mirror of
https://github.com/paperclipai/paperclip.git
synced 2026-10-24 10:13:11 +02:00
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work
> - Each issue's agent works in a git worktree that Paperclip keeps on
the instance's disk
> - Git cache expiration removes a closed issue's worktree only when the
remote can reproduce it exactly: every commit pushed, nothing
uncommitted
> - Most closed worktrees fail that test, so they are kept forever and
disks fill up
> - A restore point that saves only the part the remote cannot reproduce
would let those worktrees be removed without losing work
> - This pull request adds the library to capture, verify, encrypt and
restore such restore points, with no callers yet
> - The benefit is a small, reviewable foundation for removing unpushed
and uncommitted worktrees safely in follow-up changes
## Linked Issues or Issue Description
Bug report described in-PR (bug report template).
**What happened?**
Closed issues' worktrees accumulate without bound. With
`PAPERCLIP_GIT_CACHE_EXPIRATION_ENABLED=true` and dry run off, one
instance's last 111 expiration checks expired nothing. The skip reasons
were:
| Skip reason | Checks |
|---|---|
| `dirty_or_untracked_files` | 39 |
| `unpushed_managed_checkout` | 32 |
| `live_or_unresolved_consumer` | 21 |
| `unique_ignored_files` | 9 |
| commit not on the remote | 10 |
Without expiration, the terminal workspace reaper only archives merged,
clean worktrees. One local instance archived 37 workspaces across about
6,200 sweeps.
**Expected behavior**
A closed worktree can be removed once anything the remote cannot
reproduce is saved, and restored exactly if the work resumes.
**Steps to reproduce**
1. Close an issue whose worktree has an unpushed commit or an untracked
file.
2. Enable git cache expiration with dry run off.
3. The worktree is never removed; expiration reports
`dirty_or_untracked_files` or `upstream_commit_unverified`.
**Paperclip version or commit:** `master` at def4726bea.
**Deployment mode:** any; observed on a server instance and a local
instance.
**Agent adapter(s) involved:** not adapter-specific (core bug).
## What Changed
New `server/src/services/git-restore-point.ts`, a library that nothing
calls yet:
- **`captureRestorePoint`**
- Snapshots the index and the working tree as deterministic commits in a
temporary object store. The store borrows the repository's objects
through alternates and writes none of its own into the repository.
- Bundles those snapshot commits, unpushed commits, and commits
reachable only from the reflog or `ORIG_HEAD`, against the remote
commits as prerequisites.
- Returns `null` when the remote can already reproduce everything.
Refuses to capture when more than 50 history-only commits exist, rather
than dropping any.
- **Leaves out:** ignored files (such as `node_modules`), and untracked
`.env` and `.env.*` files. Provisioning recreates environment files with
current secrets. Edits to tracked environment files, such as
`.env.example`, are captured.
- **Skips** nested untracked repositories, paths with a filter
attribute, gitlinks and changes over size limits rather than capturing
them partially. Special files are ignored, because git never tracks
them.
- **`currentRestorePointSnapshot`** recomputes the snapshot ids, so a
caller can prove nothing changed between capture and deletion.
- **`importRestorePoint`** verifies the bundle's prerequisites and refs
against the manifest, then imports the objects without leaving refs
behind.
- **`applyRestorePoint`**
- Requires `HEAD` to match.
- Restores the working tree (`git apply`), the index (`read-tree`) and
non-default file modes.
- Then recomputes the snapshot and requires it to equal the captured
one.
- **`sealRestorePoint` / `openRestorePoint`**
- Encrypt with a fresh AES-256-GCM key per restore point, with the
restore point's identity as additional authenticated data.
- The data key is wrapped by the instance secrets provider
(`localEncryptedProvider`), the same pattern already used for saved
Claude settings.
- Opening checks the ciphertext hash, the key's bound identity, the GCM
tag, and the plaintext hash and size.
- **Isolation:** every git command runs with system and global config
disabled, hooks disabled, and line-ending conversion off.
