Commit Graph
1579 Commits
Author SHA1 Message Date
Devin FoleyandPaperclip 803d7e2d52 Merge reviewed ACPX receipt retention and deterministic test teardown
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-04 00:23:08 -07:00
Devin FoleyandPaperclip 1cf7bba6f2 Merge reviewed ACPX receipt retention and deterministic test teardown
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-04 00:23:05 -07:00
Devin FoleyandPaperclip 79b7516322 fix: retain ACPX usage when receipt persistence rejects
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-04 00:22:37 -07:00
Devin Foley 4f9dd4d04e Merge quota reconnect recovery and current master
Co-Authored-By: Paperclip <noreply@paperclip.ing>

# Conflicts:
#	server/src/services/heartbeat.ts
2026-10-04 00:03:13 -07:00
Devin FoleyandPaperclip 7c6d3f1526 Merge current master and adapter startup proof
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-04 00:00:59 -07:00
Devin FoleyandPaperclip f0b683a24e Merge current master and resolved fixture synchronization
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-03 23:55:14 -07:00
Devin FoleyandPaperclip 99c84ccca2 Merge current master into accounting test isolation
Keep upstream runtime startup assertions, which independently fix the same PID-persistence race, alongside our port-claim isolation and canonical path fixtures.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-03 23:54:09 -07:00
Devin FoleyandPaperclip a9c6f25b88 Merge bounded provider record accounting into core stack
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-03 21:45:30 -07:00
Devin FoleyandPaperclip c4f738d112 Merge bounded provider record accounting into quota stack
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-03 21:45:27 -07:00
Devin FoleyandPaperclip fb8b03a083 fix: bound accounting strings before buffering provider records
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-03 21:45:23 -07:00
Devin FoleyandPaperclip cde30114b2 Merge credential and adapter review follow-ups into accounting stack
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-03 21:38:49 -07:00
Devin FoleyandPaperclip beb28fef65 Merge full-stream accounting fixes into quota stack
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-03 21:33:57 -07:00
Devin FoleyandPaperclip 6e7168ac5c fix: retain full-stream usage and scope biller inference to its provider
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-03 21:33:54 -07:00
Devin FoleyandPaperclip 7cf8df553d fix: serialize managed credential refresh with reads and secret edits
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-03 21:30:51 -07:00
Devin FoleyandPaperclip 05035f9f65 fix: address accounting recovery and budget review findings
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-03 21:15:10 -07:00
Devin FoleyandPaperclip dce0c0f265 Merge reviewed quota and adapter fixes into durable accounting
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-03 21:06:51 -07:00
Devin FoleyandPaperclip 2c29548c8c Merge reviewed adapter receipt fixes into account quota reporting
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-03 21:02:21 -07:00
Devin FoleyandPaperclip 17bb7679b5 test: clean up interrupted usage fixture formatting
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-03 21:02:05 -07:00
Devin FoleyandPaperclip c858cf52b0 fix: settle adapter usage only with terminal accounting evidence
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-03 21:01:46 -07:00
DottaandPaperclip eb049aebf2 feat(skills): let agents update company skills safely (#15049)
## Thinking Path

> - Paperclip is an open source control plane for AI-agent companies.
> - Company skills give agents reusable work instructions.
> - Skill Studio can edit skill files and save version history.
> - Agents can create a skill, but they do not have a first-class update
tool.
> - An agent update needs a version check and safe retry behavior to
prevent lost edits.
> - This pull request adds `update_skill` through the existing company
skill file API.
> - The change keeps company policy, version history, and audit records
in one path.

## Linked Issues or Issue Description

**Subsystem affected**

Cross-cutting: the server API, shared validation, and runner tool
catalog.

**Problem or motivation**

An agent can create a company skill but cannot update its `SKILL.md`
through a first-class tool. An unguarded retry can also create duplicate
versions or overwrite a newer edit.

**Proposed solution**

Add `update_skill` with a required current version ID and a retry key.
Route it through the existing skill file API. Reject stale versions and
changed-input retries. Save the version and audit event together.

**Alternatives considered**

A separate write endpoint would duplicate the Skill Studio mutation path
and policy checks. This PR reuses that path instead.

**Roadmap alignment**

This work extends Skills Manager and Skill Studio, which are listed in
`ROADMAP.md`.

**Additional context**

The tool accepts a complete `SKILL.md`, not a partial patch. Callers
must read the current version before they edit it.

