both are handled and collapsed to typed values with a prose
reason.

## Model Used

Provider: Anthropic, model: Claude Sonnet 4.6 (`claude-sonnet-4-6`),
200k context, tool use enabled.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [ ] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [ ] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-07-06 16:29:01 -07:00
scotttongandClaude Fable 5 47778b233f docs: record Run 2 review outcomes in DECISION-SHEET.md (A1-A6, B2, B3)
A1-A6 set to APPROVED with per-item results (A4 = policy only, no code
change; A2 consolidated only the provably byte-identical readable-text
pair). B2 set to APPROVED — own Run 4 later; B3 set to APPROVED — ladder
locked, lands with preset session. Verified on the final tree:
check:token-gates 3/3 CLEAN, typecheck green, test:storybook-visual
510/510 vs the Phase 0 baseline at maxDiffPixels 0.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-06 16:23:05 -07:00
scotttongandClaude Fable 5 b76a7955aa refactor(ui): decouple chat liveness blue from status token via --liveness-blue (A6)
IssueChatThread's human-message bubble reused --status-task-in_progress
(Batch 1; the shared #2563eb is a semantic coincidence, not a real
dependency). Mint --liveness-blue: #2563eb in the extracted-tokens block
and re-point the bubble class plus the lockstep negative assertion in
IssueChatThread.test.tsx, so a future status-hue change no longer drags
the chat bubble along. Same value today — zero rendered-output change.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-06 16:19:16 -07:00
scotttongandClaude Fable 5 7929aabeba refactor(ui): mint --paperclip-code-highlight-* vars at their fallback values (A5)
FileViewerSheet's code-line highlight referenced
--paperclip-code-highlight-bg / --paperclip-code-highlight-border without
either var ever being defined, so rendering always came from the var()
fallbacks. Define both in the extracted-tokens :root block at exactly the
former fallback values (rgba(250,204,21,0.12) / rgb(234,179,8)) and drop
the now-redundant fallbacks from the Batch 4 --code-highlight-*-resolved
wrappers. Call sites in FileViewerSheet.tsx unchanged. Nothing anywhere
sets these vars at runtime (verified via rg), so pixels are identical.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-06 16:18:33 -07:00
scotttongandClaude Fable 5 7e3e59db26 refactor(ui): rename project-fallback tokens to --project-seed / --project-none (A3)
Pure rename, values unchanged (#6366f1 / #64748b): the two Batch 1
--hex-* tokens for project-color fallbacks get semantic names.
--project-seed = new-project indigo seed default (ProjectDetail,
PipelineSettings x2, IssueProperties x2, NewIssueDialog x2);
--project-none = no-project-assigned muted slate (Routines x2,
MarkdownEditor, RoutineRunVariablesDialog x2, RoutineList,
editable-sections x2, ActivityCharts 'backlog'). 16 call sites + the two
index.css definitions. Zero rendered-output change.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-06 16:17:57 -07:00
scotttongandClaude Fable 5 383460bb2e refactor(ui): consolidate byte-identical readable-text contrast pair (A2)
Of the three flagged contrast-pair sites, only one pair is provably
byte-identical across files: #f8fafc/#111827 (readable light/dark text)
duplicated in lib/color-contrast.ts and lib/worktree-branding.ts. Export
it once from color-contrast.ts as READABLE_TEXT_LIGHT/READABLE_TEXT_DARK
and import it in worktree-branding.ts.

Left untouched as semantically distinct (per DECISION-SHEET.md A2 'verify
per-pair first'): ThemeContext.tsx's <meta theme-color> pair
(#18181b/#ffffff — browser chrome color, not contrast math; and #ffffff
!= #f8fafc), color-contrast.ts's DARK_BG/LIGHT_BG compositing backgrounds
(RGB objects), and worktree-branding.ts's #000000 hex-parse fallback.
Zero rendered-output change.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-06 16:17:13 -07:00
scotttongandClaude Fable 5 5ecc0f9e47 refactor(ui): collapse dead agentStatusBadge duplicate into brandChipBadge (A1)
agentStatusBadge in lib/status-colors.ts was byte-for-byte identical to
brandChipBadge for all 4 of its keys (gray/blue/amber/red) and had zero
importing call sites — delete the duplicate map, keep brandChipBadge as
the single brand .task-chip style source. AgentBadgeColor remains (used
by agentStatusColor/agentStatusCapsule) and is a subset of BrandChipColor.
Zero rendered-output change.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-06 16:16:48 -07:00
Evyatar Bluzer c5d73844a5 fix(a11y): add tooltips and aria attributes to agent view toggle (#1937)
## Problem

On the Agents page, there are two small icon buttons for switching
between list view and org chart view. But these buttons had:
- No title attribute, so hovering show nothing
- No aria-label, so screen readers just say "button"
- No aria-pressed, so no way to know which view is active
- No role="group" on the container

I was confused the first time I see these buttons because one is a list
icon and the other is a git-branch icon, and without hovering or
clicking I had no idea what they do. Specially the git-branch icon - is
it for branches? Repos? No, it's for org chart view.

## What I changed

- Added `title` to each button: "List view" and "Org chart view"
- Added `aria-label` matching the title for screen readers
- Added `aria-pressed` to indicate which view is currently selected
- Added `role="group"` with `aria-label="View mode"` on the container
div

## How to test

1. Go to Agents page (must have more than 1 agent for toggle to appear)
2. Hover over the list icon - should see "List view" tooltip
3. Hover over the branch icon - should see "Org chart view" tooltip
4. Use screen reader - should announce "List view, pressed" or "Org
chart view, not pressed"

1 file, 7 lines added.
canary/v2026.706.0-canary.9
2026-07-06 16:03:10 -07:00
scotttongandClaude Fable 5 e0bbf3c911 refactor(ui): extract remaining bracket values, add token gate check (Phase 2 batch 4/4)
Final batch of the design-token extraction: mints tokens for every
remaining value-bearing arbitrary Tailwind bracket in
ui/src/components/** and ui/src/pages/**, then adds a gate script so
the "zero hardcoded value" rule is enforced going forward instead of
re-audited by hand each time.

Codemod: scripts/codemod-extract-misc.mjs (198 sites, 84 files, 96 new
tokens: 58 --gtc-*/3 --gtr-* grid track lists, 19 --tp-*
transition-property lists, 6 --z-* z-index values, --s-*/--e-*/--va-*/
--sw-* scale/ease/vertical-align/stroke-width, 2 --blur-*, 1
--drop-shadow-extract-*, 4 *-resolved wrapper tokens resolving
FileViewerSheet.tsx's half-migrated var(x, fallback) sites Batch 1
deferred, and 2 --gradient-extract-* continuing Batch 1's counter for
2 hsl(var())/color-mix() gradient sites its color-literal audit didn't
catch). Mandatory Step 0 syntax spike confirmed every paren form
byte-equivalent via scratch stories + built-CSS grep, and confirmed
the tw-animate-css plugin utilities (zoom-in-[0.97] etc.) are
currently dead/no-op classes (plugin not installed) — allowlisted,
not rewritten, since there's no visual behavior to preserve or change.

Gate script: scripts/check-token-gates.mjs (new, wired as
`pnpm check:token-gates`) implements the three DONE-WHEN gates
(hex/color-literal, arbitrary-bracket-value, raw-font-size) over
ui/src/components/** and ui/src/pages/**, parsing a new
machine-readable ALLOWLIST block appended to ui/src/index.css that
consolidates Batches 1-3's free-form allowlist prose into
`* allow <path> — <reason>` lines. Resolved TOKEN-AUDIT.md's open
"test file policy" question by allowlisting 43 test-fixture hex-literal
sites across 18 *.test.tsx files (mock prop/API-response data, not
rendered CSS). Gate exits 0 clean.

AGENTS.md's existing Design system section now names the gate command.
TOKEN-AUDIT.md gets a Batch 4 log appendix with counts, allowlist
rationale, and the remaining out-of-scope debt (36 hex sites in
ui/src/lib|context|plugins; the ~3,115-site Tailwind-palette-class
scope question is still unresolved and flagged for a human decision).

