Commit Graph
1806 Commits
Author SHA1 Message Date
DottaandPaperclip f4cdc7b231 fix: recover transient workspace bootstrap scans (#13481)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The control plane prepares task workspaces before it starts an
agent.
> - Workspace preparation reads Git state so it can preserve edits and
exclude private files.
> - A failed scan was treated as a non-Git folder and lost its actual
failure code.
> - The resulting generic setup failure could not recover, even when the
cause was temporary.
> - This pull request keeps the cause and uses the existing bounded
retry schedule before provider startup.
> - Tasks can recover without human intervention, while permanent
failures and exhausted retries stop with useful guidance.

## Linked Issues or Issue Description

**What happened?**

A Git scan error during managed repository preparation became
`Configured repository folder is not a Git checkout`, followed by
generic `setup_failed`. The agent never started. Generic recovery could
not distinguish a temporary timeout from a bad workspace configuration.

**Expected behavior**

Keep the closed scan error code. Retry temporary timeouts and queue
saturation under the existing shared budget. Preserve edits, exclusions,
ownership, and pause gates. Stop permanent failures and exhausted
retries with a specific explanation. Do not replay historical generic
setup failures.

**Steps to reproduce**

1. Configure a task project with a local Git source that must be copied
into its managed repositories.
2. Make the ignored-file scan exceed its timeout before the agent
starts.
3. Before this fix, the snapshot returns null and the run ends as
non-retryable `setup_failed`.
4. Use the disposable browser fixture in
`tests/e2e/workspace-bootstrap/README.md` to inject real timeouts and
test the full recovery path.

**Paperclip version or commit**

Reproduced against `4510bf7c9e2fcbeb043445850928b5dcb79908ca`.

**Deployment mode**

Built from source. The defect is in core workspace setup, not a specific
model provider.

Related work: Refs #13442 (managed repository preparation), Refs #11572
(bounded Git scheduler), Refs #12997 (separate adapter startup retry
work), Refs #13469 (separate terminal-workspace scan performance work).

## What Changed

- Return the non-Git fallback only for repository discovery. Propagate
failed scans of a confirmed repository.
- Replace full ignored status output with an ignored-only directory
listing. Preserve NUL-delimited paths and exclusions.
- Preserve typed, sanitized scan errors through workspace preparation
and persist pre-provider failure details.
- Retry only timeouts and queue saturation, using the existing durable
two-retry budget and issue gates. Prevent generic recovery from adding
another budget.
- Show workspace-specific failure copy and actionable exhausted-recovery
notices.
- Add red-green unit tests, real-database restart and retry-boundary
tests, and opt-in browser acceptance fixtures with real Git subprocess
timeouts.
- Document the recovery contract and browser verification procedure.

## Verification

- Red: injected scan failures returned null instead of rejecting; setup
lost the timeout code; task-thread and recovery notices had generic
copy.
- Green: 119 focused adapter/backend tests, 20 recovery-boundary tests,
and 136 task-thread tests.
- `pnpm -r typecheck` — passed.
- `pnpm build` — passed on the final production code.
- `pnpm check:token-gates` — passed.
- The initial local `pnpm test:run` overlapped source edits and was
interrupted after two late-added assertions saw pre-fix behavior; it is
not counted as a green full run. A fresh final-head run passed all 229
tests across the six affected adapter/backend/UI suites. The clean
latest-head CI full test matrix passed: all five general-server shards,
all five serialized-server shards, and all three general-workspace
shards.
- Latest-head CI also passed all three browser shards and their
aggregate gate, typecheck and release registry, build, runner
verification, canary dry run, policy, Docker context integrity, and
security gates. Greptile: 5/5, with the review thread resolved.
- Browser: created a task in a disposable instance. A real Git timeout
scheduled recovery, the next run completed through the run-scoped API
without manual Retry, and Done survived reload. The deterministic
process worker checked preserved source edits and excluded private
files; no model calls were made.
- `WORKSPACE_BOOTSTRAP_TEST_URL=<disposable-instance-url> pnpm exec
playwright test --config
tests/e2e/workspace-bootstrap/playwright.config.ts` — 2 passed (3.6
minutes). The persistent case made exactly three failed attempts, never
started the worker, showed the cause-specific notice, stayed stopped for
another scheduler tick, and retained Blocked after reload.
- Extra red-green coverage: 50 recovery tests passed after fixing an
exhausted-bootstrap classification that incorrectly implied unknown
provider actions. Missing or uncertain evidence still retains the safety
hold.
- Verified the documented Git executable override during repository
seeding.

## Risks

- A confirmed repository scan failure now fails closed instead of
falling back to directory sync. This prevents unfiltered copying but
makes previously hidden errors visible.
- Temporary host problems can create up to two additional setup
attempts, 30 seconds apart. Permanent scan errors do not auto-retry.
Generic recovery cannot reset this budget.
- The durable retry path still enforces ownership, pause, and work
eligibility. Integration tests cover restart, duplicate promotion,
pause, exhaustion, and non-retryable categories.
- No schema migration, new runtime setting, new retry budget, production
deployment, or historical task replay.

## Model Used

OpenAI Codex, GPT-5-based coding agent, with reasoning, repository
tools, shell execution, and browser testing. The exact deployment model
ID and context-window size are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-15 12:37:21 -05:00
cceeb0aa66 test(runner): add everyday workflow evaluation harness (#13474)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The native runner must support project work, delegation, hiring, and
service access.
> - Browser tests exposed lost connection access, rejected helper
events, and stalled recovery.
> - Some eval failures also came from incorrect fixtures and decision
controls.
> - This pull request fixes those paths and adds eight everyday workflow
stories.
> - The tests retain observed failures and verify delivered files
independently.
> - The benefit is repeatable evidence for common user tasks and their
remaining gaps.

## Linked Issues or Issue Description

Related work: #13404 contains earlier workflow fixes. #13300 and #13470
changed the CI contracts used by the harness security tests. Merged
companion:
[paperclip-evals#22](https://github.com/paperclipai/paperclip-evals/pull/22).

**What happened?**

Native ACPX sessions did not receive the assigned connection gateway.
Codex helper events could arrive before their spawn receipt and fail
thread validation. A parent continuation could take a shared workspace
before its child retried. A failed native continuation could leave the
task status without a clear recovery blocker. The eval harness also
confused tool approvals with new connection requests and could reject a
valid delegated download.

**Expected behavior**

Keep assigned gateway access and its approval checks. Verify helper
lineage before accepting helper progress. Let a waiting child proceed
before automatic parent recovery. Preserve a failed task's recovery
ownership. Grade the actual requested workflow and its delivered files.

**Steps to reproduce**

Run the everyday workflow suite with the native Codex and Claude
profiles. Exercise service approval, connection refusal, delegated
project work, and teammate reuse. The commands and case requirements are
in `tests/runner-e2e/EVERYDAY-WORKFLOWS.md`. Use `pnpm
test:runner-recovery` for controlled crash and replacement cases.

## What Changed

- Pass the scoped connection gateway binding through the native ACPX
host and sidecar.
- Recognize Codex helper lineage from parent metadata and spawn
receipts. Verify early helper events with `thread/read`. Keep helper
events separate from root completion authority.
- Guide agents to use persistent hiring, child tasks, dependency
records, and a blocked handoff while waiting for a child.
- Defer automatic parent recovery while a child has an active execution
path in the same shared workspace. Allow parent recovery when the child
needs review.
- Record Blocked status and recovery evidence when a failed native
continuation needs reconciliation, including existing active or
escalated incidents. Preserve their owner and retry budget.
- Add eight browser-driven workflow cases. Use real decision controls,
explicit child feedback delivery, managed hiring credentials, and
independent ZIP checks inside a bounded Docker sandbox. Verify sandbox
availability before task creation. Record screenshot SHA-256 at capture.
- Keep runner crash probes in controlled recovery tests. Preserve the
original failure when cleanup also fails.
- Display missing accounting and replay revisions as unavailable. Align
harness security assertions with the approved CI changes.
- Make the channel-rejection browser fixture bind its file after the
send captures its payload. This prevents live refresh from removing the
file before the simulated race.

## Verification

- Full workspace `pnpm -r typecheck` passed after merging current
master.
- Runner E2E typecheck passed. Harness unit tests passed: 216/216.
- Wake-queue database tests passed: 55/55. The two added
existing-incident tests failed before the fix and pass after it.
- Docker artifact calibration passed: 12/12. Host-file and host-loopback
isolation tests failed before the fix and pass after it. Read-only
delivery and output limits are also verified.
- Full `pnpm build` passed. Targeted recovery tests passed: 83/83.
- The channel-rejection browser test passed five consecutive runs after
fixing the fixture race found in CI.
- Local general-server (12,351 tests), UI (6,250), CLI (485), and
workspace package groups passed. The monolithic run stopped at an
unchanged lock-heartbeat fixture race; the isolated workspace group
passed on rerun (shared: 747/747). A separate local serialized run
passed 97 files before two socket errors in the unchanged issue-list
route suite; that suite passed 15/15 on isolated rerun. These local full
commands did not finish uninterrupted; the complete CI matrix below
covers the remaining suites.
- Final head `0fb293733fe307be7e6667ae8f1364077d0c6455`: **34 successful
checks, 2 expected skips**, including every server/workspace shard,
browser shard, native runner verification, build, and typecheck. [Final
CI
run](https://github.com/paperclipai/paperclip/actions/runs/34989136700).
- Greptile reviewed this exact head at **5/5**; all review threads are
resolved. Both Superagent security checks are successful.
- ACPX credential-boundary tests passed: 118/118. Superagent accepted
the runner/sidecar versus provider-environment trace and cleared its
finding.
- The latest paid local campaign on source
`f6a2fdf7ac2af859826a2ae627ff4125a5478529` passed 22/24 cases: Sol 8/8,
Claude 7/8, Mini 7/8. These results predate the merge with current
master.
- The two remaining failures are in `hire-reuse`: Claude exceeded the
attempt deadline during final review; Mini made invalid deliverable tool
calls and remained Blocked.
- Six Daytona cases were not run because the matching immutable runner
image was unavailable. This PR does not claim new remote model results.

## Risks

The changes affect connection admission, helper identity, and recovery
scheduling. Assigned gateway grants and user approval still govern
service calls. The workspace admission gate still exists; the broader
folder-sync design is separate work. Provider behavior can still cause
the two recorded hiring failures. No database migration is required.
Paid cases are opt-in and have bounded attempt deadlines. Project
stories now require Docker and the documented pinned Python image on the
harness host.

## Model Used

OpenAI `gpt-6-astra` performed implementation, diagnosis, and
substantive review. OpenAI `gpt-5.6-luna` assisted with verification, PR
preparation, and review tracking. Both used repository tools and code
execution. Context-window sizes were not recorded.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass (focused checks and
isolated reruns; full-run limitations are documented above)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: OpenAI GPT-5.6 Luna <noreply@openai.com>
Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-15 11:04:16 -05:00
Nicky LeachandPaperclip 9ed55f6931 fix: allow concurrent agent runs on one OpenAI or xAI subscription connection (#13452)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Paperclip starts local command-line sessions and stores provider
credentials through managed connections
> - One OpenAI Codex or xAI Grok subscription connection held a
credential lease for the full agent run
> - A second run then waited for the first run, and concurrent runs
could overwrite a newer credential
> - The write-back must compare fresh credentials while it holds the row
lock
> - This pull request removes the run lease, keeps the revocation guard,
and bounds Codex timestamps against the host clock
> - The benefit is safe concurrent use of one subscription connection
with newest-credential selection

## Linked Issues or Issue Description

**What happened?**

A managed OpenAI Codex or xAI Grok subscription connection held a
credential lease for the full agent run. A second run waited for the
first run to finish. The write-back gate also rejected any row change
before it compared credential freshness.

**Expected behavior**

Concurrent runs should start on one subscription connection. The server
should keep the newest valid credential and reject a credential write
after a person revokes the connection.

**Steps to reproduce**

1. Start two runs that use one OpenAI or xAI subscription connection.
2. Let both provider tools refresh the credential.
3. Finish the runs in either order.
4. Confirm that the newest valid credential remains in the connection.

**Paperclip version or commit**

`ec25bf1e4a81d1729a6d7276e6a486587cff4a0b`

**Deployment mode**

Local dev (`pnpm dev`), built from source.

**Agent adapter(s) involved**

Codex. The server path also covers xAI Grok subscription connections.

**Database mode**

Embedded PGlite for local development, and external Postgres for
deployments.

**Access context**

Both board and agent runs can use managed connections.

**Additional context**

The provider command-line tool refreshes credentials inside the sandbox.
The server copies the result back after the run. Two long runs can still
refresh one token hours apart, so the provider can reject the second
refresh. The server cannot observe that provider call.

## What Changed

- Remove the full-run credential lease for OpenAI Codex and xAI Grok
subscription connections.
- Lock and re-read the connection row before credential write-back.
- Accept only a strictly newer credential, while keeping the connection
revocation guard.
- Reject Codex freshness timestamps more than five minutes ahead of the
host clock.
- Add tests for both completion orders, xAI cleanup, revocation, the
Codex time bound, and agent hiring.
- Update the connection and run-log documentation.

## Verification

- `server/src/__tests__/ai-connections.test.ts` passes with 42 tests.
-
`packages/adapters/codex-local/src/server/codex-auth-merge-decision.test.ts`
covers the five-minute boundary and the one-millisecond overflow.
- `packages/adapters/codex-local/src/server/codex-auth-merge.test.ts`
passes.
- `server/src/__tests__/agent-hire-ai-connections.test.ts` covers OpenAI
and Anthropic.
- The project type check reports no new error in changed files.
- GitHub Actions must pass on this pull request.

## Risks

The write-back now permits concurrent runs, so the provider may reject a
later refresh when both long runs use one token. The server keeps the
revocation guard and rejects future-dated Codex timestamps. No schema
change occurs.

## Model Used

OpenAI Codex, GPT-5. Context window and exact deployment build are not
exposed in this run. The model used tool calls, code inspection, and
test verification.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` /
`Closes: #` / `Refs: #` OR (b) described the issue in-PR following the
relevant issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-15 01:10:54 -07:00
Nicky LeachandPaperclip c276d3fdc3 feat(observability): report terminal run failures to Sentry (#13446)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The server records the state of each agent run.
> - Terminal run failures need clear error tracking for operators.
> - The server did not report terminal `failed` or `timed_out`
transitions to Sentry.
> - This pull request reports each genuine terminal failure transition
with safe diagnostic data.
> - The benefit is faster diagnosis without changing run control flow or
exposing credentials.

## Linked Issues or Issue Description

**What happened?**

The server wrote terminal run failures but did not report them to
Sentry. Operators could not see these failures in error tracking.

**Expected behavior**

The server should report each genuine transition to `failed` or
`timed_out` to Sentry.

**Steps to reproduce**

1. Run an agent task that reaches a terminal failure state.
2. Inspect the Sentry events for the server.
3. Observe that the terminal run failure has no matching Sentry event.

**Paperclip version or commit**

The change targets the current `master` branch.

No public GitHub issue or pull request covers this change.

## What Changed

- Add `captureRunFailure()` as a fail-open Sentry entry point.
- Add `reportRunFailure()` to filter status, resolve the adapter, redact
text, and report the failure.
- Call `reportRunFailure()` beside each of the eight terminal status
writers.
- Report six diagnostic values: the instance host, task identifier, run
identifier, error message, error code, and agent adapter.
- Group events by error code and agent adapter while keeping the
redacted message in the event.
- Report only genuine transitions and avoid duplicate finalization
events.
- Keep Sentry failures outside run control flow.

## Verification

- `pnpm vitest run
server/src/services/__tests__/run-failure-report.test.ts
server/src/__tests__/run-failure-sentry.test.ts
server/src/__tests__/native-session-resumption.test.ts`
- `pnpm vitest run
server/src/services/execution-control-reconciliation.test.ts`
- `pnpm --filter @paperclipai/server typecheck`
- The full continuous-integration suite must run on this pull request.

## Risks

- The report path can add diagnostic events when Sentry is configured.
- The report path returns without action when Sentry is not configured.
- Redaction runs before length limits and before the event leaves the
process.
- The change has no migration and no schema change.

## Model Used

OpenAI Codex, GPT-5, tool use and code review support. The exact context
window and reasoning configuration are not exposed by the runtime.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-14 23:32:15 -07:00
Devin FoleyandPaperclip 667c79ded2 fix: prevent retry-exhaustion events from exhausting attention-feed memory (#13451)
## Thinking Path

> - Paperclip manages AI agents and their work.
> - Its attention feed shows failed runs whose retry budget is
exhausted.
> - Startup retention builds this feed before startup completes.
> - The feed joins every exhaustion event to the full run context, then
removes duplicate runs in JavaScript.
> - Recovery can revisit an exhausted run and append the same event
again. This multiplies the data loaded into memory.
> - This pull request selects one small row per run in PostgreSQL and
makes exhaustion writes idempotent.
> - Existing duplicate events can stay in the database without
multiplying run contexts in server memory.

## Linked Issues or Issue Description

Refs #13367. This fixes the repeated-event allocation path in the
retention feed. Other full-feed sources and sweep cadence remain
separate concerns.

**What happened?**

The attention query loaded one full run context for every matching
exhaustion event. Deduplication ran only after the driver had loaded
those rows. A run with thousands of exhaustion events therefore produced
thousands of context copies. The startup retention sweep can exhaust the
server heap while reading this result.

**Expected behavior**

The query should return one row per exhausted run and only the context
fields that the feed needs. Repeated checks of the same exhausted retry
budget should reuse the original event.

**Steps to reproduce**

1. Create a failed run with a 32 KB context and 2,500 matching
exhaustion events.
2. Build the attention feed, including dismissed items, as startup
retention does.
3. Inspect the database result before JavaScript feed processing. The
old join returns 2,500 copies of the run context.
4. Call bounded retry scheduling repeatedly for a run at its retry
limit. The old writer appends another exhaustion event on every call.

**Paperclip version or commit**

The attention query was introduced by #9380 and is present in stable
`v2026.831.1`. The retention caller is also present in that stable
release. The later recovery callback added by #13075 provides a repeated
path into the exhausted-budget writer. This change is based on
`c0fda8fac` after rebasing onto current master.

Related PR:
[#12162](https://github.com/paperclipai/paperclip/pull/12162) changes
retention cadence and newer-run suppression queries. This change
addresses the exhaustion-event join and duplicate event writes.

## What Changed

- Select the newest company-scoped exhaustion event per run with a
PostgreSQL `DISTINCT ON` subquery before joining run data.
- Project only `issueId` and `taskId` from run context. Preserve JSON
types, fallback behavior, run ordering, company filters, and run/agent
status filters.
- Reuse an exhaustion event for the same run, reason, attempt, and retry
limit under the existing run-row lock. Recognize historical events
without a migration.
- Skip sequence allocation and live publication when a receipt already
exists.
- Document the run-log behavior and add PostgreSQL regression tests.

## Verification

- Focused attention, retry-scheduling, and event-sequencing suites: 72
tests pass on the rebased head `39ce77158`.
- The large-history fixture verifies two database result rows under 4
KB, newest-message selection, task-ID fallback, and company/status
filtering. This assertion runs before feed deduplication.
- Concurrent event tests verify one receipt across two database clients,
reuse of historical receipts, distinct reason/attempt/budget keys, and
stable event sequences.
- Repeated scheduling through a new service instance produces no extra
run-log or live events.
- `pnpm --filter @paperclipai/server exec tsc --noEmit`: passes.
- `pnpm -r typecheck` and `pnpm build`: pass on the rebased head,
including native runner checks.
- Greptile: 5/5 on `39ce77158`, with no review threads.
- [GitHub
CI](https://github.com/paperclipai/paperclip/actions/runs/34929002304):
all 25 workflow jobs pass, including all server/workspace test shards,
serialized server suites, browser tests, typecheck, build, native-runner
verification, and the release dry run. Security checks also pass. The
branch has no merge conflicts.
- `pnpm test:run`: stopped with unrelated failures. Two chat integration
cases passed when rerun separately (2 passed, 993 unselected). Three
skill-cache cases failed on both this branch and the unmodified parent
commit, with `EACCES` during directory rename. The full suite is not
reported as green.

## Risks

- No schema migration or data cleanup is required. The query still scans
matching event history in PostgreSQL; its result size now scales with
exhausted runs.
- This does not bound every source in the attention feed or change
retention scheduling.
- An exhaustion receipt is emitted once per retry decision. Consumers
that observed repeated copies will now receive one event.
- Native source-event replay handling stays on its existing path.
- A deployed application boot has not been verified.

## Model Used

OpenAI GPT-6, used through Codex with reasoning, repository inspection,
code editing, and test execution. The runtime does not expose a more
specific model snapshot or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run the focused tests locally and they pass (full-suite
limitations are documented above)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-14 21:58:34 -07:00
Devin FoleyandPaperclip c0fda8fac5 fix(apps): restore action test picker scrolling and agent eligibility (#13414)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Apps action tests let operators use an agent's permissions.
> - The agent picker must scroll inside the test dialog.
> - Its body portal sits outside the dialog's scroll boundary and blocks
wheel input.
> - Admin permission bypasses also skip agent lifecycle checks.
> - This PR fixes scrolling and rejects agents that cannot receive
assignments.

## Linked Issues or Issue Description

**What happened?**

The Act as picker does not scroll with the mouse wheel inside an action
test dialog. Admins can also see terminated agents.

**Expected behavior**

The list scrolls normally. Terminated and pending-approval agents are
absent. Direct requests cannot test an action as one of those agents.

**Steps to reproduce**

1. Create enough agents to overflow the list. Terminate one agent.
2. Open a connected app's Permissions tab. Click Test on an action.
3. Open Act as and use the mouse wheel over the list.
4. Check whether the terminated agent appears as an admin.

**Paperclip version or commit**

Reproduced on master at f2c5e54dc. Rebased onto d351e08de.

**Deployment mode**

Local dev, built from source. This is a shared Apps bug and does not
require Railway credentials.

Related search result: #9918 added search to a separate secrets picker.
It does not cover this action test dialog. No duplicate action-test
picker PR was found.

## What Changed

- Keep the action tester's agent popover inside its dialog's scroll
boundary.
- Check company membership and the shared agent lifecycle policy before
assignment permission bypasses.
- Reject terminated and pending-approval agents in lists, previews, and
test calls.
- Reuse company-scoped rows during listing to avoid extra per-agent
queries.
- Add route tests for both admin modes and a browser wheel-scroll
regression.

## Verification

- 335 focused tool-access and TestPanel tests passed after rebase. After
the review cleanup, both admin regressions and writable-agent selection
passed again (3 tests).
- The browser regression failed before the fix because wheel input left
scrollTop at zero. It passed after the fix, including search and
selection. It executes no provider tools.
- Full typecheck, build, and token gates passed during implementation.
Token gates passed again after rebase.
- The full test run reported a failure in the GitHub installation
recovery chat test. That test passed in isolation. The full run was
stopped after the failure, so later groups were not completed.

Manual check: open an action's Test dialog, open Act as, scroll, search,
and select an agent. Terminated agents must be absent.

## Risks

The portal change affects only the picker inside the action test dialog.
The browser test covers scrolling and selection. Paused agents remain
eligible under existing assignment rules. There is no migration or
provider policy change.

## Model Used

OpenAI Codex, based on GPT-6, with code execution and browser testing.
The exact serving model ID and context window were not exposed in this
session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-14 21:18:12 -07:00
Nicky LeachandClaude Opus 5 b64469e403 feat(workspaces): add an operator default for isolated execution workspaces (#13444)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - The execution workspace subsystem decides if a task run uses the
shared project checkout or an isolated per-task git worktree
> - The mode comes from the project policy, then the task settings. A
project that stores no policy always falls back to the shared checkout
> - An operator who wants every project to use isolated workspaces must
therefore edit each project one at a time, and must repeat this for each
new project
> - There is no instance-level control, so a fleet operator cannot set
this default at all
> - This pull request adds a managed experimental flag that moves the
default for projects that store no policy of their own
> - The benefit is that an operator sets the workspace default one time,
and every current and future project follows it

## Linked Issues or Issue Description

No public issue exists. The description follows the feature request
template.

**Subsystem affected**

Execution workspaces. The files are
`server/src/services/execution-workspace-policy.ts` and the run dispatch
path in `server/src/services/heartbeat.ts`.

**Problem or motivation**

`resolveExecutionWorkspaceMode` reads only the project policy, the task
settings, and a legacy field. Its last statement returns
`shared_workspace`. A project that stores no policy always gets the
shared project checkout.