## What Changed

- Add optional version and retry fields to the existing skill file
update contract.
- Add a guarded API update with a stable retry receipt and attributed
audit event.
- Add `update_skill` to native and semantic runner tool catalogs, with
mode and policy gates.
- Add unit, integration, protocol, and semantic-tool regression
coverage.
- Document agent use and extend the OpenAPI request contract.

## Verification

- Focused tests and direct server and runner TypeScript checks passed
before this PR.
- `git diff --check` passed after the rebase onto `master`.
- CI passed on the latest PR head, including the full test matrix,
typecheck, and build. Local full typecheck and build stopped because
`cargo` is not installed. The local full test run ended without a
verdict.
- No dedicated end-to-end eval scenario was added or run. The protocol
coverage and semantic-tool test cover the new action deterministically.
- Reviewers can read a skill version, call `update_skill`, repeat the
same key, then try a stale version and a changed-input key. Only the
first edit must create a new version.

## Risks

- File writes and database transactions must stay in sync when a write
fails. The integration tests cover failed writes and retry behavior, but
CI must verify them on the PR head.
- Existing Skill Studio callers do not send the new optional
coordination fields. Their request shape remains valid.

## Model Used

- OpenAI Codex CLI assisted with this change. The runner did not expose
the exact model ID or context window. The agent used code execution and
repository tools.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details; exact model ID and context window were not exposed)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass (focused tests; full suite
is pending CI)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green (53 pass, 4 skip on the latest
head)
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-03 12:37:55 -05:00
DottaandPaperclip b17019e14d fix(agents): reduce default instructions and qualify stock harnesses (#14948)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Its adapters supply task context and access to Paperclip skills and
tools.
> - The default hire manual and shared prompts also repeat general work
procedures.
> - Those procedures overlap with stock provider instructions and the
Paperclip skill.
> - Existing E2E fixtures supply a QA manual, so they do not qualify the
production default.
> - This pull request reduces the generic instructions and adds real
default-hire coverage.
> - The benefit is less competing guidance, with inspectable evidence
for preserved skills and task context.

## Linked Issues or Issue Description

Refs: #14920. That merged change preserves native Codex base
instructions. This PR covers the default manual, shared legacy prompts,
operational skill guidance, and the narrowly approved ACP
skill-discovery/session-environment repair for measured delivery and
credential-persistence failures.

**What existing behavior does this improve?**

New non-CEO hires without a custom bundle and legacy task/chat startup
and continuation prompts.

**Current behavior**

The shipped default manual contains 602 words. Generic task/chat prompts
and ordinary resume deltas repeat work procedures already available
through the harness and Paperclip skill.

**Proposed behavior**

The default manual contains only the eight-word company identity. Shared
startup prompts retain identity and connection guidance. Ordinary resume
deltas retain current work context without the generic execution
contract.

**Reason and benefit**

Let the stock harness guide general work. Keep Paperclip-specific
capabilities and independently test default hires, skills, ordered
comments, and chat restart.

**Breaking changes**

New default hires receive less guidance. Existing saved manuals,
explicit custom bundles, CEO templates, and specialized wake contracts
retain their behavior. The obsolete includeExecutionContract option
remains accepted for source compatibility.

## What Changed

- Reduce the default hire manual to one sentence.
- Reduce shared task/chat defaults and remove the generic
ordinary-resume contract.
- Keep connection guidance, auth, skills, custom prompts, and
specialized wake context.
- Add credential-free instruction-boundary gates and 26 explicit Product
E2E cells across eight legacy/native profiles, including two focused
Paperclip-storage cases.
- Capture public hire receipts before providers run, then grade
delivered prompts and independent task/chat outcomes.
- Add an early legacy skill API recipe for saving a task document,
checking the saved revision receipt and linking the document. Improve
stock task/heartbeat skill-selection metadata and show a clickable
Markdown UI-link example. Keep native tool completion separate.
- Advertise bounded routing descriptions and exact successfully staged
SKILL.md paths in legacy ACP Claude; keep full bodies on demand and
preserve remote path rebasing.
- Remove only the provider environment from copied persisted ACP session
records, while loading current run credentials and preserving all other
options/conversation state.
- Regenerate both capability metadata inventories and reject stale
manifests/inventories before provider admission.
- Publish the original reduction and focused skill-repair comparisons,
preserving all failures, automatic recovery, cost coverage and
limitations.