- New `server/src/__tests__/git-restore-point.test.ts`.
- No code comments were added.
## Verification
- `pnpm exec vitest run src/__tests__/git-restore-point.test.ts` (in
`server/`): 18 passed, using real repositories and a bare remote. The
cases:
- **Full round trip** into a fresh clone that lacks the unpushed
commits, covering:
- two unpushed commits;
- staged and unstaged edits of the same file;
- a deletion, an untracked file, a symlink, `0755` and `0600` modes;
- `node_modules` and `.env` files left out.
- **No-op:** capture returns `null` for a reproducible workspace, and
creates no objects in the repository (`fsck --unreachable` stays empty).
- **Snapshot ids** are deterministic and change when contents change.
- **History-only commits** are preserved and leave no refs after import.
- **Skips:** nested repositories and size limits. Special files are
ignored.
- **Rejections:** missing prerequisites and `HEAD` mismatches.
- **Encryption:** tampering, truncation, a wrong identity and a
different master key are all rejected.
- **Review regressions:** edits to a tracked `.env.example` are
captured; staged files whose contents match the index get limits and
modes; permission-only changes change the snapshot; a configured `diff`
textconv does not alter restored bytes; more than 50 history-only
commits refuses capture.
- **Mutation checks:** removing the `.env` exclusion or the index
restore fails the round trip, and removing each review fix fails its
regression test.
- **Stability:** 12 consecutive runs passed. An earlier version copied
the index for the working-tree snapshot and was racy when a file changed
within the same second. It now starts from `HEAD`'s tree instead.
- `pnpm run typecheck` (in `server/`): pass.
## Risks
- **No behavior change:** nothing calls the library yet.
- **Follow-ups:** wiring it into expiration (storage, metadata
versioning, restore on reopen and on the next run, and retention) comes
in separate PRs behind configuration that defaults to off.
- **Key dependence:** a restore point is only as recoverable as the
instance's secrets master key. The follow-up wiring will refuse to
create restore points when that key is not durable.
- **Rollback:** revert.
## Model Used
- Claude Opus 5.5 (`claude-opus-5-5`), 1M context, through Claude Code
with tool use (shell, file edits, tests, read-only measurements on live
instances).
## Checklist
- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [ ] I will address all Greptile and reviewer comments before
requesting merge
---------
Co-authored-by: Paperclip <noreply@paperclip.ing>
305 lines
15 KiB
TypeScript
305 lines
15 KiB
TypeScript
import { execFileSync } from "node:child_process";
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import fs from "node:fs/promises";
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import os from "node:os";
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import path from "node:path";
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import { afterEach, beforeEach, describe, expect, it, vi } from "vitest";
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import {
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applyRestorePoint,
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captureRestorePoint,
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currentRestorePointSnapshot,
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importRestorePoint,
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openRestorePoint,
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RestorePointRestoreFailure,
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RestorePointSkip,
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sealRestorePoint,
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} from "../services/git-restore-point.ts";
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const identity = { companyId: "company-1", workspaceId: "workspace-1", restorePointId: "restore-1", generation: 1 };
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function git(cwd: string, ...args: string[]) {
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return execFileSync("git", ["-C", cwd, ...args], {
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encoding: "utf8",
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env: { ...process.env, GIT_CONFIG_NOSYSTEM: "1", GIT_CONFIG_GLOBAL: os.devNull, GIT_AUTHOR_NAME: "Test", GIT_AUTHOR_EMAIL: "t@example.com", GIT_COMMITTER_NAME: "Test", GIT_COMMITTER_EMAIL: "t@example.com" },
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}).trim();
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}
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async function write(root: string, relative: string, contents: string, mode?: number) {
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await fs.mkdir(path.dirname(path.join(root, relative)), { recursive: true });
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await fs.writeFile(path.join(root, relative), contents);
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if (mode !== undefined) await fs.chmod(path.join(root, relative), mode);
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}
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async function read(root: string, relative: string) {
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return fs.readFile(path.join(root, relative), "utf8");
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}
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describe("git restore points", () => {
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let root: string;
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let remote: string;
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let work: string;
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beforeEach(async () => {
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vi.stubEnv("PAPERCLIP_SECRETS_MASTER_KEY", "31".repeat(32));