An operator has no way to change this default for many projects at the
same time. The operator must edit each project, and must edit each new
project again later. Tasks in one project therefore share one checkout,
and they run one at a time when the environment driver makes the
scheduler serialize them.

**Proposed solution**

Add the managed experimental flag `enableIsolatedWorkspacesByDefault`.
When the flag is on, a project that stores no policy of its own resolves
as if it selected isolated workspaces. A project that stores a policy
keeps that policy.

The new helper substitutes a project policy. It does not move the last
statement of `resolveExecutionWorkspaceMode`. Two behaviors make this
necessary:

- A task that has no project must keep its current behavior. An isolated
workspace needs a repository to cut a worktree from.
`isUnrunnableWorktreeCombo` blocks an isolated task that has no
`projectId` and no `projectWorkspaceId`. A moved fallback would resolve
isolated for project-less tasks, such as agent chat, and stop them
before dispatch.
- The mode and the strategy must agree.
`buildExecutionWorkspaceAdapterConfig` supplies the default
`git_worktree` strategy only when one layer asserts workspace control. A
moved fallback would leave isolated mode with a `project_primary`
strategy.

**Alternatives considered**

- Change the last statement of `resolveExecutionWorkspaceMode` to
`isolated_workspace`. This is one line, but it changes the default for
every deployment. It is also not gated, so it would apply where isolated
workspaces are off.
- Write the policy to each project row with a script. This does not
cover new projects, and it does not cover new instances.
- Add an instance defaults section to the managed-config document. This
needs a new document key, new validation, and new delivery code. A
boolean flag reuses the delivery machinery that exists today.

**Roadmap alignment**

`ROADMAP.md` does not list execution workspace defaults. This change
adds an operator control to an existing capability. It does not add a
new capability.

**Additional context**

The flag is `tier: "managed"`. A cloud operator can therefore deliver it
with the managed-config machinery that exists today. No new delivery
code is needed.

## What Changed

- Add `enableIsolatedWorkspacesByDefault` to the feature catalog with
`tier: "managed"`. Both defaults are off.
- Add the flag to the experimental settings schema, the type, and both
branches of `normalizeExperimentalSettings`.
- Add `applyDefaultIsolatedExecutionWorkspacePolicy` to
`execution-workspace-policy.ts`. It substitutes `{ enabled: true,
defaultMode: "isolated_workspace" }` only when the flag is on, the task
has a project, and the project stores no policy.
- Apply the helper in the run dispatch path in `heartbeat.ts`, after the
existing `gateProjectExecutionWorkspacePolicy` call. The `hasProject`
argument reads the resolved project row, not the raw `projectId` of the
task.
- Gate the new flag behind `enableIsolatedWorkspaces` at the call site.
The new flag does nothing on its own.
- Add a toggle card to the instance experimental settings page. The card
shows only when isolated workspaces are on.
- Add eight tests for the new helper.

## Verification

Commands:

```
pnpm --filter @paperclipai/shared typecheck
pnpm --filter @paperclipai/ui typecheck
cd server && ../node_modules/.bin/tsc --noEmit
```

The server typecheck script also builds a Rust binary. I ran `tsc`
directly because this machine has no `cargo`. The server package reports
no type errors.

Tests:

```
./node_modules/.bin/vitest run \
  server/src/__tests__/execution-workspace-policy.test.ts \
  server/src/__tests__/instance-settings-service.test.ts \
  server/src/__tests__/instance-settings-cloud-defaults.test.ts \
  server/src/__tests__/instance-settings-managed-overlay.test.ts \
  server/src/__tests__/instance-settings-routes.test.ts \
  server/src/__tests__/managed-config.test.ts \
  server/src/__tests__/heartbeat-workspace-busy.test.ts \
  server/src/__tests__/heartbeat-workspace-session.test.ts \
  server/src/__tests__/heartbeat-workspace-ready-comment.test.ts \
  server/src/__tests__/execution-workspaces-service.test.ts \
  server/src/__tests__/issue-runtime-workspace-binding.test.ts \
  server/src/__tests__/run-trust-preset.test.ts \
  packages/shared/src/feature-catalog.test.ts \
  packages/shared/src/settings-visibility.test.ts \
  packages/shared/src/validators/instance.test.ts \
  ui/src/pages/InstanceExperimentalSettings.test.tsx \
  ui/src/components/Sidebar.test.tsx
```

All of these files pass. The new tests cover each of these cases:

- The helper substitutes an isolated policy for a project that stores
none.
- The helper changes nothing while the flag is off.
- The helper changes nothing for a task that has no project.
- The helper keeps a stored policy, including a policy with `enabled:
false`.
- The resolver returns `isolated_workspace` for an unpolicied project.
- An explicit task setting still wins over the operator default.
- The substituted policy produces the `git_worktree` strategy.
- A project-less task does not become an unrunnable worktree.

To confirm the behavior by hand:

1. Turn on Isolated Workspaces, then turn on Use Isolated Workspaces By
Default.
2. Open a project that has no execution workspace policy.
3. Start a task in that project.
4. The run gets its own worktree. Tasks in that project no longer wait
for each other.

## Risks

Low to medium. The details:

- The flag defaults to off, and it is inert unless
`enableIsolatedWorkspaces` is also on. An instance that does not turn on
both flags sees no change.
- A project that stores a policy keeps it. This includes a policy with
`enabled: false`, which the helper reads as a decision to stay on the
shared checkout.
- When an operator turns the flag on, the workspace configuration
fingerprint changes for projects that store no policy. Their next run
creates a new workspace. This is correct, because the mode did change,
but the first run after the change does more setup work.
- A task that is in flight when the flag changes resumes with a
different workspace path than the path its session remembers. An
operator should let current runs finish before turning the flag on.
- Isolated workspaces use more disk, because each task gets its own
worktree.

## Model Used

Claude Opus 5 (`claude-opus-5`) in Claude Code, with extended thinking
and tool use. The model read the repository, made the change, and ran
the typechecks and tests above.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5 <noreply@anthropic.com>
2026-09-14 20:59:56 -07:00
Nicky LeachandPaperclip ee81cee76d fix: allow concurrent agent runs on one Anthropic subscription connection (#13445)
## Thinking Path

> - Paperclip manages AI agents and their work.
> - Agent runs use provider connections and subscription credentials.
> - File-backed subscriptions need a lease while a run writes new
credentials.
> - Anthropic subscriptions pass a token and do not write a credential
file.
> - The current lease blocks concurrent Anthropic runs without
protecting shared state.
> - This pull request limits the lease to file-backed subscriptions and
tests both paths.
> - The result lets Anthropic runs share one connection safely while
file-backed credentials remain serialized.

## Linked Issues or Issue Description

**What existing behavior does this improve?**

This change improves concurrent use of one subscription connection.
Anthropic runs no longer wait for a lease that protects no shared file.

**Subsystem affected**

server/ — REST API and orchestration services, with related server tests
and connection documentation.

**Current behavior**

The server takes a connection lease for every subscription invocation.
The lease blocks a second Anthropic run while the first runtime remains
open.

**Proposed behavior**

The server takes the lease only when the subscription writes a provider
authentication file back to the grant. Anthropic runs can proceed at the
same time.

**Reason and benefit**

Anthropic passes its token through an environment variable and writes no
file. Removing this unnecessary wait improves concurrency and preserves
credential safety for OpenAI and xAI.

**Breaking changes**

None. OpenAI and xAI keep the existing lease and retry behavior.

## What Changed

- Limit the AI credential lease to subscriptions that write a provider
authentication file.
- Add coverage for concurrent Anthropic runs and hired-agent runs.
- Keep the existing OpenAI contention assertions as a sensitivity
control.
- Update the AI connection documentation to describe the lease boundary.

## Verification

- Run `server/src/__tests__/ai-connections.test.ts`.
- Run `server/src/__tests__/agent-hire-ai-connections.test.ts`.
- Run
`server/src/__tests__/heartbeat-ai-subscription-contention.test.ts`.
- Run the server type check.
- Review the pull request checks after GitHub starts continuous
integration.

## Risks

The main risk is an incorrect provider classification. The write-back
condition remains unchanged, and OpenAI contention tests keep the
file-backed lease behavior under test. No schema or API contract changes
occur.

## Model Used

OpenAI GPT-5. Exact runtime model ID and context window are not exposed
in this execution. The model used tool calls, shell commands, and GitHub
operations.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-14 20:53:56 -07:00
Devin FoleyandPaperclip 52d120f68d fix(release): wait 30 minutes for npm to expose a published version (#13436)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Every release publishes a batch of npm packages and then waits for
each one to become visible before continuing
> - npm accepts a publish immediately but exposes it later, so that wait
exists to keep a release from continuing past a package nobody can
install yet
> - Today that wait was too short twice in a row, and each timeout
aborted the release with the batch half-published
> - Version numbers are derived from what is already on npm, so every
retry moves to a new number and meets the same lag
> - Two canary attempts burned two versions this way and shipped nothing
> - This pull request raises the per-package budget from ten minutes to
thirty
> - The benefit is that ordinary registry lag costs waiting instead of a
failed, half-published release

## Linked Issues or Issue Description

No existing issue. The problem, in the bug report format:

**What happened**
`publish_canary` failed twice in a row with the batch half-published:

```
Warning: npm accepted @paperclipai/server@2026.914.0-canary.2, but the version did not become registry-visible.
Error: stopping release: npm did not publish and expose @paperclipai/server@2026.914.0-canary.2
```

The version was accepted at 17:49:09 and became visible at 18:04:29 —
about five minutes after the poll gave up. `shared`, `db` and
`adapter-utils` published at that version; `server`, `paperclip-runner`
and the root package did not.

**Expected behavior**
Ordinary registry propagation delay costs the release some waiting, not
a failure. A package that becomes visible after 15 minutes must not
abort the batch because of the old 10-minute wait. Longer registry
outages can still leave a partial batch.

**Steps to reproduce**
1. Publish any channel while npm is propagating slowly.
2. A package takes longer than `NPM_PUBLISH_VERIFY_ATTEMPTS *
NPM_PUBLISH_VERIFY_DELAY_SECONDS` to become visible.
3. The release aborts, that version is half-published, and the retry
picks a new version number and meets the same lag.

**Paperclip version or commit**
Present on master. Observed on 2026-09-14 across canary runs in workflow
run 34869494325.

## What Changed

- Increase npm visibility checks from 60 to 180, retaining the 10-second
delay: about 30 minutes per package.
- Increase canary, nightly, beta, and stable publish job timeouts from
90 to 150 minutes.
- Add offline regression tests using the workflow's actual settings.
They cover the observed 15-minute 20-second delay, immediate visibility,
exhausted retries, and job timeout sizing.
- Load the access router in test setup so its cold transform does not
consume the first permission test's 10-second timeout. The permission
assertions are unchanged.

## Verification

- `node --test scripts/release-lib.test.mjs`: 14 passed.
- `pnpm run test:release-registry`: 129 passed.
- `pnpm exec vitest run
server/src/__tests__/access-routes-permissions-upgrade.test.ts`: 3
passed.
- Regression proof in temporary fixtures: restoring 60 attempts fails
the observed-delay test; restoring 90-minute jobs fails the
timeout-budget test.
- [CI run
34916632804](https://github.com/paperclipai/paperclip/actions/runs/34916632804):
all jobs passed, including typecheck/release registry, build, all
general and serialized server shards, browser tests, runner
verification, and canary dry run. The PR has 31 successful checks and
two expected Storybook skips at `a27f5e896`.
- [Previously failing serialized
shard](https://github.com/paperclipai/paperclip/actions/runs/34916632804/job/104215809616):
all three access-route permission tests passed in CI after preloading
the router.
- Greptile's final review is 5/5 with no outstanding findings. Both
review threads are resolved.
- Local limits: `pnpm -r typecheck` and `pnpm build` stop at the runner
package because this machine has no Rust `cargo` executable. The
duplicate full local `pnpm test:run` was interrupted while the complete
CI matrix ran. Targeted local results are listed above; full validation
is from CI.

The previous CI failures were unrelated to npm propagation:

- [PR
review](https://github.com/paperclipai/paperclip/actions/runs/34891770396)
required a test file for this fix.
- [Serialized server shard
3](https://github.com/paperclipai/paperclip/actions/runs/34891773736/job/104136392196)
timed out in the first access-route permission test at 10 seconds. The
other two tests in that file passed.
- The canary dry run passed in that same CI run.

## Risks

Low risk. Production behavior changes only in release waiting budgets.

- Polling exits as soon as npm exposes the version, so healthy publishes
do not wait longer.
- An unavailable version now takes about 30 minutes to report. Polls
remain bounded and still fail the release on exhaustion.
- The 150-minute jobs leave roughly 30 minutes for setup/build plus four
full polling windows. npm command runtime and later release steps also
consume that budget; a broader outage can still interrupt a batch.
- The permission-test change moves module loading into a bounded setup
hook; it does not relax authorization assertions.
- No schema changes or operational migrations.

## Model Used

- Claude Fable 5 (`claude-fable-5`), 1M context, extended thinking, run
through Claude Code with tool use and code execution.

- OpenAI GPT-6 (Codex), with reasoning, tool use, and code execution,
for the CI follow-up. Context-window size is not exposed in this
session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass — targeted checks listed
above; full validation passed in CI
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes —
workflow comments and verification details
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-14 20:16:29 -07:00
DottaandPaperclip a2e7ffdc34 fix(runtime): validate sandbox paths and preserve live controller leases (#13432)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Agents can run in remote sandboxes.
> - Connection checks must use the selected execution target.
> - Recovery must respect the controller that owns an active run.
> - A host path or PID does not describe a remote sandbox.
> - This pull request checks sandbox paths on the target and preserves
live controller leases.

## Linked Issues or Issue Description

**What happened?**

Selecting an AI account for a sandbox agent could fail because the
Claude ACP environment check tried to create the sandbox directory on
the Paperclip host. The recovery sweep could also interrupt a sandbox
run while its controller lease was still valid. It treated a PID absent
from the local host as proof that the run had stopped.

**Expected behavior**

ACP checks directories on the selected execution target. Recovery leaves
a run with a live controller lease alone. Its final database write
rejects a stale snapshot after renewal, a claim, a controller change, or
a runtime change.

**Steps to reproduce**

1. Test a Claude ACP sandbox agent with a directory that cannot be
created on the host. The check fails before this fix.
2. Give a running sandbox task a valid controller lease and a PID absent
from the host. Run the stale-lock sweep without an in-memory handle. The
sweep interrupts the run before this fix.
3. Renew or replace the controller between the sweep's read and write.
The old snapshot must not end that controller's run.

**Paperclip version or commit**

Rebased onto `origin/master` at
`0e9b24c8216171c26c8358ba387d77858e02c7a9`. All seven regression cases
still fail against this base.

Refs #13438, which supplies the managed hiring and task-connection
behavior, and #13433, which preserves non-assignee subscription comment
wakes. This PR preserves both upstream changes and addresses the two
remaining sandbox failures.

## What Changed

- Resolve and create Claude ACP test directories through the
execution-target helpers.
- Preserve active legacy controller leases during stale-lock recovery,
including finalization after a task becomes terminal.
- Recheck the controller, lease, runtime mode, and native ownership in
the terminal database write.
- Add two sandbox-directory cases and five database-backed
controller-lease cases.
- Document the target used for ACP directory checks.

## Verification

- Red: all seven new cases fail against `0e9b24c82` without these two
implementation changes.
- Before the final upstream sync, 192 focused tests passed. Full `pnpm
test:run` coverage completed using the repository's group/shard runner:
all general server and workspace groups passed, and all 147 serialized
server suites passed across the initial run and isolated continuations.
Five cold-import timeout suites passed with
`--experimental.fsModuleCache`; their assertions and deadlines were
unchanged.
- The hiring routes, default-selection service, and upstream hiring
tests match `origin/master` exactly. The two remaining fixes are
unchanged by the final rebase.
- On final head `bd28d5cefbdf7084acc3759199cd9661907e7a26`, all 372
focused tests pass across 16 suites covering both upstream changes and
these fixes. Two timeouts in the combined run (database setup and an
existing ACP case) pass in isolated reruns with fresh test homes and
temporary directories. `pnpm -r typecheck` and `pnpm build` also pass on
this head.
- All 32 active checks pass on final head `bd28d5cef`, including the
full test matrix and browser shards, in [CI run
34904204849](https://github.com/paperclipai/paperclip/actions/runs/34904204849).
Two Storybook checks are skipped by path filters.
- Greptile reviewed final head `bd28d5cef` at 5/5 with no findings or
unresolved review threads.

## Risks

- A failed remote directory check still blocks connection adoption.
- A live controller retains finalization authority after its task
becomes terminal. Cleanup waits for ownership to expire and must pass
the final ownership check.
- No schema or credential-storage changes.

## Model Used

OpenAI GPT-6 in Codex, with reasoning, repository inspection, code
execution, and API tools. The exact serving model ID and context-window
size are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-14 22:13:57 -05:00
DottaandPaperclip 8f1905d34d fix: provision all project repositories for local and sandbox tasks (#13442)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Projects can now attach several source repositories.
> - Task preparation still treated these sources as alternative
workspaces.
> - Sandbox sync preserved Git history only for the selected repository.
> - A task needs every attached repository to complete work across the
project.
> - This pull request prepares all distinct project repositories and
preserves their separate Git histories through sandbox restore.

## Linked Issues or Issue Description

**What happened?**

A user reported that a project with two repositories received only the
first repository in Daytona. Repository-only project rows also reached
the agent with null local paths. Managed checkouts with matching
repository names could resolve to the same directory.

**Expected behavior**

Local and sandbox tasks receive every distinct repository attached to
their project. Repository-only sources work without preconfigured local
folders. Each repository keeps its own Git history and working files.

**Steps to reproduce**

1. Create a project with two repository sources and no local folder
paths.
2. Assign a task to the project and run it in Daytona.
3. Inspect the task workspace and the repository paths exposed to the
agent.
4. Observe that the original implementation supplies only the selected
checkout.

Related change: #13010 added multiple repository selection. The open
repository-catalog proposals #11234 and #11228 cover a different data
model. This fix uses the existing project workspaces.

## What Changed

- Materialize each additional distinct repository as an editable
checkout inside the task root. Seed configured local sources with their
current working files and retain task edits across runs.
- Pass materialized repository paths to local agents and native sandbox
task prompts. Apply existing run-scoped Git credentials to each remote
clone.
- Preserve each repository's Git history, dirty files, and restore
baseline during sandbox staging and durable recovery. Apply each
repository's ignore rules and the operator's workspace exclusions.
- Keep same-name managed repositories in separate directories. Report
additional clone failures before the task starts.
- Add task-level, checkout, sandbox round-trip, environment-hint, and
recovery-descriptor regression coverage. Document checkout and restore
behavior.

## Verification

- Red: the original implementation fails the sandbox test because the
second repository has no Git directory. It also fails the same-name
checkout test and both real-database task tests because repository hints
have no local path.
- Green: focused tests pass for one and two repository-only sources,
local source edits, clone failures, per-repository credentials, separate
Git histories, ignored files, and recovery from remote or durable seed
state.
- Live Daytona smoke passed with two disposable repositories through the
production provider sync functions. Both repositories arrived with Git
history. Commits from both restored locally. Ignored files stayed
excluded. The disposable sandbox was deleted.
- Passed on final commit `93ab76763`: `pnpm -r typecheck` and `pnpm
build`.
- Final focused coverage: 254 assertions across the six changed test
areas passed across the serial run and an isolated rerun of the existing
process-kill timing test. The live Daytona smoke also passed.
- The local `pnpm test:run` overlapped source edits and retained stale
transformed code. Its first phase reported 12,240 passed assertions,
nine failed assertions, three hook failures, and one worker error; later
phases did not run locally. This run is not claimed as green. Fresh
focused tests verify the changes, and every general/workspace and
serialized-server CI shard passes on the final commit.
- Final CI is green on `93ab76763`: all test shards, all three browser
shards, typecheck, build, runner verification, canary dry run, and
security checks. The initial unrelated chat-delivery browser timing
failure passed in the final CI run. Optional Storybook visual checks
were skipped.
- Greptile is 5/5 on the final commit with no unresolved review threads.
Its checkout-race finding was reproduced with a failing test, fixed, and
rechecked.

## Risks

- Additional repositories need disk space and clone time. Access failure
for an attached repository stops preparation.
- Additional checkouts live under `.paperclip-repositories/` and keep
independent histories. Changes stay in those task copies; they do not
overwrite configured source folders.
- Detached or reconfigured repository copies are retained under
`.paperclip-runtime/detached-repositories/`. Sandbox recovery retains
per-repository merge baselines.
- No database migration, UI contract change, or new credential
delegation is required. Referenced projects retain their separate
read-only behavior.

## Model Used

OpenAI Codex, based on GPT-6, with repository inspection, code
execution, and tool use. The runtime does not expose a more specific
model deployment ID or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-14 18:37:51 -05:00
DottaandPaperclip 0e9b24c821 fix: resume subscription comment wakes and preserve retry status (#13433)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Concurrent task runs can share a managed AI subscription with one
credential lease.
> - #13438 added durable retries for busy subscriptions and task-lock
checks.
> - A comment wake can run for an agent who is not the task assignee.
Such a run never owns the task lock, so the new checks suppress its
retry.
> - This pull request preserves those comment wakes while keeping the
lock checks for assignee runs.
> - It also shows the subscription wait in task status and preserves the
failure count through the database projection.

## Linked Issues or Issue Description

Refs #13438.

**What happened?**

When a subscription is busy, a non-assignee comment wake is cancelled
without a successor. Repeated subscription waits also display an
inflated attempt count because the execution query omits the preserved
failure count.

**Expected behavior**

An eligible comment wake waits and resumes without claiming the
assignee's task lock. The task shows “Waiting for AI subscription”.
Waiting does not consume provider-failure retries. Assignee retries
still stop when the task lock is cleared or transferred.

**Steps to reproduce**

1. Configure an agent with a managed subscription and concurrent runs.
2. Hold its credential lease in one run.
3. Mention the agent on a task assigned to another actor.
4. Release the lease and inspect whether the comment wake has a
scheduled retry.

The test uses a real embedded Postgres database and a real credential
lease. Provider execution uses a fixture. The reassignment test applies
a database mutation after the real checkout. No live provider account is
needed.

**Paperclip version or commit**

Based on `f912ecaac` from #13438. Before the reconciliation fix, the
rebased regression at `2063cfd13` failed because the comment wake had no
scheduled retry. The original configuration failure was reproduced on
`5282cabde` before #13438 merged.

**Deployment mode**

Built from source with embedded Postgres for local verification.

## What Changed

- Record non-assignee comment-wake authority at admission while holding
the task and run locks. A later reassignment cannot grant this
exception. Preserve it through repeated subscription waits.
- Keep master’s lock checks for assignee retries, including the check
inside the scheduling transaction.
- Show the subscription wait and preserve its failure count in the
execution projection query.
- Limit pre-provider wait receipts to fresh executions. A persisted
native execution input must retain its recovery path.
- Add lease, retry, projection, cancellation, reassignment, pause,
revocation, service-recreation, and ownership regression coverage.
- Use master’s 60–120 second retry interval and document the resulting
behavior.

## Verification

- Red: after rebase, the comment-wake test failed with no scheduled
retry; the other 50 contention and retry-scheduling tests passed.
- Red/green: reassigning the task immediately after real checkout
reproduced an unwanted successor for both assignment and comment wakes.
Both tests pass after recording authority at admission.
- Green: all 285 targeted tests pass across 12 suites, including
#13438’s four cancellation-race phases, its hiring/connection suite,
run-dispatch integration tests, and both reassignment regressions.
- `pnpm -r typecheck` passes after rebase.
- `pnpm build` passes on the final revision.
- The full general and serialized test suites pass in [CI run
34899514681](https://github.com/paperclipai/paperclip/actions/runs/34899514681)
on `99f1e4c1d`. Full-suite verification ran in CI; local verification
used the 285 targeted tests.
- All 32 active PR checks pass, including build, typecheck, native
runner verification, canary dry run, and all browser shards. Two
Storybook checks are skipped by path filters.
- Greptile reviewed `99f1e4c1d` at 5/5 with no outstanding findings. All
review threads are resolved.
- `git diff --check` and `node scripts/check-module-boundaries.mjs`
pass.

## Risks

- The non-assignee exception requires authority recorded under admission
locks or its server-created subscription retry. Tests cover
caller-supplied flags, assignment and comment reassignment races,
repeated comment waits, and assignee lock protections.
- A wait uses master’s 60–120 second interval. A long-held lease can
produce multiple wait records.
- Existing native sessions can have provider effects. They must not
receive a fresh-execution receipt that permits replay.
- No schema migration or credential permission change is required.