Verify: node scripts/check-token-gates.mjs exit 0 (all 3 gates clean);
pnpm build-storybook exit 0; Storybook visual suite 510/510 (Playwright,
tests/storybook-visual); pnpm typecheck (ui/) exit 0; codemod idempotent
on re-run.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-06 15:50:09 -07:00
scotttongandClaude Fable 5 be63424987 refactor(ui): extract size/spacing/radius/shadow values to tokens (Phase 2 batch 3/4)
Batch 3/4 of the design-token extraction (design/token-extraction). Replaces
hardcoded Tailwind arbitrary-bracket values for width/height/min/max,
padding/margin/gap/inset/translate, radius (incl. directional), ring/outline
width, and box-shadow in ui/src/components/** and ui/src/pages/** (including
*.test.tsx companions) with references to new CSS custom-property tokens in
ui/src/index.css. Zero visual change, proven by the Phase 0 Storybook
snapshot baseline.

Counts:
- 407 sites rewritten across 140 files (127 component/page + 13 test files
  updated in lockstep with the components they assert against).
- 163 new tokens minted: 127 --sz-* (one shared family across
  width/height/spacing/gap/inset/translate lengths, including 42
  --sz-calc-N compound calc()/min()/max()/clamp() expressions and 2
  --sz-safe-* env(safe-area-inset-*) wrappers), 8 --rad-* (shared across
  radius/ring-width/outline-width), 5 --pct-* (incl. --pct-neg-50 kept
  distinct per the source bracket's own negative sign), 23
  --shadow-extract-* (38 sites, deduped by exact value).
- 11 var()-only passthrough sites (--radix-*-trigger-width/height,
  --new-issue-dialog-height) rewritten to the bare paren form with no new
  token minted, per DESIGN.md's runtime-library-variable special case.
- 3 sites resolved Tailwind's build-time calc(theme(spacing.N)-Mpx) into a
  byte-equivalent runtime calc() (components/IssueRow.tsx), verified via
  headless-browser computed-style comparison against the pre-change built
  CSS.
- 2 sites skipped/allowlisted: rounded-[inherit] (CSS keyword, not a
  literal) and drop-shadow-[...] (different utility than this batch's
  shadow-[...] mandate) — logged as a Needs-human-decision item.

Three gotchas found and fixed during verification (all documented in the
codemod header and TOKEN-AUDIT.md's Batch 3 log): a boundary regex bug that
false-positived inside Tailwind's own slide-out-to-top-[1%] compound
utility, a calc()-operator-spacing bug that could corrupt
env(safe-area-inset-*) identifiers, and a generated-CSS-comment bug where a
literal "*/" substring in prose silently dropped the entire token block
from the compiled CSS (root cause of an initial 222-test snapshot failure,
fully resolved to 510/510 passing).

Verify: rg gates clean, pnpm build-storybook exit 0, Storybook visual
snapshot suite 510/510 (509 clean + 1 known-benign flaky retry), pnpm
typecheck exit 0, codemod re-run confirmed idempotent.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-06 15:15:08 -07:00
5cdf5103c9 docs(spec): humans/permissions granularity is V1, not OOS (#6744)
## Thinking Path

> - `doc/SPEC-implementation.md` §5.2 (Out of Scope V1) conflates two
distinct concerns into a single bullet: _"Multi-board governance or
role-based human permission granularity"_.
> - Role-based human permission granularity has been V1 for a while —
the `humans-and-permissions` plan and the `principal_permission_grants`
table shipped, the `PERMISSION_KEYS` set covers `users:invite`,
`users:manage_permissions`, `tasks:assign`, `tasks:assign_scope`,
`tasks:manage_active_checkouts`, `tasks:view_all`, `agents:view_all`,
`joins:approve`, `agents:create`, `environments:manage`.
> - The remaining OOS item from that bullet is _multi-board governance_
— running multiple board UIs against one company. That's a
deployment-topology concern, separate from permission granularity, and
stays V1 OOS.
> - This PR splits the bullet so the OOS list reflects reality and
contributors don't read the SPEC and conclude that per-user permission
scoping is unplanned.

## What Changed

Single-file docs edit in `doc/SPEC-implementation.md` §5.2:

- Drop the conflated "Multi-board governance or role-based human
permission granularity" bullet.
- Keep "Multi-board governance (multiple board UIs for a single
company)" as OOS — that part is still out of scope.
- Add a short paragraph below the OOS list pointing readers to the
`humans-and-permissions` plan, `principal_permission_grants`, and the
existing `tasks:view_all` + `agents:view_all` opt-out scoping primitives
so anyone reading §5.2 finds the V1 surface immediately.

## Verification

- N/A — docs-only change, no code/schema/test impact.

## Risks

- None. Single bullet rewording.

## Model Used

Claude (Anthropic). Model ID: `claude-opus-4-7`.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work — it documents already-shipped V1 work that the SPEC
was lagging on
- [x] I have run tests locally and they pass — N/A docs-only
- [x] I have added or updated tests where applicable — N/A
- [x] If this change affects the UI, I have included before/after
screenshots — N/A docs-only
- [x] I have updated relevant documentation to reflect my changes — this
PR IS the doc update
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Mike <ms@moar.tools>
Co-authored-by: Andrew Aymeloglu <aaymeloglu@gmail.com>
canary/v2026.706.0-canary.8
2026-07-06 17:07:47 -05:00
DottaandPaperclip d2e3f7dce5 fix(db): correct 0130 responsible-user backfill in place (inbox resurface) (#9111)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Users triage agent work through the issue inbox, which suppresses
archived issues by comparing issue `updated_at` against the archive
timestamp
> - Migration `0130_run_responsible_user_invariant` backfilled
responsible-user columns but also set `updated_at = now()` on every row
it touched (companies, issues, routines, routine_runs, heartbeat_runs)
> - That blanket timestamp bump made every archived issue look newly
updated, resurfacing thousands of archived issues into every user's
inbox
> - This pull request corrects the 0130 backfill in place so it only
fills `NULL` responsible-user columns and never touches timestamps, and
adds tests that prevent this class of bug from being reintroduced
> - The benefit is that inbox archive suppression stays intact across
migrations, and no future migration backfill can silently bump
`updated_at` on user-visible tables

## Linked Issues or Issue Description

**Bug description (no public issue exists):**

- **What happened:** after upgrading a dev instance across migration
0130, every previously archived inbox item resurfaced as unread/new for
all users.
- **Expected:** data backfills must not alter row modification
timestamps; archived issues stay archived unless genuinely updated.
- **Root cause:** the 0130 backfill's `UPDATE` statements set
`updated_at = now()` alongside the responsible-user columns.

## What Changed

- `packages/db/src/migrations/0130_run_responsible_user_invariant.sql`:
removed all `updated_at = now()` assignments from the backfill UPDATEs;
the migration now only fills `NULL` responsible-user columns. The file
is corrected **in place** (no new migration number, journal untouched)
because 0130 has never shipped in a published release.
- `packages/db/src/client.test.ts`: added a guard test that scans every
migration and rejects backfills that bump `updated_at` on user-visible
tables (with an explicit allowlist for the pre-existing 0131 repair
migration).
- `packages/db/src/client.test.ts`: added a replay test that simulates
an already-migrated database picking up the corrected file (deletes the
0130 ledger hash, re-applies mid-journal) and asserts issue `updated_at`
and inbox-archive suppression ordering are untouched.

### Why an in-place edit is safe

- 0130 only exists on master/canary builds; the latest published release
(v2026.626.0) predates it.
- The migration ledger is content-hash based: databases that already
applied the old 0130 keep an orphaned hash row (harmless) and see the
corrected file as pending, so they replay the corrected backfill — which
is idempotent (fills `NULL`s only, no timestamp writes).
- Fresh databases simply run the corrected 0130 in journal order.

## Verification

- `pnpm --filter @paperclipai/db run check:migrations` — clean
- `cd packages/db && npx vitest run src/client.test.ts` — 11/11 passing
against embedded Postgres, including the new guard and mid-journal
replay tests

## Risks

- Migration safety: the corrected backfill is idempotent and only writes
`NULL` columns; replay on already-migrated databases is exercised
directly by the new test. No schema changes.
- Databases that already ran the old 0130 keep the bumped timestamps
from that run; repairing historical damage is intentionally out of scope
here (no released build ever contained the bug).

## Model Used

- Claude Opus 4.7 (`claude-opus-4-7`, extended thinking, tool use) via
Claude Code / Paperclip agent runtime

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above (backup health alert work split into #9113; no other related
open PRs)
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes (none
needed for a migration content fix)
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
canary/v2026.706.0-canary.7
2026-07-06 16:56:30 -05:00
DottaandPaperclip bded6ac5c7 [codex] Polish operator issue workflow UI (#9091)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The board UI is where operators create issues, inspect issue-thread
decisions, write markdown, and move between issue workflow surfaces.
> - A broad recovered branch mixed these operator workflow polish fixes
with unrelated backend, pipeline, plugin, eval, and work-product
changes.
> - Reviewers need the operator UI workflow fixes in a small PR that can
be understood without pulling in the rest of that recovery branch.
> - This pull request extracts only the issue workflow UI slice:
interaction cards, markdown editing fallback behavior, create-issue work
mode shortcuts, file-viewer URL handling, and issue navigation scroll
behavior.
> - The benefit is a lower-risk review path for operator workflow fixes
while keeping unrelated execution-workspace and server work out of this
PR.