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root = await fs.mkdtemp(path.join(os.tmpdir(), "paperclip-restore-point-test-"));
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remote = path.join(root, "remote.git");
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work = path.join(root, "work");
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git(root, "init", "-q", "--bare", "-b", "master", remote);
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git(root, "clone", "-q", remote, work);
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await write(work, ".gitignore", "node_modules/\n.env\n");
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await write(work, "src/app.ts", "export const value = 1;\n");
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await write(work, "src/remove-me.ts", "export const gone = true;\n");
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await write(work, "README.md", "hello\n");
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git(work, "add", "-A");
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git(work, "commit", "-q", "-m", "initial");
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git(work, "push", "-q", "origin", "HEAD:master");
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});
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afterEach(async () => {
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vi.unstubAllEnvs();
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await fs.rm(root, { recursive: true, force: true });
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});
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const upstream = () => [git(work, "rev-parse", "origin/master")];
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async function freshClone(name: string) {
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const target = path.join(root, name);
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git(root, "clone", "-q", remote, target);
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return target;
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}
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it("returns nothing when the workspace is fully reproducible from the remote", async () => {
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await write(work, "node_modules/pkg/index.js", "ignored\n");
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expect(await captureRestorePoint({ cwd: work, upstreamCommits: upstream() })).toBeNull();
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});
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it("round-trips unpushed commits, staged and unstaged edits, untracked files, deletions and modes", async () => {
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git(work, "checkout", "-q", "-b", "feature");
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await write(work, "src/app.ts", "export const value = 2;\n");
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git(work, "commit", "-q", "-am", "unpushed one");
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await write(work, "src/feature.ts", "export const feature = true;\n");
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git(work, "add", "src/feature.ts");
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git(work, "commit", "-q", "-m", "unpushed two");
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await write(work, "src/app.ts", "export const value = 3;\n");
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git(work, "add", "src/app.ts");
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await write(work, "src/app.ts", "export const value = 4;\n");
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await fs.rm(path.join(work, "src/remove-me.ts"));
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await write(work, "notes/todo.md", "untracked work\n");
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await write(work, "scripts/run.sh", "#!/bin/sh\necho hi\n", 0o755);
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await write(work, "private/key.txt", "secret-ish\n", 0o600);
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await fs.symlink("../README.md", path.join(work, "notes/readme-link"));
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await write(work, "node_modules/pkg/index.js", "ignored\n");
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await write(work, ".env", "TOKEN=ignored\n");
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await write(work, "config/.env.local", "TOKEN=untracked-env\n");
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const captured = await captureRestorePoint({ cwd: work, upstreamCommits: upstream() });
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expect(captured).not.toBeNull();
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const { payload, manifest } = captured!;
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expect(manifest.head).toBe(git(work, "rev-parse", "HEAD"));
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expect(manifest.prerequisites).toEqual(upstream());
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expect(await currentRestorePointSnapshot(work)).toEqual({ head: manifest.head, index: manifest.index, worktree: manifest.worktree, modes: manifest.modes });
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const restored = await freshClone("restored");
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expect(() => git(restored, "cat-file", "-e", `${manifest.head}^{commit}`)).toThrow();
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const imported = await importRestorePoint({ repositoryCwd: restored, payload });
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git(restored, "checkout", "-q", "-b", "feature", imported.head);
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await applyRestorePoint({ cwd: restored, manifest: imported });
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expect(await read(restored, "src/app.ts")).toBe("export const value = 4;\n");
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expect(git(restored, "show", ":src/app.ts")).toBe("export const value = 3;");
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expect(await read(restored, "src/feature.ts")).toBe("export const feature = true;\n");
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await expect(fs.access(path.join(restored, "src/remove-me.ts"))).rejects.toMatchObject({ code: "ENOENT" });
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expect(await read(restored, "notes/todo.md")).toBe("untracked work\n");
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expect(git(restored, "status", "--porcelain", "--", "notes/todo.md")).toBe("?? notes/todo.md");
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expect((await fs.stat(path.join(restored, "scripts/run.sh"))).mode & 0o777).toBe(0o755);
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expect((await fs.stat(path.join(restored, "private/key.txt"))).mode & 0o777).toBe(0o600);
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expect(await fs.readlink(path.join(restored, "notes/readme-link"))).toBe("../README.md");
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await expect(fs.access(path.join(restored, "node_modules"))).rejects.toMatchObject({ code: "ENOENT" });
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await expect(fs.access(path.join(restored, ".env"))).rejects.toMatchObject({ code: "ENOENT" });
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await expect(fs.access(path.join(restored, "config/.env.local"))).rejects.toMatchObject({ code: "ENOENT" });
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});
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it("captures edits to tracked environment files", async () => {
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await write(work, ".env.example", "TOKEN=\n");
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git(work, "add", ".env.example");
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git(work, "commit", "-q", "-m", "example env");
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git(work, "push", "-q", "origin", "HEAD:master");
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git(work, "fetch", "-q");
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await write(work, ".env.example", "TOKEN=\nOTHER=\n");
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const captured = await captureRestorePoint({ cwd: work, upstreamCommits: upstream() });
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expect(captured).not.toBeNull();
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const restored = await freshClone("restored");
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await importRestorePoint({ repositoryCwd: restored, payload: captured!.payload });
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await applyRestorePoint({ cwd: restored, manifest: captured!.manifest });
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expect(await read(restored, ".env.example")).toBe("TOKEN=\nOTHER=\n");
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});
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it("applies safeguards and modes to staged files whose contents match the index", async () => {
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await write(work, "private/staged.txt", "staged secret\n", 0o600);
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git(work, "add", "private/staged.txt");
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await expect(captureRestorePoint({ cwd: work, upstreamCommits: upstream(), limits: { maxFiles: 0 } }))
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.rejects.toMatchObject({ reason: "restore_point_too_large" });
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const captured = await captureRestorePoint({ cwd: work, upstreamCommits: upstream() });
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expect(captured!.manifest.modes).toEqual([{ path: "private/staged.txt", mode: 0o600 }]);
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const restored = await freshClone("restored");
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await importRestorePoint({ repositoryCwd: restored, payload: captured!.payload });
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await applyRestorePoint({ cwd: restored, manifest: captured!.manifest });
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expect((await fs.stat(path.join(restored, "private/staged.txt"))).mode & 0o777).toBe(0o600);
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expect(git(restored, "status", "--porcelain", "--", "private/staged.txt")).toBe("A private/staged.txt");
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});
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it("detects permission-only changes after capture", async () => {
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await write(work, "private/key.txt", "secret\n", 0o600);
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const before = await currentRestorePointSnapshot(work);
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await fs.chmod(path.join(work, "private/key.txt"), 0o644);
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expect(await currentRestorePointSnapshot(work)).not.toEqual(before);
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});
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it("restores exact bytes when the repository configures a diff text conversion", async () => {
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await write(work, ".gitattributes", "*.txt diff=upper\n");
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await write(work, "notes.txt", "original\n");
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git(work, "add", ".gitattributes", "notes.txt");
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git(work, "commit", "-q", "-m", "textconv");
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git(work, "push", "-q", "origin", "HEAD:master");
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git(work, "fetch", "-q");
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await write(work, "notes.txt", "changed contents\n");
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const captured = await captureRestorePoint({ cwd: work, upstreamCommits: upstream() });
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const restored = await freshClone("restored");
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git(restored, "config", "diff.upper.textconv", "tr a-z A-Z <");
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await importRestorePoint({ repositoryCwd: restored, payload: captured!.payload });
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await applyRestorePoint({ cwd: restored, manifest: captured!.manifest });
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expect(await read(restored, "notes.txt")).toBe("changed contents\n");
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});
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it("captures a small edit despite a long ordinary history", async () => {
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for (let index = 0; index < 60; index += 1) {
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await write(work, "log.txt", `${index}\n`);
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git(work, "commit", "-q", "-am", `history ${index}`, "--allow-empty");
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}
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git(work, "add", "-A");
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git(work, "commit", "-q", "-m", "tracked log", "--allow-empty");
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git(work, "push", "-q", "origin", "HEAD:master");
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git(work, "fetch", "-q");
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await write(work, "notes/todo.md", "small edit\n");
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const captured = await captureRestorePoint({ cwd: work, upstreamCommits: upstream() });
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expect(captured!.manifest.preserved).toEqual([]);
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expect(captured!.manifest.worktree).not.toBeNull();
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});
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it("refuses to capture when history-only commits exceed the supported limit", async () => {
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git(work, "checkout", "-q", "-b", "feature");
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for (let index = 0; index < 51; index += 1) {
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await write(work, `scratch/${index}.txt`, `${index}\n`);
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git(work, "add", "-A");
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git(work, "commit", "-q", "-m", `scratch ${index}`);
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git(work, "reset", "-q", "--hard", "origin/master");
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}
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await expect(captureRestorePoint({ cwd: work, upstreamCommits: upstream() }))
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.rejects.toMatchObject({ reason: "restore_point_history_too_large" });
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});
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it("keeps capture objects out of the repository", async () => {
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await write(work, "notes/todo.md", "untracked work\n");
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const before = git(work, "count-objects", "-v");
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expect(await captureRestorePoint({ cwd: work, upstreamCommits: upstream() })).not.toBeNull();
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expect(git(work, "count-objects", "-v")).toBe(before);
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expect(git(work, "fsck", "--no-reflogs", "--unreachable", "--no-progress")).toBe("");
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});
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it("produces the same snapshot ids for unchanged contents and different ids after a change", async () => {
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await write(work, "notes/todo.md", "one\n");
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const first = await currentRestorePointSnapshot(work);
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expect(await currentRestorePointSnapshot(work)).toEqual(first);
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await write(work, "notes/todo.md", "two\n");
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expect(await currentRestorePointSnapshot(work)).not.toEqual(first);
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});
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it("bundles commits only reachable from history that is not on any branch", async () => {
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git(work, "checkout", "-q", "-b", "feature");
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await write(work, "src/lost.ts", "export const lost = true;\n");
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git(work, "add", "src/lost.ts");
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git(work, "commit", "-q", "-m", "rewritten away");
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const lost = git(work, "rev-parse", "HEAD");