## Model Used

OpenAI Codex, model `gpt-6-astra`, with repository search, code editing,
shell execution, and test tools. The session does not expose its
context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-14 16:58:37 -05:00
DottaandPaperclip f912ecaacf fix: carry AI connections through hiring and unblock task execution (#13438)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Agents hire other agents and assign tasks to them.
> - Managed AI connections must follow those hires across legacy and
native runners.
> - Missing accounts should pause task execution and let the user
connect from the task.
> - Subscription contention must wait without asking for new
credentials.
> - This pull request fixes these paths and the native tool and Daytona
staging failures found during live tests.
> - The result is a working hire, subtask, and connection setup flow on
local and remote runners.

## Linked Issues or Issue Description

**What happened?**

A managed Claude or Codex agent could hire a teammate without a usable
AI binding. Cross-provider hiring could fail before the user had a
chance to connect the new provider. First-time task setup did not show
the existing AI credential form inline. A busy subscription could
request a new connection. Native API replies could stop the parent after
a hire had already committed. Fresh Daytona sandboxes could fail to
extract read-only skill directories created on macOS.

**Expected behavior**

Compatible hires inherit the managed connection choice. A hire for
another provider uses the responsible user's default. If that account is
missing, the hire succeeds and the task asks for a connection.
Completing setup in the task resumes work automatically. Explicit child
auth settings and existing unmanaged login paths keep precedence.
Shared-account access checks remain in force.

**Steps to reproduce**

1. Connect a Claude or Codex parent with a managed AI account.
2. Ask it to hire one agent of each provider and create a self-assigned
subtask.
3. Assign work to both hires without connecting the second provider
first.
4. Connect the missing provider from its task card.
5. Check that all tasks finish and same-provider work uses the original
account.
6. Repeat with native runners and fresh Daytona sandboxes. The opt-in
browser suite in `tests/hiring-ai-connections/README.md` performs these
steps.

**Paperclip version or commit**

The live failures were reproduced from `f2c5e54dc`. The branch is
rebased onto `5282cabde`.

**Deployment mode**

Isolated local development instance. Legacy CLI and native runners.
Local execution and ephemeral Daytona sandboxes.

Related work: Refs #13247 for managed AI connections. Refs #13268 for
legacy credential-reference inheritance, which this branch preserves.
Refs #13432 for a concurrent managed-inheritance fix. This PR also
covers cross-provider task setup, subscription waits, native API
replies, and Daytona extraction. It permits missing responsible-user
defaults at hire time; restricted shared selections still fail.

## What Changed

- Apply managed connection defaults to both agent creation routes.
Preserve explicit auth choices and legacy credential-reference
inheritance.
- Allow hires before their responsible user connects the provider. Keep
approval gates, company boundaries, and shared-account access checks.
- Reuse the production AI credential form inside the pending task card.
Resume the task after setup.
- Retry subscription lease contention without consuming the
provider-failure allowance or creating a connection request.
- Require task execution-lock ownership when scheduling, promoting, and
dispatching subscription retries. Recheck ownership under the issue row
lock.
- Rename the HTTP operation identity at the native tool boundary so it
cannot override the runner's operation identity.
- Delay directory permission restoration during Daytona extraction.
Preserve the final read-only modes.
- Add database-backed regressions, real browser acceptance tests, and
Storybook states. Document setup and run-log behavior.

## Verification

- Six real browser scenarios passed: both parent providers on legacy
local and legacy Daytona; native Codex locally; native Claude on
Daytona. Each scenario hires both providers, completes a self-subtask
and assigned work, and connects the missing provider inline with
automatic continuation.
- Successful runs verify the account, responsible user, runner mode, and
Daytona lease. All 18 test sandboxes were deleted.
- Live authentication used API keys. Subscription inheritance, lease
contention, and retry have integration coverage. Fresh subscription
OAuth sign-in was not automated.
- Red/green tests reproduced missing bindings, missing inline forms,
subscription contention, native API reply failure, and GNU tar
permission failure.
- Seven Storybook browser checks passed. They cover both providers,
method selection, narrow layout, completion, cancellation, and invalid
credentials.
- Full local suite coverage completed before rebase. Initial timing and
fixture startup failures passed unchanged on isolated reruns. The first
full command did not exit cleanly; the remaining workspace and
serialized groups were completed separately.
- After rebase, 107 hiring/auth/retry tests and 59 native API,
task-card, and Daytona tests passed. The full workspace typecheck,
production build, and token gates passed again. Storybook build passed
before rebase.

- Review fixes: 169 hiring/retry/dispatch tests, 37 adjacent tests, and
four explicit cancellation-race cases passed. Eight cross-provider cases
cover stale auth keys on both creation routes and both runner types.
Server typecheck and build passed.

- Final CI on `ee4890837a8a4913e07453392b9a75969580dae1`: 32 checks
passed. Two optional Storybook jobs were skipped. The full server,
workspace, browser, native runner, build, typecheck, and release checks
passed.
- Three unchanged tests initially failed on a busy port, a chat row-lock
race, and preview-server readiness. Each affected job passed after one
CI rerun. Isolated local checks also passed: 41 credential tests, the
chat-concurrency case, and 25 preview-runtime tests.
- Greptile reviewed the final commit at 5/5. Both review threads are
resolved. GitHub reports no merge conflicts.

## Risks

- A missing personal account now defers authentication to the first
task. Explicit incompatible bindings and restricted shared accounts
still fail at hire time.
- An inherited personal default uses the responsible user's existing
authorization to install access for the new agent. It never copies
credentials or another user's identity.
- Subscription contention retries after a delay and rechecks task
eligibility. It does not consume the provider-failure budget.
- Native hiring uses the existing managed API-tools opt-in. Remote
native runners require a matching Linux binary and provider pack, as
documented in the acceptance README.
- No schema changes. Live tests make paid provider calls and remain
opt-in.

## Model Used

OpenAI GPT-6 (`gpt-6-astra`) in Codex, with reasoning, repository
inspection, code execution, browser automation, and API tools. The
context-window size is not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-14 16:15:48 -05:00
02c7175e72 feat(agents): hired agents inherit provider credential references (#13268)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Agent adapters need provider credentials to start work
> - A hired agent can lack the credential reference that its hiring
agent already uses
> - The child agent then cannot authenticate, even when the company has
a valid credential
> - This pull request copies matching credential references from the
hiring agent to the hired agent
> - The benefit is that hired agents can start with the provider access
that the hiring agent already uses

## Linked Issues or Issue Description

This change relates to [PR
#9920](https://github.com/paperclipai/paperclip/pull/9920), which covers
credential inheritance for other agent creation paths. This pull request
covers hiring-specific inheritance and fixed Claude OAuth binding
checks.

### What existing behavior does this improve?

The agent hire route builds the child adapter configuration from the
hire request only.

### Current behavior

A hired agent does not receive matching provider credential references
from its hiring agent. The child agent cannot run when the request omits
the credential.

### Proposed behavior

The hire route inherits matching credential references from the hiring
agent. The request keeps priority. A Claude hire that supplies any
Claude credential inherits none.

### Reason and benefit

The child agent can use the provider access that the hiring agent
already uses. The change copies references only and never copies raw
token values.

### Breaking changes

None. The change affects only hires that need an inherited reference.

## What Changed

- Copy matching credential references from the hiring agent into the
hired agent adapter configuration.
- Preserve pinned versions, `required`, and `allowMissingOverride`
fields on each copied reference.
- Keep hire-request credentials ahead of inherited credentials.
- Reject inherited fixed Claude OAuth bindings unless the parent agent
passes company, adapter, and exact-binding checks inside the same
transaction.
- Add route and service tests for inheritance, precedence, and binding
validation.

## Verification

- `pnpm exec vitest run --project @paperclipai/server
src/__tests__/agent-hire-auth-inheritance-routes.test.ts
src/__tests__/agents-claude-oauth-binding.test.ts` — 60 passed.
- `pnpm exec vitest run --project @paperclipai/server
src/__tests__/agent-hire-idempotency-routes.test.ts
src/__tests__/agents-service-secret-bindings.test.ts
src/__tests__/secrets-service-user-secret-owner-scoped.test.ts` — 28
passed.
- `tsc --noEmit` in `server/` — the error count matches the merge base,
with no error in either changed source file.
- `git diff --check` — clean.

## Risks

Low risk. The route copies references, not raw tokens. The request keeps
precedence. Company, adapter, and exact-binding checks protect the
inherited Claude OAuth path.

## Model Used

Codex, OpenAI GPT-5, with code execution and review support. The
implementation commit predates this pull request handoff.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: nickyleach <331803+nickyleach@users.noreply.github.com>
Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-14 09:26:27 -07:00
DottaandPaperclip 78ce96a48b fix(runner): restore native Claude context and read permissions (#13422)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The native runner supplies each agent with instructions, assigned
skills, and tools.
> - Native Claude lost its skill snapshot before provider launch. It
also changed exact model IDs to aliases.
> - The read permission mode denied ordinary Paperclip reads because
this runner has no interactive approval handler.
> - This pull request restores the missing context and permits only
assigned tools that Paperclip defines as reads.
> - Other requests that need approval stop with a clear action for the
operator. They do not retry automatically.
> - Agents can complete read tasks. Users can see why a restricted task
stopped.

## Linked Issues or Issue Description

**What happened?**

Native Claude could not find assigned skills. The ACP layer could
replace an exact model ID with an alias and then fail identity
verification. The default `approve-reads` mode denied Paperclip read
tools. A denied write showed a generic transport failure.

The tool descriptions also called live operations “mock” operations. The
completion prompt said to call a completion tool once, although the
protocol can reject a claim and require a corrected call.

**Expected behavior**

Load assigned skills before launch. Keep the selected model ID. Allow
assigned Paperclip reads. Stop an operation that needs approval with
clear instructions when no approval handler exists.

**Steps to reproduce**

1. Configure a native Paperclip Runner agent with ACPX Claude and an
exact model ID.
2. Assign a skill and ask the agent to use it.
3. Select the read permission mode and ask the agent to read task
context and list documents.
4. Ask the agent to write a document. Check the task state and recovery
message.

**Paperclip version or commit**

Reproduced from `d351e08deee1b49d3467a950d1a3f01131943441`.

**Deployment mode**

Local native runner with real Claude, Rust runnerd, the Paperclip
server, and embedded PostgreSQL.

Related: #13196 fixed remote skill staging in the legacy `claude_local`
adapter. The native runner uses a separate path, which this pull request
fixes.

## What Changed

- Carry the runtime context through Rust and the ACPX sidecar. Load
assigned Claude skills after the provider lifetime lease is held.
Refresh the files on each open.
- Write the exact requested model ID into the isolated Claude settings.
- Grant exact MCP permissions for the intersection of assigned tools and
Paperclip's read catalog. Provider hints cannot grant access. Existing
task-control permissions stay in place.
- Stop requests that need an unavailable approval handler. Preserve the
typed error through the server. Show “Approval required” on the task and
require operator action without automatic retry.
- Label the setting “Allow Paperclip reads.” Remove “mock” from live
tool descriptions and regenerate the contracts.
- Change one completion-prompt sentence to require one accepted result.
Add regression tests and update the runner documentation.

## Verification

- Red/green regression tests cover read admission, unavailable approval
handling, server recovery, and the task error message.
- A real Claude read trial failed before the fix and completed after it:
[red
trace](https://www.braintrust.dev/app/Paperclip/object?object_type=project_logs&object_id=fda74078-b00d-495a-90d3-ea1be019d71b&id=95e6a326e24437f1),
[green
trace](https://www.braintrust.dev/app/Paperclip/object?object_type=project_logs&object_id=fda74078-b00d-495a-90d3-ea1be019d71b&id=85a1f347db5604d1).
- Full browser tests used real Claude and the production tool authority.
Reads completed. A write stopped with “Approval required.” No document
was created and no automatic retry was scheduled. All nine checks
passed: [events and
screenshots](https://www.braintrust.dev/app/Paperclip/object?object_type=project_logs&object_id=fda74078-b00d-495a-90d3-ea1be019d71b&id=1c4ff10be0d779cc).
- A separate full browser test assigned a skill, invoked it, and
completed with a marker absent from the task prompt: [skill
evidence](https://www.braintrust.dev/app/Paperclip/object?object_type=project_logs&object_id=fda74078-b00d-495a-90d3-ea1be019d71b&id=ba5fbcb29a60be52).
- Post-rebase checks passed: 128 targeted runner tests, 46 Rust tests,
27 sidecar/protocol contract tests, `pnpm -r typecheck`, and `pnpm
build`. The server/UI red-green checks and `pnpm check:token-gates` also
passed. The full suite passed in CI, including all general and
serialized test shards, all three browser shards, and runner
`check:all`. The duplicate unsharded local full-suite run was stopped
after CI passed.

Braintrust links require project access. The traces contain
provider/runner events and app outcomes. They do not contain raw model
HTTP requests.

## Risks

- `approve-reads` now allows assigned Paperclip reads. Other operations
that need approval stop the turn. Users must review the operation and
change permissions before retrying.
- The Claude settings depend on the pinned ACP and SDK behavior.
Automated tests and real Claude trials cover this boundary.
- The native Codex path is unchanged. The ACPX Codex fallback shares the
clearer approval failure handling.
- Local execution was tested end to end. Remote execution was not run.
This change has no database migration.

## Model Used

OpenAI GPT-6 through Codex. The agent used reasoning, code execution,
and browser tools. The exact deployment ID and context-window size were
not exposed in the session. Live acceptance tests used
`claude-sonnet-5`.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-14 10:56:24 -05:00
DottaandPaperclip 728f7185f6 feat: add native in-app announcements with persistent dismissal (#13403)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Self-hosted boards need a way to show occasional product
announcements.
> - An app release should not be required to publish or withdraw a card.
> - Native card controls keep publishing consistent; the hero can use a
static image or isolated HTML/CSS animation.
> - This pull request renders a validated JSON feed with native
components.
> - It stores dismissals per account on each instance, so a closed card
stays closed across companies and browsers.
> - Named staging feeds let authors test content before production
publication.

## Linked Issues or Issue Description

**Subsystem affected**

Board application shell, announcement delivery, and user preferences.

**Problem or motivation**

Operators need a small, optional announcement card. Users need reliable
dismissal state. Authors need to test remote content without changing
the production feed.

**Proposed solution**

Add one non-modal AnnouncementWell. Fetch validated JSON and
content-addressed media through the instance server. Keep card controls
native, with optional sandboxed HTML/CSS animation in the hero. Use
stable announcement IDs for dismissal, an explicit empty manifest and
quiet 404 handling. Provide a staged publishing helper and isolated
test-drive guide.

**Alternatives considered**

Hosting the entire card as a page would move navigation and dismissal
into remote content. This change limits HTML to a scriptless, isolated
visual hero and keeps controls native. Browser-only storage would lose
dismissals across browsers, so the instance stores account preferences.

**Roadmap alignment**

ROADMAP.md has no overlapping announcement feature. A GitHub title
search found no related announcement pull requests. This work implements
a maintainer-requested feature.

## What Changed

- Add shared feed types, strict validation of every object, supported
routes, expiration and version checks.
- Add a board-only current-feed API, constrained media proxy, and
idempotent dismissal API. Store the first dismissal and its company
audit entry in one transaction.
- Cache upstream data for one hour. Use conditional requests, request
deduplication, response limits, public destination checks, and a
three-second deadline. Treat a remote 404 as an empty feed with a
fifteen-minute retry cooldown.
- Keep announcement visibility stable when focus moves to browser chrome
or another app pane; only tab visibility starts a return check.
- Add a responsive native announcement card. Respect onboarding, dialogs
and toast placement. Sync pending dismissals across tabs and retry after
reconnect or return.
- Add idempotent migrations for dismissals and validated publication
IDs, design-guide examples, static and animated Storybook examples, and
focused tests. The publication registry supports offline retries without
accepting caller-invented IDs.
- Add HTML/CSS animated heroes with static posters, automatic playback,
reduced-motion handling, strict DOMPurify validation, an empty iframe
sandbox and CSP that blocks scripts/network resources.
- Add validated staging publication, content-addressed assets, an empty
production manifest, preview fixtures, and authoring/operator
documentation.

## Verification

- The preceding implementation passed 98 targeted
shared/server/publisher/route/OpenAPI/UI tests and 127 tests including
the master rebase. The playback-control removal passes all 21
announcement UI tests, covering the rendered sandbox, fallback, reduced
motion, dismissal and slow/stale state lookups. The preceding
shared/server tests cover HTML validation and response sandbox headers.
- The playback-control removal passes UI typecheck, production UI build,
Storybook build and token gates locally. Browser verification confirms
the animated card has only its dismiss button and two links, with no
page errors. The full canonical CI matrix passed on current head
`00e416431edb610861599d50490270bbd0f3c6b6`: 32 successful checks and two
optional Storybook deployment checks skipped. This run needed no
retries. Greptile reviewed this same head at 5/5 with no outstanding
findings.
- The local canonical general-server run passed 12,063 tests before
reporting embedded-PostgreSQL startup failures in an unrelated fixture.
All 31 tests in that fixture passed across isolated retries. The UI
group passed 6,219 tests and other workspace groups passed 3,201; two
CLI database-startup failures also passed individually. Serialized
server suites were verified by the full CI matrix rather than repeating
them locally. No source changes were needed for these environment
failures.
- The real S3/CloudFront staging manifest and both media asset headers
were verified. Production remains empty/unpublished. The guide
distinguishes the preview host's disabled edge cache from production
cache requirements.
- In the isolated test-drive, the animation visibly moves without
playback controls. A 390×844 browser viewport keeps the card above
navigation. Reduced motion makes no animation request. Both themes
render correctly and browser page errors are empty. Browser fault
injection verified that scripts cannot execute and CSS cannot make
network requests; a missing animation leaves its poster and controls.
- Refresh leaves the animated card visible. Closing it persists after
reload and the API returns null. Earlier live checks verified dismissal
across browsers, company-relative CTA navigation, modal
deferral/restoration, and new-ID eligibility after restarting the same
database.
- The deployed empty feed and a real remote 404 return HTTP 200 with
null from the board API, with a usable dashboard and no announcement
popup or browser warnings.
- Authoring documentation covers staging, animated HTML constraints,
test-drive, withdrawal, ID reuse and cache-refresh steps.

## Risks

- Animation supports self-contained visual HTML/CSS and inline SVG,
without JavaScript or external resources. A static image is required.
Older builds that do not recognize the optional animation field quietly
hide that unsupported feed.
- The default feed makes an outbound request from an instance when a
board is used. Operators can disable it. Requests contain no account
IDs, company data, cookies or interaction events.
- Feed publication and withdrawal can take about 65 minutes to reach
returning users because of CDN and instance caches. Expiration also
removes visible cards locally.
- Dismissals follow an account within one instance. No-login instances
share the existing local-board identity. Separate installations do not
share state.
- Both tables are additive. A unique key prevents duplicate dismissals;
the transaction prevents duplicate first-dismissal audit entries. The
publication registry retains only validated IDs. AGENTS.md and the
implementation spec document the required exception to company scope for
these instance-level records.
- Publication was limited to separate public staging prefixes on the
existing preview host. Production remains empty/unpublished. No AWS
policies or infrastructure were changed.

## Model Used

OpenAI GPT-6 through Codex. The exact runtime model ID and
context-window size are not exposed in this session. Capabilities used:
reasoning, code editing, shell execution, tests, browser interaction,
and tool use.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-14 10:19:54 -05:00
DottaandPaperclip f1d57863d2 fix: make connection checks and task handoffs reliable (#13404)
Preserve connection-probe outcomes through cleanup, reduce unrelated startup work, and report selected Claude authentication accurately. Make artifact download actions match their labels.

Route delegated feedback through its active child, retain accepted messages across completion, and avoid redundant worker runs for proven closing notes. Preserve explicit follow-ups, human input, company boundaries, source provenance, and mixed issue references.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-14 10:06:06 -05:00
DottaandPaperclip 4cd7b40255 fix: recover new messages after historical native runs stop (#13405)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Native recovery must distinguish a fresh user request from replay of
failed work.
> - Older runs can lose their process fields before a local stop receipt
exists.
> - A suspended durable session can still prove that the exact runner
and provider session are idle.
> - The message admission path ignored that evidence and kept new user
messages blocked.
> - This pull request uses the existing exact-state verifier for those
historical runs.
> - The user can start one fresh turn while the old history and unknown
outcomes remain intact.

## Linked Issues or Issue Description

**What happened?**
A user sent a new message after a native run exhausted recovery.
Paperclip saved the message but said the previous run had no verified
stop record. The old runner was suspended, with no active provider turn
or pending output. Its process fields had been cleared before stop
receipts were added.

**Expected behavior**
A new user message starts a fresh turn when the exact retained session
proves it is suspended and the other execution gates pass.

**Steps to reproduce**
1. Retain a failed native run with a terminal controller, cleared
process fields, and no process receipt events.
2. Retain its exact suspended runner state and idle provider state. Keep
its recovery hold.
3. Send a new user comment. Before this fix, admission returns no
successor.

**Paperclip version or commit**
Reproduced on master at d351e08de.

**Deployment mode**
Self-hosted server. The regression uses an embedded PostgreSQL test
database and real durable state files.

Related work: Refs #13270, Refs #13338. This adds compatibility for
older stopped runs. Refs #13332 concerns separate recovery-hold scope
rules.

## What Changed

- Add exact suspended-state evidence to explicit native message
admission for runs that predate process receipts.
- Reuse the existing failed-retry verifier for run, runner, workspace,
provider identity, and pending-work checks.
- Reject this fallback if any server-authored process receipt or launch
event exists.
- Add a red/green regression with real message admission, duplicate
delivery, dry-run behavior, and blocked-state cases.
- Document the new-message recovery rule.

## Verification

- Red: the historical suspended-state regression failed on master
because admission returned null. Eight rejection cases passed.
- Green: 469 tests passed across explicit native continuation and native
session execution.
- Full repository `pnpm -r typecheck` and `pnpm build` passed locally.
- The complete Vitest CI matrix and all browser test shards passed. The
duplicate local `pnpm test:run` was stopped after these CI results; it
did not complete locally.
- The first runner verification worker received an infrastructure
shutdown signal during compilation. The single retry passed.
- Greptile reviewed commit `6836d7310` at 5/5 with no findings.
- Inspected the affected server's database and durable state read-only.
It has the historical missing-PID shape and an exact suspended runner
with no active provider turn, pending tools, or undelivered output.

## Risks

- Incorrect idle evidence could allow overlapping work. The fallback
requires an exact suspended root and rejects active or pending work,
mismatched identities, missing files, and newer process evidence.
- Normal task, controller, lease cleanup, decision, and active-run gates
remain in force.
- This does not resume old provider actions or reset recovery attempts.
Unknown outcomes remain unknown.
- No schema change or deployment is included.

## Model Used

OpenAI Codex, GPT-6. The session does not expose the exact model
snapshot or context-window size. Used reasoning, repository inspection,
code editing, shell execution, and test tools.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-14 09:45:34 -05:00
Devin Foley 13368c5183 fix: unblock clean-machine onboarding for api_key AI connections (nightly smoke) (#13372)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The release pipeline gates each nightly on a Docker onboarding
smoke. The smoke proves a clean machine can finish onboarding and hire
the first agent.
> - #13247, #13248, #13344, and #13351 changed the Connect step. Connect
now creates an AI connection that the server verifies live with the
provider.
> - The managed adoption check also demanded a CLI hello probe. A clean
machine has no provider CLI and cannot complete a subscription login.
Onboarding dead-ends and the nightly gate fails.
> - This pull request lets a live-verified API key adopt on the engine's
own verdict, and re-verifies the key with the provider at adoption time.
> - It also drives the release smoke through the API-key path against a
provider mock that lives inside the test harness.
> - The benefit is a green, deterministic release gate with no paid
credential in CI, and a working first run for API-key users on clean
installs.

## Linked Issues or Issue Description

No public issue exists. The failure surfaced in the nightly release
gate. Related PRs (no duplicates found): #13247, #13248, #13344, #13351
(the Connect changes), and #12423, #12135, #12151 (earlier release-smoke
updates).

**What happened?**

The nightly Release cut failed its gate: [run
34749840498](https://github.com/paperclipai/paperclip/actions/runs/34749840498),
job `smoke_nightly / smoke`, on published canary `2026.913.0-canary.2`.
The wizard never left the "Connect a model" step. The subscription path
waits for a human to run `claude auth login` on the server. The API-key
path saves and live-validates the key, but the environment test then
fails with `Command not found in PATH: "claude"` and
`ai_connection_validation_incomplete`, and the wizard blocks the hire.

