Files
PaperClipAI/cli/src/index.ts
T
DottaandPaperclip 43b005b704 Add pipeline workflow primitives and operator UI (#7903)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The pipeline subsystem models repeatable work as items moving
through stages, with agent automation, review gates, blockers, drift
notices, and linked work.
> - Operators need this to be usable as one coherent workflow surface,
not just as backend primitives or disconnected route experiments.
> - The branch now carries the pipeline data model, service/routes,
CLI/tutorial path, aggregation feeds, operator UI, stage automation
controls, liveness/retry handling, and follow-up polish that make the
primitive reviewable end to end.
> - This pull request is the single review target for that pipeline
workflow primitive stack.
> - The benefit is that reviewers can evaluate the full operator
experience and server contract together against `master`.

## Linked Issues or Issue Description

No public GitHub issue exists for this work. The underlying feature
request is described inline.

### Problem or motivation

Paperclip needs a first-class way to model multi-stage agent/company
workflows where upstream items can spawn downstream work, request
review, carry fields across pipelines, surface drift, retry automation,
and show operators where work is blocked or active. Without a unified
pipeline primitive, these workflows spread across ad hoc issues,
routines, and comments, making the state hard to inspect or operate.

### Proposed solution

Add the pipeline workflow primitive stack: database schema and
migrations, shared validators/types, server services and REST routes,
aggregation and liveness helpers, CLI/tutorial smoke support, and the
React operator UI for pipeline lists, boards, item detail,
review/learnings views, settings, stage automation, secrets, carry-over
fields, and retry/recovery flows.

### Alternatives considered

- Keep workflows as loosely linked issues and routines: rejected because
operators need a single board/detail/settings surface for repeated
workflow patterns.
- Ship backend primitives first and defer UI: rejected for this branch
because the operator experience is the main way to validate the
primitive.
- Add a narrower one-off content workflow: rejected because the same
primitives are useful across future company processes.

## What Changed

- Added and evolved pipeline schema, migrations, shared contracts,
server services, REST routes, route tests, and CLI/tutorial smoke
support.
- Added pipeline aggregation, health/liveness, drift acknowledgment,
blocker/carry-over, automation retry, stage automation environment, and
permission recovery behavior.
- Added the operator UI for pipeline index/board/item
detail/settings/review/learnings flows, including stage secrets,
automation controls, markdown/item descriptions, linked issue assets,
liveness banners, and source automation metadata.
- Refactored issue document frame rendering through the shared
`DocumentFrameHeader` component to keep document controls consistent
with the pipeline document surfaces.
- Kept this PR as the single base-branch review target for the current
pipeline branch.

## Verification

Current branch refresh:

- `pnpm vitest run server/src/__tests__/pipelines-service.test.ts` — 31
passed
- `pnpm vitest run server/src/__tests__/pipelines-routes.test.ts` — 19
passed
- `pnpm --filter ./server typecheck` — passed
- `pnpm --filter ./ui typecheck` — passed
- Verified Pipelines remains gated by `enablePipelines === true`:
sidebar item is hidden unless the flag is enabled, direct pipeline
routes redirect to `/dashboard` when disabled, and the Experimental
settings UI still has no Pipelines toggle.
- GitHub status checks on `df071c710646de625131064c3fb6588b5e97964a` —
all complete with no failing conclusions, including Actions, Socket,
Superagent/Security, and Greptile Review
- Greptile summary on `df071c710646de625131064c3fb6588b5e97964a` —
Confidence Score 5/5
- GitHub review-thread sweep — 0 unresolved Greptile threads

Previously recorded during branch development:

- Server pipeline service/route and aggregation tests
- Shared validator tests
- UI pipeline page/settings/item-detail/learnings/liveness tests
- Pipeline tutorial smoke path

## Risks

- High review surface: this is a large feature branch spanning database,
shared contracts, server behavior, CLI/docs, and UI.
- Migration ordering and schema compatibility need reviewer attention
because this branch has been kept current across multiple `master`
syncs.
- GitHub still reports merge state `BLOCKED` because the PR is awaiting
normal human review/branch-protection completion; all current status
checks are green.
- Branch-name checklist exception: this PR uses the pre-existing
requested branch name, which predates the current public-branch naming
rule. The PR title/body avoid internal issue references.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

OpenAI Codex coding agent based on GPT-5, with repository tool use,
shell execution, git/GitHub CLI operations, and local verification
commands. Earlier commits in this branch were assisted by Paperclip
agents and other AI coding agents as recorded in commit authorship.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [ ] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-06-26 12:02:44 -05:00

222 lines
9.4 KiB
TypeScript

import { Command } from "commander";
import { onboard } from "./commands/onboard.js";
import { doctor } from "./commands/doctor.js";
import { envCommand } from "./commands/env.js";
import { configure } from "./commands/configure.js";
import { addAllowedHostname } from "./commands/allowed-hostname.js";
import { heartbeatRun } from "./commands/heartbeat-run.js";
import { runCommand } from "./commands/run.js";
import { bootstrapCeoInvite } from "./commands/auth-bootstrap-ceo.js";
import { dbBackupCommand } from "./commands/db-backup.js";
import { registerEnvLabCommands } from "./commands/env-lab.js";
import { registerContextCommands } from "./commands/client/context.js";
import { registerCompanyCommands } from "./commands/client/company.js";
import { registerIssueCommands } from "./commands/client/issue.js";
import { registerAgentCommands } from "./commands/client/agent.js";
import { registerProjectCommands } from "./commands/client/project.js";
import { registerGoalCommands } from "./commands/client/goal.js";
import { registerApprovalCommands } from "./commands/client/approval.js";
import { registerActivityCommands } from "./commands/client/activity.js";
import { registerDashboardCommands } from "./commands/client/dashboard.js";
import { registerRoutineCommands } from "./commands/routines.js";
import { registerPipelineCommands } from "./commands/pipelines.js";
import { registerFeedbackCommands } from "./commands/client/feedback.js";
import { registerSecretCommands } from "./commands/client/secrets.js";
import { registerCloudCommands } from "./commands/client/cloud.js";
import { registerSkillsCommands } from "./commands/client/skills.js";
import { registerTeamCommands } from "./commands/client/teams.js";
import { applyDataDirOverride, type DataDirOptionLike } from "./config/data-dir.js";
import { loadPaperclipEnvFile } from "./config/env.js";
import { initTelemetryFromConfigFile, flushTelemetry } from "./telemetry.js";
import { registerWorktreeCommands } from "./commands/worktree.js";
import { registerPluginCommands } from "./commands/client/plugin.js";
import { registerClientAuthCommands } from "./commands/client/auth.js";
import { registerConnectCommand } from "./commands/client/connect.js";
import { registerTokenCommands } from "./commands/client/token.js";
import { registerPromptCommands } from "./commands/client/prompt.js";
import { registerRunCommands } from "./commands/client/run.js";
import { registerCostCommands } from "./commands/client/cost.js";
import { registerWorkspaceCommands } from "./commands/client/workspace.js";
import { registerAccessCommands } from "./commands/client/access.js";
import { registerRoutineApiCommands } from "./commands/client/routine-api.js";
import { registerAdapterCommands } from "./commands/client/adapter.js";
import { registerAssetCommands } from "./commands/client/asset.js";
import { registerSkillCommands } from "./commands/client/skill.js";
import { cliVersion } from "./version.js";
const program = new Command();
const DATA_DIR_OPTION_HELP =
"Paperclip data directory root (isolates state from ~/.paperclip)";
program
.name("paperclipai")
.description("Paperclip CLI — setup, diagnose, and configure your instance")
.version(cliVersion);
program.hook("preAction", (_thisCommand, actionCommand) => {
const options = actionCommand.optsWithGlobals() as DataDirOptionLike;
const optionNames = new Set(actionCommand.options.map((option) => option.attributeName()));
applyDataDirOverride(options, {
hasConfigOption: optionNames.has("config"),
hasContextOption: optionNames.has("context"),
});
loadPaperclipEnvFile(options.config);
initTelemetryFromConfigFile(options.config);
});
program
.command("onboard")
.description("Interactive first-run setup wizard")
.option("-c, --config <path>", "Path to config file")
.option("-d, --data-dir <path>", DATA_DIR_OPTION_HELP)
.option("--bind <mode>", "Quickstart reachability preset (loopback, lan, tailnet)")
.option("-y, --yes", "Accept quickstart defaults (trusted local loopback unless --bind is set) and start immediately", false)
.option("--run", "Start Paperclip immediately after saving config", false)
.action(onboard);
program
.command("doctor")
.description("Run diagnostic checks on your Paperclip setup")
.option("-c, --config <path>", "Path to config file")
.option("-d, --data-dir <path>", DATA_DIR_OPTION_HELP)
.option("--repair", "Attempt to repair issues automatically")
.alias("--fix")
.option("-y, --yes", "Skip repair confirmation prompts")
.action(async (opts) => {
await doctor(opts);
});
program
.command("env")
.description("Print environment variables for deployment")
.option("-c, --config <path>", "Path to config file")
.option("-d, --data-dir <path>", DATA_DIR_OPTION_HELP)
.action(envCommand);
program
.command("configure")
.description("Update configuration sections")
.option("-c, --config <path>", "Path to config file")
.option("-d, --data-dir <path>", DATA_DIR_OPTION_HELP)
.option("-s, --section <section>", "Section to configure (llm, database, logging, server, storage, secrets)")
.action(configure);
program
.command("db:backup")
.description("Create a one-off database backup using current config")
.option("-c, --config <path>", "Path to config file")
.option("-d, --data-dir <path>", DATA_DIR_OPTION_HELP)
.option("--dir <path>", "Backup output directory (overrides config)")
.option("--retention-days <days>", "Retention window used for pruning", (value) => Number(value))
.option("--filename-prefix <prefix>", "Backup filename prefix", "paperclip")
.option("--json", "Print backup metadata as JSON")
.action(async (opts) => {
await dbBackupCommand(opts);
});
program
.command("allowed-hostname")
.description("Allow a hostname for authenticated/private mode access")
.argument("<host>", "Hostname to allow (for example dotta-macbook-pro)")
.option("-c, --config <path>", "Path to config file")
.option("-d, --data-dir <path>", DATA_DIR_OPTION_HELP)
.action(addAllowedHostname);
const run = program
.command("run")
.description("Bootstrap local setup (onboard + doctor) and run Paperclip")
.option("-c, --config <path>", "Path to config file")
.option("-d, --data-dir <path>", DATA_DIR_OPTION_HELP)
.option("-i, --instance <id>", "Local instance id (default: default)")
.option("--bind <mode>", "On first run, use onboarding reachability preset (loopback, lan, tailnet)")
.option("--repair", "Attempt automatic repairs during doctor", true)
.option("--no-repair", "Disable automatic repairs during doctor")
.action(runCommand);
registerRunCommands(run);
const heartbeat = program.command("heartbeat").description("Heartbeat utilities");
heartbeat
.command("run")
.description("Run one agent heartbeat and stream live logs")
.requiredOption("-a, --agent-id <agentId>", "Agent ID to invoke")
.option("-c, --config <path>", "Path to config file")
.option("-d, --data-dir <path>", DATA_DIR_OPTION_HELP)
.option("--context <path>", "Path to CLI context file")
.option("--profile <name>", "CLI context profile name")
.option("--api-base <url>", "Base URL for the Paperclip server API")
.option("--api-key <token>", "Bearer token for agent-authenticated calls")
.option(
"--source <source>",
"Invocation source (timer | assignment | on_demand | automation)",
"on_demand",
)
.option("--trigger <trigger>", "Trigger detail (manual | ping | callback | system)", "manual")
.option("--timeout-ms <ms>", "Max time to wait before giving up", "0")
.option("--json", "Output raw JSON where applicable")
.option("--debug", "Show raw adapter stdout/stderr JSON chunks")
.action(heartbeatRun);
registerContextCommands(program);
registerConnectCommand(program);
registerCompanyCommands(program);
registerIssueCommands(program);
registerAgentCommands(program);
registerProjectCommands(program);
registerGoalCommands(program);
registerTokenCommands(program);
registerPromptCommands(program);
registerApprovalCommands(program);
registerActivityCommands(program);
registerDashboardCommands(program);
registerCostCommands(program);
registerWorkspaceCommands(program);
registerAccessCommands(program);
registerRoutineApiCommands(program);
registerAdapterCommands(program);
registerAssetCommands(program);
registerSkillCommands(program);
registerRoutineCommands(program);
registerPipelineCommands(program);
registerFeedbackCommands(program);
registerSecretCommands(program);
registerCloudCommands(program);
registerSkillsCommands(program);
registerTeamCommands(program);
registerWorktreeCommands(program);
registerEnvLabCommands(program);
registerPluginCommands(program);
const auth = program.command("auth").description("Authentication and bootstrap utilities");
auth
.command("bootstrap-ceo")
.description("Create a one-time bootstrap invite URL for first instance admin")
.option("-c, --config <path>", "Path to config file")
.option("-d, --data-dir <path>", DATA_DIR_OPTION_HELP)
.option("--force", "Create new invite even if admin already exists", false)
.option("--expires-hours <hours>", "Invite expiration window in hours", (value) => Number(value))
.option("--base-url <url>", "Public base URL used to print invite link")
.action(bootstrapCeoInvite);
registerClientAuthCommands(auth);
async function main(): Promise<void> {
let failed = false;
try {
await program.parseAsync();
} catch (err) {
failed = true;
console.error(err instanceof Error ? err.message : String(err));
} finally {
await flushTelemetry();
}
if (failed) {
process.exit(1);
}
}
void main();