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git(work, "reset", "-q", "--hard", "origin/master");
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const captured = await captureRestorePoint({ cwd: work, upstreamCommits: upstream() });
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expect(captured!.manifest.preserved).toEqual([lost]);
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const restored = await freshClone("restored");
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await importRestorePoint({ repositoryCwd: restored, payload: captured!.payload });
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expect(git(restored, "cat-file", "-t", lost)).toBe("commit");
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expect(git(restored, "for-each-ref", "refs/paperclip-restore-import/")).toBe("");
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});
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it("skips a nested untracked repository", async () => {
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git(root, "init", "-q", path.join(work, "vendor/other"));
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await write(work, "vendor/other/file.txt", "x\n");
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await expect(captureRestorePoint({ cwd: work, upstreamCommits: upstream() }))
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.rejects.toMatchObject({ reason: "untracked_nested_repository" });
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});
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it("ignores special files, which git never tracks", async () => {
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execFileSync("mkfifo", [path.join(work, "pipe")]);
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expect(await captureRestorePoint({ cwd: work, upstreamCommits: upstream() })).toBeNull();
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});
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it("skips workspaces over the size limits", async () => {
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await write(work, "big.bin", "x".repeat(2048));
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await expect(captureRestorePoint({ cwd: work, upstreamCommits: upstream(), limits: { maxFileBytes: 1024 } }))
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.rejects.toBeInstanceOf(RestorePointSkip);
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await expect(captureRestorePoint({ cwd: work, upstreamCommits: upstream(), limits: { maxFiles: 0 } }))
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.rejects.toMatchObject({ reason: "restore_point_too_large" });
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});
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it("refuses to import a bundle whose prerequisites are missing", async () => {
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git(work, "checkout", "-q", "-b", "feature");
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await write(work, "src/app.ts", "export const value = 2;\n");
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git(work, "commit", "-q", "-am", "unpushed");
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const captured = await captureRestorePoint({ cwd: work, upstreamCommits: upstream() });
|
|
const empty = path.join(root, "empty");
|
|
git(root, "init", "-q", empty);
|
|
await expect(importRestorePoint({ repositoryCwd: empty, payload: captured!.payload }))
|
|
.rejects.toMatchObject({ reason: "bundle_prerequisites_missing" });
|
|
});
|
|
|
|
it("refuses to apply onto a different commit", async () => {
|
|
await write(work, "notes/todo.md", "work\n");
|
|
const captured = await captureRestorePoint({ cwd: work, upstreamCommits: upstream() });
|
|
const restored = await freshClone("restored");
|
|
await write(restored, "other.txt", "x\n");
|
|
git(restored, "add", "other.txt");
|
|
git(restored, "commit", "-q", "-m", "diverged");
|
|
await expect(applyRestorePoint({ cwd: restored, manifest: captured!.manifest }))
|
|
.rejects.toMatchObject({ reason: "head_mismatch" });
|
|
});
|
|
|
|
describe("encryption", () => {
|
|
const payload = Buffer.from("restore point payload");
|
|
|
|
it("round-trips and binds to the restore point identity", async () => {
|
|
const sealed = await sealRestorePoint(payload, identity);
|
|
expect(sealed.ciphertext.includes(payload)).toBe(false);
|
|
expect(await openRestorePoint({ ...sealed, identity })).toEqual(payload);
|
|
await expect(openRestorePoint({ ...sealed, identity: { ...identity, workspaceId: "workspace-2" } }))
|
|
.rejects.toMatchObject({ reason: "key_identity_mismatch" });
|
|
});
|
|
|
|
it("rejects tampered, truncated or rehashed ciphertext", async () => {
|
|
const sealed = await sealRestorePoint(payload, identity);
|
|
const flipped = Buffer.from(sealed.ciphertext);
|
|
flipped[flipped.length - 20] ^= 1;
|
|
await expect(openRestorePoint({ ...sealed, ciphertext: flipped, identity }))
|
|
.rejects.toMatchObject({ reason: "ciphertext_hash_mismatch" });
|
|
const { createHash } = await import("node:crypto");
|
|
await expect(openRestorePoint({ ...sealed, ciphertext: flipped, sha256: createHash("sha256").update(flipped).digest("hex"), identity }))
|
|
.rejects.toMatchObject({ reason: "ciphertext_authentication_failed" });
|
|
const truncated = sealed.ciphertext.subarray(0, 10);
|
|
await expect(openRestorePoint({ ...sealed, ciphertext: truncated, sha256: createHash("sha256").update(truncated).digest("hex"), identity }))
|
|
.rejects.toBeInstanceOf(RestorePointRestoreFailure);
|
|
});
|
|
|
|
it("cannot be opened with a different master key", async () => {
|
|
const sealed = await sealRestorePoint(payload, identity);
|
|
vi.stubEnv("PAPERCLIP_SECRETS_MASTER_KEY", "42".repeat(32));
|
|
await expect(openRestorePoint({ ...sealed, identity })).rejects.toThrow();
|
|
});
|
|
});
|
|
});
|