## Verification

**Behavioral qualification remains pending.** Original legacy ACP Claude
loses the issue document only in the reduced cohort beneath an unchanged
credential failure. A source-backed diagnosis finds that neither
ordinary assignment reads the staged operational skill, while the
runtime persists provider environment in session state. The new common
repairs expose skill metadata/path and omit persisted env; strict
document and credential guards stay intact. [Inspectable diagnosis and
retained
hashes](https://github.com/paperclipai/paperclip/blob/9f654db4541d3d002769c988f6e51fc0b08dadbd/doc/plans/2026-10-03-legacy-acp-claude-readiness.md).

Current repair head `de0965984ff3edf611ae6d0e7ca5c7d5ae3947bb`
incorporates master `569c7203aa24b95440682983ce7940ba1d4247bd` (merged
#14961/#15007). All 222 affected adapter tests, adapter-utils/E2E
typechecks, and final 96 variant/grader/retry calibrations pass. The
frozen historical comparator is
`c25697f4260b6f3adfea143c3ae9932e2f42986d`: 8,280 of 8,291 paths
identical, exactly two production instruction paths plus nine declared
unit expectations differ. The operational skill/discovery/environment
repairs, selected model/profile/task/core grader/auth/permissions/retry
policy are identical. Both actual launcher prepare→verify admissions
pass with zero providers. [Immutable manifest and exact
receipts](https://github.com/paperclipai/paperclip/blob/9f654db4541d3d002769c988f6e51fc0b08dadbd/doc/plans/2026-10-03-legacy-acp-claude-evidence/manifest.json).

One original legacy ACP Claude cell per variant is authorized, with
enforced single campaign attempts, 12-minute deadlines and company/agent
1,000-cent hard stops; every product recovery run/cost is counted.
Actual live outcomes are pending. Current normal CI has one failed
server shard and failed aggregate verify under diagnosis; other normal
gates including typecheck/build/Rust/all eight browser shards pass.
Fresh review completed successfully; the valid historical startup/resume
masking finding was fixed with per-invocation task/chat checks and
strict complete-snapshot capture, calibrated and resolved. Prior heads,
failures and campaigns below remain historical evidence, not checks on
this repair head.