## Linked Issues or Issue Description

- Refs #8866, the closed broad source PR that this focused slice was
extracted from.
- Related: #8228 is an open UI polish PR, but its file list does not
overlap this branch.
- Related: #4090 is older merged operator workflow polish context.

No public GitHub issue exists for this exact extracted slice. The
problem is that several small operator issue-workflow fixes were bundled
inside a broad recovery branch, making them hard to review and ship
independently.

## What Changed

- Removed interaction continuation wake-policy labels from issue-thread
interaction card headers and updated the card test/story copy
accordingly.
- Added a markdown editor error boundary so rich editor render crashes
fall back to a raw textarea instead of breaking the compose surface.
- Made the create-issue work-mode shortcut accept ctrl-period and iOS
hardware-keyboard command-period-as-Escape behavior without dismissing
the dialog.
- Fixed file-viewer URL navigation to compare against the live browser
search string when router state is stale.
- Restored scroll reset when navigating from an issue detail route back
to the issue index, while preserving browser-history restoration
behavior.

## Screenshots

Before removing the continuation wake-policy badge from interaction card
headers:

![Before: issue interaction card header with wake-policy
badge](https://gist.githubusercontent.com/cryppadotta/3e1030e3b379ffbbbcec4074d6cce4fa/raw/9bf44ee2bfea3a9930a68883f7f5ed2200613a51/issue-interaction-card-before.svg)

After removing the wake-policy badge:

![After: issue interaction card header without wake-policy
badge](https://gist.githubusercontent.com/cryppadotta/3e1030e3b379ffbbbcec4074d6cce4fa/raw/fa43b83f657833841e0e790bd851e4f57d4ded8e/issue-interaction-card-after.svg)

## Verification

- `pnpm exec vitest run
ui/src/components/IssueThreadInteractionCard.test.tsx
ui/src/components/MarkdownEditor.test.tsx
ui/src/components/NewIssueDialog.test.tsx
ui/src/context/FileViewerContext.test.ts
ui/src/lib/navigation-scroll.test.ts` — 5 files, 102 tests passed.
- `pnpm --filter @paperclipai/ui typecheck` — passed.
- `git diff --check` — passed.

## Risks

Low risk. The PR is limited to UI workflow components/helpers and their
tests. Main behavioral risks are keyboard shortcut edge cases across
browsers and fallback editor rendering, both covered by focused tests.

## Model Used

OpenAI Codex, GPT-5-based coding agent (`gpt-5` family; exact served
variant and context window are not exposed in this runtime), with
terminal, Git, GitHub, and test execution tools.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-06 16:34:57 -05:00
DottaandPaperclip ef617bee5c [codex] Enforce backend execution release gates (#9089)
## Thinking Path

> - Paperclip is the open source control plane people use to manage AI
agents for work.
> - Backend execution safety is part of the control plane contract:
agents must stop at budget hard limits, stale execution paths must not
create duplicate live work, and checkout ownership must remain
authoritative.
> - The recovery branch bundled these release-gate checks with broader
unrelated work.
> - Reviewers need a narrow PR that isolates only the backend safety
behavior and regression coverage.
> - This pull request keeps budget incident creation idempotent so
repeated evaluation does not duplicate release-gate telemetry or
approvals.
> - It also adds focused coverage for idle timer skips, stale queued-run
behavior, and live checkout conflict preservation.
> - The benefit is a smaller, reviewable release-gate slice for budget
hard stops, stale execution recovery, and ownership-safe issue mutation.

## Linked Issues or Issue Description

Refs #8866

This PR extracts a focused backend safety slice from the closed broad
recovery PR. The underlying problem is that release-gate behavior needs
direct regression coverage before review: budget hard stops should not
duplicate incidents/logging on repeated evaluation, timer wakes should
respect the no-actionable-work skip policy, stale queued runs should
remain invalidated, and active checkout ownership must survive
conflicting checkout attempts without side effects.

## What Changed

- Made budget incident creation report whether an incident was newly
created, so soft/hard threshold activity logs are emitted once per
incident window.
- Added embedded Postgres budget release-gate tests covering soft
incident idempotency, hard-stop pause/cancel behavior, budget override
resume behavior, and telemetry redaction.
- Added heartbeat coverage for skipping generic timer wakes when the
agent opts into `skipTimerWhenNoActionableWork`, while preserving
legacy/proactive timer behavior.
- Added stale execution lock route coverage proving a conflicting
checkout returns `409` without overwriting live checkout or execution
ownership and without writing checkout activity.

## Verification

- `./node_modules/.bin/vitest run
server/src/__tests__/budgets-service.test.ts
server/src/__tests__/heartbeat-process-recovery.test.ts
server/src/__tests__/heartbeat-stale-queue-invalidation.test.ts
server/src/__tests__/issue-stale-execution-lock-routes.test.ts
--no-file-parallelism --maxWorkers=1`
- First run: 3 files passed, 98 tests passed;
`issue-stale-execution-lock-routes.test.ts` failed during import because
the isolated worktree initially lacked dev dependency links for
`supertest`.
- `CI=true NODE_ENV=development pnpm install --frozen-lockfile
--ignore-scripts`
- Recreated worktree dev dependency links; emitted unrelated plugin SDK
bin warnings because plugin SDK dist files were not built under
`--ignore-scripts`.
- `./node_modules/.bin/vitest run
server/src/__tests__/issue-stale-execution-lock-routes.test.ts
--no-file-parallelism --maxWorkers=1`
  - Passed: 1 file, 7 tests.
- `git diff --check`
  - Passed.

## Risks

Low to medium risk. The production code change is intentionally small
and only suppresses duplicate threshold activity logging for
already-open budget incidents, but it affects budget release-gate
observability. The new tests use embedded Postgres and should catch
regressions in budget hard stops, timer wake gating, stale queue
invalidation, and checkout conflict preservation.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

OpenAI Codex, GPT-5 coding agent, tool-use enabled.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-06 16:33:36 -05:00
DottaandPaperclip dfc256a543 [codex] Add heartbeat policy eval coverage (#9087)
## Thinking Path

> - Paperclip is the open source control plane people use to manage AI
agents for work.
> - The relevant subsystem is the agent heartbeat policy surface: the
Paperclip skill, default onboarding AGENTS.md, new-agent runtime
defaults, and promptfoo eval coverage for agent behavior.
> - A broad recovery PR collected several unrelated local-mainline
changes, which made review too large and mixed policy/eval updates with
server execution and UI work.
> - This PR extracts only the heartbeat policy and prompt-eval slice so
reviewers can assess the behavior contract independently.
> - The eval additions cover scoped wake handling, idle no-op behavior,
dependency-blocked comment triage, final disposition, budget hard stops,
and Phase 5 memory/control-surface policy expectations.
> - The benefit is a narrower review surface plus deterministic
follow-up guidance for server/shared tests that should back these
prompt-level checks.

## Linked Issues or Issue Description

Refs #8866

No public issue was filed for this split. This is a focused extraction
from the closed broad recovery PR so heartbeat policy and eval coverage
can be reviewed separately from execution behavior, work-product feature
work, plugin hardening, pipeline health, and unrelated UI polish.

## What Changed

- Added promptfoo release-gate cases for scoped wake payload handling,
idle exits, dependency-blocked comment triage, final disposition, and
budget hard-stop behavior.
- Added Phase 5 memory/control-surface prompt eval cases for provider
binding precedence, provenance/audit fields, hook cost/trust handling,
and auditable board command surfaces.
- Documented how these prompt evals map to deterministic server/shared
follow-up coverage.
- Updated agent policy guidance so operator-facing engineering outputs
such as PRs, branches, commits, previews, and runtime services get
matching work products.
- Defaulted new agent runtime config to skip timer heartbeats when there
is no actionable work, with focused test coverage.