**Expected behavior**

A clean machine with a provider-accepted API key completes onboarding
and hires the lead agent. The release smoke passes without a real paid
credential in CI.

**Steps to reproduce**

1. Run `scripts/docker-onboard-smoke.sh` with
`PAPERCLIPAI_VERSION=2026.913.0-canary.2`.
2. Sign in, complete onboarding to "Connect a model", select "Use API
key instead", pick Claude, enter a valid API key, and press Connect.
3. The environment test fails on the missing `claude` CLI and blocks the
hire.

**Paperclip version or commit**

`2026.913.0-canary.2` (nightly candidate `c9e3bb7ca`).

## What Changed

- `server/src/routes/agents.ts`: `testManagedEnvironment` no longer
forces the CLI-lane hello probe for a resolved `api_key` binding. It
re-verifies the key against the provider's live endpoint instead (the
same `validateAiApiKey` check the save performed, which needs no CLI). A
key the provider rejects fails adoption with
`ai_connection_api_key_rejected`. Subscription adoption keeps the strict
hello-probe requirement.
- `scripts/docker-onboard-smoke.sh`: the harness now serves
`api.anthropic.com` itself. A sibling container (the already-built smoke
image) runs a small HTTPS mock. The app container gets `--add-host` for
that one hostname and trusts the mock's certificate through
`NODE_EXTRA_CA_CERTS`. The private key stays mode 600 in the mock
container; the app container mounts only the certificate. The mock
serves only `GET /v1/models` and returns 404 for every other path.
`SMOKE_PROVIDER_MOCK=false` disables it.
- `tests/release-smoke/docker-auth-onboarding.spec.ts`: the spec drives
the API-key path — switch the credential mode before the source tile
(the link hides when the row collapses), enter the key, and Connect.
Loopback targets use a placeholder key that the mock accepts. Any other
target must set `PAPERCLIP_RELEASE_SMOKE_ANTHROPIC_API_KEY`, and the
test fails on arrival without it.
- `server/src/__tests__/agent-test-environment-routes.test.ts`: three
new route tests cover accepted keys (no CLI probe consulted),
provider-rejected keys, and subscriptions that cannot complete a hello
probe.

## Verification

- `npx vitest run src/__tests__/agent-test-environment-routes.test.ts` —
26/26 pass.
- `npx vitest run src/__tests__/ai-connections.test.ts
src/__tests__/ai-legacy-compatibility.test.ts` — 42/42 pass.
- `tsc --noEmit` reports no errors in the touched files.
- Full local harness + suite run against the exact failing canary: the
app container reaches the mock (request visible in the mock log), the
placeholder key validates, and the connection saves as the default. The
flow then stops at the forced CLI hello probe — the exact server check
this PR removes, still present in the published canary. The next canary
that includes this fix is the end-to-end proof.
- Hardening check: from inside the app container, the mock answers with
status 200 and `key.pem` is not visible.

## Risks

- Behavior shift: `api_key` adoption no longer requires a CLI hello
probe. It re-verifies the key with the provider at adoption instead.
Subscription adoption is unchanged.
- The mock returns 404 for unexpected provider calls, so a future
onboarding change that calls a new endpoint fails the smoke loudly
instead of passing silently.
- Release-smoke runs against non-loopback targets now require an
explicit key and fail fast without one.
- No database migration. No dependency change. No provider routing
change.

## Model Used

Claude Fable 5 (`claude-fable-5`) through the Claude Code CLI, with
extended thinking and tool use (shell, file edits, Playwright runs,
GitHub CLI). No other models were used.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge
2026-09-13 17:02:02 -07:00
DottaandPaperclip f2c5e54dca fix(runner): preserve handoff work and publish requested files (#13355)
## Thinking Path

> - Paperclip lets people manage AI agents and their tasks.
> - A task keeps its instructions, progress, and files when its assigned
agent changes.
> - The replacement runner lost the interrupted run's context and could
overwrite an existing draft.
> - A saved message also stayed attached to the former agent and could
reopen the task after the replacement finished.
> - File tasks could report Done with only a local path that the user
could not open.
> - This pull request transfers handoff context and saved messages, and
makes requested files accessible through the existing attachment
contract.
> - Users can change agents and collect completed work without repeating
instructions or confirming bookkeeping.

## Linked Issues or Issue Description

Refs #13338. Builds on merged #13354 for queue admission and #13353 for
remote workspace retry. #10123 concerns restricted recovery-model
escalation; this change instead covers ordinary native handoff and file
completion.

**What happened?**

Codex wrote a draft before a user assigned the task to Claude. The
replacement lacked continuation context and replaced the draft. A queued
user message could later restart the former agent and reopen the
completed task. Separately, a runner could finish a requested file but
return only a machine-local path. Remote native runs had no bound file
publication tool.

**Expected behavior**

The replacement reads and preserves existing work, receives saved
messages once, and keeps each message's author. The former agent stays
stopped. A requested file has a working attachment or accessible work
product before Done. Text-only tasks do not require attachments.

**Steps to reproduce**

1. Ask Codex to save three newsletter names and then wait.
2. Queue an instruction to keep those names and expand the draft.
3. Use Interrupt and assign to select Claude.
4. Verify the original names survive, the result has a working download,
and only the source and replacement runs exist.
5. Ask either provider for a Markdown checklist and open the file from
its completed response.

## What Changed

- Carry the exact same-task interrupted run's summary, semantic
receipts, and history into handoff context. Tell the replacement to
inspect existing files before editing.
- Adopt saved ordinary task comments into the successor's receipt under
the task lock. Preserve authors and separate mention, chat, and
interaction contracts.
- Prevent a former-assignee comment wake from reopening a completed task
or starting a stale execution.
- Reject workspace-only, fabricated, and cross-task file completion
references with actionable runner feedback. New file output also needs a
matching current-run publication receipt and asset filename/size/hash,
or an accessible work product registered by the current run. Prior
output can remain context alongside a current file, or be verified and
re-registered internally. Authorized chat attachment reuse retains its
verified current-run clone receipt; older receipt shapes require an
intact matching source.
- Bind remote file reads to the active environment runner and reuse the
existing attachment and work-product publication path.
- Enforce workspace confinement, regular single-link files, stable
identity, a 10 MiB limit, and exact size and SHA-256 checks. Rotate the
native session fingerprint for the updated tool contract.
- Contain rejected remote signals and protocol-failure cleanup,
including logging failures. Preserve the original cleanup rejection for
its owner; a rejected operation never supplies stop acknowledgement or
cleanup proof.
- Allow exactly one maximum-size base64 file through the native SSH
command adapter, preserving a finite output cap.
- Document handoff and accessible file completion rules.

## Verification

- Each observed bug has a failing regression before its fix. Final
post-rebase integration passed 732 tests across 13 files before the
final receipt and signal guards; final affected results are below.
- Publication provenance and compatibility: 8 provenance regressions and
2 compatibility regressions failed before their fixes; the final four
affected suites pass 53 tests, including mixed old/new references and
real authorized chat reuse. Controls cover old attachments and work
products, filename/size/hash/origin mismatch, missing/wrong receipts,
current-run publication, same-run durable proof, internally
re-registering preserved bytes, and no-new-file follow-ups.
- Remote signal rejection: the real Node subprocess previously exited 1
when the production launcher signalled a deleted sandbox. It now stays
alive for both a failed signal and failed logging; all 349 executor
tests pass. The failed signal still provides no termination proof.
- Remote file reader and SSH command boundary: 33 tests passed,
including real Linux descriptor reads and the actual SSH adapter
subprocess output cap (network executable replaced by a deterministic
fixture). Exact 10 MiB bytes pass, one byte beyond the encoded cap
fails.
- Live local Claude and Codex Stop journeys preserve the saved file,
deliver queued instructions once, and reach Done with two total runs.
The handoff journey preserves the original names and download with
exactly two runs. Both local providers deliver exact checklist files
without a completion confirmation.
- Live combined Daytona verification passed: the original failed task's
Retry reused its sandbox; a selected Git subfolder produced an exact
downloadable file; warm and deliberately resumed Claude runs took about
33 seconds. Codex produced a 240-byte download in 33.1 seconds after 134
seconds of contention/backoff. Both cloud downloads retained exact bytes
after the two owned sandboxes were deleted.
- The sandbox-deletion retest identified a separate ignored promise in
protocol-failure cleanup. Two real Node subprocess regressions failed
under fatal unhandled-rejection policy before the fix; all 36 protocol,
lifecycle, and integrity tests now pass. The original close promise
still rejects to its owning runtime. The final live retest passed: a
normal Claude Daytona task completed in 132.352 seconds, then its
sandbox was deleted. Thirteen samples over 361 seconds confirmed the
same controller stayed healthy, the task stayed Done with unchanged run
IDs, and its attachment retained exact bytes. The post-deletion browser
download passed with zero page errors; all five owned sandboxes are
confirmed absent.
- Full repository typecheck and build passed on final commit
`de64d16f1`. Final-head Greptile is 5/5 with no unresolved threads.
[Final-head
CI](https://github.com/paperclipai/paperclip/actions/runs/34736623758)
passed: 32 successful checks and two conditional skips. The earlier
mixed-source full local test invocation was deliberately stopped before
rebase, so no pristine green full local aggregate is claimed. Its known
failures passed in later affected suites.

## Risks

- Handoff may adopt only ordinary comments from its validated former
owner. Other delivery contracts must remain independent.
- File verification fails closed if a remote file changes during
reading. The runner must retry publication or explain a blocker.
- The updated session fingerprint starts a fresh provider process where
needed to install the new tool contract.
- No schema migration or historical status reconciliation is included.

## Model Used

OpenAI `gpt-6-astra` through Codex, with reasoning, code execution,
browser testing, and tool use. The context-window size is not exposed in
this task.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-13 08:41:20 -05:00
DottaandPaperclip 827ba8a434 fix: cancel stalled sandbox startup without waiting for setup (#13352)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Sandbox runs prepare credentials and files before an agent starts.
> - Stop must work during that preparation.
> - ACPX registered cancellation, but did not handle it while a setup
command was waiting.
> - Daytona cleanup waited for that same command before stopping the
sandbox.
> - This change stops the run's sandbox first and requires proof before
abandoning setup.

## Linked Issues or Issue Description

**What happened?**

Stop left a sandbox run active when remote credential setup stalled. The
run kept its connection lease until the sandbox was stopped separately.

**Expected behavior**

Stop terminates the selected run's sandbox, prevents later setup from
launching the agent, and lets run cleanup finish. It must not report
success without proof from the provider.

**Steps to reproduce**

1. Start an ACPX agent in Daytona.
2. Hold a command during remote credential or file setup.
3. Select Stop before the agent starts.
4. Before this fix, cleanup waits for the held command and never reaches
sandbox stop.

Related: #13351 exposed this during connection acceptance testing.
#12150 addresses scheduler load and session initialization limits, a
separate startup problem.

## What Changed

- Handle cancellation during ACPX sandbox preparation with a host-owned
stop callback.
- Pass an explicit active-work cancellation flag through environment
cleanup.
- Stop Daytona before draining setup commands. Keep normal graceful
cleanup.
- Require an exact run and lease termination receipt. Keep ownership of
outstanding requests when stop cannot be verified.
- Reject late setup work and defer sandbox resume until old requests
settle.
- Add regression tests and document the cancellation boundary.

## Verification

- Red: both the stalled ACPX setup test and the Daytona cancellation
test failed before the fix because Stop never reached the provider.
- Green: adapter and Daytona suites passed, along with cancellation
boundary and database-backed receipt/isolation tests.
- Two real Daytona probes ran a five-minute setup command. Cancellation
returned matching stopped receipts in 6.01 and 6.533 seconds. No later
setup command ran. Both test sandboxes were deleted.
- Repository typecheck and build passed locally. The full required CI
suite passed, including all server/workspace tests, browser shards,
Paperclip Runner verification, and canary packaging. The duplicate local
full-suite run was interrupted after CI passed; it is not claimed as a
completed local pass.
- No UI changes. The live probe uses the actual adapter cancellation
boundary and Daytona plugin; it is not a browser acceptance test.

## Risks

- Provider stop failures remain unacknowledged. The adapter keeps
ownership while its original requests remain active.
- A retry can receive a settling-work error until old provider requests
finish.
- Cancelled sandboxes are stopped and retained under their existing
provider expiry policy.
- Local execution and cancellation after the agent turn starts keep
their current behavior.
- Other providers must return an exact termination receipt to permit
early setup cancellation. No database migration.

## Model Used

OpenAI GPT-6 through Codex, with code execution and tool use. The exact
deployment identifier and context window are not exposed in this
session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-13 08:35:43 -05:00
DottaandPaperclip c9e3bb7ca4 fix: preserve queued work after native Stop and honor steering support (#13354)
## Thinking Path

> - Paperclip lets people manage AI agents and their tasks.
> - The runner owns execution, while the task keeps user instructions
and status.
> - Stop must stop the current response without losing instructions that
the user already sent.
> - The queue stored its original reason inside saved context. Recovery
checked the outer deferred reason and left the message waiting.
> - Claude also exposed Steer through a shared method even though its
driver did not support it. A rejected request could remove its own error
row.
> - This pull request keeps queued work until execution has stopped,
uses the driver's real capability, and preserves completion event order.
> - Users can continue work without repairing task state or repeating
messages.

## Linked Issues or Issue Description

Refs #13338. Related recovery work: #13353.

**What happened?**

A message sent during a native run stayed queued after Stop. Claude
exposed an unsupported Steer action. A steering failure could hide the
queued row and its error. A terminal event could also precede the final
provider result, and subtree Stop omitted the board actor.

**Expected behavior**

Stop ends the current execution. Once Paperclip proves that execution
has stopped, it delivers the saved instruction once through normal
admission. Pause and recovery holds still prevent dispatch. Unsupported
controls stay disabled, and a rejected action leaves an actionable error
visible. Final results precede terminal events.

**Steps to reproduce**

1. Start a Claude or Codex task that writes a file and then waits.
2. Send a follow-up instruction while it runs.
3. Press Stop. Check that the queued instruction runs once and preserves
the file.
4. Check Claude's Steer control and simulate a server rejection on the
only queued message.

## What Changed

- Recover saved native comments after acknowledged Stop using their
original wake reason.
- Require durable remote termination receipts or verified local process
termination before dispatch.
- Preserve actor identity, queued-message deduplication, Pause, and
recovery gates.
- Derive steering support from the driver descriptor and reject
unsupported calls.
- Keep the queue mounted until a steering request succeeds so its error
remains visible.
- Emit provider results before terminal events and pass the board actor
into subtree Stop.
- Document Stop and steering behavior.

## Verification

- Final-head continuation suite: 104 passed, after failing regressions
for saved wake reasons, cleanup proof, and deduplication of every queued
message. Steering UI: 121 passed. Driver capability: 26 passed. Runner
backend/transport: 205 passed; Rust library: 285 passed.
- Real Claude and Codex browser journeys both preserved the saved file,
delivered the queued instruction once after Stop, and reached Done with
exactly two total runs. The process Stop browser fixture also passed.
- Local full repository typecheck and build passed on `afaa35139`;
server typecheck and the affected 104-test suite passed after the final
queue changes. Token gates passed. Final-head CI verifies the complete
integrated source.
- Local aggregate evidence has explicit limits: the general-server
invocation overlapped the queue fixes and finished with 11,989 passed, 2
failed, and 80 skipped; both failures are covered by the final 104-test
pass. The UI and CLI then passed all 6,184 and 485 tests; the complete
145-file serialized rerun passed all 2470 tests. The shared-package lock
fixture passed unchanged on rerun, but the package phase subsequently
stopped at an embedded-Postgres bootstrap resource failure. No single
pristine green local full aggregate is claimed.
- Greptile reviewed `fa66e2bd5` at [5/5 with no unresolved
findings](https://github.com/paperclipai/paperclip/pull/13354#issuecomment-5650334242).
[Final-head CI completed
successfully](https://github.com/paperclipai/paperclip/actions/runs/34733781888/attempts/2):
33 successful checks, 2 conditional skips, including all server,
package, UI, browser, runner, typecheck, and build gates. The first
attempt hit a preview-readiness/port-collision fixture; its unchanged
local control passed 25 tests with 3 skips, and one supported unchanged
CI retry passed the affected shard and aggregate gates.

## Risks

- Queue recovery must never overlap an old execution. Unknown cleanup
state remains blocked.
- Driver descriptors are now authoritative for steering; a wrong
descriptor disables the action instead of attempting it.
- No schema migration or historical status reconciliation is included.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, code execution, browser
testing, and tool use. The exact hosted model ID and context-window size
are not exposed in this task.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` OR (b) described the issue in-PR following the relevant issue
template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-12 22:29:54 -05:00
DottaandPaperclip 6809314a3f fix: recover sandbox workspace setup and retries (#13353)
## Thinking Path

> - Paperclip manages AI agents and their tasks.
> - Sandbox tasks need a workspace and a provider session before work
can start.
> - A selected Git subfolder is a valid workspace, but it is not a
repository fetch source.
> - A resumed sandbox must keep one resource identity when the provider
fills in its region.
> - Workspace reuse does not prove that a provider session has started.
> - A recorded continuation must not leave an old failure blocking Retry
for a newer attempt.
> - This pull request fixes those setup and recovery boundaries while
preserving ownership checks.

## Linked Issues or Issue Description

**What happened?**

A Daytona task failed before provider startup when its project folder
was inside a parent Git repository. After the folder was repaired, Retry
resumed the same sandbox and verified its workspace sentinel, but
workspace preparation reported that the lease was no longer active. A
later attempt could fail because the resumed workspace had no provider
checkpoint. The old run also kept a recovery projection after the server
recorded its explicit successor, hiding Retry for the new failure.

**Expected behavior**

Sync the selected folder without importing parent files or history. Keep
the existing sandbox identity stable. Allow a new provider session only
with proof that its exact session has never started. Let the current
failed attempt retain Retry once the old recovery has a recorded
successor.

**Steps to reproduce**

1. Select a subfolder of a Git repository as a project workspace and
start a Daytona task.
2. Leave the target region unset. Release its reusable sandbox after
setup fails, then resume and realize the workspace.
3. Retry a provider setup that failed before any session directory or
checkpoint was created.
4. Record an explicit successor for a native failure, fail that
successor during setup, and inspect Retry in the task thread.

**Paperclip version or commit**

Reproduced against `8d1f0c20a` with new failing regressions before each
production fix.

**Deployment mode**

Local controller with a Daytona environment. Automated tests use
deterministic provider fixtures and real filesystem operations.

Related: #13338, #13163, #13264, #13349. The open work-folder stack in
#13264 includes a broader fresh-session authority change. This patch
addresses the independently reproduced startup failure with existing
durable bootstrap proof and atomic directory creation. It does not
include the work-folder migration or credential changes from that stack.

## What Changed

- Classify only the selected Git repository root as a fetch source. Sync
subfolders as directories and preserve their enclosing Git ignore rules
on upload and restore. Recognize the shared scheduler’s completed
non-repository result so ordinary folders still sync; timeout,
cancellation, and output-limit failures remain closed.
- Remove the placement target from Daytona account cache identity. Keep
API endpoint, credential digest, company, environment, driver, and
sandbox ID boundaries.
- Preserve closed-lease admission until a sentinel-verified resume
reopens that same resource.
- Show the already-recorded explicit successor of a resolved recovery.
Keep the old failure evidence and unresolved holds. No historical status
writes occur.
- Permit a resumed workspace to create a new session directory only with
matching durable identity, zero connections and events, untouched
bootstrap commands, no backup, and an absent remote session. Claim the
directory atomically. Existing, partial, or ambiguous state still blocks
startup.

## Verification

- Final head `c43c7403f`: [CI completed
successfully](https://github.com/paperclipai/paperclip/actions/runs/34733846820/attempts/2),
with 32 successful checks and 2 conditional skips. This includes every
server, UI, package, serialized-route, browser, native-runner,
typecheck, and build gate. Greptile reviewed the same head at [5/5 with
no unresolved
findings](https://github.com/paperclipai/paperclip/pull/13353#issuecomment-5650270168).
- New regressions failed before each of the four production fixes.
Git/archive/restore suites: 148 passed. The scheduler-wrapped non-Git
regression also failed before its fix; 135 affected Git/sync/Codex tests
then passed.
- Daytona plugin: 230 passed, 6 opt-in live tests skipped. Native
executor, projection, and TaskChatThread: 494 passed, including
existing/partial state, wrong identity, prior connections or turns,
backups, unavailable proof, and unresolved recovery controls.
- Local full-repository typecheck, build, and token gates passed on the
final head. Local CLI: 485 passed. Complete single-worker package rerun:
3,224 passed, 19 skipped.
- Local verification is an aggregate with recorded retries, not one
pristine green invocation: the general-server run began on `e721a920a`
and finished with 12,002 passed, 3 failed, 70 skipped. Its real Codex
scheduler failure is fixed above; the socket and workspace-runtime
timeout failures passed unchanged in focused reruns. Both Inbox failures
passed unchanged in the full 27-test Inbox file; database/shared-package
failures passed in the single-worker package rerun. The supplemental
local serialized-route rerun remains in progress; all five corresponding
final-head CI lanes passed.
- The first final-head CI attempt hit a Daytona fixture-readiness race
and a signoff-browser heartbeat receipt timeout. One supported unchanged
failed-job rerun passed both and the aggregate gates. Live combined
user-journey verification is tracked in the related follow-up; this PR's
provider tests use deterministic fixtures and real filesystem checks.

## Risks

- A selected subfolder uses directory sync and does not carry parent Git
history. Its ignored files stay local.
- The target region remains a creation setting and part of workspace
reuse policy; it does not split the account identity of an existing
sandbox.
- Incomplete or conflicting provider state still fails closed. This
change does not erase a session, infer completed work, bypass a user
decision, or replay uncertain actions.
- A later remote setup failure can leave a claimed partial session
directory. It remains blocked rather than being overwritten.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, repository tools, and code
execution. The exact hosted model ID and context-window size are not
exposed in this task.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` /
`Closes: #` / `Refs: #` OR (b) described the issue in-PR following the
relevant issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-12 22:19:42 -05:00
DottaandPaperclip 8d1f0c20af fix: let responsible users choose either AI subscription or API key (#13351)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - AI Connections select the account used for each run.
> - A responsible-user binding must follow the person whose work the
agent performs.
> - The saved sign-in method currently blocks users with another method
for the same provider.
> - This pull request resolves a personal default by company, user, and
provider.
> - Each user can use a subscription or API key with the same bot and
model.

## Linked Issues or Issue Description

Refs #13247, #13248, #13346, #13347.

**What happened?**
A bot configured with a Claude subscription rejects another responsible
user’s Claude API key. Inline repair also limits that person to the
original sign-in method.

**Expected behavior**
The same bot uses each responsible user’s default Claude account,
whether it is a subscription or API key. Explicit shared account
selections remain fixed.

**Steps to reproduce**
1. User A connects a Claude subscription and creates a bot using the
responsible user’s connection.
2. User C connects a personal Claude API key.
3. User C runs the same bot. Before this fix, credential resolution
fails.

## What Changed

- Add a personal provider-default table. Preserve legacy per-method
preferences and backfill the most recently updated preference, including
unavailable defaults. Repeated migration does not replace a selection. A
database trigger propagates old-server default updates without treating
new accounts as replacement defaults.
- Resolve responsible-user bindings by provider. Retain the method as a
wire compatibility hint for old servers. Explicit selections still
require the exact method and grant.
- Use the selected account’s method for credential isolation, refresh
locking, and run attribution.
- Update onboarding, agent setup, the picker, and inline task repair.
Keep existing authentication components and harness/model settings.
- Add mixed-method runtime, migration, repair, and Storybook coverage.
Include upstream’s duplicate Anthropic option fix through the base
branch.

## Verification

- Focused resolver, migration, connection-intent, onboarding, agent
setup, model, and connector UI suites: 331 tests passed.
- Onboarding and new-agent regression suites passed during the initial
focused run.
- UI typecheck, token gates, and Storybook build passed.
- Live browser checks passed for Claude and Codex API-default execution,
switching both back to subscriptions, and both existing shared-account
bots. Bot configuration remained unchanged.
- One Daytona startup command stalled before Claude launched. The test
run was cancelled, its sandbox stopped, and the same account/task passed
on retry. Startup cancellation remains a separate environment finding;
this PR does not change that command transport.
- Browser review: all eight assertions passed in the new mixed-method
story, including shared selection, return to responsible-user selection,
and unchanged harness/model.
- Repository build and typecheck passed after refreshing upstream
dependencies. Final resolver and historical rollback verification: 38
tests passed. All latest-head CI gates passed, including
server/workspace/serialized suites, browser E2E, build, typecheck, and
runner verification. The extra serial local full-suite run was stopped
after equivalent CI passed; focused local checks completed.