- Prior head `36aa4d81c49a1a8f6f04b1a068fae19aa901955f` is replayed on
merged hiring master `862a5758ba0e88a33232c1f1fa645e85c38a3113`. All 52
current-head checks pass with two intentional Storybook skips, including
repository typecheck/test/build and the browser shard. Fresh Greptile is
5/5 with zero unresolved review threads. Exact-head stock prerequisites
pass 599 assertions (598 TypeScript + 1 Rust), all six gates and
retained receipt verification, zero providers/source errors. Fingerprint
`a7f5a22d860a88fe20cce213c6d5e0004788f32c8363930729aea4fd740ad16d`.
Combined catalog/hiring calibrations pass 67 assertions, E2E typecheck
and 26-cell stock discovery pass. Canonical contract/inventory checks
and the later issue-derived reference calibration are retained; that
reference-only follow-up is not live-qualified by earlier frozen runs.
- Prior full repository typecheck/build passed. The complete local
Vitest run executed 14,956 tests: 14,870 passed, 83 skipped, three
timing failures. All three affected files passed unchanged narrow
reruns; original failures remain retained. Current-head CI now passes
the full general checks; the original local failures remain retained.
- The original 24-pair default-manual/shared-prompt comparison has two
new overall classic Claude/OpenCode document-delivery failures plus an
additional legacy ACP Claude document loss beneath an unchanged
credential-guard failure (not closed by later runs), two newly passing
OpenCode ordered cases, seven unchanged failures and 13 unchanged
passes. Equal 15/24 totals do not establish behavioral equivalence.
[Complete original
report](https://github.com/paperclipai/paperclip/blob/875f4c397d9e8c3f12f39dedd59abaf1eaf5236e/doc/plans/2026-10-02-stock-harness-live-comparison.md).
- The skill-only repair holds the eight-word manual/shared prompts and
merged #14920 fixed. All four matched profile configurations and 203
fixture/behavior files match. Candidate
`abd0b628ca642c09a54a4edc56a5227402f6686e` varies only the two skill
sources against baseline `bc83fe030234439ac51279502a28803958963e2e`.
[Candidate
workflow](https://github.com/paperclipai/paperclip/actions/runs/37060885547)
and [baseline
workflow](https://github.com/paperclipai/paperclip/actions/runs/37060888047)
each pass 571 exact-source prerequisites before providers; all eight
cells clean up successfully. Failed campaigns publish successfully and
remain failed.
- Repair pairs: Claude original Fail → Pass; Claude explicit Pass →
Pass; both OpenCode cases Fail → Fail. Explicit OpenCode's handoff
worsens beneath the unchanged failing UI-link grade: baseline gives a
clickable API URL, candidate gives a code-formatted path without an
anchor. The request's usable-link wording is narrower in the UI-only
oracle. [Complete repair report and safe
projection](https://github.com/paperclipai/paperclip/blob/875f4c397d9e8c3f12f39dedd59abaf1eaf5236e/doc/plans/2026-10-02-legacy-document-skill-repair.md).
- The subsequent narrow stock metadata/link correction has two matched
Pass → Pass cases, zero new machine failures/passes and no pending
pairs. Both original-case handoff links remain deficient: candidate uses
a wrong PAP prefix, baseline supplies a bare prefix-less slug path; the
preserved original oracle only requires a durable document. Both
explicit clickable UI-link cases pass revision/content/link grading. All
four exact-source 587-check gates, single assignment runs and cleanup
pass. This does not establish fix causality because baseline also
succeeds. [Candidate
workflow](https://github.com/paperclipai/paperclip/actions/runs/37069547401)
freezes `fe9dc1e3c518825242ed889ab9c8352986f8c2ed`; [matched
baseline](https://github.com/paperclipai/paperclip/actions/runs/37069552374)
freezes `0d7ecfa96d72fba79b7f0a25052b42c0686c0488`. This is a skill-only
comparison with reduced manuals/shared prompts held constant, not a
repeat of the historical-manual comparison. Only original and clarified
explicit classic OpenCode cases are selected, two per variant/four
expected turns. 8,242 other tracked files and both profile hashes match;
protected workflows admit each exact source before credentials.
[Complete qualification
report](https://github.com/paperclipai/paperclip/blob/74d0d3d945f4c52d0814b5a845ab5bd09f33cd6b/doc/plans/2026-10-02-opencode-skill-routing-link-qualification.md).
Candidate original loads Paperclip/reference before saving publicly;
baseline original loads it after writing locally, then saves publicly
within the same assignment. Reported cost totals are $0.0107824490
candidate / $0.0107909015 baseline, with unmetered runtime. The later
reference-only issue-derived link correction is provider-free calibrated
and **not live-qualified** by these frozen runs; no further paid runs.
- Retained tool calls show the repaired original OpenCode assignment
loads only its assigned output skill before writing locally. Operational
Paperclip is first loaded during automatic disposition recovery; its
early recipe is visible then, but it never saves the missing document.
Explicit candidate loads Paperclip and reads the new reference before
saving successfully. All nine actual runs are counted. Reported LLM
totals are $0.3802537209 baseline and $0.4918990161 candidate; local
runtime is unmetered.
- Initial setup, packaging, cancelled/missing-cell recovery, callback
test and relative-output attempts remain retained. No completed provider
failure was rerun. Frozen measurement branches are unchanged by later
canonical metadata maintenance.
- Run `pnpm test:e2e:runner:stock-harness`, `pnpm test:e2e:runner:unit`,
and `pnpm test:e2e:runner:typecheck`. Select `stock-harness` explicitly
for paid execution; it is excluded from `--all`.

Prior-head integration: `36aa4d81c49a1a8f6f04b1a068fae19aa901955f`
replays this PR on merged hiring #14985
(`862a5758ba0e88a33232c1f1fa645e85c38a3113`), preserving the four
explicit custom-CEO-bundle checks, minimal generic manual boundary, and
both suites. The combined fixture catalog and hiring calibrations pass
67 assertions; exact-head stock prerequisites pass 599 assertions (598
TypeScript + 1 Rust), all six gates and retained-receipt verification,
zero providers/source errors, fingerprint
`a7f5a22d860a88fe20cce213c6d5e0004788f32c8363930729aea4fd740ad16d`. E2E
typecheck and 26-cell stock discovery pass. Fresh current-head CI passes
all 52 checks with two intentional skips, and fresh Greptile is 5/5 with
zero unresolved review threads.

The prior source-plan browser failure is retained: a deterministic
process fixture replayed its last `fixture:plan` command on
`chat_task_completed`, writing revision 2 with identical body after the
approval handoff. This was not paid provider execution. Rebased
current-head CI passes the same assertion without an old-head retry or a
change to that browser fixture.

