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## Thinking Path > - Paperclip manages tasks across persistent agent sessions. > - The full Runner E2E catalog exposed failures in session restoration, tool validation, and test controls. > - These failures prevented valid work from resuming or made a valid interaction fail the test. > - Invalid completion reports also reached finalization before the provider received useful feedback. > - This pull request repairs those boundaries without changing production prompts or approval policy. > - Focused regressions and fresh paid cases verify each fix. ## Linked Issues or Issue Description Follow-up to #13655. Stacked on the trusted worker prerequisite fix in #13674. **What happened?** Read-only skill uploads failed in resumed Daytona sandboxes. Invalid criterion IDs escaped tool validation. A progress event could park a run before its tool response settled. Partial question forms hid required answers. Two test assumptions rejected valid plan keys or failed to navigate an optional question page. **What did you expect to happen?** Resume identical skill bundles, give repairable feedback for malformed completion calls, preserve in-flight tool responses, show all required questions, and test the rendered workflow accurately. **Steps to reproduce** Inspect the failed cases in https://github.com/paperclipai/paperclip/actions/runs/35417932353. Fresh campaigns: https://github.com/paperclipai/paperclip/actions/runs/35444497313 and https://github.com/paperclipai/paperclip/actions/runs/35445327618. The later backup cleanup is tested in https://github.com/paperclipai/paperclip/actions/runs/35446477285. Combined report: https://pages.paperclip.ing/runner-e2e-operational-35444497313/investigation.html. ## What Changed - Compare immutable archives before reusing read-only Daytona bundles. Reject corrupted content and preserve unrelated files. - Validate exact criterion IDs before accepting completion. OpenCode returns a tool error instead of emitting a result that terminates runnerd. - Complete the activity item for rejected OpenCode calls. - Remove retired read-only harness backups without altering live files or following symlinks. A fresh paid rerun exposed this later checkpoint-cleanup failure. - Exclude progress messages from the governed-wait completion boundary. - Reject newly created question forms that omit questions or contradict their stored answer semantics. Keep historical rows readable. - Navigate all rendered question pages and recognize revision-bound descriptive plan keys in the continuation suite. ## Verification - Harness unit suite: 383 tests pass. Harness typecheck passes. - Native session executor and status corpus: 381 tests pass. - Shared question and interaction-service tests: 42 pass; native question bridge and executor: 360 pass. Daytona sync: 21 pass, including foreign-owner archives and corrupted immutable content. - OpenCode driver: 29 tests pass, including wrong, missing, and duplicate criterion IDs followed by a valid retry. - Repository typecheck and build pass. The later OpenCode activity fix also passes its package build. - The latest commit passes all 52 PR checks and Greptile 5/5. The backup-cleanup fix also passes 351 related local tests and server typecheck. Local full-suite coverage completed across runs. adapter-auth-signal-routes and pipelines-routes encountered transient socket resets; both pass on retry, and all remaining 24 serialized files pass. Paid reruns are complete: 27 of 29 unique cases pass using the latest recording per case. Both Daytona controller-restart cases still fail with runner_state_identity_mismatch; the report describes this remaining runtime issue. Eight affected cells need #13674 on master before their rerun. ## Risks Creation rejects inconsistent dual question representations but does not change historical records. Immutable bundle comparison must verify bytes before skipping extraction. Completion feedback must use the contract bound to the current run. Durable suspension and approval checks remain enforced. Production prompts are unchanged. ## Model Used OpenAI GPT-6 via Codex, with repository inspection, code editing, and test execution. The exact API model ID and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>