## Risks

- Users with both historical method defaults get their most recently
updated preference as the initial provider default. They can change it
explicitly in Connections.
- A revoked or unavailable default blocks. Connecting an additional
account does not silently replace it.
- Existing legacy authentication is unchanged. Managed responsible-user
bindings intentionally stop pinning a method.
- Live staging: the same Claude and Codex bots completed real API-key
runs after changing only the personal default, then completed
subscription runs after restoring the original defaults. Read-only
database verification confirms unchanged bot configuration and actual
method attribution. Distinct-user concurrency is covered by automated
real-database tests with synthetic credentials, not two live human
logins.

## Model Used

OpenAI GPT-6 (Codex), with reasoning, repository tools, code execution,
and browser interaction. The runtime does not expose a more specific
model ID or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-12 20:27:26 -05:00
DottaandPaperclip 422287eecd fix: preserve runner recovery, warm sessions, and task outcomes (#13338)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The native runner connects task messages, provider execution, and
task outcomes.
> - First-time user tests exposed gaps in recovery, completion
permissions, message delivery, and Stop behavior.
> - These gaps left usable output hidden, completed work waiting for
bookkeeping, or safe work unable to continue.
> - This pull request fixes the shared lifecycle and receipt paths while
preserving process ownership and action checks.
> - Users can continue work with accurate task state and durable
messages.

## Linked Issues or Issue Description

**What happened?**

A stopped local Codex execution could remain blocked even after its
processes had stopped and its complete transcript proved that no
external action needed replay. Claude under Conservative permissions
could fail to call task completion tools. Recovery could reuse an
assistant item ID and overwrite prior output. A delivered comment could
remain marked uncertain after navigation. Stop could look like Pause or
a new recovery incident. Workspace contention could look like
cancellation. A direct reply reopening Done could enter a clarification
loop.

**Expected behavior**

Recover automatically only with verified termination and complete action
receipts. Preserve answers and messages. Keep task completion available
under Conservative permissions without broad tool access. Show crashes
as Blocked, actual human decisions as In Review, and ordinary workspace
contention as waiting. Stop the current response and allow a new
direction.

**Steps to reproduce**

1. Create ordinary response tasks with local Codex and Claude Code, then
send follow-up messages through the task composer.
2. Interrupt a disposable local Codex runner during text-only work.
Verify automatic continuation and retained output.
3. Stop a response, send a new request, answer a clarification, and
reopen completed work with another message.
4. Navigate or reload while a comment submission is pending. Confirm the
exact persisted request receipt settles it without removing newer draft
text.
5. Run two tasks in a shared Daytona workspace. Confirm waiting does not
appear as failure.

**Paperclip version or commit**

Initial acceptance baseline: `c9021c6721f91e2c74bd9fee9d3fd41c999d17b7`.
Current integration base: `6cef9743c`. Both operator-interruption and
workspace-waiting guards are preserved; native restart and legacy
permission rules remain documented.

**Deployment mode**

An isolated source-built test-drive instance, with real local Codex and
Claude Code providers and disposable Daytona environments.

Related work: #13314, #13316, #13327, #13344, #13239, #13254, #13163.
This PR addresses additional failures from ordinary task journeys,
including controller restart handoff and repeated warm sandbox setup.
Historical task status reconciliation is excluded.

## What Changed

- Persist runner ownership immediately at spawn and resume an explicitly
adopted runner even when the controller crashed before the first driver
checkpoint. Detach the controller safely across graceful restarts,
including session startup. Prevent an old finalizer from suspending or
signaling an adopted runner. Checkpoint idle warm sessions before
shutdown. Preserve the same run and queued follow-up messages.
- Scope saved legacy queue successor checks to the queue owner while
preserving ordinary task locks, operator identity, assignment gates, and
exactly-once delivery.
- Preserve managed Codex credential files when an old session is
detached for restart; normal owned cleanup still copies refreshed auth
back and removes the scoped copy.
- Reuse the bound warm shared sandbox and fully verify an existing
staged provider pack before using it. This avoids repeated uploads when
the pack is already valid.
- Add a narrow local Codex replacement path with stopped-process proof,
a closed transcript inventory, exact completion receipts, and
fresh-session lineage. Preserve no-replay holds when evidence is
incomplete. Recovery may clear only the same run's recorded Blocked
status version; manual re-blocking and dependency changes invalidate
that receipt, while queued comments do not. Later blocks stop scheduled,
queued, and final dispatch; queued/final checks re-read dependencies
even when the task status stays In Progress.
- Permit only task delivery and human-input tools through the isolated
Claude runner's exact task bridge.
- Scope assistant item identity to the provider turn and ignore only
authority-free Codex skill-change notifications during startup.
- Reconcile composer submissions by client request ID across response
loss, navigation, and reload. Retain text typed during delivery.
- Keep acknowledged run-only Stop neutral and show workspace contention
as waiting. Project exhausted native failures as Blocked.
- Restore the guarded task-page retry action for failed legacy runs,
including the server-supported explicit new-attempt path for stopped
conversation adapters. Preserve native/process recovery holds and avoid
promising Retry while a decision or execution gate hides it.
- Refresh delivered artifacts and handle direct user replies that reopen
completed work without a clarification loop.
- Check the embedded PostgreSQL PID, data directory, and actual port
before connecting or migrating.
- Document accepted behavior and add focused regressions at lifecycle,
route, transcript, and UI boundaries.

## Verification

- Final head `fece606ac2` passes the complete GitHub CI matrix: **34
green checks, two expected Storybook skips, no failures or pending
checks**, including `ci / verify`, `ci / e2e`, full runner verification,
typecheck, build, every server/workspace shard, and all browser shards.
[CI
run](https://github.com/paperclipai/paperclip/actions/runs/34727183287).
Greptile is **5/5 with no open findings**. The final two commits only
refine test fixtures; both affected suites pass 24/24 locally and in CI,
with server typecheck green.
- Complete local Vitest coverage uses the canonical groups/shards: all
635 general server suites, all 145 serialized suites, and all workspace
packages. The aggregate began on `0a8001c18` while the final queue fix
arrived: 23,903 passed, five failed, 87 skipped. The five
port/socket/timing failures passed unchanged in follow-ups (60 tests in
the exposure/file suites and 412 tests covering the serialized failures
and unrun tails). The final queue/operator-identity suites separately
passed 52/52. This is aggregate coverage plus explicit reruns, not a
pristine single-command final-head run.
- After integration with current master,
queue/operator-identity/continuation suites passed 162/162 and affected
UI suites passed 140/140. ACP Stop/continuation and legacy
task/Inbox/message browser suites passed 9/9, including both task
recovery Retry and thread Try again, automatic saved-message delivery,
exactly one new run, Done, and retained output after reload. The default
process Stop/Pause/Resume browser case passed (the native-provider case
is opt-in and skipped by default). The complete Board attachment/receipt
browser suite passed 11/11 on a disposable instance, covering both
composers, exact receipts after lost responses, no replay, bound
attachments, and newer drafts after reload.
- Blocking-intent regressions cover pre-existing Blocked, a mismatched
run/cause, an explicit manual re-block, changed dependencies, a queued
comment after failure, and a block arriving between scheduling and
provider dispatch. The negative cases reproduced before the fix. All 478
affected executor/recovery/dispatch tests passed; both database suites
ran separately after availability-probe skips in the first combined
command. The final late-dependency check passed all 143 affected
recovery/dispatch tests (zero skips) after two new negative cases
reproduced the bug.
- Focused runtime regressions cover awaited runner ownership
publication, authenticated adoption before the first checkpoint,
old-finalizer detachment, idle and busy warm-session shutdown, rejected
checkpoint propagation, provider-pack verification, and managed-Codex
credential preservation. Four managed credential detachment cases
reproduced the bug before the fix; normal owned cleanup still succeeds
exactly once.
- Live local Claude: SIGKILL 2.6 seconds into startup recovered the same
run automatically in 53 seconds, then a normal follow-up completed in 24
seconds. SIGTERM 2.5 seconds into startup preserved the same run (54
seconds) and its queued follow-up (21 seconds). Answers remained visible
and the task reached Done.
- Live Claude Daytona: a warm follow-up retained its sandbox and fell
from 121 seconds to 44 seconds. A separate cold turn took 127 seconds;
after controller shutdown and checkpointing, its follow-up completed in
33 seconds with the same sandbox, workspace, native session, and runner.
Both answers remained visible and the task was Done.
- Other live journeys covered task completion and follow-up with local
and Daytona Codex, local Codex crash recovery, Stop then new direction,
clarification response, live artifact refresh, and shared-workspace
waiting.
- Validation limits: the opt-in native composer Stop/Pause→subtree
Resume fixture exposes terminal/result ordering and subtree-cancellation
attribution bugs that can leave a child task blocked; that new finding
is assigned to a separate follow-up and is not claimed fixed here.
Default CI skips this optional native-provider fixture. Managed-Codex
credential handoff and the queue-agent integration use automated
regression evidence. Cold custom provider-pack uploads still add startup
latency.

## Risks

- Automatic replacement remains deliberately narrow: local Codex,
verified stopped identities, unchanged retained state, and a complete
text/completion-only turn. Unknown actions, partial history, or changed
ownership remain blocked.
- Claude completion permission handling changes an upstream package
patch. The exact isolated task bridge must remain pinned; unrelated
tools keep their existing permissions.
- New task failure projection changes user-visible status. No historical
status backfill or database migration is included.
- This is a broad lifecycle fix across server and UI. Live proof covers
graceful local Claude restart during startup and idle Claude Daytona
session recovery across controller shutdown. Live abrupt SIGKILL during
local Claude startup also recovered the same run. Unknown ownership or
missing action evidence still blocks reuse. Cold custom provider-pack
uploads still add startup latency; this change avoids unnecessary repeat
uploads.

## Model Used

OpenAI GPT-6 (Codex), with reasoning, code execution, browser
automation, and tool use. The exact hosted model ID and context window
are not exposed in this task.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-12 19:41:15 -05:00
DottaandPaperclip 13bae6fa21 fix: reject unsupported REST tool connections without stdio validation (#13346)
## Thinking Path

> - Paperclip manages AI agents and their connections.
> - Connection checks must use the configured transport.
> - The tool service treated every remaining transport as local stdio.
> - Anthropic's old REST method therefore failed with a templateId
error. A REST connection with a valid stdio template could incorrectly
pass.
> - Anthropic now has a supported AI-account flow. This pull request
removes its obsolete REST setup option and limits stdio checks to stdio
connections.
> - Users can connect an AI account, and existing unsupported
connections receive an accurate error.

## Linked Issues or Issue Description

Related: #13248 added the supported AI-account flow. Searches for
related REST health and templateId bugs found no duplicate fix.

**What happened?**

The Anthropic REST API-key connection showed `Local stdio MCP
connections must use an approved templateId`. Health checks and catalog
discovery both fell through to the local stdio path. A REST connection
with an approved template could report success and expose the template's
catalog without a REST integration.

**Expected behavior**

Only local stdio connections use command templates. Unsupported
transports return an accurate HTTP 422 error. New Anthropic accounts use
the supported runtime authentication flow.

**Steps to reproduce**

1. Check out the test-only commit `924e6e85a` in a separate worktree and
install dependencies.
2. Run `pnpm exec vitest run packages/shared/src/app-definitions.test.ts
server/src/__tests__/tool-access-service.test.ts -t 'unsupported
REST|obsolete Anthropic'`.
3. The tests exercise saved Anthropic REST configuration and an
unsupported REST connection containing an approved stdio template. They
cover health checks and catalog discovery separately.
4. Run the same tests on the fix commit. They pass. The full affected
files also pass.

**Paperclip version or commit**

Reproduced against master `6cef9743c`.

**Deployment mode**

Server transport handling. Reproduced with an isolated embedded
PostgreSQL test database. No provider account or live credentials are
required.

## What Changed

- Restrict stdio health checks and tool discovery to `local_stdio`.
- Return and audit `tool_connection_transport_unsupported` with HTTP 422
for unsupported tool transports.
- Remove Anthropic's obsolete REST method from the generated catalog and
its durable ingestion source. Keep its subscription and API-key AI
methods.
- Cover the reported error, false-success case, rejected obsolete setup,
connection removal, and the UI's AI-account submission path.
- Replace impossible reconnect forms for removed methods with supported
setup, while preserving connection removal.
- Preserve AI-versus-tool intent isolation for legacy requests and
reject new unsupported Anthropic tool requests.
- Document recovery for existing unsupported connections.

## Verification

- Clean-worktree red/green: the same command failed all six regression
cases at `924e6e85a` and passed all six at `4d3de9de0`. The failing run
includes the reported templateId error.
- Green: all 555 tests across the six affected test files passed.
- Recovery UI red/green: three added cases failed before the recovery
fix and passed afterward; all 200 tests across setup, detail, and
advanced controls passed.
- After the recovery UI update, UI typecheck/build and token gates
passed again.
- `pnpm -r typecheck` — passed.
- `pnpm build` — passed.
- `pnpm check:token-gates` — passed.
- Catalog regeneration — passed with the documented
`PAPERCLIP_CONTENT_TEMPLATES` override for the local capture corpus.
- Full CI on `69fb31fd4` — passed all general and serialized test
shards, browser shards, typecheck, build, runner verification, and
canary dry run:
https://github.com/paperclipai/paperclip/actions/runs/34726975425.
- The local serial `pnpm test:run` was stopped after the fixture
correction superseded that run; full-suite verification above comes from
CI. All 555 affected tests passed locally, including all 17
connection-intent tests after the correction.
- Greptile — 5/5, successful check on final commit `69fb31fd4`, no
unresolved findings.
- No live Anthropic validation was performed. The UI regression uses a
fake key and a mocked AI-account response.

## Risks

Existing obsolete REST connections remain in needs-attention state.
Users must add an account through the supported flow and remove the old
connection. Credentials and grants are not transferred automatically.
Removal remains covered. The specialized AgentMail and Composio paths
keep their existing behavior. There are no schema or permission changes.

## Model Used

OpenAI GPT-6 through Codex. The exact serving model ID and
context-window capacity are not exposed in this session. Used reasoning,
code editing, shell tools, and test execution.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-12 19:26:58 -05:00
DottaandPaperclip e704e1c9ae fix: keep AI subscription locks safe through transaction pooling (#13347)
## Thinking Path

> - Paperclip manages AI agents and their credentials.
> - AI Connections must preserve account ownership from login through
execution.
> - A subscription environment check can pass and leave a session
advisory lock on a pooled database backend.
> - The next execution then reports that the subscription is busy.
> - Onboarding can also lose its completion callback when the connection
list refreshes before the login poll.
> - This change keeps each credential lease in one transaction and keeps
the login controller mounted until completion.

## Linked Issues or Issue Description

Refs: #13247, #13248, #13344.

**What happened?**

A real hosted subscription login saved successfully and passed its
environment check. The first task then failed with an AI connection busy
error. A connection-list update could also leave onboarding on
Connecting.

**Expected behavior**

A completed environment check releases its credential lease. A saved
login completes onboarding without another sign-in.

**Steps to reproduce**

1. Run Paperclip with a transaction-pooling PostgreSQL proxy.
2. Connect a Claude subscription through onboarding and reuse it for an
agent.
3. Start a task after its environment check succeeds.
4. For the UI race, refresh the managed connection list before the login
completion poll.

## What Changed

- Hold the grant lock inside one transaction. Roll back on cleanup or
failed acquisition.
- Disable the lease transaction's idle timeout so long provider
executions retain the lock.
- Keep the onboarding login controller mounted while its authorization
URL is active; restore saved-account retry if later agent creation
fails.
- Add lock-lifetime and Claude/Codex completion-order regressions.
- Document the pooling requirement.

## Verification

- 104 focused connection and onboarding tests passed.
- Workspace typecheck, production build, Storybook build, and token
gates passed.
- All 34 latest-head checks are terminal: 32 passed and two Storybook
workflows skipped by their normal filters. CI covers all
server/workspace/serialized test shards, browser tests, typecheck,
build, runner verification, and canary packaging. The additional local
full-suite run is still in progress.
- Real browser sign-ins saved Claude and OpenAI subscriptions on both
new and existing staging stacks. On the patched new stack, both
providers completed tasks and immediate repeat executions with the same
saved accounts. Read-only database inspection confirmed live
transaction-scoped locks and no remaining locks after completion. On the
final deployed head, both shared accounts on the existing stack also
completed actual tasks. Both personal accounts passed a fresh
environment check followed immediately by execution after a deployment
restart.

## Risks

- Each active subscription reserves one database connection and holds an
otherwise idle transaction until cleanup. This is required to pin the
backend through a transaction pool.
- Old session locks from earlier versions may need operator cleanup
after active runs drain. This change does not bypass existing locks.
- No database migration, credential routing, or legacy authentication
change.

## Model Used

OpenAI GPT-6 in Codex, with code execution and browser tools. The exact
deployment model ID and context-window size are not exposed to this
task.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-12 19:05:18 -05:00
DottaandPaperclip 6cef9743c0 fix: deliver saved user messages after recovery stops (#13327)
Deliver saved user messages after legacy recovery stops. Validate undelivered comments and queue ownership under the task lock, preserve the operator identity checks from #13315, and prevent duplicate successors.

Add a recovery notice with Retry and inline errors, plus service, route, component, and browser coverage.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-12 18:08:04 -05:00
DottaandPaperclip b2acc674be fix: enable isolated subscription login on authenticated self-hosted instances (#13344)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - AI Connections store reusable provider credentials with company and
owner boundaries.
> - Self-hosted instances can require board authentication while running
agents on the local server.
> - The login UI treated those instances as unsupported and displayed
instructions without a command.
> - Removing that restriction must not expose the server operator's
existing CLI account.
> - This pull request enables owner-scoped login attempts and reuses the
existing login UI.
> - Users can connect Codex and Claude subscriptions on an authenticated
self-hosted instance.

## Linked Issues or Issue Description

**What happened?**

On an authenticated self-hosted instance, OpenAI subscription setup
displayed terminal instructions with no command and a disabled Connect
button. Claude also could not complete the local connection flow.

**Expected behavior**

An authorized board user can prepare an isolated sign-in attempt, sign
in on the server, and save the verified account as a Connection. This
must not import another user's or the operator's ambient credentials.

**Steps to reproduce**

Run Paperclip in authenticated mode with a local environment. Open
Connections, choose OpenAI or Anthropic, and select Subscription. The
previous UI never enabled local login preparation.

Related: #13247, #13248, and #10751. This fix preserves the restriction
on remote access to the operator's ambient Claude login.

## What Changed

- Allow company-authorized users to create, check, cancel, and complete
their own isolated local login attempts.
- Keep ambient Claude credential import restricted to the local
operator.
- Support isolated Claude credential files without falling back to the
host account or mutating process-wide environment variables.
- Use Codex device authorization so sign-in does not depend on a browser
callback to the remote server's localhost.
- Gate server-host login on authenticated public deployments unless a
trusted runtime host is configured. Publish the capability through
health so setup shows supported alternatives.
- Read isolated Claude credential files through bounded,
descriptor-bound opens with ownership, permission, and symlink checks.
Try the alternate filename after malformed JSON.
- Reuse shared login instructions and lifecycle hooks in onboarding,
agent setup, and Connections. Show health-query failures explicitly.
- Document authenticated self-hosted behavior and add authorization,
isolation, lifecycle, and UI regression tests.

## Verification

- Passed 71 focused tests across connection routes, credential
isolation, legacy compatibility, the shared login hook, and agent setup.
- Passed 89 onboarding regression tests.
- Passed `pnpm -r typecheck`, `pnpm build`, Storybook build, and `pnpm
check:token-gates`.
- Completed real Codex device authorization and Claude browser
authorization on an authenticated Linux self-hosted instance. Both
accounts were detected automatically and saved as Connected. Both
completed attempt directories were removed.
- These live checks cover login, credential validation, and connection
creation. They do not establish a new model execution or long-running
refresh result.
- Review follow-up: 68 focused checks passed after rerunning one route
socket error; the full route/health rerun passed all 49 tests. The
70-test onboarding suite also passed. Final workspace typecheck,
production build, and Storybook build passed again.
- The broad local run exposed an instance-name assumption in two new
assertions. The fixture now uses an explicit non-default instance, and
all 32 connection tests passed with a different inherited instance name.
The superseded broad run was stopped; this is not a claim that the full
local suite completed. Full CI results will be recorded before merge.

## Risks

- The server must have the provider CLI installed. Users still run the
displayed command on the server that hosts Paperclip.
- Authorization checks must keep login attempts scoped to the company,
owner, provider, and reconnect target. Regression tests cover cross-user
and cross-company access.
- Existing local-trusted Claude behavior stays available. Authenticated
remote users cannot use its ambient import path.
- No database migration, dependency change, agent binding change, or
provider routing change is included.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, code execution, and browser
tools. The runtime does not expose a more specific model version or
context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-12 23:06:55 +00:00
DottaandPaperclip df984cbc2c fix: dispatch queued legacy messages with operator identity and task permissions (#13315)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Task conversations save messages that arrive during an active turn.
> - Legacy adapters deliver these messages in a later turn.
> - A run can stop before the saved queue is delivered.
> - The Interrupt button previously required an active run, so it could
not release this queue.
> - This pull request lets a board operator send the saved queue after
the run stops and retries queues missed during finalization.
> - Manual dispatch must use the clicking operator and must not require
permission to create agents.
> - The task can continue without a duplicate message or a second
execution owner.

## Linked Issues or Issue Description

**What happened?**

A legacy task retained a queued message after its run stopped. Interrupt
was disabled because the queue had no active target. Finalization and
deferred message admission can also leave a queue without a successor.

**Expected behavior**

Interrupt sends the saved messages when no runner is active. Messages
that arrive during normal completion are delivered automatically. An
uncertain previous execution still requires proof that its process or
sandbox stopped.

**Steps to reproduce**

1. Queue a user message during a legacy conversation turn.
2. Let the turn stop or simulate a server restart before queue
promotion.
3. Open the task with a deferred queue and no active run.
4. Try Interrupt. Before this change, the button is disabled.

**Paperclip version or commit**

Reproduced against `8f40b4ad4`.

**Deployment mode**

Legacy conversation adapter. The same persisted queue state is covered
with an isolated PostgreSQL fixture.

Related public work: #13275 adds active legacy interruption. #13291
addresses automatic sandbox conversation recovery. This change handles
explicit saved-queue delivery and late queue promotion.

## What Changed

- Accept a null Interrupt target while retaining queue identity,
revision, company, and assignee checks.
- Save the operator's request on the existing queue. Reuse normal
admission after verified stop, including older messages, different
authors, and queues whose original wake came from the system.
- Strip interruption authority from caller-supplied wake payloads. Only
the board queue route can persist that authority.
- Retry durable interruption requests after restart and deferred queues
after legacy cleanup.
- Let an explicit Interrupt retry cleanup for its stopped run, including
old ephemeral leases that recorded success without a provider stop
receipt. Preserve retained resources, other lease owners, and the
automatic retry limit.
- Preserve the server's waiting explanation when normalizing and
combining queue entries.
- Revalidate the consumed board queue receipt at dispatch so a different
message author does not cause setup failure.
- Use the Interrupt user's execution identity for the new run. Preserve
original message authors. Validate the receipt independently at startup
and inherit the resulting identity on retry.
- Persist authenticated board authority for ordinary manual wakes too.
Adopting someone else's queued messages cannot switch a manual run to
that author's permissions. Strip caller-supplied authority markers and
retain private conversation ownership checks.
- Keep the clicking user when a manual wake is merged into an older
deferred receipt. Update its requester and payload in the same
transaction.
- Use the same current-queue/revision API on task details and pipeline
conversations; show Interrupt after a legacy target stops.
- Keep manual wakes out of active runs, including unscoped agent wakes.
They receive their own execution identity; a matching receipt requester
is not sufficient because an exact retry can retain a different
originating identity.
- Authorize both existing-agent wake endpoints with `agent:wake`,
available to active non-viewer company members. Keep `agents:create` for
hiring. Validate the stored task and current assignee before an exact
task retry.
- Reject viewer Interrupt requests before saving intent or stopping
execution. Keep external chat retry authorization and per-action
agent/user permission checks.
- Preserve edits and discards until dispatch. Prevent another queue
promotion when the same agent already has a successor. Keep independent
reviewer recovery available.
- Suppress cancelled/failed run toasts for intentional operator
interruption. Keep ordinary runtime error notices.
- Add UI, route, admission, restart, successor ownership, and toast
regression tests. Document the behavior.
- Reuse the existing socket reservation helper for both
credential-quorum test cases after CI exposed an ambient-port collision.
This changes test preparation only; production credential staging is
still called exactly once.

## Verification

- Failing regression tests reproduced the message-author identity bug
and an operator's `agents:create` rejection before the fixes.
- All 316 focused tests pass across eight route, queue, identity,
authorization, continuation, and responsible-user suites, including the
44-test rerun of queue admission and actual startup after the final
manual-wake restriction. Regressions reproduce cross-user merging both
with and without a task, and same-requester receipt ambiguity. The
cross-company existence guard also passes both tests.
- Startup integration tests reach adapter execution under the clicking
operator and retain that identity through follow-up. Coverage includes
mixed authors, adopted queues, system-origin queues, restarts, forged or
stale receipts, viewers, suspended memberships, changed assignees,
private conversations, and caller-supplied authority markers.
- The earlier queue/cleanup/UI regression suite passed 402 tests. The
final review corrections pass another 180 tests across queue
admission/persistence, real heartbeat startup, UI API, conversation
rendering, and pipeline suites. Regression tests reproduced both review
findings before correction. The final head has a 5/5 review with no
unresolved threads. Full CI passes on `c2002979c`, including every
general and serialized server shard, all browser shards, Paperclip
Runner verification, typecheck, build, canary dry run, and the aggregate
gates.
- Full `pnpm -r typecheck`, `pnpm build`, and UI token gates pass after
the final application changes. CI identified an outdated task-page API
mock after the shared helper extraction; the fixture now exercises the
real helper, and all 131 task-page/API tests pass. The final application
build passes with the additional manual-wake restriction.
- CI exposed a pre-existing port collision in the Codex
credential-quorum fixture. It reproduced locally; both listener cases
now use the existing bounded reservation helper. All 41 credential tests
pass on rerun. One intervening local run hit a separate ambient bind
collision in the two-occupied-port case.
- The full local `pnpm test:run` attempt was stopped after host
contention caused focused-suite timeouts. The affected focused tests
passed on rerun. An expiring trace fixture and a missing
private-conversation state were corrected. The successful full CI run is
the complete-suite verification.
- Hosted Interrupt previously cleared the original queue and produced
exactly one successor with neutral interruption feedback. It exposed the
dispatch authorization defect. Retry on that earlier build was rejected
for missing `agents:create` before creating another run.
- Deployed the final application build (`38257f391`) to the scoped
hosted instance and verified readiness. The latest PR commit changes
only the credential test fixture; application code matches that
deployment. A live Retry by the same operator without `agents:create`
created one successor attributed to that operator, passing the former
dispatch permission gate. Startup then stopped at
`configuration_incomplete` because that operator has not configured
their required personal Claude Code OAuth secret; the post-deployment
run page confirms the operator identity and no provider work started,
and the My secrets UI still shows the token as not set. Provider
execution remains unverified pending that credential. No permission
grants or credentials were changed.

## Risks

Queue admission and finalization can race. The task lock, durable queue
receipt, current comment IDs, and successor guard prevent duplicate
dispatch. Process and lease stop checks, task pauses, approvals,
ownership, and budgets remain in force. The API change only allows null
on legacy Interrupt; native steering still requires an active run. No
schema migration is required. Active non-viewer board members can now
invoke existing agents without agent-creation permission. Agent
self-invocation rules, raw provider-trace admin access, task retry
scope, external chat authorization, and action-specific user/agent
permissions remain enforced.

## Model Used

OpenAI GPT-6 through Codex. The session does not expose an exact backend
model ID or context-window size. Used reasoning, repository search, code
execution, tests, and browser tools.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` OR (b) described the issue in-PR following the relevant issue
template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-12 17:11:30 -05:00
DottaandPaperclip 8d6232e7b0 feat: reuse provider sign-in across AI connection workflows (#13248)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Users connect provider accounts during onboarding and agent setup.
> - They should reuse and manage those accounts through the existing
Connectors interface.
> - A second login wizard would diverge from the established provider
workflows.
> - This pull request composes the existing sign-in components into
Connections and agent configuration.
> - Users can select accounts without changing their agent's harness or
model.

## Linked Issues or Issue Description

**Problem or motivation**
AI credentials are configured separately from Connections. Agents cannot
consistently reuse a responsible user's account or a permitted shared
account.

**Proposed solution**
Manage AI accounts with the existing Connections grants and permissions.
Keep model and harness selection independent from credential selection.
Preserve legacy authentication until validated adoption.

**Alternatives considered**
A separate credential registry would duplicate ownership and access
policy. Automatic fallback would risk using the wrong account.

**Roadmap alignment**
This extends the shipped Apps, multi-user, secrets, and agent-runtime
capabilities. The maintainer requested the feature and reviewed the UI.
Related groundwork: #11899 (connection permissions), #10910 (connection
wizard), #11692 (Claude subscription profiles), and #11854 (Codex
account rotation).

## What Changed

- Add compact AI-account management to the existing Connectors pages.
- Reuse AgentProviderConnection, AdapterLoginPanel, AdapterLoginChrome,
and authentication controllers.
- Add the shared connection picker to agent setup/settings and task
requests.
- Preserve onboarding's sequence and reuse existing accounts.
- Add local-login recovery, retry, cancellation, and React StrictMode
handling.
- Add interactive Storybook scenarios, design-guide examples, and app
acceptance checks.

This is part 2 of the AI Connections change. The runtime foundation in
#13247 is merged. This PR now targets master.

## Verification

- Updated against master `47ded8bf9`, including the landed runtime
foundation and upstream task-search changes.
- Full workspace typecheck, production build, Storybook build, and token
gates passed on the integrated branch. Final local-login changes passed
59 focused tests; new-agent and inbox regression suites passed 63 tests.
- Browser checks verified automatic local Claude account detection,
resumable Codex login commands, retry, focus restoration, and
desktop/phone layouts. Commands create their isolated directory before
invoking the CLI.
- All CI test, browser, build, packaging, and runner jobs passed on
final head `dd17d3211931dd70aaa6ea619d83a7f9966dd18e`. The fresh
Greptile review is 5/5, the security scan passed, and there are no
unresolved review threads. The final CI aggregate gates passed.
- Local general-server coverage passed 11,804 tests; three
port-collision failures passed in an isolated 25-test rerun. All 6,111
UI tests passed. CLI coverage passed 484 tests; its remaining doctor
test requires port 3199, which is occupied by an unrelated report server
on this Mac. The complete CLI suite passed in CI.
- Live browser testing verified Codex API-key reconnect inside a task
card on desktop and phone. Real provider runs resumed and completed with
unchanged connection/grant identity and agent routing.
- Tested opening, cancelling, reopening, and completing connection
creation. A regression confirms Connect another account cannot submit
the new-agent form or copy provider keys into agent settings.
- Added shared inline repair, automatic local sign-in checks, and
responsive connection dialogs. Standalone Daytona installation ignores
workspace configuration and suppresses dependency scripts. Its
standalone build also passed with CI's exact pnpm 9.15.4.
- Destructive live tests are excluded by default. Explicit opt-in, local
deployment checks, and matching disposable fixture identities are
required before any mutation.

## Risks

- Local Codex/Grok creation requires the connection-specific terminal
login command.
- Browser sign-in uses the existing supported-environment controllers.
- This update verifies live local Claude detection and Codex API-key
task repair. New subscription authorization/refresh and
independent-human/native-runner isolation were not reverified in this
update.
- No agent automatically adopts managed Connections.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, repository tools, code
execution, and browser testing. The exact runtime model identifier and
context-window size are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-12 16:51:26 -05:00
DottaandPaperclip 47ded8bf97 feat: manage AI runtime credentials through Connections (#13247)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Agent runs need credentials for a specific provider and sign-in
method.
> - Connections already owns accounts, grants, and access permissions.
> - AI authentication should use those same boundaries.
> - This pull request adds the storage, API, adoption, and runtime
foundation.
> - Legacy agents keep their authentication until they explicitly adopt
a managed connection.

## Linked Issues or Issue Description

**Problem or motivation**
AI credentials are configured separately from Connections. Agents cannot
consistently reuse a responsible user's account or a permitted shared
account.

**Proposed solution**
Manage AI accounts with the existing Connections grants and permissions.
Keep model and harness selection independent from credential selection.
Preserve legacy authentication until validated adoption.

**Alternatives considered**
A separate credential registry would duplicate ownership and access
policy. Automatic fallback would risk using the wrong account.

**Roadmap alignment**
This extends the shipped Apps, multi-user, secrets, and agent-runtime
capabilities. The maintainer requested the feature and reviewed the UI.
Related groundwork: #11899 (connection permissions), #10910 (connection
wizard), #11692 (Claude subscription profiles), and #11854 (Codex
account rotation).

## What Changed

- Add AI-purpose/runtime-auth contracts and an additive, idempotent
migration.
- Add Claude, OpenAI, OpenRouter, and Grok provider capabilities and
catalog entries.
- Store credentials on grants. Resolve responsible-user defaults or
explicit permitted grants.
- Isolate managed credentials and provider sessions across accounts.
Block missing credentials without ambient fallback.
- Keep imported legacy secrets unchanged during reconnect. Use
independent local Codex/Grok sign-in attempts for rotating credentials.
- Add authorization, migration, concurrent refresh, retry, cancellation,
and legacy-compatibility tests.

This is part 1 of a two-PR stack. The app UI follows in #13248. Merge
the foundation first.

## Verification

- Updated against master `04e364236`, preserving upstream provider login
and connector workflows.
- Full workspace typecheck, production build, Storybook build, and token
gates passed on the integrated branch. Final local-login changes passed
59 focused tests; new-agent and inbox regression suites passed 63 tests.
- Browser checks verified automatic local Claude account detection,
resumable Codex login commands, retry, focus restoration, and
desktop/phone layouts. Commands create their isolated directory before
invoking the CLI.
- All current-head CI checks passed on `2a996560a`, including all
server/workspace tests, browser shards, runner verification, typecheck,
build, and canary dry run. Greptile reviewed that commit at 5/5 with no
unresolved threads. Earlier local full-suite attempts hit the Mac
PostgreSQL shared-memory limit; the complete suites passed in CI.
- Renumbered the additive AI migration to `0276` after upstream
migrations and regenerated its snapshot. Existing legacy agents retain
their configuration.
- Added local login status checks, owner-scoped retry, managed OpenCode
remote homes, credential-aware model discovery, and task
connection-repair delivery.

## Risks

- Managed credential failures intentionally block execution. They do not
restore legacy fallback.
- Preview-era copied Codex/Grok subscriptions require independent
reconnect.
- The integrated branch has live provider acceptance coverage. This
update verifies local Claude detection and Codex API-key task repair; it
does not add a new subscription authorization/refresh or Daytona stress
pass.
- Runtime-auth connections must stay excluded from tool and channel
handling.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, repository tools, code
execution, and browser testing. The exact runtime model identifier and
context-window size are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-12 16:30:10 -05:00
DottaandPaperclip 1652a5c7f2 fix: improve task search relevance with a PostgreSQL rubric (#13335)
Unify full and quick task search around PostgreSQL term coverage, explicit relevance bands, and conservative typo recovery. Preserve matching evidence and navigation, and add a judged corpus, regression tests, and documented performance measurements.

Validation: local typecheck, build, focused PostgreSQL tests, and task-list tests pass. All final-head CI gates pass and Greptile is 5/5.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-12 16:22:58 -05:00
DottaandPaperclip 4d317274ce feat(channels): add experimental iMessage Photon (#13299)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Channels connect external conversations to company tasks and agent
execution.
> - Slack, Discord, and AgentMail already provide durable delivery and
access controls.
> - People also need to reach an agent from Apple Messages and send
photos.
> - Photon provides shared Pro DMs, dedicated numbers, and authenticated
event recovery.
> - This pull request connects Photon to the existing channel services.
> - People can message an agent while Paperclip retains task ownership
and approval authority.

## Linked Issues or Issue Description

**Subsystem affected**

Cross-cutting: channel services, shared contracts, database constraints,
Apps, and agent Channels UI.

**Problem or motivation**

Paperclip has no iMessage channel. A person cannot use Apple Messages to
start a task, send a photo, or answer an agent's pending question.

**Proposed solution**

Add experimental **iMessage Photon** with Pro-compatible shared DMs or a
dedicated Photon Cloud number per agent channel. Reuse channel
admission, identity links, task generations, publication, and
interaction continuation. Keep groups disabled for shared allocation.
Dedicated lines support groups that an operator explicitly enables.
Require a fresh linked message and a published agent response before
setup completes.

**Alternatives considered**

Shared allocation has no owned phone number, so it reserves one project
and allows DMs only. Dedicated allocation reserves one stable number.
Local Mac access needs a separate deployment model. The upstream Photon
Chat SDK adapter does not persist the poll mappings and send receipts
required here. This change uses the lower-level SDK without adding
another agent runtime.

**Roadmap alignment**

This extends Connected Apps and agent communication through the existing
channel subsystem. It does not add a parallel tool connection or agent
loop. GitHub searches for Photon and iMessage found no matching provider
implementation.

**Additional context**

This ships behind the existing experimental channel gate. Dedicated-line
release qualification remains incomplete. Real Photon Pro DMs passed
task/reply, native poll, text answers, confirmation rejection, media,
restart, pause, reconnect, revocation, and removal tests. An
operator-supplied iPhone camera HEIC also passed the full round trip.
Dedicated groups remain unqualified. See [the verification
record](doc/connections/IMESSAGE-PHOTON-VERIFICATION.md) and [the
implementation plan](doc/plans/2026-09-11-imessage-photon.md).

## What Changed

- Add the provider catalog entry, shared setup contracts, and a forward
migration. A global partial index reserves the dedicated number or
shared project until its endpoint is archived.
- Add Cloud project inspection, vaulted project credentials,
selected-line token renewal, and a leased receiver. Persist checkpoint
updates under the receiver lease. Shared project replay accepts sparse
increasing sequences only after a complete recovery barrier.
- Connect DMs and enabled groups to existing task generations, sender
authorization, ordered delivery, and publication services. Keep each
iMessage conversation on its task after completion; only explicit `/new`
or `/close` releases the binding. Publish committed inbound comments
live and label their human bubbles “Sent from iMessage” in both
task-chat renderers.
- Persist immutable text/file send identities, upload receipts, poll
IDs, option IDs, per-person drafts, and canonical interaction
continuation proofs.
- Add source-bound file recovery, bounded HEIC/HEIF conversion, JPEG
previews, and related Live Photo companion video retention.
- Add the three-step setup flow and channel management surfaces with
official branding. Preserve the experimental gate and existing
pause/disconnect behavior.
- Add interactive production-component Storybooks for setup, access,
recovery, and ongoing conversations. Add provider, integration, catalog,
and browser regression coverage. Document setup, recovery, supported
boundaries, and qualification gaps.

## Verification

- Live Photon Pro, SDK 2.1.0: linked iPhone messages create a task and
receive native Codex replies in Apple Messages. Unlinked senders cannot
start work.
- Three real follow-ups each reopened the same completed task. Incoming
bubbles appeared on its open page without reload and showed “Sent from
iMessage.” The third follow-up ran after restarting the server on
`4d7222110`; the agent correctly repeated its previous reply from before
the restart.
- Native polls after restart, sequential text drafts, required-field
correction, explicit submission, approval rejection with a required
reason, and native continuation passed against Photon.
- PNG, text documents, synthetic HEIC, and a real iPhone camera HEIC
passed in both directions. The camera photo produced a 3024×4032 JPEG
preview. The native agent described it and returned the received HEIC
byte-for-byte.
- Pause/resume, reconnect, identity revocation, removal, `/status`,
`/new`, `/close`, and stale answers after close passed live. Messages
suppressed by pause did not become work on resume. Removal stopped
intake and removed credential bindings.
- All 304 focused tests passed on `4d7222110`. These cover Photon
unit/integration behavior, both task-chat renderers, live comment
hydration, completed-task continuity after restart, enabled groups,
duplicate delivery, and explicit reset/close. The selected Teams
completion-boundary regression also passed. Full workspace
typecheck/build and token gates passed for the conversation fix; the
final UI changes passed their affected typecheck/build and tests.
- All 26 new Photon Storybook Playwright cases passed in light and dark
themes, including the complete shared-DM setup journey and 390px mobile
follow-ups. UI typecheck and the Storybook build passed. These stories
use simulated Photon responses and do not replace the live evidence
above.
- The full chat-adapters browser suite previously passed all 39 cases.
Migration checks passed, and migration 0275 applied to the isolated live
instance with the earlier Photon migration already applied.
- The local full Vitest run was previously interrupted by the host's
embedded-Postgres shared-memory limit; it is not a full-suite pass. All
30 applicable CI checks passed on preceding head `7a5419cac`, with two
skipped checks and Greptile 5/5. Head `24f8e1aae` adds an explicit
required-story discovery guard to the 26 passing Storybook cases.
Greptile rates this final head 5/5 with no unresolved review threads.
All 30 applicable CI checks passed, with two optional checks skipped.
- A repeated live send key suppressed the duplicate but returned gRPC 6
/ SDK `internalError` without an original receipt. Paperclip keeps
unknown delivery unresolved. This provider behavior is covered by a
regression test.
- See [the verification
record](doc/connections/IMESSAGE-PHOTON-VERIFICATION.md) for package
versions, redacted live evidence, deterministic coverage, and remaining
qualification gaps.

## Risks

- Dedicated group qualification remains unrun; groups are disabled for
the approved Pro scope. Real iPhone camera HEIC passed transport,
preview generation, agent inspection, and return. Keep the channel
experimental; the dedicated-line release matrix remains incomplete.
- Shared recovery and attachment aliases were verified against the live
gateway. Duplicate writes currently return an error without the original
receipt; unresolved sends require operator resolution. The
implementation fails visibly on invalid replay ordering, a reset cursor,
or changed identity.
- The HEIF converter passed on macOS arm64 and in Linux CI. Windows HEIF
binaries have not been executed in this work. Linux musl has no packaged
converter. Unsupported conversion retains the original and reports the
missing preview.
- The migration adds a global reservation across companies for Photon
numbers and shared projects. Paused and revoked endpoints keep that
reservation until removal.
- Integration touches shared channel services. Existing provider browser
coverage passes; broad repository verification is recorded above.
- `pnpm-lock.yaml` is intentionally excluded under repository policy.
The repository bot owns lockfile updates. The additional Superagent
supply-chain scan is neutral/inconclusive because these new dependencies
are not yet in the committed lockfile. Its security scan passed; all
required CI checks pass.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, repository inspection, code
execution, browser testing, and tool use. The exact served model
identifier and context-window size are not exposed in this session. No
sub-agents were used.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-12 15:23:50 -05:00
Devin FoleyandPaperclip 7435b2ee9c ci: cache compiled Docker Rust dependencies separately from source (#13329)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Paperclip Cloud deploys images that contain the native Rust Runner.
> - The image already builds that Runner before copying ordinary app
source.
> - A Rust source change still invalidates its entire compiled
dependency layer.
> - Compiled dependencies can survive source changes when their recipe
is unchanged.
> - This PR adds a separate locked dependency build before compiling the
real workspace.

## Linked Issues or Issue Description

Refs #13195. A search of related Docker and Cargo cache PRs found no
duplicate dependency-recipe change.

**What existing behavior does this improve?**

Docker image build time after Rust source or embedded protocol changes.

**Current behavior**

The `runner-build` stage compiles dependencies and workspace code in one
layer. In Cloud readiness run 34698143548, that stage took about 3m48s
when its cache was unavailable.

**Proposed behavior**

Generate a recipe with pinned cargo-chef 0.1.73. Build locked release
dependencies in `runner-deps`, then copy and compile real Rust source
and embedded protocol inputs in `runner-build`. Source edits can reuse
the dependency layer from the existing registry cache.

**Reason and benefit**

Reduce dependency recompilation during source changes and merge bursts.
Expected savings are roughly 2–4 minutes when the old native layer would
miss but dependency layers are available. Full cold builds also pay for
the recipe tool installation. Ordinary app-only cache hits gain little
from this change.

**Breaking changes**

None to the shipped application or image tags. The recipe tool and
compiled dependencies remain in build stages.

## What Changed

- Install a pinned recipe generator with its locked dependencies and the
existing package-owned compiler.
- Add recipe planning and compiled dependency stages. Use the same
release profile, package, binary, and lockfile enforcement as the real
native build.
- Remove generated source stubs before copying actual source. Preserve
protocol inputs, timestamp normalization, binary staging, and
application checks.
- Add Docker cache wiring regressions and update the Docker cache
documentation.
- Run a two-build probe in Docker Runner check. It requires dependency
reuse, changed real binary metadata after a source edit, and a changed
recipe after a dependency declaration edit. It uses a disposable
tracked-source context and exports only small metadata files.

## Verification

- Passed all five Docker build-stamp and dependency-cache tests with
`pnpm exec vitest run server/src/__tests__/docker-build-stamp.test.ts`.
- Passed the local ARM64 `docker buildx build --target runner-build
--progress plain`. Local Docker then hit storage errors during a runtime
probe; cache invalidation verification continues on GitHub-hosted Linux.
- Passed `bash -n scripts/check-docker-runner-cache.sh`, `actionlint`,
and `git diff --check`.
- Passed a [Linux AMD64 cache
probe](https://github.com/paperclipai/paperclip/actions/runs/34711042199)
against the PR source: dependencies compiled in 3m49s for the baseline
and were `CACHED` after a source edit; real source compilation took
about 37 seconds. Binary metadata changed and dependency declaration
changes altered the recipe. The permanent probe is also running in
latest-head Docker Runner check.
- Passed latest-head [Docker Runner
check](https://github.com/paperclipai/paperclip/actions/runs/34711145160),
including the permanent source/dependency invalidation probe.
- Passed full [PR
verification](https://github.com/paperclipai/paperclip/actions/runs/34711145352/attempts/2):
typecheck, all grouped tests, native verification, build, release dry
run, and browser checks. One unrelated signoff-policy browser test
failed waiting for a heartbeat run on attempt 1; only that failed shard
and dependent checks were retried, and passed.
- Latest-head Greptile is 5/5 with no unresolved findings. Full local
tests/build were limited by local disk exhaustion; Linux CI completed
those checks.

## Risks

- The two-build CI probe has a 20-minute job limit to cover the cold
build and source rebuild. It adds no AWS routing.
- A fully cold build must install cargo-chef and populate the dependency
layer. Both become reusable registry layers; no Actions cache is added.
- The recipe and final build must keep the same compiler, build profile,
package, binary, and directory layout. A source-change rebuild probe
checks real cache reuse and binary invalidation.
- Dependency or compiler changes still require rebuilding dependencies.
Existing image verification and full-SHA publication gates remain
unchanged.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, repository tools, and code
execution. The exact serving model ID and context window are not exposed
by this environment.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-12 11:57:32 -07:00
DottaandPaperclip ed50a39c3f fix: preserve NUL characters in run-event payloads (#13325)
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-12 13:34:45 -05:00
Devin Foley a59f5a8adc fix(server): stop reporting expected managed-cloud transients to Sentry (#13323)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - The server reports crashes to Sentry so operators can find real
faults
> - Three expected conditions report as crashes: a client that closes
the connection mid-request, one stale pooled database socket after a
pooled endpoint recycles, and the short boot window where a supervised
cloud stack runs a new app image before its migration runner has caught
up
> - These events arrive in the hundreds and bury real errors
> - This pull request classifies each condition as expected and stops
the Sentry capture for exactly that condition, with behavior unchanged
everywhere else
> - The benefit is a Sentry feed where each event is a real fault

## Linked Issues or Issue Description

**What happened?**

Three noise classes fill the backend Sentry project on managed cloud
fleets:

1. `Error: aborted` (ECONNRESET) reports as a 500 crash when a client
closes the tab or loses its network mid-request. Observed 18 times in
one week from routine client disconnects.
2. `Error: write CONNECTION_CLOSED ...` reports from many query paths
after a pooled Postgres endpoint suspends. The existing single retry in
cloud actor resolution still fails, because a suspended endpoint kills
every pooled socket at once and the one replay draws another dead
socket.
3. `Error: PostgreSQL has pending migrations (...). Refusing to start`
reports from every supervised stack during a fleet upgrade. The
supervisor delivers the new app image before it runs the migration
runner, so each stack crash-loops briefly by design. One fleet roll
produced 329 events (11 per container).