The merged hiring change was measured separately on immutable matched
unions, with this reduced/shared/operational context and native
completion guidance held constant. [Complete original two-profile
report](https://github.com/paperclipai/paperclip/blob/f0512647656be78e48abd8c22a3078db8bf6bcd2/doc/plans/2026-10-02-hiring-template-live-comparison.md):
[candidate](https://github.com/paperclipai/paperclip/actions/runs/37075466208)
/ [historical
baseline](https://github.com/paperclipai/paperclip/actions/runs/37075469463),
705 provider-free prerequisites each. Both pairs are unchanged Fail →
Fail on the exact-five count, with six core delivery checks passing all
four cells; 28 actual successful runs include eight automatic completion
wakes, zero retries, four successful cleanups. Source-read coverage is
uncomparable, actual model charges unknown. Separately versioned
provider-free accounting remains analytical work; original verdicts are
preserved. This does not rerun or qualify the completed default-manual
or native campaigns.

## Risks

- Legacy ACP Claude's additional delivery loss is not closed by any
later matched run and blocks the no-extra-failing-behavior merge
criterion. Legacy document delivery may have relied on the prior
manual/shared prompts. The early skill repair improves Claude in one
trial; the later OpenCode pairs pass in both variants and cannot
establish causality or robust recovery. Both original-case links remain
deficient beneath the storage-only grade. The later issue-derived
reference correction has only provider-free validation. Native
finish/block descriptions must not be supplied to legacy agents.
- The comparison holds merged native Codex fix #14920 constant; it
cannot measure that fix's before/after task performance.
- These bounded skill/context/chat workflows do not measure general
coding quality. Unrepresented providers remain unqualified.
- Saved manuals and old Codex sessions are not automatically migrated.
Codex through ACP still has a separate base-instruction follow-up.

## Model Used

OpenAI Codex, GPT-6 family as identified by this session. The exact
deployment ID and context-window size are not exposed. The assistant
used reasoning, repository tools, code execution, and delegated PR/eval
work.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` /
`Closes: #` / `Refs: #` OR (b) described the issue in-PR following the
relevant issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass (relevant suites and all
three unchanged narrow reruns pass; complete-run timing failures
retained in Verification)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green on the new repair head
(prior-head checks retained above)
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
on the new repair head
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-03 12:32:42 -05:00
DottaandPaperclip dd868ed125 fix(runner): share native completion tool guidance (#14961)
## Thinking Path

> - Paperclip manages AI agents and their work.
> - Native Runner agents report completion through finish and block
tools.
> - The providers receive different descriptions for those tools.
> - Completion guidance belongs with the tools that enforce the result.
> - This pull request shares the descriptions and refreshes retained
catalogs.
> - A separate native suite checks completion and blocking on production
defaults.
> - Legacy agents retain their separate skill and API paths.

## Linked Issues or Issue Description

Refs: #14920, #14948, #14985.

**Current behavior**

Native Codex and MCP bridges describe finish and block differently.
Retained provider sessions can keep old descriptions.

**Proposed behavior**

Native providers receive the same finish and block descriptions. The
descriptions cover report selection, validation feedback, returned
outcomes, approval gates and final-answer timing. Retained native
sessions refresh from v13 to v14.

**Reason and benefit**

Put the completion procedure next to its native tool. Preserve stock
base instructions, schemas, permissions and terminal semantics. This PR
now stands alone on master. It contains no reduced manual, shared prompt
or operational-skill changes from #14948.

## What Changed

- Add canonical native finish and block descriptions. Use them in direct
Codex and both native MCP bridges.
- Advance the native tool contract to v14. Cover old-v13 refresh without
replacing task identity or prior history.
- Check authenticated tool catalogs, provider start/resume frames and
serialized daemon catalogs.
- Add an independent, explicit-only native completion suite. Preserve
the original assigned-skill durable-document journey. Pair it with a
concrete whole-task blocker across Codex, ACPX Claude and OpenCode.
- Verify the actual public production default bundle and budgets before
execution. Require independent durable disposition, native
result/terminal receipts and observable provider-final ordering.
- Correct the blocker browser oracle to accept the requested
explanation. Keep exact owner/action/scope checks. Calibrate positive,
missing and contradictory replies.
- Preserve only actual `tool_call` terminal names (`paperclip_finish` /
`paperclip_block`) in the native compatibility run-log projection.
Require the same named call ID through its finishing result; retain all
other redaction boundaries.
- Admit verified hosted shallow checkout/build hydration and bind the
selected runnerd to exact source/archive/binary provenance. Hosted cells
truthfully reuse the existing trusted build; local admission executes
Rust calibration. Forward only public source/run identifiers through
both launcher preflight subprocess paths.
- Enforce single attempts in the launcher for opted-in fixtures. Keep
ordinary retry policy unchanged. Run exact-source, credential-free
admission before credential loading.

