Files
PaperClipAI/maps/feature-map/agents.md
T
DottaandPaperclip f0877a9c7c fix: recover native work and requalify saved computers (#17724)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/32/changes/paperclip/32
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip manages AI agents and preserves their work after an
interruption.
> - Native Stop must confirm termination and save the workspace.
> - Task and run views must show the current recovery receipt.
> - A new external reply can arrive while that cleanup is pending.
> - The reply must return to its original chat owner after cleanup.
> - A successful fresh retry also becomes the task’s bound workspace for
its next ordinary turn.
> - Managed computer updates can invalidate a saved snapshot
qualification.
> - This pull request fixes those instructions, acknowledgements,
handoffs and the existing native-agent Test path.
> - The operator can continue with new input while the stopped turn
remains preserved.

## Linked Issues or Issue Description

**What happened?**

Stopped native runs could keep the initial workspace-repair instruction
after files were recovered. Native Stop could also leave the shared
cancellation state at requested after remote termination was confirmed.
A new GitHub reply saved during cleanup could then remain queued because
cleanup did not ask its original inbound owner to reconsider the
receipt. After a managed snapshot update, an existing native agent could
also need qualification while the generic environment Test required
instance-admin access.

**Expected behavior**

Show the current saved-work state. Acknowledge Stop only after exact
termination proof. Let an authorized operator use the existing
saved-agent Run test to qualify its current computer. After cleanup,
recheck the saved reply's current authority and admit it once as new
input. Preserve the stopped run and uncertain external effects.

**Steps to reproduce**

1. Stop an active native turn before it returns a semantic result.
2. Send a new authorized external reply while cleanup is pending.
3. Let workspace recovery and provider cleanup finish. Inspect the run
instruction, Stop acknowledgement and queued reply.

Related work: #17594 preserves native processes through controller
outages. #17401 addresses a separate bootstrap failure. This pull
request does not replace those fixes.

## What Changed

- Use the exact run's workspace recovery receipt for task and run
guidance, including the Activity ledger.
- Retire an obsolete exact-session notice through the existing bounded
reconciler. Preserve the separate no-replay hold.
- Write the shared native Stop acknowledgement only after the audited
Stop intent and every exact remote lease receipt match.
- Delegate saved external input to the live inbound owner. Recheck its
source, actor, endpoint, principal and conversation generation. Promote
the same receipt in the transaction that creates its new run.
- Use that owner from the cleanup callback and existing stranded-queue
catch-up after a lost callback or restart. A denied source cannot abort
other items.
- Reuse the current private task directory after a successful fresh
retry. Re-read the company/task/workspace binding and validate the
canonical stable or attempt namespace without recreating missing files;
keep a later fresh retry separate.
- Extend the existing agent-scoped qualification owner to native agents.
The clean saved-agent Test qualifies its exact computer before runtime
testing. Reuse a current proof; require a real probe and verified
cleanup for a stale proof. Preserve draft tests and metadata-only
external/pool previews.
- Update execution semantics, capability maps and the recovery
verification recipe. Add a production-page Storybook interaction for the
normal native Test.