**Expected behavior**

A client disconnect ends the request quietly. A transient dead socket is
replayed until a live socket answers. A supervised mid-upgrade boot
refusal logs and exits nonzero without a Sentry capture, while the same
refusal on a self-hosted deployment keeps reporting.

**Steps to reproduce**

1. Abort an HTTP request mid-flight: the error handler reports a crash
to Sentry.
2. Suspend a pooled Postgres endpoint under an idle server, then issue
two quick requests: the first replay can draw a second dead socket and
surface `CONNECTION_CLOSED`.
3. On a deployment with `PAPERCLIP_CLOUD_API_ORIGIN` set, add a
migration file without running the migration runner and boot: the
refusal reports to Sentry.

**Paperclip version or commit**

master (0e14c61da)

## What Changed

- `server/src/middleware/error-handler.ts`: a request abort (`Error:
aborted` with `ECONNRESET`) ends the response with status 499 and skips
crash reporting and telemetry.
- `server/src/middleware/auth.ts`: `retryOnTransientDbConnectionError`
replays up to twice with a short pause, so a pool-wide recycle does not
defeat the retry.
- `server/src/startup-refusals.ts`: pending migrations on a database
with applied history classify as a supervised-transient refusal
(`schema-migration-pending`). The capture skip applies only when
`PAPERCLIP_CLOUD_API_ORIGIN` is set. A wiped journal beside real tables
keeps reporting. Self-hosted behavior is unchanged.
- Tests updated and added for all three behaviors.

## Verification

- `pnpm vitest run src/__tests__/startup-refusals.test.ts
src/__tests__/cloud-tenant-transient-db-retry.test.ts
src/__tests__/error-handler.test.ts` in `server/` — 25 tests, all pass.
- The abort test asserts no `captureException` and no telemetry crash
track.
- The refusal tests pin all three classifications: never-migrated,
pending-with-history, wiped journal.

## Risks

- Low risk. The abort path only triggers on the exact `aborted` +
`ECONNRESET` pair; every other error keeps reporting.
- The refusal reclassification suppresses a capture only under a cloud
supervisor. If an operator breaks a migration runner, the supervisor's
own deploy gates surface it; self-hosted deployments still report.
- The retry widening adds at most ~150 ms before a genuine connection
fault surfaces.

## Model Used

Claude (Anthropic) — claude-fable-5 (Claude Fable 5), Claude Code
harness, extended thinking with tool use.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge
2026-09-12 11:15:43 -07:00
DottaandPaperclip 24007a9804 fix: promote review tasks when continuations start (#13318)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The heartbeat service starts and tracks agent work on issues.
> - An issue can be in review before a user comment starts more agent
work.
> - The previous checkout rule did not claim an issue from review for
this continuation.
> - The issue could stay in review while an agent actively worked on it.
> - This pull request lets a resolved interaction continuation claim an
issue from review.
> - The existing checkout update then sets the issue to in progress.
> - The benefit is that issue status now shows active agent work
correctly.

## Linked Issues or Issue Description

**What happened?**

An issue stayed in review when a new agent continuation started work on
it.

**Expected behavior**

The issue must move to in progress when an agent starts work. An idle
issue must stay in review.

**Steps to reproduce**

1. Put an assigned issue in review.
2. Resolve an interaction that starts a continuation.
3. Start the heartbeat run.
4. Observe that the issue remains in review while the run works.

**Paperclip version or commit**

The problem reproduces on the master branch before this change.

## What Changed

- Allow a resolved interaction continuation to claim an assigned issue
from review.
- Keep idle review issues unchanged.
- Add regression tests for both behaviors.

## Verification

- Run `node_modules/.bin/vitest run
server/src/__tests__/heartbeat-auto-checkout.test.ts`.
- Confirm that all four tests pass.

## Risks

- Low risk. The change only expands checkout eligibility for resolved
interaction continuations.
- The existing guarded checkout update still controls ownership and the
status update.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex with GPT-5.5. The model used reasoning, tool use, and
code execution.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-12 13:11:10 -05:00
DottaandPaperclip c9021c6721 fix: require explicit native completion reviews (#13314)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Native runs report their outcome through paperclip_finish.
> - The server previously turned incomplete reports into human approval
requests.
> - Those requests could block a later successful run, even when no
person had requested review.
> - This pull request creates review cards only for explicit attention
requests and withdraws proven old fallback cards.
> - Agents receive useful completion feedback, while explicit approval
gates and task state protections remain in force.

## Linked Issues or Issue Description

Related: #13266 removed reviews caused by policy upgrades. This change
removes the separate completion fallback.

**What happened?**

An agent reported needs_review while waiting for checks without
requesting a human decision. Paperclip created a generic Native
completion review. A later successful report could not complete the task
because that old card remained pending.

**Expected behavior**

Ordinary low-risk work completes after a valid done report, a successful
run, and workspace finalization. Incomplete work stays with the agent.
Explicit approval requests remain visible and must be resolved.

**Steps to reproduce**

1. Complete a native run with needs_review and no attention requests.
2. Continue the task and submit a successful done report.
3. Observe that the old implementation leaves the task in review behind
a generic confirmation card.

## What Changed

- Require explicit attention requests to create native review cards.
Route each request independently and preserve pending or declined
decisions.
- Withdraw only pending system cards with matching old decision,
assessment, effect, contract, and prompt provenance. Preserve history
and explicit or answered requests.
- Reassess an affected current result without overwriting later task
edits, runs, contracts, or workspace failures.
- Return pending approval links and required actions through the
completion tool. Reject contradictory done reports and empty review
requests before accepting a result.
- Allow one corrective continuation for incomplete results, then expose
a recovery action.
- Update status fixtures, database regressions, runner tests, and the
completion contract documentation.

## Verification

- `pnpm -r typecheck` passed after merging current master.
- `pnpm build` passed after merging current master.
- The combined branch passed 89 completion and Agent Chat tests. Other
targeted tests passed: 170 external-chat and reconciliation tests; 50
runner-resume and control-plane tests; 13 arbiter tests; 7 chat delivery
tests; 21 runner completion and runtime-context tests.
- The full local test attempt exposed old review fixtures and a missing
fake-provider binary. The fixtures are fixed and the helper is built.
All affected suites pass in fresh reruns. The timing-sensitive Discord
test also passed on rerun.
- All latest-head CI checks passed, including build, typecheck, general
and serialized tests, runner verification, browser tests, and canary dry
run. Greptile is 5/5 with zero unresolved comments.

## Risks

- Cleanup changes existing pending cards. It requires exact system
provenance and only applies to low-risk agent-claim contracts. It does
not delete history or dismiss explicit requests.
- Status still commits after the turn and workspace finalization.
Completion feedback reports current constraints and does not claim an
early status commit.
- Incomplete reports now request a bounded corrective run instead of an
automatic approval. Repeated failures expose recovery.

## Model Used

OpenAI Codex, GPT-6, with repository inspection, code execution, and
test tools. The exact deployment identifier and context window size are
not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-12 13:00:04 -05:00
DottaandPaperclip 7e6d512597 fix(onboarding): make chief-of-staff hiring reliable (#13317)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The first agent helps the board define work and hire other agents.
> - That agent can have the general role while its instructions require
hiring skills.
> - Missing skills and blocked schema discovery make valid requests
fail.
> - Repeated confirmation and invalid waiting guidance can turn these
failures into extra runs.
> - This PR supplies the required skills, opens read-only schema
discovery, and corrects the guidance.
> - The agent can complete an authorized hire while company approval and
duplicate checks still apply.

## Linked Issues or Issue Description

Refs #13068 — the first-task onboarding flow that this change repairs.
Refs #12029 — related drift between the sandbox allowlist and bundled
hiring guidance. This PR adds schema access; it does not replace the
earlier hiring-route fix.

**What happened?**

A general-role onboarding chief received hiring instructions without the
core hiring skills. Sandbox requests to the documented OpenAPI endpoint
failed. The agent then guessed question and hire payloads. The persona
required new confirmation after validation errors and described waiting
states that agents cannot set.

**Expected behavior**

A direct request authorizes the requested hire. The chief asks only for
material missing details, uses valid API payloads, and completes the
task. Formal company approval gates still apply. A saved human-input
card gives the task a valid waiting state.

**Steps to reproduce**

1. Create an onboarding chief with role `general` through the board.
2. Ask it to hire a friendly robot with a supplied name and
responsibilities.
3. Check its assigned skills, schema requests, question cards, hire
requests, and final task state.

**Paperclip version or commit**

Reproduced on the first-task onboarding implementation after #13068. The
live local verification used this branch at `112f44610`.

**Deployment mode**

The original failure used a hosted sandbox with legacy Codex ACP. Live
verification used an isolated local instance and real `codex_local`
execution. Queue and HTTP/2 transport access is covered by automated
tests.

## What Changed

- Give board-created onboarding chiefs the existing core skills
regardless of role. Preserve explicit skill version pins, including
aliases. Keep ordinary general-agent defaults and authorization checks.
- Allow exactly `GET /api/openapi.json` through both sandbox bridge
transports.
- Publish validator-tested question, free-text, hire, and waiting
examples. Regenerate the runner API reference and capability inventory.
- Clarify direct authorization, material ambiguity, and correction of
confirmed pre-creation validation failures. Preserve uncertain-outcome
reconciliation, duplicate protection, and company approval gates.
- Align disposition instructions with agent permissions and the saved
human-input waiting path.

## Verification

- After rebasing onto current `master`: 69 targeted server tests, 110
queue/HTTP2 bridge tests, and 4 capability inventory tests passed. These
cover core skill defaults, version pins, actor restrictions, schema
access, published examples, hire validation, idempotency, and approval
gates. Waiting recovery tests and live question flows also passed before
the rebase.
- `pnpm -r typecheck` and `pnpm build` passed again after the rebase.
Frozen dependency installation and both generated capability checks
passed.
- Ran the full `pnpm test:run` suite. The initial run had 14 failed
server files due to local database resource limits, a missing built test
fixture, and socket failures. All 14 files passed after fixture repair
and isolated retries. UI, CLI, workspace packages, database tests, and
all 145 serialized server files passed.
- Real one-request hiring replay: one hire, one successful run, task
done in 2m16s. No repeated approval or recovery escalation.
- Real two-turn browser conversation: start with an unspecified hire,
then supply a name and friendly robot responsibilities. One
clarification card, one hire, two successful runs, task done in 3m27s of
execution. No failed writes, confirmation cards, or recovery actions.
- Assigned the hired robot a welcome-message task through the browser.
It produced a warm message under 100 words and finished in one
successful 66-second run, with no questions or recovery actions.
- The two-turn flow still asked an optional preferences question and
gave a technical final reply. These are remaining presentation limits.
- Greptile: 5/5 on `b71f83ba2`, with zero unresolved review threads.
Fixed its generator finding and passed 1,655 published-example/runtime
API tests plus server typecheck. All latest-head CI checks are green (32
passed; 2 unrelated Storybook checks skipped). The signoff-policy
browser test initially timed out while waiting for an approver run. Its
shard passed on one rerun without code changes. [CI
run](https://github.com/paperclipai/paperclip/actions/runs/34698211049).

## Risks

- Onboarding chiefs receive more default skills. Ordinary general agents
retain existing defaults, and explicit versions take precedence.
- Prompt guidance can affect model behavior. The live replays are
examples, not a guarantee that every model follows the guidance.
- Retry guidance applies only when validation confirms that nothing was
created. Uncertain outcomes still require checking existing agents.
- No database migration or new public endpoint. Existing company
boundaries, approval gates, and bounded recovery remain in force.

## Model Used

OpenAI Codex, model `gpt-6-astra`, with reasoning, tool use, code
editing, and live browser verification. The exact context-window size is
not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-12 12:59:42 -05:00
DottaandPaperclip 0e14c61da7 fix: fence native startup against cancellation (#13316)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Users can pause a task while its runner prepares to start.
> - Cancellation must prevent preparation from creating new execution
authority.
> - Native runtime selection could run after cancellation and leave an
unclaimed recovery coordinator.
> - Saved user messages then waited for recovery that had no eligible
worker.
> - This pull request fences startup and lets explicit user continuation
settle verified, unclaimed startup state.
> - Tasks can continue after cleanup while keeping provider ownership
and execution safeguards.

## Linked Issues or Issue Description

Refs #13285 for startup controller leases and #13270 for explicit
continuation and saved-message recovery. Related #13293 covers retained
processes that actually started; this change covers cancellation before
the native provider claim. Related #13315 covers legacy queued-message
delivery.

**What happened?**

Pausing a task during startup could cancel its heartbeat before native
runtime selection. Stale preparation then created an observed native
coordinator on the cancelled run. The coordinator had no provider result
or eligible recovery worker. A later Continue message stayed queued
indefinitely.

**Expected behavior**

Cancellation fences native startup. After verified cleanup, a newer user
message starts one fresh conversation turn. An unverified execution
keeps its hold and a clear explanation.

**Steps to reproduce**

1. Start a task with the native runner and delay startup preparation
before runtime selection.
2. Pause the task, then release preparation.
3. Resume the task and send Continue.
4. Before this fix, native selection can persist after cancellation and
block the saved message.
5. Repeat from persisted cancelled startup state after a server restart.

**Paperclip version or commit**

Reproduced against master at `586b5ec82` with isolated PostgreSQL
regression fixtures.

**Deployment mode**

Self-hosted server built from source, with Paperclip Runner.

## What Changed

- Serialize the cancellation fence and native runtime selection on the
run row. Revalidate the startup controller lease.
- Refresh the runtime before dispatching cancellation, and reject
terminal or cancelled runs at the native provider claim.
- Recognize never-claimed coordinators only after startup and
environment cleanup are verified. Reject process, provider, owner, and
conflicting launch evidence.
- Settle that coordinator atomically with a new authenticated user turn.
Preserve history, unknown outcomes, and attempt counts.
- Reuse the saved-message worker after restart and retain pause, budget,
approval, and ownership gates.
- Add startup, restart, duplicate-admission, and negative-proof
regressions. Document the rule.

## Verification

- All 687 tests pass across the complete heartbeat recovery, explicit
continuation, and native session executor suites on the rebased branch.
- Six focused race regressions also pass: cancellation before and after
native selection, Stop racing adapter registration, process termination
during a database failure, and a run finishing during cancellation.
- `pnpm -r typecheck` and `pnpm build` pass after rebasing on master at
`ab15aff39`.
- Greptile is 5/5 on `f3dea2ab27facdf0360b56172ebd3e5219e25538`, with no
open review threads. Policy and security checks pass.
- All 32 CI checks pass on the final head, including the full
server/workspace test matrix, all three browser shards, runner
verification, typechecks, build, and canary dry run. The two optional
Storybook jobs are skipped. [CI
run](https://github.com/paperclipai/paperclip/actions/runs/34697945514).
- Local full-suite limitation: the broad `pnpm test:run` attempt
reported two failures outside the changed area after unusually long test
durations (about 65 seconds for supporting skill-file saves and 933
seconds for setup-token login). Both cases passed isolated reruns, with
no code changes. The broad local run was stopped after CI completed
successfully; no clean full local-suite pass is claimed.

## Risks

Cancellation and startup overlap. The run and coordinator locks provide
the authority fence; cleanup and process evidence provide the
containment proof. Historical runs without sufficient evidence remain
blocked. A saved user message authorizes a fresh turn, not automatic
replay. No schema migration or dependency change.

## Model Used

OpenAI GPT-6 through Codex, using reasoning, repository inspection, code
execution, and tests. This session does not expose the exact backend
revision or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-12 11:39:36 -05:00
DottaandPaperclip ab15aff390 feat: add experimental persistent agent chat (#13284)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Conversations must use the same tasks, controls, and execution
history.
> - Users need an ongoing chat with an agent without managing task
properties.
> - Agents should clarify and plan work, then hand execution to assigned
project tasks.
> - This pull request combines the reviewed Agent Chat stack for one
squash merge.
> - The benefit is persistent conversation with normal task governance
and shared UI.

## Linked Issues or Issue Description

**Subsystem affected**

Task lifecycle, agent runtime tools, shared task UI, and browser/paid
runner tests.

**Problem or motivation**

Users need one persistent conversation with each agent. A separate chat
store or renderer would duplicate task behavior and bypass existing
controls.

**Proposed solution**

Use a task-backed chat per company, user, and agent. Reuse the task
composer and transcript. Clarify and plan in chat, then create assigned
project tasks with the relevant plan. Keep Agent Chat behind its own
disabled-by-default experimental setting.

**Roadmap alignment**

This implements the task-backed direction in [CEO
Chat](https://github.com/paperclipai/paperclip/blob/master/ROADMAP.md#-ceo-chat).
Related proposals: #2504 and #9693. Related request: #7981. The
maintainer requested one squash merge of the complete stack.

Consolidates the reviewed runtime
[#13281](https://github.com/paperclipai/paperclip/pull/13281), backend
[#13282](https://github.com/paperclipai/paperclip/pull/13282), and UI
[#13283](https://github.com/paperclipai/paperclip/pull/13283) layers
with this PR's E2E coverage. All four layers passed CI and received
Greptile 5/5 before consolidation. This PR targets master and includes
the complete feature.

## What Changed

- Add personal canonical chat tasks with ordinary company visibility,
immutable identity, idempotent first sends, and an idle waiting state.
- Process `/new` in queue order. Preserve history, release a chat pause,
and fence old provider context and delayed writes.
- Keep chat lifecycle rules across recovery, finalization, assignment,
task lists, and rollups.
- Support research and plan revision in chat. Hand plans to ordinary
assigned project tasks before execution starts. Reject new chat
subtasks.
- Add repository-aware project creation and discovery tools, including
multiple repository IDs and GitHub URLs, authorization, idempotency, and
durable project-created cards.
- Reuse task UI components for chat, with starred/recent agent
navigation and a separate `enableAgentChat` experimental flag.
- Add deterministic browser tests and 24 paid chat cells across four
Codex/Claude profiles, with validated reports and screenshots.
- Integrate current master recovery, controller lease, queued-message,
and task UI changes. Gate chat interruption and deferred promotion on
ownership/feature policy. Guarantee lease renewal and active controls
are stopped even if teardown fails.
- Preserve master's migration 0273 and generate chat migration 0274 with
idempotent replay for development databases.

## Verification

- Prior exact heads of all four PRs passed Linux CI, including build,
typecheck, general/serialized tests, and browser E2E. Each had Greptile
5/5 and no unresolved findings.
- Integrated local verification passed: full repository typecheck and
production build, Storybook build, token gates, 340 focused UI tests,
all 20 deterministic chat browser tests, two migration replay tests, 88
focused chat/queue/native/controller tests, and provider/session
regressions including real lease expiry. These include the three
lifecycle regressions for the final admission/teardown fixes; server
typecheck also passes. Current head
`1268eda16cc2af892055917e7292f068820be135` has Greptile 5/5 with no
unresolved findings and passing security scans. All final-head CI gates
passed: build, full Runner verification, typecheck/release registry,
canary, all general/serialized test shards, and all browser E2E shards
([CI
run](https://github.com/paperclipai/paperclip/actions/runs/34696739927)).
Local PostgreSQL startup contention required serialized retries; skipped
fixtures do not count as passing coverage.
- The earlier paid campaign passed all 24 chat cells and retained 32
screenshots:
[report](https://d1p6rlowie26tp.cloudfront.net/runner-e2e/campaigns/gha-34648511170-1/index.html?report=agent-chat#suite-agent-chat).
It tested `abacbdfd2f660709ec37312cdb758284c8399d04`; it is prior
evidence, not a paid run of this integrated head.
- Manual check: enable Agent Chat in Experimental settings, open an
agent, clarify and revise a plan, then hand off to an assigned project
task. Stop a reply, send `/new`, and verify fresh context with retained
history. Disable the setting and verify agent shortcuts/new chat turns
are blocked.

## Risks

- Queue/session integration can affect retries and delayed writes. Tests
cover ownership, cancellation, reset boundaries, idle recovery, and
ordinary task behavior.
- Migration 0274 adds conversation fields and constraints. Replay is
idempotent and preserves existing development chat history.
- This combines the previously reviewed stack at the maintainer's
request. Agent Chat remains off by default and is separate from
Conference Room.

## Model Used

OpenAI Codex, GPT-6 Astra (`gpt-6-astra`), with reasoning, code
execution, browser tools, and parallel review. The exact context-window
size is not exposed in this session. Codex and Claude also ran as test
subjects in the linked paid campaign.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-12 08:56:04 -05:00
DottaandPaperclip 8f40b4ad4b fix(connections): repair and simplify Google Workspace setup (#13289)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - App connections give agents controlled access to external services.
> - Managed Google Workspace methods depend on profiles enabled for each
Paperclip instance.
> - The catalog used those profiles, but connection creation used static
availability and rejected enabled connections.
> - Switching capabilities also reset personal ownership to company-wide
ownership.
> - This PR uses the same availability rules for catalog and setup, and
preserves supported ownership choices.
> - Paperclip is the default Google authentication method. A small link
opens custom OAuth settings when needed.
> - Local and cloud instances can start the selected Workspace
connection without broadening its audience.

## Linked Issues or Issue Description

**What happened?**

A fresh enrolled instance showed managed Google Workspace apps as
available. The issue was first found with Gmail. Selecting Continue to
sign in returned HTTP 422 with “This app does not have an available
connection method.” Changing from Read & create drafts to Read only also
reset Just me to company-wide ownership.

**Expected behavior**

Start Google authorization for an enabled profile. Keep personal
ownership when the selected method supports it. Reject profiles that the
instance cannot use.

**Steps to reproduce**

1. Start a fresh source test-drive and enroll the instance with
Paperclip Cloud.
2. Open Apps and select Gmail.
3. Select Just me and choose the agents that can use the connection.
4. Continue to setup and select Read only.
5. Go back to inspect ownership, then continue to sign in.

**Paperclip version or commit**

Reproduced on master commit 250deab910.
The fix is rebased onto current master.

**Deployment mode**

Local source test-drive. Regression tests also cover authenticated cloud
mode, HTTPS callbacks, and instance credentials supplied through
environment variables.

Related PRs: #13098 preserves task context through enrollment and OAuth.
#12619 introduced the managed Google Workspace rollout. This PR fixes
availability validation and ownership changes in that setup flow.

## What Changed

- Share instance-specific managed-method filtering between catalog
discovery and connection creation.
- Keep stored managed methods recognizable during callback, refresh, and
revoke.
- Preserve credential ownership when switching to another method that
supports it.
- Replace the Google authentication radio cards with a small Use your
own Google OAuth app link. Reveal custom fields only when selected, with
a Use Paperclip instead link to return. Associate the toggle with its
labeled field region for screen readers.
- Test all 16 managed Google Workspace profiles in local and
authenticated cloud modes, including cloud environment credentials and
unavailable profiles.
- Test ownership across all nine Workspace app cards, including
capability changes, authentication changes, and enrollment return.
- Document the shared availability and ownership behavior.

## Verification

- All 135 setup tests pass after the UI change. The focused connector
and service suites also passed before this presentation-only change.
- The expanded Workspace matrix includes 32 local/cloud callback cases,
16 cloud environment-identity cases, 32 unavailable-profile cases, and
18 UI ownership cases.
- `pnpm -r typecheck`, `pnpm build`, and `pnpm check:token-gates` pass.
UI typecheck and token gates also pass on final commit `2071002d6`.
- Browser tests cover Gmail, Calendar, Chat, Docs, Drive, People,
Sheets, Slides, and Workspace Search in an isolated source test-drive.
- Each app reaches Google sign-in with its expected read-only scopes.
Personal ownership persists after capability or authentication changes.
Chat also resumes its saved setup with read-only access intact.
- Browser verification of the new layout: custom fields start hidden,
the small link reveals them, and keyboard activation of Use Paperclip
instead hides them. Personal ownership and read-only selection persist.
- Google consent was not granted. Live provider reads and a deployed
cloud instance remain unverified.
- The local repository-wide suite was stopped at the maintainer's
request. Full CI verification passed for final commit `2071002d6`: 31
successful checks, two optional Storybook checks skipped. This includes
repository tests, browser E2E, typecheck, build, and canary dry run.
Greptile reviewed that commit at 5/5 with no outstanding findings.

## Risks

- The shared availability helper affects all managed connectors. It
filters methods by the instance's advertised profiles and does not
mutate the static catalog.
- Stored connections can resolve their managed method after availability
changes. The broker still enforces current access during authorization
and refresh.
- No database migration or provider scope change is included.