## Verification

- Frozen candidate: `d6e59e4712a3158ab4cd7d58deff1389b4578c21`, based on
master `59c07ede72dc08b8aba149a01cc11e0b7a204621`; historical
descriptions: `e74ed61a69fbdd8b3a8f15dd6456bc3140246e33`. Exactly the
five original native production files and six unit tests differ. Both
carry identical corrected fixtures, strict named finishing-call grader,
closed compatibility carrier and admission. Defaults,
profiles/models/auth/permissions and manifest bytes match.
- Actual launcher `prepareNativeCompletionPreflight` →
`verifyNativeCompletionPreflight` admission passes on both exact refs
with zero providers: candidate 132 / historical 127 selected TypeScript
assertions, 128 Node calibrations and one Rust normalization calibration
each; E2E typecheck, manifest checks, selected binary provenance and
six-cell discovery pass. Each has 257 explicitly skipped unrelated
assertions, not coverage. The credential-free environment calibration
exercises both real prepare/verify subprocess options with public hosted
identifiers and rejects credential/ambient overrides. Complete actual
launcher prepare→verify also passes on both frozen refs with explicitly
synthetic hosted metadata/verified archives, separately labeled as
calibration rather than a trusted GitHub run. Exact framed provenance
parsing and mock source identity are calibrated without relaxing the
real verifier.
- [Complete matched qualification
report](https://github.com/paperclipai/paperclip/blob/532066620b88e8731a5211fbe1cbc48ce8c7dd1a/doc/plans/2026-10-02-native-completion-master-qualification.md),
[immutable
manifest](https://github.com/paperclipai/paperclip/blob/532066620b88e8731a5211fbe1cbc48ce8c7dd1a/doc/plans/2026-10-02-native-completion-calibrated-manifest.json)
and [closed retained
audit/hashes](https://github.com/paperclipai/paperclip/blob/532066620b88e8731a5211fbe1cbc48ce8c7dd1a/doc/plans/2026-10-02-native-completion-calibrated-results/comparison.json)
are inspectable. All six candidate cells pass; historical descriptions
pass five. Paired outcomes: **zero new failures, one new pass (Codex
blocker), five unchanged passes, zero pending pairs**. [Candidate
campaign](https://github.com/paperclipai/paperclip/actions/runs/37098728980)
and [historical
campaign](https://github.com/paperclipai/paperclip/actions/runs/37098815696)
each execute six original attempt-1 native runs, with no campaign retry
and successful cleanup. Their trusted workflow revision is
`215586d127e97c9301d86e769a39a15c13298ca2`, separate from measured
source. [Candidate public
HTML](https://d1p6rlowie26tp.cloudfront.net/runner-e2e/campaigns/gha-37098728980-1/index.html)
and [historical public
HTML](https://d1p6rlowie26tp.cloudfront.net/runner-e2e/campaigns/gha-37098815696-1/index.html)
retain declared screenshots.
- Independent candidate evidence agrees with all original grades: 51
strict native checks, 12 served-default/budget checks and 21 original
skill/document checks pass. The historical Codex blocker saves the
correct whole-task blocker but omits the required marker from its actual
provider final and identical saved reply. This is not semantic-summary
fallback. Its original browser/matcher failure stays retained; the
additional native snapshot/grade and workspace before/after digest were
never written and are not fabricated by the separate API/PRP audit.
Historical Codex completion has one failed finish followed by success
within the same native run; the public receipt records no failure
reason. All twelve runs and their usage remain counted. Reported
model-cost subtotals are $0.00421482 historical/$0.00437391 candidate;
Codex/Claude zero entries have unknown billing type, actual invoices are
unverified and hosted execution cost is unmetered. One matched trial
supports no extra failure within these six cases, not broad statistical
or coding-quality equivalence.
- Initial hosted `e18c2cf9` / `459455ac` and subsequent `0a9c5a7` /
`00a761b` cohorts each stopped before providers in all twelve cells. The
latter failed a mocked-receipt unit test under ambient hosted metadata;
all source/build proofs passed. [All twelve later setup
receipts](https://github.com/paperclipai/paperclip/blob/402ee94c52273ad58de355ae9a7d562dd22f8101/doc/plans/2026-10-02-native-completion-qualified-hosted-setup.json)
are retained. [Exact failed setup
receipts](https://github.com/paperclipai/paperclip/blob/27653eb1a8f8ce839776d760f4563f672e5a706c/doc/plans/2026-10-02-native-completion-master-hosted-setup.json)
and the original manifest remain intact. Local sandbox-denied loopback
and stale anchor-expectation attempts are retained separately; unchanged
appropriate assertions were corrected/admitted before paid dispatch. Old
anonymous OpenCode streams are not assigned inferred tool names or
retroactively passed.
- Full provider-free E2E support previously passed 927 tests in 67
files. Exact-head d6 normal CI run `37098409915`, attempt 1 passes full
repository typecheck/build/tests, Runner Rust/static checks, all browser
shards/aggregate and canary: 52 check-runs pass, four intentional skips,
Snyk passes. Fresh Greptile check `111132956342` is 5/5 with zero
unresolved threads. Source-specific deterministic tests do not
substitute for the bounded live comparison.
- Earlier native source `9138f570c341c251a5727c32d6615ce238bc8e03` is
archived. Its [complete reduced-manual-context
report](https://github.com/paperclipai/paperclip/blob/9138f570c341c251a5727c32d6615ce238bc8e03/doc/plans/2026-10-02-native-completion-live-comparison.md)
remains intact, including original failures, grader limits and
provider-free replay. It is not current-master-context qualification.