## Verification

- `cd evals/promptfoo && npx promptfoo@latest validate -c
promptfooconfig.yaml` passes.
- `/srv/paperclip/home/paperclipai/paperclip/node_modules/.bin/vitest
run ui/src/lib/new-agent-runtime-config.test.ts` passes in an isolated
worktree after `pnpm install --ignore-scripts --frozen-lockfile` created
workspace links.
- A live promptfoo eval was not run because `OPENROUTER_API_KEY`,
`OPENAI_API_KEY`, and `ANTHROPIC_API_KEY` were unset in the workspace.

## Risks

Low-to-medium risk. The runtime default reduces timer-driven empty
heartbeats for newly created agents, so the main behavioral risk is
missing an edge case where timer wakes were expected despite no
actionable work. The promptfoo additions are deterministic assertion
coverage and documentation-only until a live eval is run with provider
credentials.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

OpenAI GPT-5-based Codex coding agent in the Paperclip local Codex
adapter environment; exact hosted model ID and context window were not
exposed to the agent runtime. Tool use included shell, git, promptfoo
validation, Vitest, and the GitHub connector/CLI.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
canary/v2026.706.0-canary.6
2026-07-06 16:31:14 -05:00
scotttongandClaude Fable 5 4b3f087d7f refactor(ui): extract font-size and letter-spacing to tokens (Phase 2 batch 2/4)
Replaces hardcoded TYPE values in ui/src/components/** and ui/src/pages/**
with references to new verbatim CSS custom-property tokens in
ui/src/index.css, via a new committed codemod (scripts/codemod-extract-type.mjs).

- 932 sites rewritten across 143 files:
  - 728 arbitrary font-size Tailwind classes (text-[Npx])
  - 202 arbitrary letter-spacing classes (tracking-[N em])
  - 2 inline-style fontSize string literals
  - 0 leading-[...] sites found (none existed)
- 17 new tokens minted, no normalizing: 8 --fs-* (9/10/11/12/13/14/15px +
  0.7rem, kept in its own unit) and 9 --ls-* (0.08-0.24em, 9 distinct
  values) — the micro type-size and letter-spacing clusters TOKEN-AUDIT.md
  flagged are now materialized as tokens, still un-collapsed pending a
  human scale decision.
- 2 sites allowlisted (both already-documented functional/third-party
  fontSize forms: CompanyEnvironments.tsx xterm.js config, CompanySkills.tsx
  computed Math.round() value) — no new allowlist entries needed since
  neither is a class-string or literal-fontSize site the codemod targets.
- Verified: rg gates clean, pnpm build-storybook exit 0, Storybook visual
  suite 510/510 passed (first attempt), pnpm typecheck exit 0, codemod
  re-run confirmed idempotent (0 sites on second pass).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-06 14:29:51 -07:00
scotttongandClaude Fable 5 a9399a4d21 refactor(ui): extract color literals to tokens (Phase 2 batch 1/4)
Mechanical, codemod-driven extraction of hardcoded hex/rgb/rgba color
literals in ui/src/components/** and ui/src/pages/** (including their
*.test.tsx companions) into CSS custom-property tokens in
ui/src/index.css, per DESIGN.md's Phase 2 extraction contract. Zero
visual change: verified against the Phase 0 Storybook snapshot
baseline.

- 69 sites rewritten across 31 files (Tailwind bracket hex classes,
  inline style={{ backgroundColor/color: ... }} literals, and
  bg-[gradient(...)] arbitrary values).
- 41 new tokens minted verbatim in a new non-@theme :root block
  (17 --hex-*, 24 --gradient-extract-*), 2 existing-token reuses
  (--status-task-in_progress, --status-task-done — exact
  case-insensitive match, mode-independent, no .dark override).
- 8 files allowlisted with inline `token-extraction: allowlisted`
  comments for functional/third-party literals that must stay
  hardcoded (xterm.js theme config, <input type="color"> value,
  color-picker seed state persisted to a create payload, a
  persisted/compared skill.color palette, a contrast-math fallback,
  a runtime-computed canvas fillStyle, and a half-migrated
  var(--x, fallback) pattern left for a human decision).
- Codemod script (scripts/codemod-extract-colors.mjs) uses a fixed,
  hand-audited site table rather than a blind hex regex, since a
  naive regex false-positives on strings like "acme/web#241".
- Bug caught by the visual suite and fixed before commit: gradient
  token values initially kept Tailwind's bracket-arbitrary-value
  underscore-for-space escaping (e.g. circle_at_top), which is
  invalid inside a real CSS custom property; converted back to
  literal spaces.

Verify: rg gate clean outside the allowlist; pnpm build-storybook
exit 0; Storybook visual snapshot suite 510/510 passed; pnpm
typecheck exit 0.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-06 14:17:05 -07:00
scotttongandClaude Fable 5 38532283e9 docs: Phase 1 audit — TOKEN-AUDIT.md + COMPONENT-INVENTORY.md
Read-only audit of ui/src (token-auditor):
- TOKEN-AUDIT.md: every hardcoded color/spacing/radius/type/shadow value,
  frequencies, locations, near-duplicate clusters, exact-match cross-ref
  against ui/src/index.css tokens (only 6 exact hex matches, all in
  lib/status-colors.ts — confirms PRIOR-ART), DESIGN.md conflicts
  (radius lg/xl pinned to 0px making the scale non-monotonic; no shadow
  tokens exist), and a Needs-human-decision list (incl. the 3,115
  Tailwind palette-class sites scope question).
- COMPONENT-INVENTORY.md: 24 primitives (in sync with shadcn registry),
  206 feature components, 73 pages, verified duplicate leads, shadcn
  candidates — all consolidation/swap items recommendations-only.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-06 13:50:13 -07:00
scotttongandClaude Fable 5 1448946b7f test: Phase 0 visual snapshot baseline (510 screenshots)
Baseline for the zero-visual-change token extraction: every Storybook
story (255) in dark and light themes, captured BEFORE any component
change. All 510 pass against this baseline (verified same-build).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-06 13:48:29 -07:00
scotttongandClaude Fable 5 b0a5872ec6 test: Storybook visual snapshot suite (Phase 0 tooling)
Playwright-based screenshot suite over the built Storybook: one test per
story per theme (dark/light), byte-identical comparison (maxDiffPixels 0),
Date frozen via init-script shim (page.clock broke React rendering in
several stories), animations disabled, per-story settle map for delayed
state flips and a mask for one bimodal ::highlight race.

Run with pnpm test:storybook-visual (or :update to re-baseline).
No new dependencies: reuses the repo's @playwright/test and a
dependency-free static server script.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-06 13:48:28 -07:00
scotttongandClaude Fable 5 29dadead61 storybook: primitive coverage stories + deterministic-render fixes
- Add minimal static stories for the 10 ui/ primitives no existing story
  rendered (alert-dialog, avatar, breadcrumb, collapsible, command,
  dropdown-menu, radio-card, scroll-area, sheet, skeleton) so the visual
  snapshot baseline covers every shared primitive.
- user-secrets: drop the story-level nested MemoryRouter (preview already
  provides one; nesting intermittently threw 'Router inside another Router').
- navigation-layout: provide PluginLauncherProvider at the meta level;
  BoardChromeMatrix mounts the real Sidebar whose PluginLauncherOutlet
  raced company selection and intermittently threw.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-06 13:48:17 -07:00
scotttongandClaude Fable 5 1aea0c8a7e Condense /goal paste block under the 4000-char limit (v3)
/goal rejected the v2 block at 4,648 chars. Block now carries mission +
DONE-WHEN + guardrails; full phase spec moved to a section the run
reads from disk.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-06 13:06:39 -07:00
scotttongandClaude Fable 5 0b09f72bdf Add design-simplification anchor docs and subagents
DESIGN.md v0.3 (token source = ui/src/index.css, scoped Run 1 gates),
GOAL-PROMPT.md v2 (phases 0-2 only, consolidation/rename split out),
PRIOR-ART.md (PAP-280 audit findings), KNOWN-DUPLICATES.md seed,
.claude/agents/{token-auditor,codemod-runner}.md, AGENTS.md link.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-06 12:59:26 -07:00
DottaandPaperclip 903886bc79 [codex] Add starred resource sidebar controls (#9085)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The board UI is the main daily navigation surface for agents,
projects, and their related resources.
> - Operators need a lightweight way to keep frequently used agents and
projects close without changing company-wide ordering or ownership.
> - Resource memberships already model per-user relationships to
projects and agents, so they are the right place to store user-specific
starred state.
> - This pull request extends that membership contract with a starred
timestamp and exposes star controls in list/detail views.
> - The sidebar then uses those starred memberships to show compact,
user-specific shortcuts.
> - The benefit is faster navigation without introducing a separate
favorites system or leaking preferences across users.

## Linked Issues or Issue Description

No public GitHub issue exists.

Feature request:

## Problem or motivation

Users cannot pin frequently used agents or projects into the main
sidebar. Returning to important resources requires scanning full
project/agent lists or navigating through detail pages, which adds
friction to repeated daily workflows.

## Proposed solution

Store a per-user `starred_at` timestamp on agent and project
memberships, expose API actions to set or clear that state, add star
toggle controls to list/detail pages, and render starred projects and
agents as compact sidebar shortcuts.

## Alternatives considered

A separate favorites table would work, but it would duplicate membership
scoping and require another resource relationship model. Keeping starred
state on memberships preserves existing company/user boundaries and
avoids a second source of truth.

## Roadmap alignment

Checked `ROADMAP.md`; no overlapping planned core work for starred
resource/sidebar navigation was found.

## Additional context

The affected subsystems are `packages/db`, `packages/shared`, `server/`,
and `ui/`. The migration is idempotent with `IF NOT EXISTS` guards so
environments that saw an earlier local migration name can still apply
the final ordered migration safely.

## What Changed

- Added idempotent migration `0133_resource_membership_stars` for
`starred_at` columns and lookup indexes on agent/project memberships.
- Extended shared resource membership types and validators with starred
metadata and actions.
- Updated server resource membership services/routes to read and mutate
starred resource state.
- Added reusable star toggle UI and resource membership hook support for
starred state.
- Added starred projects and agents sidebar rendering, plus star
controls on list and detail pages.
- Added focused shared, server, and UI coverage for starred membership
behavior and sidebar rendering.

## Verification

- Rebased and force-with-lease pushed current PR head
`a086fc965391c9e50a51b5b83b5b44a797b2a6f4` onto current
`paperclipai/paperclip:master`; `gh pr view` reports `MERGEABLE` with no
merge conflicts. GitHub checks are green for this fresh head.
- `pnpm exec vitest run packages/shared/src/resource-memberships.test.ts
server/src/__tests__/resource-memberships-routes.test.ts
server/src/__tests__/workspace-runtime.test.ts
ui/src/components/Sidebar.test.tsx
ui/src/components/SidebarAgents.test.tsx
ui/src/components/SidebarStarredProjects.test.tsx
ui/src/components/StarToggle.test.tsx
ui/src/pages/InstanceExperimentalSettings.test.tsx` passed after the
rebase: 8 files, 143 tests.
- Greptile re-review is 5/5; the remaining screenshot thread was
resolved as non-blocking because this task explicitly requested no
screenshots/images in the PR.
- `pnpm exec vitest run
ui/src/components/SidebarStarredProjects.test.tsx` passed after the
mobile pending-spinner fix.
- `pnpm exec vitest run packages/shared/src/resource-memberships.test.ts
server/src/__tests__/resource-memberships-routes.test.ts
ui/src/components/Sidebar.test.tsx
ui/src/components/SidebarAgents.test.tsx
ui/src/components/SidebarStarredProjects.test.tsx
ui/src/components/StarToggle.test.tsx
ui/src/pages/InstanceExperimentalSettings.test.tsx` passed: 7 files, 68
tests.
- `pnpm --filter @paperclipai/db typecheck && pnpm --filter
@paperclipai/shared typecheck && pnpm --filter @paperclipai/server
typecheck && pnpm --filter @paperclipai/ui typecheck` passed
db/shared/server, then failed in pre-existing UI code outside this PR:
`src/pages/CompanyEnvironments.tsx` missing `@xterm/*` type declarations
and `previous` possibly null.
- Checked that the PR diff does not include `pnpm-lock.yaml` or
`.github/workflows` changes.
- Checked `ROADMAP.md` and found no overlapping planned core work for
starred resource/sidebar navigation.
- Searched existing GitHub PRs for duplicate starred-resource/sidebar
work and found none.

## Risks

- Migration touches membership tables. The SQL uses `IF NOT EXISTS` for
columns and indexes so environments that saw an earlier local migration
name can still apply this safely.
- Sidebar ordering and visibility changes could affect users who rely on
the previous flat sidebar layout.
- Starred state is per-user membership metadata; code paths must
continue preserving company/user scoping around memberships.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

OpenAI GPT-5 Codex, tool-enabled coding agent with shell/GitHub access.
Context window not disclosed by the runtime.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-06 14:09:11 -05:00
neerajdad123-byte 70c86d2c73 fix(hermes): strip ANSI escape codes from terminal output in UI parsers (#8731)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Hermes adapter produces terminal output with ANSI color codes on
stdout
> - These escape sequences flow through the UI parsers untouched and
render as raw garbage text
> - This PR adds ANSI stripping at the entry point of all four Hermes
parse-stdout entry points
   > - The same regex is already proven in claude-local adapter
   > - The benefit is clean, readable terminal output for Hermes agents

   ## Linked Issues or Issue Description

   No existing issue. This is a bug report:

   **What happened**

Hermes terminal output displayed ANSI color codes as raw text in the
Paperclip UI, making agent output unreadable.

   **Expected behavior**

Terminal output in run transcripts should be clean text without
invisible control characters.

   **Steps to reproduce**

   1. Connect a Hermes agent to Paperclip
   2. Create and assign a task to the agent
   3. View the run transcript — ANSI escape codes appear as raw garbage

   **Paperclip version or commit**

   e6407b322 (upstream master)

   **Deployment mode**

   local_trusted

   ## What Changed

- Added `stripAnsi()` function using the same regex pattern from
claude-local adapter (quota.ts) — strips CSI and
 OSC sequences
- Applied at entry point of `parseHermesStdoutLine` in hermes_local (TS
+ CJS)
- Applied at entry point of `parseHermesGatewayStdoutLine` in
hermes_gateway (TS + CJS)
- CJS files keep the function inline since the dynamic parser sandbox
has no module loader
   - 5 files changed, +123/-8 lines

   ## Verification

- Smoke tested with real ANSI patterns from Hermes output — all samples
pass
- `pnpm --filter @paperclipai/hermes-paperclip-adapter exec vitest run
src/ui/parse-stdout.test.ts` — 9 passed
- TypeScript compiles clean for both hermes and hermes-gateway packages
- Adapter tests pass (5/6, 1 pre-existing Windows CI failure unrelated)
- Live tested on running Paperclip instance — ANSI codes no longer
appear in transcripts

   ## Risks

Low risk. Only affects Hermes parser output. Regex already proven in
claude-local adapter. No logic changes to parse
 behavior — only strips invisible control characters before parsing.

   ## Model Used

   DeepSeek V4 Pro — reasoning mode, tool use

   ## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue
 in-PR following the relevant issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` /
 `github.com/paperclipai/paperclip` URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id
 or instance-derived details
   - [x] I have run tests locally and they pass
   - [x] I have added or updated tests where applicable
   - [ ] I have updated relevant documentation to reflect my changes
   - [x] I have considered and documented any risks above
   - [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge
2026-07-06 12:07:55 -07:00
Nicky LeachandPaperclip c5e03c6d01 fix(db): relocate slow 0126 issue-comment attribution backfill to fast idempotent 0132 (#9108)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - The database layer runs migrations during server startup via
`server.listen`; migrations that block this path delay instance
availability
> - Migration `0126_issue_comment_derived_attribution.sql` backfills
derived attribution columns on `issue_comments` using a LIMIT-5000 loop
with no index or keyset cursor — it re-scans the full table from the
start each batch, giving O(n²) complexity
> - On instances with millions of issue comments this blocked
`server.listen` for ~5 minutes during upgrade, causing CPU pegs and
unavailability
> - Editing 0126 in place is unsafe: the migration runner keys its
applied-set on file **content hash**, so any edit changes the hash,
causing the runner to re-apply the migration on already-migrated
databases and blocking startup
> - The safe remedy is delete-and-relocate: remove 0126 and add a new
forward migration 0132 that uses a temporary partial index + keyset
pagination (`id > last_comment_id ORDER BY id LIMIT 5000`) so every row
is visited exactly once — O(n)
> - This pull request implements that delete-and-relocate with
idempotency guards (IF NOT EXISTS DDL, backfill WHERE clause that skips
already-attributed rows) so it is a safe near-noop on already-migrated,
partially-migrated, and fresh databases alike

## Linked Issues or Issue Description

No pre-existing public GitHub issue. Inline bug report:

**What happened?**

The `0126_issue_comment_derived_attribution` migration runs during
server startup and uses a LIMIT-5000 batch loop that re-scans
`issue_comments` from row 1 each iteration (no index, no keyset cursor).
The result is O(n²) I/O that blocked `server.listen` on large instances.

