## Thinking Path > - Paperclip manages AI agents and their work. > - Pipelines was an unused experiment with its own UI, API, CLI, and automation. > - Keeping it leaves unsupported product surfaces and extra task-detail queries. > - Removing the experiment must preserve data that users already saved. > - This pull request removes the feature and keeps its database schema and migration history. > - Cases and Routines remain available as separate features. ## Linked Issues or Issue Description **What existing behavior does this improve?** Remove the unused Pipelines experiment across the application. **Current behavior** The experiment includes pipeline boards, stage settings, case automation, review queues, learnings, permissions, and CLI commands. Task detail also queries pipeline links. **Proposed behavior** Remove all these product surfaces and their implementation. Preserve existing tables, records, and documents. Ignore the retired boolean in older managed configurations so upgrades still start. **Breaking changes** Pipeline URLs, API endpoints, CLI commands, and `pipelines:write` are removed. Task detail no longer includes the old `linkedCases` field. The independent Cases API remains available. No database migration or cleanup is included. Related feature work: #7907, #9110, #10905, #11375, #13004, #14671, #16133. Related issues: #9663, #10310, #10312. This removal supersedes the feature; it does not implement those pending enhancements or delete their saved data. ## What Changed - Remove Pipeline UI pages, navigation, gates, clients, query keys, helpers, and unused design tokens. - Remove Pipeline REST routes, services, automation dispatch, task-detail queries, and OpenAPI discovery. - Remove the CLI commands, shared contracts, experimental flag, catalog entry, and permission defaults. - Remove feature-specific tests, tutorials, smoke scripts, maps, and Storybook examples. - Preserve database schema, migration history, and the reserved document key used by old records. - Keep Cases routes independent and cover obsolete stored and managed settings. ## Verification - Passed: `pnpm build` and `pnpm -r typecheck`. - Passed: targeted settings, managed configuration, sidebar, settings UI, routing, and feature-catalog tests. A first sidebar run caught a shared Workspaces icon import; the import was restored and the sidebar rerun passed. - Passed: 40 tests covering Cases routes, OpenAPI discovery, retained Pipeline table constraints, and schema snapshot drift. - Passed: token gates, map validation, generated API metadata check, Storybook catalog validation, and 28 map/catalog tests. - Passed: isolated local browser verification of navigation and Experimental settings with Pipelines absent; Cases and Routines still open normally. Live GET/POST requests to retired Pipeline endpoints return 404, and the retired setting is absent. CLI help has no Pipeline commands. - Passed: 22 access-service and agent-default-grant tests after restoring unrelated permission assertions flagged in review. - Local full run: `pnpm test:run` reported one failure in the unchanged workspace-runtime port-allocation test. That test passed in an isolated rerun. The long local run was stopped after full CI passed; it is not reported as a complete local pass. - Passed: all 56 checks on `def9181f3a4491d95fca1d38e9739f5b821aae3e` (2 conditional checks skipped), including build, typecheck, test shards, and browser suites. Eleven interrupted CI jobs reported “The operation was canceled”; their one-time retry passed. [CI run](https://github.com/paperclipai/paperclip/actions/runs/39255211006). - Greptile: 5/5 on the final commit, with the only review finding fixed and resolved. - Sandbox socket restrictions affected the first build/API test attempts. The same commands ran with local sockets available. ## Risks - Existing Pipeline clients must stop using the removed endpoints and commands. - Existing data remains in the database and backups, but the removed UI no longer displays it. - Historical boolean `enablePipelines` values are ignored. They cannot restore the feature. - Cases and Routines must retain their separate behavior. Targeted route tests cover this boundary. ## Model Used OpenAI Codex, GPT-6, with repository inspection, editing, shell execution, and browser verification. The exact deployed model ID and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>
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Agent permission defaults
This document describes the server defaults for an ordinary, standard trust agent. An agent must belong to the same company and be active where the action requires active membership. A responsible user's authority, project or run trust policy, scope rules, and approval gates can narrow these defaults.
Granted by default
| Capability | Source and limit |
|---|---|
| Agent configuration and suggestions | New standard agents receive direct, company-scoped agents:configure and agents:suggest-changes grants. Protected-change and responsible-user checks still apply. |
| Skill changes | New standard agents receive direct skills:create and skills:suggest-changes grants. |
| Tool access and management | New standard agents receive tools:manage_connections, tools:manage_profiles, tools:view_audit, tools:use, and tools:manage_runtime grants. Tool, connection, profile, and runtime policy checks still apply. |
| Audit and inbox | New standard agents receive audit:view_agent_actions and inbox:manage grants. The default inbox grant is limited to the responsible-user path and still follows that user's inbox policy. Cross-user management requires a separately configured grant or the target user's saved consent policy. |
| Task assignment and checkout control | New standard agents receive tasks:assign, tasks:assign_scope, and tasks:manage_active_checkouts grants, subject to company and route checks. The tasks:assign_scope grant covers the new agent's own reporting subtree; an explicit invitation scope is preserved. |
| Agent creation | New standard agents have canCreateAgents: true. This is a legacy authorization path for agents:create, not an agents:create grant row. Stored legacy records without the flag stay closed. |
| Skill creation setting | canCreateSkills: true is the normalized setting. Protected skill configuration changes still require a direct skills:create grant or a consented skills:suggest-changes grant. |
| Same-company visibility and work | Standard agents can read same-company agents, projects, issues, and company scope; read and manage decision queues; read runtime and secret metadata where the route allows it; comment or mutate their own or unassigned issues; and assign tasks under the assignment policy. The route and resource checks still apply. |
| Own configuration and wake | An agent can read its own configuration, update unprotected parts of it, and wake itself. Protected changes still require the relevant grant. |
Not granted by default
These permission keys have no blanket grant for new standard agents: agents:create (the flag above is separate), environments:manage, tools:admin, users:invite, users:manage_permissions, and joins:approve. Existing agents keep their current permissions. The defaults above apply when a new standard agent is created or a pending new hire is activated. Some actions have separate bounded paths; the absence of a grant row does not describe every route decision.
The new direct grants do not grant company administration, user permission management, blanket tool administration, or cross-company access. The responsible user's permissions, route checks, and the normal approval gates still apply.
Agent-authenticated callers cannot set process adapter configuration or switch an existing agent onto the process adapter. For local adapters, they cannot change host command, argument, working-directory, arbitrary environment, or filesystem sandbox command settings. Provider credential secret references on known environment keys remain allowed so agents can hire peers with their own credentials. When a caller uses an AI connection pool, a new peer can use a plain provider authentication override on the small allowlist of supported keys. Arbitrary environment keys remain blocked. The same limits apply to creation, hiring, adapter switches, and configuration rollback. They also cannot restore host-executed workspace commands through a configuration revision. This keeps host-executed commands under board control while standard agents configure other supported agent settings.
Exceptions and rollout
The new direct grants are withheld from low trust agents and managed built-in agents. Low trust run or project policies can also deny privileged actions even if an agent has a grant. There is no permission backfill or upgrade migration for existing agents. A standard pending new hire receives the new default set when approved and activated. Invitation approval retains the set when it replaces a new agent's grants and preserves any explicitly scoped default grant. Existing scoped grants stay unchanged. A grant removed by an operator stays removed; ordinary updates and startup do not reapply it.
The standard agent configuration default supports the agent setup in the linked runner task. Enabling a warm runtime can still depend on the target agent's adapter and runtime configuration, provider availability, and any responsible-user or approval checks.