## Model Used

OpenAI Codex (GPT-6), with reasoning, code editing, shell tools, and
browser automation. The session does not expose an exact runtime model
ID or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-12 07:57:48 -05:00
Nicky LeachandPaperclip dbf5ea432d fix: protect starting runs during overlapping deployments (#13285)
## Thinking Path

> - Paperclip controls agent work across service deployments.
> - A run can provision a remote sandbox before a process or invocation
event exists.
> - Each container previously treated its own missing process handle as
proof that the run was orphaned.
> - Overlapping deployments could therefore fail a run owned by another
container.
> - This pull request records and renews a controller lease before
provisioning.
> - A recovery worker must revoke an expired owner before it finalizes
the run.

## Linked Issues or Issue Description

Merged PR #13272 records startup adapter identity and restores explicit
user continuation. This PR adds controller ownership on top of current
master. Refs #7997 and #10442 for related replica and ownership
problems. Related #13138 addresses silence and detached local processes;
this change does not infer death from silence.

**What happened?**
During an overlapping hosted service deployment, a new container reaped
a legacy conversation run that another container was provisioning. The
run had no PID or adapter invocation yet.

**Expected behavior**
A live controller keeps its run. After controller loss, one recovery
worker takes cleanup authority and the old controller cannot dispatch
further work.

**Steps to reproduce**
Claim a legacy run in controller A. Start controller B against the same
database before A finishes provisioning. Run the startup reaper in B.

**Paperclip version or commit**
Observed on `663c44cb2b9c28336d38d0b4a6971f4f1964bce6` in a hosted
Railway deployment with a Daytona environment.

## What Changed

- Add nullable controller boot ID, lease deadline, and execution stage
columns. Claim ownership in the queued-to-running update.
- Renew ownership independently of run output. Abort and reject dispatch
if renewal fails.
- Serialize reaper revocation against renewal. Let unfinished recovery
claims expire after a restart.
- Restrict graceful shutdown to legacy runs owned by the current
controller.
- Hand ownership back to the existing native coordinator when runtime
selection becomes native.
- Add twelve database regressions and document the lease contract.
Update the task-drain regression to require controller expiry before
reaping.

## Verification

- `pnpm exec vitest run
server/src/services/legacy-controller-lease.test.ts
server/src/__tests__/heartbeat-task-drain-admission-release.test.ts`: 14
passed after rebasing onto master (`f12b647ae`).
- Queue-interruption regressions in
`heartbeat-process-recovery.test.ts`: 2 passed after preserving the new
cleanup promotion from #13275.
- `pnpm --filter @paperclipai/server exec tsc --noEmit`: passed after
rebuilding runner TypeScript outputs for the updated master. Broad local
tests are omitted at the maintainer’s request; CI owns broad coverage.

- Latest-head CI passed on `f255e8e4d5ab2b24b12638a02434e6aa8a2285c5`:
[run
34658248569](https://github.com/paperclipai/paperclip/actions/runs/34658248569).
All test shards, browser suites, typecheck, build, canary, and security
checks passed. Greptile is 5/5 with no unresolved review threads.

## Risks

- Additive, idempotent migration; historical rows retain the previous
recovery behavior.
- Database unavailability aborts new dispatch rather than permitting an
unfenced controller to continue.
- Lease expiry is permission to clean up, not evidence that remote
inference stopped. Follow-up PRs add persistent cleanup and automatic
continuation.
- Mixed-version deployment still includes old binaries whose reapers do
not understand controller leases.

## Model Used

OpenAI GPT-6 through Codex, using reasoning, repository inspection, code
execution, and test tools. The precise backend revision and
context-window size are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-11 16:55:44 -07:00
DottaandPaperclip f12b647ae8 fix: reliably interrupt and resume legacy message queues (#13275)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - A task can collect more messages while its agent works.
> - Legacy runners must stop the active process before they can receive
those messages.
> - The old Interrupt action cancelled the run but could leave the queue
idle and hidden.
> - Codex could also classify a cancelled run as successful or start a
fresh process after cancellation.
> - This pull request joins cancellation, preserves the provider
session, and dispatches the current queue after cleanup.
> - The benefit is reliable interruption with the saved message order,
edits, and deletions.

## Linked Issues or Issue Description

**What happened?**

Interrupt could strand a legacy message queue. The UI could hide pending
messages after the run stopped. A Codex signal exit could race the
cancellation write. A stale session warning could also trigger a fresh
process after an interrupted resume.

**Expected behavior**

Interrupt stops the active turn and sends the remaining messages once,
in their saved order. Deleted messages stay deleted. An interrupted
Codex turn keeps its session and does not restart itself.

**Steps to reproduce**

1. Assign a task to a legacy Codex agent that runs a long command.
2. Queue three messages. Edit one, discard another, and move the last
message first.
3. Click Interrupt in the queue.
4. Repeat the interruption while the resumed session runs another
command.

Related work: Refs #13160, which moves native queue steering into the
wake-queue module. This change fixes legacy interruption and keeps
native steering unchanged.

## What Changed

- Add a revision-checked, company-scoped endpoint for legacy queue
interruption.
- Promote only the requested queue after the provider stops and releases
its lease. Retry its persisted interrupt intent from the scheduler after
a promotion error or server restart.
- Keep pending legacy queues visible after a run stops. Use server state
for the interrupt result.
- Serialize owned process cancellation before classifying the adapter
result. Preserve late session and log metadata. Acknowledge cancellation
only when an actual process or process group was owned; scheduler
placeholders retain their normal release policy.
- Send Ctrl-C to legacy Codex. Prevent missing-session fallback once the
session has started.
- Add cancellation race, multi-actor queue order, durable retry, resume
fallback, and stale request regression tests. Document the behavior.

## Verification

- Real browser tests passed with legacy Codex CLI and ACP engines, using
Codex 0.153.4 and gpt-5.6-sol.
- All three automated ACP browser scenarios passed locally: immediate
Interrupt delivery, no replay of an unfinished write, and pause
requiring Resume. Updated the old test expectation that required a
separate “go” after Interrupt.
- Browser tests covered queued edits, deletion, reordering, deleting the
final message, and repeated interruption.
- Two consecutive CLI interrupts kept one provider session. Both stopped
processes exited. The final message arrived once.
- `pnpm -r typecheck` passed.
- `pnpm check:token-gates` passed.
- All 346 post-review scheduling, recovery, queue-route,
archived-company, worktree-suppression, and stale-queue regression tests
passed.
- All 318 process-recovery and durable-chat tests passed after the final
cancellation guard.
- Codex adapter, queue UI, issue-page, and OpenAPI contract tests
passed.
- `pnpm build` passed.
- Full local suite coverage completed with
`PAPERCLIP_IN_WORKTREE=false`, using the stable runner and its CI
shards: 618 general server suites, all 145 serialized server suites, and
all workspace groups. Every failing suite passed a targeted rerun after
the fixes, rebuilding the native test fixture, correcting macOS
temporary-path setup, or retrying setup/timing failures. Existing skips
remain.
- The original monolithic run reported failures before the final fixes;
its failed suites were rerun rather than rerunning all 618 suites again.
The final process-recovery/durable-chat regression run passed all 318
tests.
- All CI checks passed for `e30eaf787f23a5511a3cb3cdb5abbccab9ed001d`:
[run 34654820774, attempt
2](https://github.com/paperclipai/paperclip/actions/runs/34654820774/attempts/2),
including typecheck, build, all test shards, E2E, and canary. The
signoff and Cursor sandbox tests each hit a timeout in the initial
attempt; both suites passed locally, and both failed shards passed their
single CI rerun. All three corrected ACP browser scenarios passed in CI.
- Greptile reviewed `e30eaf787f23a5511a3cb3cdb5abbccab9ed001d`: 5/5, no
open review threads.

## Risks

Cancellation order affects local adapters. The tests cover signal exits,
graceful exits, adapter exceptions, termination errors, and cancellation
write errors. Embedded adapters keep their cancellation controls.
Ordinary run cancellation and task pause keep their distinct queue
policies. No database migration is required.

## Model Used

OpenAI Codex, GPT-6, with reasoning, tool use, browser testing, and code
execution. The exact serving model ID and context-window size are not
exposed in this session. The live test runner used OpenAI gpt-5.6-sol.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-11 18:26:59 -05:00
DottaandPaperclip a38ccf9972 fix: retry transient continuation admission locks (#13290)
## Thinking Path

> - Paperclip manages AI agents and the tasks that they execute.
> - The run scheduler checks continuation authority before it starts a
provider.
> - This check uses database locks to order execution against
conversation closure.
> - A short lock conflict could fail a valid user follow-up before the
provider started.
> - This pull request retries the admission transaction after the locks
are released.
> - Valid work can start after normal contention, while closure and
cancellation still stop execution.

## Linked Issues or Issue Description

Refs #13038. Related continuation work: #13270 and #13239.

**What happened?**

A user comment started a run through the automation queue. Its source
records and admission marker were valid. A database lock conflict at
dispatch caused `chat_control_recovery_proof_unresolved` and stopped
automatic recovery. The provider received no work.

**Expected behavior**

Retry short database lock conflicts before failing admission. Read
current ownership and conversation-close evidence on each attempt. Do
not retry provider execution.

**Steps to reproduce**

1. Queue a user follow-up through the automation transport.
2. Hold the task row lock in a separate transaction at the dispatch
boundary.
3. Release the lock after 250 ms.
4. Before this fix, the run fails before provider dispatch. With this
fix, the run passes admission once the lock is released.

**Paperclip version or commit**

Reproduced on base commit `1c4bcff2b`. Disabling the new retry
reproduces the original error in the regression test.

**Deployment mode**

Self-hosted server with PostgreSQL. Regression tests use embedded
PostgreSQL.

## What Changed

- Retry rolled-back admission transactions after lock conflicts, with up
to 50 waits of 100 ms.
- Keep queue claims nonblocking. Keep provider dispatch outside the
retried transaction.
- Recheck current run state and committed close evidence after every
conflict.
- Explain persistent database contention in the exhausted admission
error.
- Add real database contention tests and bounded retry tests. Document
the behavior.

## Verification

- `pnpm exec vitest run
server/src/__tests__/heartbeat-process-recovery.test.ts
server/src/services/chat-control-admission-retry.test.ts`: 273 passed.
This includes task, wake, and run locks, the native runner, close/cancel
races, unrelated failures, and retry exhaustion.
- Regression proof: disabling retries makes the user-follow-up test fail
with `chat_control_recovery_proof_unresolved`.
- `pnpm -r typecheck`: passed.
- `pnpm build`: passed.
- `pnpm test:run`: stopped after all equivalent CI server/workspace
shards passed. The local run exposed a missing `fake-codex-app-server`
fixture binary in the fresh worktree; after `pnpm --filter
@paperclipai/paperclip-runner run build:rust`, the complete affected
`native-session-resume.test.ts` suite passes (37 tests).
- Greptile: 5/5, no findings, on commit `c974a496a`.
- CI: all 31 checks passed on commit `c974a496a`, including all
server/workspace test shards, browser tests, typecheck, runner
verification, build, and the release dry run. [CI
run](https://github.com/paperclipai/paperclip/actions/runs/34654770074).

## Risks

- A contended dispatch can wait through 50 short delays, plus
transaction time.
- Persistent contention still fails closed after the retry budget.
Invalid source evidence fails without retrying admission.
- No schema, permission, provider retry budget, or queue-claim behavior
changes.

## Model Used

OpenAI Codex, GPT-6. The exact deployed model ID and context-window size
are not exposed in this session. Used reasoning, repository inspection,
code editing, and command execution.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-11 18:11:44 -05:00
DottaandPaperclip 9031516a7e fix: recover legacy Daytona startup failures from task and inbox (#13272)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Legacy conversation adapters can run in Daytona sandboxes.
> - A server restart during provisioning can occur before the invocation
event exists.
> - Recovery then lacks the old adapter identity and leaves a hold that
ordinary user retries cannot clear.
> - A remote launch can also fail when its host relay looks for Node in
the sandbox PATH.
> - This pull request records the adapter at claim time and restores
explicit user continuation after verified cleanup.
> - Users can recover from the task or inbox while the failed run and
uncertain action history remain intact.

## Linked Issues or Issue Description

Refs #13237, #13239, #13254. Those changes cover recorded conversation
runs, native user continuation, and explicit remote Stop. This change
covers legacy failure before `adapter.invoke` and exact task/inbox
Retry.

Refs #9771 for overlapping generated-command quoting. This change also
supplies the absolute host Node executable. Refs #13163 and #13264 for
the separate native restart and retained-workspace work.

**What happened?**
A legacy Daytona run interrupted during provisioning became
`process_lost` without an invocation event. Recovery preserved an
execution hold, and Retry or a new task reply could not resume it.
Cleanup could also run before the Daytona plugin was ready. On a macOS
host, a subsequent ACP relay launch failed with `env: node: No such file
or directory` because the remote launch environment did not contain the
host Node path.

**Expected behavior**
An interrupted conversation can continue after its previous execution
stops. Explicit Retry and new user replies should start a fresh turn
with the task history. Cleanup failures must remain visible and
recoverable. The host relay must use the host Node executable.

**Steps to reproduce**
1. Use a legacy Claude adapter with a Daytona environment.
2. Interrupt the server after it acquires the sandbox lease and before
it records `adapter.invoke`.
3. Restart and inspect the task hold.
4. Retry from the task or inbox, or send a new task reply.
5. Confirm the old sandbox has stopped and one new response arrives.

**Paperclip version or commit**
Reproduced from master at `3bafac12f796fbea02e609e1074a9639f872e9c4`.
The branch is rebased on `51b0e01ea`, including #13261 and #13270.

**Deployment mode**
Built from source on macOS with a real Daytona sandbox and the legacy
Claude ACP adapter.

## What Changed

- Count new browser specs with the scheduler's median duration in the
shard-balance check. This fixes a false policy failure after new specs
arrive from both branches. The balance threshold is unchanged.

- Persist server-owned adapter identity in the queued-to-running claim
before provisioning starts.
- Wait for provider plugin startup before restart cleanup. Keep failed
cleanup leases as active ownership blockers.
- Admit exact board retries and new user comments after verified
termination. Retain the old run, task history, approvals, and unknown
action outcomes.
- Adopt repeated Retry requests. Permit one scoped cleanup attempt per
explicit user Retry after the automatic limit, with an activity record.
A later user Retry can recover after a transient provider failure;
automatic attempts remain capped.
- Resume replies deferred during cleanup, including historical legacy
startup failures.
- Launch the host ACP relay through the absolute host Node executable.
- Add a task-level Retry button and return actionable blockers when
retry admission is refused.
- Add database regressions and three browser recovery journeys. Exclude
installed third-party dependency skills from the shipped-skill audit.

## Verification

- Current head: `d23c84181`, rebased on `51b0e01ea`. Conflict resolution
retains the saved-message recovery, local stop receipts, and wait
reasons from #13270 alongside exact legacy Retry support.
- Real Daytona: interrupted the server after lease acquisition and
before adapter invocation. Restart cleanup confirmed provider
termination. Task Retry cleared a seeded historical hold and a real
Claude agent returned `Recovery verified.` in the task. Removed the
disposable sandbox and environment after testing.
- All three browser recovery journeys passed again after the final
rebase. Task Retry, Inbox Retry, and a new reply each produced one fresh
successor, completed the task, preserved the failed run, and retained
the answer after reload.
- All 29 e2e/server shard-partition tests passed. The balance check now
uses the scheduler's median fallback for unmeasured specs, with the same
balance threshold.
- Server typecheck passed after rebuilding the generated runner
dependencies. The combined recovery/route run passed 136 of 137 tests.
Its remaining route test timed out during the first cold module import
at its explicit 10-second limit; an isolated rerun reproduced that
timeout and passed the other 51 route cases. The complete CI suite
passed on this head. The same route file passed all 52 cases in CI,
including the first cold import in 7.5 seconds.
- Before the final rebase, recursive typecheck, full build, UI token
gates, 132 targeted server tests, and the complete [CI
workflow](https://github.com/paperclipai/paperclip/actions/runs/34650004085)
passed. The subsequent CI failure was the shard-balance accounting
mismatch fixed here.
- Greptile reviewed `d23c84181` at 5/5 with no outstanding actionable
findings. The complete [current CI
workflow](https://github.com/paperclipai/paperclip/actions/runs/34653327949)
passed on attempt 2. All test, typecheck, build, and canary jobs passed
on the first attempt. Docker setup timed out fetching BuildKit from
Docker Hub; retrying that job and its dependent aggregate succeeded.

## Risks

- Recovery admission changes executable authority. Company, task, agent,
user, approvals, process ownership, and provider termination checks
remain required.
- Explicit continuation starts a fresh conversation with history. It
does not certify unknown external action outcomes or rerun
non-conversation adapters automatically.
- Changing task status alone does not clear an execution hold. The task
now offers an explicit Retry action.
- Historical adapter claims and invocation events take precedence over
current agent settings. Known process or webhook runs retain their hold.
Pre-upgrade rows with no adapter evidence may receive only a new
explicit user turn after termination proof; they do not become eligible
for automatic replay.
- No schema migration or sandbox-image change is required. This branch
has not been deployed to production.

## Model Used

OpenAI GPT-6 through Codex, with repository inspection, code execution,
browser automation, and test execution. The exact deployment model ID
and context window are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [ ] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-11 18:08:14 -05:00
Devin FoleyandPaperclip 1c4bcff2b1 fix(test): await issue lock before retry race assertions (#13273)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Retry decisions must respect changes to an issue owner.
> - Database tests verify this with two concurrent transactions.
> - The test started the competing operation before its fixture held the
lock.
> - That race can fail a correct source verification run and block
deployment.
> - This PR waits for lock acquisition before starting the competing
operation.

## Linked Issues or Issue Description

Refs #13257 for the deployment verification work that exposed this test
race. No duplicate fix was found.

**What happened?**

[Cloud verification job
103424158921](https://github.com/paperclipai/paperclip/actions/runs/34648268409/job/103424158921)
failed because the test did not observe a concurrent issue-row lock
waiter. The fixture and retry operation both started without an ordering
guarantee.

**Expected behavior**

The fixture must hold the issue lock before the competing retry
operation starts. The test must still prove that the retry waits for the
lock and observes the reassignment.

**Steps to reproduce**

1. Add a temporary 50 ms delay before the fixture acquires the issue
lock.
2. Run the promoteOrCancelDueRetry issue-lock test.
3. The original fixture fails with the same missing-waiter error as CI.
4. The synchronized fixture passes with that delay. The delay is not
part of this PR.

## What Changed

- Separate fixture readiness from its transaction completion promise.
- Wait for readiness at both callers before starting the retry decision.
- Propagate transaction failure during setup through Promise.race.

## Verification

- The original fixture fails under the temporary delayed-lock probe. The
fixed fixture passes the same probe.
- All 31 tests in
server/src/modules/run-dispatch/adapters/postgres.test.ts pass after
removing the probe.
- The real concurrent waiter, lock-order, and reassignment assertions
remain intact. No timeout was increased.
- Full local typecheck and build pass (221s and 50s). The full local
test command stopped in its server phase after 10,610 passes, 65 skips,
and 14 failures: 13 existing macOS skill-cache rename/permission
failures and one unchanged Telegram test assertion. The Telegram test
passes in a focused rerun. Later local phases did not run after that
failure. Current-head Greptile is 5/5 with no findings. All 32
current-head checks pass, including full Linux typecheck, build, native
verification, server suites, browser suites, and canary packaging. The
unchanged GitHub browser mock assertion passed its single failed-shard
retry.
- git diff --check passes.

## Risks

- Only test synchronization changes. Production database behavior is
unchanged.
- Awaiting the transaction itself during setup would deadlock the test.
Returning the completion promise inside an object avoids that problem.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, repository tools, and code
execution. The exact serving model ID and context window are not exposed
by this environment.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass — all 31 database adapter
tests pass; full local verification limits are disclosed above
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-11 15:29:16 -07:00
DottaandPaperclip 51b0e01ead fix: resume saved user messages after execution recovery (#13270)
Preserve verified native process-stop evidence and retry saved user messages through normal continuation admission after recovery cleanup. Show the current wait reason and serialize delivery so a saved message starts one fresh turn.

Validated with 410 focused tests, typecheck, build, token gates, all PR CI checks, and Greptile 5/5.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-11 17:12:55 -05:00
DottaandPaperclip 250deab910 fix(runner): keep healthy native sessions alive (#13261)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Native sessions keep a provider process and its work alive across
control-plane operations.
> - A hidden 15-minute turn deadline stopped work even when the agent
timeout was zero.
> - A one-hour runner lifetime and fixed connection lease added two more
limits.
> - Recovery also rejected goal commands because it reconstructed their
startup summary with the wrong protocol version.
> - This pull request removes implicit duration limits and renews
authenticated leases in the harness.
> - Healthy sessions can continue without model action or a user
interface change.

## Linked Issues or Issue Description

Refs #13092 and #12845. Related: #13163 covers sandbox recovery after
app restarts; this change covers session duration and lease renewal.

**What happened?**

A native Codex session stopped after 15 minutes while a tool was still
running. The agent had `timeoutSec: 0`. Recovery then rejected a
`session.goal.get` startup command with `invalid provider startup
ownership fence`.

**Expected behavior**

An unlimited session keeps working while its provider and authenticated
controller remain healthy. Lease maintenance is transparent. Explicit
timeouts, cancellation and revoked authority still take effect.

**Steps to reproduce**

Start a native session with `timeoutSec: 0` and run a tool beyond 15
minutes. Before this fix, the runtime cancels the turn. A recovery
startup that uses a goal command also exposes the protocol-version
mismatch.

## What Changed

- Honor the agent turn timeout. Zero disables the timer. Long explicit
durations use timer chunks to avoid Node timer overflow.
- Default native runner lifetime to unlimited. Keep bounded startup,
reconnect and control-operation deadlines.
- Renew leases over the authenticated connection. Persist renewal before
the reply. Validate identity, epoch and expiry. Handle duplicate
requests and a lost reply on reconnect.
- Freeze renewal during warm ownership transitions and terminal
handling.
- Validate persisted goal startup commands with protocol v2.
- Add duration, renewal, ownership, recovery and real-process regression
tests. Update runner protocol and recovery docs.
- Add no UI components or controls. Renewal requires no model output or
user action.

## Verification

Current head: `348e369c35c5da8bb8be378f4b35dcf6f40882e7`. [CI
run](https://github.com/paperclipai/paperclip/actions/runs/34649767113).

- All 32 checks pass on this head. The two Storybook checks are skipped
as expected. CI includes full build, typecheck, runner verification,
browser suites, server tests and the canary package dry run.
- Greptile reports 5/5 on this head. All review threads are resolved,
and the security scan passes.
- Passed `pnpm -r typecheck` and `pnpm build` locally.
- Passed 219 native-runtime and controller tests, including fake-clock
tests for three weeks of renewal and 30-day explicit timeouts. Six
denial tests confirm that renewal cannot extend expired, revoked or
mismatched authority.
- Passed 337 executor, cancellation and restart-recovery tests, plus 278
Rust runner-core library tests.
- Passed a real runner with a silent fake Codex provider across its
original lease expiry. Runner PID, provider PID, thread and active turn
stayed unchanged. Warm-attach recovery tests also pass.
- Passed all 83 plugin-worker tests and 159 of 161 workspace-runtime
tests locally. The two remaining assertions passed with a canonical
macOS temporary directory, as did the changed runtime fixture. The full
affected server shard passes in CI.
- An unchanged GitHub callback-ordering test failed once in CI, passed
locally in isolation, and passed its one test-shard retry. The final CI
summary is successful.
- The full local `pnpm test:run` sweep was interrupted after dependency
setup failures and load-related timeouts. Identified failing suites
passed in isolated reruns after the dependency repair. The complete test
matrix passed remotely in CI.

## Risks

- Deploy the controller and runner together to enable renewal. Older
peers keep their existing bounded lease behavior.
- Unlimited runtime permits long resource use until completion, explicit
cancellation, configured timeout or loss of valid authority.
- Lease renewal changes authenticated protocol handling. Regression
tests cover stale, revoked and mismatched authority, lost replies and
warm handoff behavior.
- Simulated multi-week tests and a real lease-boundary test do not
constitute a weeks-long production soak.

## Model Used

OpenAI GPT-6 through Codex, with repository inspection, code execution
and TypeScript/Rust test tools. The exact backend revision and
context-window size are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change and contains no internal
Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-11 17:09:43 -05:00