**Expected behavior**

Backfill migrations should advance with a keyset cursor so each batch
reads a new slice; total work is O(n) and startup is not blocked.

**Steps to reproduce**

Run a Paperclip upgrade on an instance with ≥200k issue comments;
observe `server.listen` blocked for several minutes and CPU peg during
migration.

**Paperclip version or commit**

Reproduced on the current `master` branch prior to this fix.

**Deployment mode**

All deployment modes that run the migration runner at startup.

## What Changed

- **Deleted**
`packages/db/src/migrations/0126_issue_comment_derived_attribution.sql`
— the O(n²) LIMIT-5000 loop with no index/cursor
- **Added**
`packages/db/src/migrations/0132_issue_comment_derived_attribution_fast.sql`:
- Creates a temporary partial index over the eligible predicate before
backfilling
- Uses keyset pagination (`id > last_comment_id ORDER BY id LIMIT 5000`)
— each batch advances to the batch-max id, so every row is visited once
  - Drops the temporary index at the end
- Columns/FKs guarded with `IF NOT EXISTS`; Option-A timing-tier cleanup
preserved; human-authored comments never touched
- `WHERE` clause in the backfill excludes rows already attributed (safe
near-noop on already-migrated DBs)
- **Updated** `packages/db/src/migrations/meta/_journal.json` — dropped
0126 entry, appended 0132
- **Added**
`packages/db/src/issue-comment-derived-attribution-migration.test.ts`
(345 lines) — covers fresh-install, already-0126-migrated idempotency,
and partial-backfill completion scenarios using embedded Postgres

## Verification

```bash
# Migration numbering guard
pnpm --filter @paperclipai/db check:migrations

# Migration tests (embedded Postgres, 3 scenarios)
pnpm --filter @paperclipai/db vitest run issue-comment-derived-attribution-migration.test.ts
```

Both pass locally. CI results will appear on this PR.

## Risks

**Migration safety — already-migrated databases:** Deleting 0126 leaves
an orphan row in the runner's applied-set. The runner only checks the
set for "has this been applied" — orphan rows are never re-applied. 0132
runs as a near-noop: IF NOT EXISTS DDL is skipped, and the backfill
WHERE clause excludes rows that already have attribution.

**Migration safety — partially-migrated databases:** Keyset pagination
is idempotent. 0132 picks up from the highest attributed row id, so a
partial prior run is completed correctly.

**No data loss:** The migration never deletes or overwrites
user-authored content. It only writes to derived attribution columns on
rows where attribution is absent.

**Rollback:** 0132 is a forward-only migration. If a rollback is needed,
the attribution columns remain (no harm) and can be ignored or cleaned
up in a subsequent migration.

## Model Used

Claude Sonnet 4.6 (`claude-sonnet-4-6`) via the Paperclip AI agent
harness, with tool use and extended context enabled. Implementation
authored by Priya Raman; PR opened via the Paperclip Git Expert agent.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [ ] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
_(branch is the preserved implementation branch from the authoring
engineer; the internal task id is present in the branch name by workflow
convention — not a content risk)_
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green _(pending — CI running)_
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
_(pending — will be driven to terminal-green before merge)_
- [ ] I will address all Greptile and reviewer comments before
requesting merge _(pending — will action all findings)_

Co-authored-by: Paperclip <noreply@paperclip.ing>
canary/v2026.706.0-canary.5
2026-07-06 11:41:24 -07:00
DottaandPaperclip 1e81bd188b Fix heartbeat run responsible user migration for identifier refs (#9107)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Paperclip stores heartbeat run ownership context so operators can
audit which user was responsible for agent work
> - A migration backfills missing heartbeat run `responsible_user_id`
values from issue references in each run's context snapshot
> - Some context snapshots can store issue identifiers as public ticket
strings rather than UUIDs
> - The migration needs to resolve both UUID issue ids and issue
identifiers without trying to cast identifier strings to UUID
> - This pull request tightens the migration query so UUID matching only
casts validated UUID-shaped values and identifier matching remains a
separate fallback
> - A companion repair migration is needed so installations that already
recorded `0130` still get the corrected heartbeat-run backfill
> - The benefit is that existing installations can apply the
responsible-user invariant migrations without failing on non-UUID issue
references and without leaving already-migrated databases unrepaired

## Linked Issues or Issue Description

No public GitHub issue was found in a quick search for this migration
failure.

Bug report context following `.github/ISSUE_TEMPLATE/bug_report.yml`:

**Pre-submission checklist**

- I searched existing open and closed issues and did not find a
duplicate.
- I can reproduce against current `master` plus the responsible-user
invariant migration path.
- The error originates in Paperclip's database migration, not in an
adapter, API provider, or local configuration.

**What happened?**

Applying the heartbeat run responsible-user backfill migration could
fail when `heartbeat_runs.context_snapshot->>'issueId'` or `taskId`
contained an issue identifier such as `PAP-123` instead of a UUID. The
migration attempted to use issue refs for UUID matching and identifier
fallback, but the UUID path needed to avoid casting non-UUID identifier
strings. Because `0130` may already have been applied in some
installations, a follow-up repair migration is needed as well.

**Expected behavior**

The migration should backfill from UUID issue ids when present, from
issue identifiers when present, and fall back to the company default
responsible user without unsafe UUID casts. Already-migrated
installations should receive the repaired heartbeat-run context-ref
backfill through a new migration.

**Steps to reproduce**

1. Use a migrated database with a company, issue, agent, and heartbeat
run.
2. Store a null `heartbeat_runs.responsible_user_id` and a
`context_snapshot` like `{"issueId":"PAP-123"}`.
3. Replay/apply the run responsible-user repair migration.
4. Observe that the migration must not cast `PAP-123` to UUID and should
backfill from the matching issue identifier.

**Paperclip version or commit**

Current `master` plus this migration fix branch.

**Deployment mode**

Database migration during server startup or explicit migration command.

**Installation method**

Built from source / self-hosted migration path.

**Agent adapter(s) involved**

Not adapter-specific; core database migration bug.

**Database mode**

Postgres migration path, including embedded Postgres in development.

**Access context**

Not applicable; migration-time data backfill.

**Relevant logs or output**

Unsafe UUID casts can surface as Postgres invalid input syntax errors
when a context snapshot issue ref is an identifier rather than a UUID.

**Privacy checklist**

No private logs, paths, API keys, tokens, company names, or internal
Paperclip issue links are included.

## What Changed

- Split heartbeat run context issue reference extraction into reusable
CTEs.
- Only cast `issueId` / `taskId` values to UUID after a UUID-shape regex
check.
- Preserve fallback matching by issue identifier within the same
company.
- Keep deterministic candidate priority with `issueId` before `taskId`
and UUID matches before identifier matches.
- Added `0131_repair_run_responsible_user_context_refs.sql` so
installations that already applied `0130` still receive the corrected
heartbeat-run backfill.
- Added a DB migration regression test that replays the repair migration
with an identifier-style heartbeat run issue ref.

## Verification

- `pnpm --filter @paperclipai/db typecheck`
- `pnpm --filter @paperclipai/db exec vitest run src/client.test.ts`
- Isolated embedded Postgres migration run with a temporary
`PAPERCLIP_CONFIG`: `pnpm --filter @paperclipai/db migrate` applied all
pending migrations successfully.
- GitHub Actions PR workflow is green on commit
`1c2655bc457cef3716a43e66463e1e5bc2fdcfab`.
- Greptile is 5/5 with no unresolved threads on commit
`1c2655bc457cef3716a43e66463e1e5bc2fdcfab`.
- Searched for duplicate public issues/PRs with GitHub search; no direct
duplicate found.
- Checked `ROADMAP.md` for overlap; no related roadmap item found.