## Risks

Changed tool text can change model behavior. The completed six-pair
qualification shows no extra failing outcomes in this bounded trial;
other tasks and repeated-run variance remain unmeasured. Observable
final ordering does not prove provider feedback consumption. Public
evidence can fail closed if a provider does not expose the required
result sequence. This slice does not remove native fixed prompts or
measure general coding quality. No database, schema, permission or
legacy completion changes occur.

## Model Used

OpenAI Codex, GPT-6 family, with code inspection, execution and tool
use. The exact deployment ID and context-window size are not exposed in
this session. They are unavailable rather than inferred from the model
menu.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-03 06:20:38 -05:00
DottaandPaperclip cc67d4e1d8 fix: preserve steering and recover stopped task conversations (#15015)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - A task conversation must let a user guide a running agent and resume
stopped work.
> - The active run owns its input protocol, even when the user changes
the next model or effort.
> - Queue delivery waits for a provider receipt, which must be able to
persist during the request.
> - A stopped startup also needs a clear user action that passes normal
task admission.
> - This pull request fixes steering delivery, makes queue actions
immediate, and restores explicit continuation.
> - The benefit is a responsive conversation that can recover without
losing saved input.

## Linked Issues or Issue Description

**What happened?**

A queued message could change from Steer to Interrupt while a native run
prepared. A steer request could wait on its own database lock and fail
to deliver. A stopped startup could then leave the conversation without
a working Retry or message continuation. Interrupt also waited for the
server and showed a toast.

**Expected behavior**

The active run keeps its input protocol. Steer delivers input to that
run. Steer and Interrupt clear the submitted queue rows and show the
input in the conversation immediately. Failed delivery restores the
latest queue with an inline error. An eligible stopped run offers Retry,
and authenticated user input can start a fresh turn through normal task
admission.

**Steps to reproduce**

1. Start a task with a native Paperclip Runner.
2. Change the selected model or effort while that run prepares.
3. Queue a message and press Steer.
4. Observe the provider receipt and queue state during the request.
5. Stop a startup before its provider process begins, then try Retry or
send a new message.
6. Repeat queued delivery with a legacy runner and press Interrupt.

**Paperclip version or commit**

Reproduced on the parent of this branch, `59c07ede7`.

**Deployment mode**

Authenticated private deployment. The fixes also cover local task
conversations.

Related work: Refs #12834, Refs #13354, Refs #13275. The open refactor
in #13160 moves the same queue route; it does not fix the receipt lock
or stopped-run continuation addressed here.

## What Changed

- Select queue behavior from the active run's immutable dispatch and
runtime resolution.
- Leave the run row unlocked during provider acknowledgement, then lock
and read it before merging the receipt.
- