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<!-- entire-trail-link-start --> https://entire.com/gh/paperclipai/-/trails/103/changes/paperclip/103 <!-- entire-trail-link-end --> ## Thinking Path > - Paperclip manages real agent work. > - Controlled Runner evaluations record model spend and traces. > - A trusted build creates one portable controller with a complete file inventory. > - GitHub artifact upload omitted one hidden dependency metadata file. > - The next job correctly refused the incomplete inventory before any paid worker started. > - This change preserves all inventoried bytes without relaxing verification. ## Linked Issues or Issue Description Refs #17889, #17929. **What happened?** [Run 40585138437](https://github.com/paperclipai/paperclip/actions/runs/40585138437) failed at copied controller verification. Its artifact contains 294 files; its signed inventory expects 295. The only missing file is `server/node_modules/protobufjs/node_modules/@protobufjs/pool/.npmignore`. No extra files exist. Every paid worker was skipped and no model request ran. **Expected behavior** The trusted controller artifact preserves its full inventory, including hidden package metadata. The strict verifier rejects any actual change or missing file. **Steps to reproduce** Build the portable runtime, upload the directory with the action's default hidden-file exclusion, then verify the downloaded artifact against the original receipt. ## What Changed - Enable hidden files only on the fresh trusted controller code upload. - Download that exact upload and run a real artifact-service round-trip test before any private preparation. The test fails if the upload drops hidden files again; it tests the actual transport instead of matching a YAML flag. - Keep the strict byte inventory and trusted source/receipt checks. - Document why this code artifact differs from private attempt evidence, which still uses the protected archive. ## Verification - Exact retained artifact comparison: one missing `.npmignore`, zero extra files. - `actionlint .github/workflows/runner-protocol-live-evals.yml` passed. - Protocol workflow security tests: 14 passed. - The artifact-service integration test is explicit-only locally. The controlled workflow supplies the real downloaded artifact, trusted source and receipt digest. - No product runtime, provider routing or grading code changed. CI runs broader checks. Fresh controlled workflow qualification follows merge. ## Risks Hidden files are allowed only in the code-only output of the provider-credential-free build. Raw private evidence and credentials do not enter that upload. The artifact verifier still requires every file and SHA-256 from the trusted receipt. ## Model Used OpenAI Codex, GPT-6 family, with reasoning, repository inspection and code execution. The exact serving model ID and context window are not exposed to this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>