## Verification

- **Red:** persisted recovery states returned stale instructions; an
exact terminated native lease left shared Stop requested; the real
GitHub subscribed-message fixture left zero successors after cleanup.
The controlled baseline restored the previous production source,
reproduced the failure, then restored the fixed bytes with matching
SHA-256 hashes.
- **Green:** 382 durable-chat, native-continuation, Stop and recovery
tests pass. The real GitHub/PostgreSQL handoff matrix passes 12/12. It
covers callback, application restart, callback/sweep race, valid input
behind a deleted source, and denial for unknown stop, wrong allocation,
paused endpoint, revoked principal, deleted or changed source, changed
conversation generation and foreign scope. Repeated callbacks preserve
one receipt, its actor, one successor and the unchanged stopped
predecessor.
- **Workspace continuation red/green:** the real PostgreSQL preparation
flow created a fresh attempt and saved a marker, then rejected the next
ordinary turn with the same binding mismatch observed in deployed use.
The repaired preparation and filesystem suites pass 86/86: stable and
attempt-root reuse, saved-marker preservation, a later clean sibling,
changed current bindings, foreign company/task, closed workspace,
traversal, missing path and symlink refusal. No task row reset or
old-turn replay is used.
- **Qualification red/green:** a native saved-agent qualification
returned 422, and its normal Test skipped qualification. The repaired
path passes 224 qualification/immutable-snapshot/environment tests and
176 UI/upgrade tests. It covers revoked authority, foreign or changed
computer, current-proof reuse, failed/missing proof, draft settings,
settings changed during the probe, and external/pool previews. On exact
current source, the real local Harness / Runtime UI also qualified a
newly saved disposable Computer with missing proof through actual
Daytona, then completed the actual OpenCode/OpenRouter hello probe using
`openrouter/deepseek/deepseek-v4.1-flash-1017`. Supported availability
changed from Legacy-only to Paperclip Runner after proof persistence.
Qualification and runtime leases both completed normal release/cleanup.
The five prior task run IDs were unchanged; no task wake was created.
This is macOS source-server/UI with real Linux Daytona and provider
services, not a hosted UI claim. Test probes are archived by the
existing inspection contract; release does not claim physical deletion.
- Full workspace `pnpm -r typecheck`, `pnpm build`, token, map and diff
checks pass at `f6450f4739fc8141815b8b7c35fde22a655c5f90`. The broad
local `pnpm test:run` passed 24,899 tests and reported one existing
nested-clone test timeout at 15 seconds. The complete failing file then
passed 21/21 with the normal timeout; the exact case also passed on the
pinned earlier baseline. The broad runner stopped before its later
groups. No timeout or production workaround was added. Prior head
`f6450f4` has 53 successful checks, two conditional Storybook skips and
Greptile 5/5 with no inline threads. New workspace-reuse head
`fcb13399ec70f92f71bd8250081251dca3f48962` passes workspace typecheck,
full build, 86 scoped tests, maps and diff checks; Current-head CI has
53 successful checks and two conditional Storybook skips; Greptile is
5/5 with no inline findings. Deployed ordinary-turn reuse acceptance
passed as described below.

- **Hosted Stop proof:** the real GitHub issue-mention path used native
OpenCode, `openrouter/deepseek/deepseek-v4.1-flash-1017`, Daytona and an
exact low-trust task boundary. Normal UI Stop interrupted an active Bash
call. Native and shared acknowledgements matched the exact lease.
Automatic recovery saved exactly `STARTED\n` (8 bytes), with no finish
marker. Reload showed Stopped and saved work recovered. Only the
original cancelled run remained. Normal five-minute cleanup completed
its exact provider-destruction transition.
- **Limits:** the provider buffered command output, so the marker was
read after recovery. The approved local provider credential could not
inspect the hosted sandbox; its 404 is not deletion proof. Cleanup
success comes from the exact lease's platform destruction transition. An
earlier hosted stale instruction disappeared after rollout with
unchanged raw run/action data; that historical cause remains
unexplained. Original incident holds and publication receipts were
untouched.
- **Hosted handoff proof:** after QA deployed the combined candidate
containing `46b2e99`, startup admitted the previously saved GitHub
author reply without another comment, Retry or manual action. The new
native run used the exact original wake receipt and saved comment. It
completed once, committed an external-response wait, preserved the
stopped predecessor, emptied the queue and left the task In review. The
answer appeared in the original GitHub conversation. Workspace
finalization and the exact lease's normal destruction transition
succeeded.
- **Hosted workspace proof:** on the combined candidate containing
`fcb13399`, normal Retry preserved the original authenticated GitHub
request and completed a fresh native attempt. One later ordinary
same-head author reply then completed in the exact same workspace ID and
attempt directory, with no Retry/fresh directive. Its input tree digest
matched the Retry's finalized digest; final copyback preserved that
digest. The persisted assessment row and all five prior run records were
unchanged, exactly one new reply run completed, and the task returned to
In review with an empty queue and no live run. Both exact leases
completed normal verified destruction. This used real native OpenCode,
the exact DeepSeek/OpenRouter model and Daytona, without workspace-row
repair or a new remote marker.
- **Publication limit:** the workspace audit compares the persisted
assessment and run history. The ordinary reply exposed a separate
destination-summary fallback that changed the visible GitHub summary
despite the preserved assessment row. The publication track is repairing
that behavior; this proof does not claim the visible summary was
preserved.
- **Deployment boundary:** current-head CI/review and hosted same-source
Retry/ordinary-workspace reuse acceptance passed. The separate
visible-summary publication failure remains owned by the publication
track. Combined hosted UI confirmation of the native-agent Test path is
coordinated separately. Actual missing-proof UI/provider qualification
has passed in the isolated local instance above; prior hosted Stop and
same-input handoff proof remains separate. No merge or deployment is
performed by this pull request.