## Risks

- Low-to-medium migration risk because this modifies an existing data
backfill migration and adds a companion repair migration.
- The query still relies on `context_snapshot` containing either issue
UUIDs or identifiers that match issues in the same company.
- Installations with unusual malformed context snapshots now skip unsafe
UUID casts and fall through to identifier/default backfill behavior.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

OpenAI GPT-5 Codex coding agent with tool use and local command
execution.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes, or
confirmed no docs update is needed for this migration-only fix
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
canary/v2026.706.0-canary.4
2026-07-06 13:14:18 -05:00
DottaandPaperclip e936ea3905 [codex] Deduplicate pipeline automation health warnings (#9090)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Pipeline health reports give operators early warnings when a
workflow step cannot run cleanly.
> - Failed stage automation is surfaced as an `automation_failed` health
warning for the affected item.
> - A single item can have repeated failed automation rows for the same
stage, especially after retries or repeated failed attempts.
> - Rendering every matching row creates duplicate warnings that make
the pipeline look noisier than it is.
> - This pull request deduplicates failed automation warnings by the
item/stage pair before adding them to the health report.
> - The benefit is that repeated failures for the same item in the same
stage produce one actionable warning, while distinct items still remain
visible.

## Linked Issues or Issue Description

Refs #8866

Bug: pipeline health could emit duplicate `automation_failed` warnings
when the input contained repeated failed automation rows for the same
live item and stage. Reviewers should expect one warning per
`stageId:caseId` pair, not one warning per backing execution row.

## What Changed

- Deduplicated failed automation warnings with per-stage case tracking
in `computePipelineHealth`, avoiding collision-prone composite string
keys before pushing `automation_failed` warnings.
- Added shared Vitest coverage for a single automation failure,
duplicate same-stage same-item dedupe, separate warnings for different
item IDs in the same stage, the same item ID in different stages, and
colon-delimited ID collision cases.
- Kept pipeline route behavior unchanged; this PR only changes shared
warning rendering and direct shared tests.

## Verification

- `pnpm vitest packages/shared/src/pipeline-health.test.ts`
  - 1 test file passed
  - 5 tests passed

- PR #9090 remote checks on `bbbb2d4627f5be17ca210dedb9edb91edd047df8`
  - All Paperclip CI/status checks passed
- Greptile Confidence Score: 5/5, 0 comments added, 0 unresolved
Greptile threads

No route test changed because this PR does not change the route's
failed-automation query or normalization behavior.

## Risks

Low risk. The change only suppresses duplicate `automation_failed`
warnings when both `stageId` and `caseId` match. Distinct items in the
same stage still produce separate warnings.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

OpenAI Codex, GPT-5 coding agent in the Paperclip local adapter
environment; exact model snapshot and context-window metadata were not
exposed in the runtime. Tool use and code execution were enabled.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
canary/v2026.706.0-canary.3
2026-07-06 12:12:18 -05:00
Nicky LeachandPaperclip 8516700217 fix(server): report source-install version from git metadata (#9103)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - The server reports its own version through `server/src/version.ts`,
which is read by the `/health` endpoint and the telemetry client
> - When running from a cloned source tree, `server/package.json` is
frozen at the last published release version (e.g. `0.3.1`), so the
reported `serverVersion` never reflects how far the local checkout has
drifted from that release
> - Operators and support staff cannot tell from telemetry or health
output whether they are running a tagged release or a development build
with local commits on top
> - A `git describe --tags --match v* --long --dirty` call at startup
gives the exact nearest tag, number of commits since it, the current
SHA, and whether the tree is dirty — all the information needed to
compute a semantically meaningful version
> - This pull request replaces the static `pkg.version` export with a
`resolveServerVersion()` call that parses `git describe` output into
`YYYY.MDD.P+N.git.<sha>` (drift), `YYYY.MDD.P` (clean on-tag), or
appends `.dirty` for a modified tree, with a non-throwing fallback to
`package.json` when git is unavailable
> - The benefit is that from-source installs now report a version string
that lets operators and support quickly identify their exact checkout
state without running additional git commands

## Linked Issues or Issue Description

No pre-existing public issue. Inline description:

**What happened?**

When Paperclip is installed from source (git clone + pnpm), `GET
/health` and the telemetry envelope report the version frozen at the
last published `package.json` value (e.g. `0.3.1`) regardless of how
many commits ahead of that tag the local checkout is.

**Expected behavior**

The reported version should reflect the actual local state — nearest
release tag, number of commits since that tag, abbreviated commit SHA,
and a dirty marker when the working tree has uncommitted changes.

**Steps to reproduce**

Clone the repo, run `pnpm install && pnpm --filter @paperclipai/server
start`, then call `GET /health` or inspect telemetry envelopes. The
`serverVersion` field shows the `package.json` version even when the
checkout is dozens of commits ahead of that tag.

**Paperclip version or commit**

Affects all source-tree installs where `package.json` has not been
updated to match the current HEAD.

**Deployment mode**

Source install (git clone).

## What Changed

- `server/src/version.ts`: extracted `resolveServerVersion()` (replaces
the module-level `const serverVersion`) and `parseGitDescribeVersion()`
(exported for unit testing); the default implementation shells out to
`git describe --tags --match v* --long --dirty` with a 1 500 ms timeout;
falls back to `pkg.version ?? "0.0.0"` without throwing when git is
unavailable or the output cannot be parsed; replaced `logger` import
with a `console.debug`-based default to avoid pulling pino transport
side effects into a zero-dependency utility module
- `server/src/__tests__/version.test.ts`: 7-test unit suite covering
drift, clean on-tag collapse, dirty on-tag edge case, unparseable
fallback, `resolveServerVersion` happy path, and git-unavailable
fallback — all exercised via injected stubs without spawning a real git
process

## Verification

```sh
# Unit tests (7 tests)
pnpm exec vitest run server/src/__tests__/version.test.ts

# Type check
pnpm --filter @paperclipai/server typecheck

# Health and telemetry regression
pnpm exec vitest run server/src/__tests__/health.test.ts server/src/__tests__/telemetry-client-flush.test.ts

# Runtime smoke (from-source checkout)
# git describe --tags --match 'v*' --long  =>  v2026.626.0-58-g518fc71ce
# server startup => serverVersion = 2026.626.0+59.git.3367571cc
```

All commands passed at the committed HEAD.

## Risks

Low. The change is additive and self-contained to
`server/src/version.ts`:

- `git describe` is called once at module load with a 1 500 ms timeout;
failure (non-git environment, git not on PATH, timeout) is silently
caught and falls back to `pkg.version`, preserving existing behavior for
published-package installs
- No API surface, database schema, or migration is touched
- The telemetry envelope already carried `serverVersion`; only the value
changes for source-tree installs

## Model Used

Claude Sonnet 4.6 (`claude-sonnet-4-6`) with tool use and code
execution. Context window: 200 k tokens.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [ ] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [ ] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-06 09:15:44 -07:00
DottaandPaperclip 574b4e71db [codex] Bundle UI webfonts with the app (#9020)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - The browser UI depends on the Inter font family for its intended
visual baseline
> - The app previously referenced remote Google Fonts stylesheets at
runtime
> - That meant self-hosted, offline, or privacy-sensitive deployments
could lose the intended typography or depend on an external request
> - This pull request bundles the required Inter variable font files
with the UI and serves them from the app
> - A normal UI test now covers the static assets and CSS wiring without
adding a package script or build step
> - The benefit is a more reliable, self-contained UI that does not rely
on third-party webfont hosting

## Linked Issues or Issue Description

No public GitHub issue was found for this exact gap.

**Subsystem affected**
ui/ — React + Vite board UI

**Problem or motivation**
Paperclip's UI should ship the webfont assets it references so
production and self-hosted deployments render consistently without
reaching out to Google Fonts at runtime.

**Proposed solution**
Bundle the Inter variable font files under the UI public assets, load
them with local `@font-face` declarations, document the bundled assets,
and cover the source assets/CSS wiring with a normal UI Vitest test.

**Alternatives considered**
Keeping the remote stylesheet dependency is simpler, but leaves
deployments dependent on external font hosting. Using system fonts only
would avoid the asset footprint, but changes the intended UI typography.

**Roadmap alignment**
This is a focused UI reliability/polish fix, not a roadmap-level core
feature.

**Additional context**
Searched public GitHub issues and PRs for `webfonts
repo:paperclipai/paperclip`; no duplicates or closely related open items
were found.

## What Changed

- Added bundled Inter variable font assets and their notice under
`ui/public/fonts/`.
- Replaced remote Google Fonts imports with local `@font-face`
declarations using relative public-asset URLs that remain subpath-safe
from built CSS.
- Documented the local font asset expectation in development and UI spec
docs.
- Removed the follow-up font asset checker scripts and package/build
wiring after review feedback clarified they are not required for
building the UI.
- Added `ui/src/lib/ui-font-assets.test.ts` to verify the shipped WOFF2
files, notice text, and CSS font references through the normal UI test
suite.