## Risks

Recovery state and termination receipts must match the exact source run
and allocation. Missing or foreign proof keeps the hold. The chat owner
must retain the original receipt and actor and recheck current
authority. Cleanup cannot grant authority or replay the stopped turn.
Existing native ownership, Stop, budget, permission and uncertain-effect
guards remain in place.

## Model Used

OpenAI GPT-6.1 Sol (`gpt-6.1-sol`) through Codex, with reasoning,
repository tools, source editing and test execution. The context-window
size is not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass (affected suites and
isolated failing file pass; broad timeout retained above)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green (current fcb has 53 successful
checks/two conditional Storybook skips)
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-26 22:21:58 -05:00

19 KiB
Raw Blame History

navigation
navigation
section sectionOrder order
Agents and reusable capabilities 30 10

Hiring, configuration, and organization

Operators hire agents, configure their identity and instructions, assign reporting relationships, and manage their lifecycle. Built-in agents have their own setup and lifecycle constraints.

Feature ID: agents.

Implementation: hiring, configuration, organization.

Agent access: companion.

Sub-features

  • hire: agents/hire — choose identity, harness, model, and required account settings; edit reporting relationships through the agent configuration afterward.
  • grok-bot: agents/grok-bot — experimental existing-Bot agent setup through remote OAuth, routine credentials, and an authenticated two-way challenge; current contact, stop and explicit recovery.
  • instructions: agents/instructions — edit agent configuration and instruction files with durable revisions.
  • organization: agents/organization — inspect and change reporting relationships through supported controls.
  • primary-agent: agents/primary-agent — choose a personal primary agent for the company, confirm replacement, and inspect its roster/sidebar and task/chat defaults.
  • lifecycle: agents/lifecycle — pause/resume or retire an agent while preserving history.
  • built-in: agents/built-in — configure required agents without treating them as ordinary removable hires.
  • api-keys: agents/api-keys — create and inspect named agent credentials, copy a new token once, and revoke it without changing agent identity.
  • managed-agent-setup: agents/managed-agent-setup — probe, create, or adopt a qualified Anthropic managed-agent profile with pinned provider resources and retention acknowledgement.

How to get to it (user POV)

hire-agent

Use New agent from the roster or /agents/new.

Submitting the name creates an inactive record before adapter selection or account setup. A name-only draft returns to adapter selection when reopened. Save & exit keeps its configuration; Finish setup on the agent returns to the same record. Final submission requests approval when required, then follows the existing preparation and verification lifecycle.

Agent-owned plugin environments prepare the saved draft in the background when their driver declares requiresAgent. The draft waits in verifying with its setup hold until hiring finishes. Changing environments keeps the selected account and Configure step, saves the selection, and invalidates its test. Preparation and failed-save retries remain visible without reconnecting. Companies requiring hire approval save the account with pending verification; resource allocation waits for approval.

agent-configuration

Open /agents/:agentId and the configuration/instruction surfaces it exposes.

For a low-trust agent, open Permissions / Trust → Allowed projects. An operator with agent-management permission can select additional projects and explicitly save them. Existing projects and other containment restrictions remain intact. Cancel discards the draft; a failed save retains it. Reload to verify persistence. This does not start or retry a task.

In /agents/all, select roster checkboxes and choose Edit connection & model. A mixed selection offers one action per harness. Each field is opt-in. The editor previews each changed value and excludes agents already at the target value. Models must be compatible with every selected connection. Failed writes show per-agent errors; Retry touches only the remaining agents. Connection pools and externally managed agents are not editable through this shortcut.

Verify connection-only, model-only, both fields, mixed-harness selection, hidden selections, no-op counts, incompatible models, partial failure and retry. Reload the roster and compare stored settings, including unrelated heartbeat and adapter fields. A concurrent configuration edit must return a conflict. Shared runtime validation, access checks, revisions and audit logging still apply. Live runs retain their existing settings; model changes can reset saved sessions. Connection adoption can require an explicit reset of existing sessions.

organization

Use the roster’s organization view; /org redirects to the roster in the streamlined shell.

personal-primary-agent

Open an agent profile and choose Set as my primary. Inspect its crown on the profile/roster and its position in the Agents sidebar, then open a new task or Chat.

agent-api-keys

Open /agents/:agentId/api-keys → API Keys with an authenticated person who can manage agents. The operator CLI also supports paperclipai token agent create -C <company-id> --agent <agent-id> --name <label>, token agent list -C <company-id> --agent <agent-id>, and token agent revoke <key-id> -C <company-id> --agent <agent-id>.

managed-agent-cli

Use the operator command paperclipai managed-agent setup --company-id <company-id> --profile-key <key> --display-name <name> --api-key-secret-id <company-secret-id> --acknowledge-retention --json. Supply ANTHROPIC_API_KEY through the process environment. Use --agent-id, --agent-version, and --environment-id to adopt resources, or --probe for provider reads without profile persistence. The optional session-list cost ceiling is --max-session-list-cost-usd.

Driving it with Playwright and the Paperclip CLI

Preconditions: follow the baseline. Use a disposable company and supported adapter; hiring may require a formal approval.

hire-agent

Automated: new agent page and configuration form cover mocked UI behavior.

For an agent-owned plugin environment, verify preparation before connecting, same-agent probes, account preservation after an environment change, failed selection-save retry, and switching back while the computer stops. Confirm the setup hold still blocks ordinary work and API key creation before finishing. The setup lifecycle tests exercise durable transitions with synthetic plugin resources; they do not prove live VM provisioning.

Manual: Hire an agent with a distinct name and role. Complete any required approval, reload the roster, and open its configuration. Confirm manager, adapter, and model persisted; run a small task to prove execution readiness.

For a new Codex hire, choose the Codex harness. Automatic selection uses Paperclip Runner on a qualified selected target; Advanced offers an explicit Legacy runner override. Record the persisted runner and underlying harness, rather than treating the displayed Codex name as execution proof. See runtime selection and validation and target qualification.

Repeat with an explicit Legacy Codex hire. If approval is required, compare its reviewed execution configuration before and after restart and activation; approval must retain the reviewed runner. Test an existing Legacy and native agent through an unrelated edit, reload and restart: neither is automatically upgraded.

Creation defaults also apply to API/CLI hires, built-ins, plugins and new team imports. Exports preserve resolved execution choices; a package without a runner choice uses the new-agent default, while updating an existing same-harness agent preserves its execution. For a native Codex import, edit a model or account binding and verify unchanged runtime settings survive; an explicit clear must stay cleared. Use the portability recipe for package preparation and boundaries.

For Claude Code on qualified macOS or GNU/Linux x64/ARM64, submit without a runner override and inspect saved configuration: paperclip_runner, provider: acpx, acpxAgent: claude, and ordinary model claude-opus-5-5. The Advanced runner selector can explicitly choose Legacy. Keep explicit model/account choices and saved runners on edits. Verify useful output and a follow-up after a controller restart; setup success alone does not establish session continuity. Unsupported architectures/libc and unknown environment qualification retain Legacy. Darwin SSH also defaults to Legacy until automatic matching assets are qualified; explicit matching native assets and saved native configurations remain supported. Linux ARM64 cloud-image production remains deferred.

The current hiring wizard assigns the first hire CEO and subsequent hires General reporting to the CEO. Change manager/role afterward through supported configuration. Process/HTTP agents can be created through API/CLI but are excluded from the hiring picker; API fixture creation does not prove this UI journey.

agent-configuration

Automated: instruction service and instruction revisions cover file/revision contracts.

The AI account field regression checks duplicate provider names, account identity in choices and adoption confirmation, the exact selected grant, and disabled unavailable accounts with authorized metadata fixtures. Manually compare a personal API key and shared subscription with the same name in Harness / Runtime. Confirm their method, scope and available identity before saving. Reload the saved choice and verify the next eligible task uses it; labels alone do not establish credential validity or change account access.

Manual: Save a harmless instruction edit, reload, and verify its revision and effect in the next eligible run. Pause and resume the disposable agent; confirm pause prevents new work and does not erase previous runs.

For failed setup, use an unavailable model or invalid command on a disposable agent. Confirm the profile names the failed verification step and gives a relevant action. Check that it explains automatic retry and offers Retry now. Fix the configuration, retry, and reload; the failure must disappear only after readiness commits. Provider output and credentials must not appear in the lifecycle message.

An explicit runner change is a configuration change, with normal revisions and session invalidation. Obsolete Claude tuning options (including maxTurnsPerRun) are ignored with a field-specific warning; permission, network, filesystem and command incompatibilities still produce an error. Selecting another runner must not silently discard security settings or change an active run's recorded execution. Keep runner choice in Advanced and verify the next eligible run separately from historical transcripts.

Existing legacy Claude and Codex agents on qualified default environments, or probe-capable Daytona snapshots / immutable sandbox images, show Upgrade runner above their configuration. Verify a company owner with agents:configure and no instance-admin role can qualify the saved computer and upgrade. A caller without configuration permission must be denied before a probe starts. Exercise that action with pending edits and an environment-variable draft. An unsaved change to a different effective computer must disable the action and explain that the computer change must be saved first; restoring the saved target must re-enable it. Reopen the page and compare the saved harness, model, account bindings, instructions, and run policy. Check a saved maxTurnsPerRun: 1000: upgrade must warn and remove it. Test an initially unqualified Daytona Paperclip Computer: click must probe, record qualification, refresh availability, and only then save. A failed probe or changed selection must leave the agent on Legacy. Check a rejected permission setting, repair it, and retry. Verify a real task before and after migration, including its output, preserved history, and fresh session. The notice must stay absent for native agents, other harnesses, and unsupported targets. Discovery failure must not imply that an upgrade is available. Navigate to another agent while an upgrade is pending. Its result must stay with the original agent, without showing success on the new page or redirecting back. Focused coverage: save receipt and configuration form.

For an existing native agent on a Daytona snapshot or immutable sandbox image, use Test in its saved Harness or Runtime configuration after a managed computer update. This action qualifies the saved computer under the existing agent configuration permission before testing the runtime. A current proof must remain unchanged. A missing proof requires a real successful probe and verified cleanup. Failed qualification must stop the runtime test. Unsaved configuration or a different computer must not qualify a draft target. A company owner must not need instance-admin permission, and the generic environment probe must remain restricted. Existing runs retain their recorded allocation and snapshot binding.

Storybook: Runner upgrade mounts the production page and shell with mutable HTTP fixtures for both harnesses, pending, failure/retry, incompatible settings, repair, native/unsupported states, and mobile/light presentation. Fixture success does not establish real migration or provider execution.

organization

Automated: org chart is component evidence. Built-in setup also has configuration modal tests.

Manual: Inspect a manager and report, change the relationship through the offered controls, and reload both views. Exercise a rejected invalid relationship. Configure a built-in agent and verify it retains its required identity and restrictions.

personal-primary-agent

Automated: primary-agent context and primary-agent routes cover selection, company/user scope, and request contracts.

Manual: Select an available agent, reload, and inspect the retained personal choice. Replace it and verify confirmation is required. Leave or terminate the selected agent through permitted controls and inspect the unavailable/cleared state. Switch company/user to check isolation. Open a task and Chat with a valid draft or recent selection; verify those explicit choices take precedence over the primary fallback. Opening Chat must not start execution.

agent-api-keys

Automated: CLI token tests mock create/list/revoke. Cross-tenant routes, agent permissions, and authentication middleware cover company/key ownership, management permission, responsible-user binding, and denial. They do not prove a browser-created key working against a live instance.

Manual: As an authenticated person with agents:create, create a named key for an eligible disposable agent and copy it privately from the once-only display. Make a harmless same-company agent request with that bearer, then reload the Keys tab and verify only metadata remains. Revoke the key through UI or CLI, reload, and retry the exact same bearer: authentication must fail. Inspect key-created/key-revoked activity without token values. Test a board person lacking agent-management permission, an agent caller, another company’s agent, a different agent’s key ID, and a pending-approval/terminated target. A created key without a real responsible-user binding is a failed acceptance prerequisite, not a working credential.

Sources: Keys tab, key routes, key service, authentication, and CLI token commands.

managed-agent-cli

Automated: Managed-agent CLI uses mocked provider/API responses. Profile route authorization and remote profiles cover actor/company checks and qualification. They do not establish provider provisioning or a useful managed task.

Manual: Start with known adopted provider IDs in an authorized disposable provider account. Run --probe and verify only provider reads: no resources are created and no Paperclip profile is written. Reject unsafe tools/network/package configuration, an unsupported model, duplicate profile matches, a missing retention acknowledgement, and a malformed secret UUID. During persistence, reject missing, inactive, or foreign-company secret references. Then create or adopt a locked profile in a disposable company; inspect its pinned version, model, environment, retention attestation, and cost ceiling through the profile API. Repeat setup and verify resource reuse. Reject viewer/agent writes and foreign-company references. Qualify useful task execution separately through the runtime recipe; a successful probe is not execution acceptance.

Sources: Managed-agent CLI, profile routes, profile service, and runtime validation.

Gotchas

  • Managed-agent probing is read-only at the provider and does not persist a Paperclip profile. The explicit retention acknowledgement remains required even for probe.

  • Agent keys, human CLI tokens, and personal assistant OAuth grants are different credentials. Never include a key’s plaintext token in screenshots, logs, or verification artifacts.

  • A roster entry is not proof of an authenticated or invokable adapter.

  • Pending hires may live in approval/task surfaces rather than the active roster.

  • Skill and tool grants are separate: see skills and app permissions.

  • A personal primary agent is a per-user/company preference. It does not change reporting lines, stars, permissions, or another person's primary agent.

connect-grok-bot

Choose Invite an external agent → Grok Bot, identify the Bot by its desktop name, connect its remote MCP plugin, configure a webhook-only routine, and verify delivery plus authenticated reply. Save & exit resumes the same agent. Keep pairing codes in browser authorization and routine credentials in Paperclip’s fields. A working Bot web URL is not required.

Prerequisites: authenticated public HTTPS, Assistant connections (MCP), Paperclip Runner and Grok Bot experimental settings. Cloud uses its normal managed Runner environment. Provider usage is unknown. Routine uncertainty blocks new assignments until explicit inspection and recovery; stopping work revokes Paperclip authority without confirming remote termination.

Evidence: source implementation and focused protocol tests; real provider assigned/proactive workflows and deployed managed acceptance remain release gates.

Documentation scope: Agents, organization, and runtime setup

Per-harness/model/account capabilities, every instruction-file error, and complete built-in-agent lifecycle variants remain separate qualification matrices.