## Verification

- `pnpm --filter @paperclipai/ui exec vitest run
src/lib/ui-font-assets.test.ts --config vitest.config.ts`
  - Passed.
- Confirms the bundled font files exist, are WOFF2 files, have notice
coverage, and are referenced by `ui/src/index.css`.
- `pnpm --filter @paperclipai/ui build`
  - Passed.
- Confirmed the UI still builds after removing the checker from
`ui/package.json`.
- Confirmed `ui/dist/fonts/` contains `InterVariable.woff2`,
`InterVariable-Italic.woff2`, and `NOTICE.md` after the build.
- The UI build emitted existing warnings about `::highlight(...)`, a
dynamic/static import overlap for `MarkdownEditor.tsx`, unresolved
relative public font URLs left for runtime resolution, and large chunks,
but completed successfully.

## Risks

Low risk. This adds static font assets and swaps the font source from a
remote stylesheet to same-origin files. The main tradeoff is a larger
repository/UI asset footprint from the bundled `.woff2` files.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

OpenAI Codex, GPT-5-based coding agent, tool-enabled terminal/GitHub
workflow with reasoning support.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
canary/v2026.706.0-canary.2
2026-07-06 11:02:45 -05:00
DottaandPaperclip 518fc71cec [codex] Add work timeline page (#8938)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The board UI is where operators inspect company activity, agent
work, and issue progress.
> - Existing board views show individual issue and run details, but they
do not give operators a compact time-based picture of work across
agents.
> - A work timeline helps operators scan when agents worked, how
handoffs happened, and where overlapping work occurred.
> - This pull request adds a company-scoped Work Timeline page backed by
the existing API surface and renders the timeline as a custom SVG
Gantt-style view.
> - The benefit is faster operator understanding of multi-agent
execution without opening each issue thread individually.

## Linked Issues or Issue Description

No public GitHub issue exists for this change.

Subsystem affected:
- ui/ — React + Vite board UI

Problem or motivation:
- Operators can inspect individual issues and runs, but there is no
compact time-based view of company work across agents.
- This makes it harder to scan overlaps, handoffs, retries, and activity
windows without opening many issue threads.

Proposed solution:
- Add a company-scoped Work Timeline page in the board UI.
- Render agent and system run spans as a custom SVG Gantt-style chart
with packed overlap lanes.
- Show issue color identity, kickoff attribution, hover-revealed
delegation connectors, retry styling, zoom controls, a sticky actor
gutter, and a minimap brush.
- Keep human activity lightweight by showing human kickoff chips without
plotting standalone human event rows.

Alternatives considered:
- Add the same information to existing issue-list or run-list views.
That would preserve simpler UI, but it would not show temporal overlap
or handoff paths clearly.
- Build this as a plugin-only surface. That keeps core smaller, but the
board already has the company-scoped route, navigation, and API client
patterns needed for this operator workflow.

Roadmap alignment:
- `ROADMAP.md` does not list an existing duplicate work-timeline
milestone. This supports the broader operator visibility direction
around artifacts, enforced outcomes, and higher-autonomy execution.

Additional context:
- Storybook includes `Pages/Work Timeline` stories for hour/day zoom and
a human-activity sample so reviewers can inspect the component without a
live backend.

## What Changed

- Added the Work Timeline page, route, sidebar entry, API client, query
key, and company-prefixed route helper coverage.
- Added a pure timeline layout transform for row packing, issue colors,
kickoff attribution, connector calculation, tick selection, and duration
formatting.
- Added the custom SVG timeline chart with sticky actor gutter,
hover-revealed connectors, zoom controls, minimap brushing,
visible-range feedback, and issue navigation.
- Added Storybook coverage plus sample fixtures for the work timeline.
- Added and corrected focused UI tests covering layout, chart behavior,
routing, sidebar behavior, and collapsed-sidebar expectations.
- Addressed Greptile feedback for kickoff fallback ordering, minimap
range math, document drag listener cleanup, and stable default `now`
handling.

## Verification

- `pnpm --filter @paperclipai/ui exec vitest run
src/lib/timeline/layout.test.ts
src/components/timeline/WorkTimelineChart.test.tsx
src/pages/Timeline.test.tsx src/lib/company-routes.test.ts
src/components/Sidebar.test.tsx
src/components/RequestCollapsedSidebar.test.tsx`
- `pnpm --filter @paperclipai/ui typecheck`
- `git merge-tree $(git merge-base HEAD origin/master) HEAD
origin/master | rg -n "<<<<<<<|changed in both|CONFLICT"` returned no
conflicts.
- Attempted Storybook screenshot capture with Playwright; Storybook ran
locally, but Chromium could not launch in this container because native
browser libraries such as `libatk-1.0.so.0` are unavailable and `npx
playwright install-deps chromium` requires interactive sudo.

## Risks

- Medium UI risk: this adds a substantial visual surface with custom SVG
interaction logic, so browser-level review is still useful for
responsive behavior and usability.
- Low backend risk: this PR only adds a UI client/page around the
existing timeline API contract and does not change database schema or
server routes.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

OpenAI GPT-5 via Codex coding agent, with repository file access, shell
command execution, GitHub connector access, and focused test execution.
Exact context-window details are not exposed in this runtime.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
canary/v2026.706.0-canary.1
2026-07-06 07:57:23 -05:00
Nicky LeachandPaperclip 8a058f9d79 fix: deduplicate adapter-agnostic config keys (#9058)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - When you swap an agent's adapter (e.g. from one LLM provider to
another), the server merges the incoming PATCH body with stored config —
keys listed in \`ADAPTER_AGNOSTIC_KEYS\` are preserved regardless of
which adapter is active
> - That constant was defined independently in two places:
\`server/src/agents.ts\` (used by the adapter-swap route) and
\`ui/src/lib/agent-config-patch.ts\` (used by the UI patch builder)
> - PR #8975 fixed the bug where \`paperclipSkillSync.desiredSkills\`
was dropped on adapter swap by adding it to the server-side constant,
but the UI-side copy was not updated in the same PR — creating ongoing
drift risk
> - This pull request hoists \`ADAPTER_AGNOSTIC_KEYS\` into
\`packages/shared\` so both consumers import the same constant
> - The benefit is a single source of truth: any future key addition is
made in one place and both the server route and the UI patch builder
pick it up automatically, with a drift guard to catch any accidental
re-duplication

## Linked Issues or Issue Description

Refs #8975 — follow-up deduplication: #8975 fixed the runtime bug but
left the constant duplicated across server and UI. This PR closes that
gap.

## What Changed

- Added \`ADAPTER_AGNOSTIC_KEYS\` constant and \`AdapterAgnosticKey\`
type to \`packages/shared/src/adapter-agnostic-keys.ts\`
- Updated \`server/src/agents.ts\` to import the shared constant,
removing the local copy
- Updated \`ui/src/lib/agent-config-patch.ts\` to import the shared
constant, removing the local copy
- Added \`packages/shared/src/adapter-agnostic-keys.test.ts\`: drift
guard asserting the expected key set and both consumer import sites

## Verification

\`\`\`bash
pnpm exec vitest run packages/shared/src/adapter-agnostic-keys.test.ts
ui/src/lib/agent-config-patch.test.ts
server/src/__tests__/agent-instructions-routes.test.ts
pnpm --filter @paperclipai/shared typecheck
pnpm --filter @paperclipai/server typecheck
pnpm --filter @paperclipai/ui typecheck
\`\`\`

All 15 tests pass across the three files; all three packages typecheck
clean.

## Risks

Low risk — behavior-preserving refactor. The key set is unchanged; only
the import source changes. The drift guard will fail loudly if someone
accidentally re-introduces a local copy or modifies one without updating
the other.

> For core feature work, check [\`ROADMAP.md\`](ROADMAP.md) first and
discuss it in \`#dev\` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See \`CONTRIBUTING.md\`.

## Model Used

- Provider: Anthropic
- Model: Claude Sonnet 4.6 (\`claude-sonnet-4-6\`)
- Context: standard context window, tool use enabled
- Reasoning: standard mode (no extended thinking)

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with \`Fixes: #\` /
\`Closes #\` / \`Refs #\` OR (b) described the issue in-PR following the
relevant issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub \`#NNN\` /
\`github.com/paperclipai/paperclip\` URLs)
- [ ] My branch name describes the change (e.g. \`docs/...\`,
\`fix/...\`) and contains no internal Paperclip ticket id or
instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [ ] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [ ] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
canary/v2026.706.0-canary.0
2026-07-05 21:47:38 -07:00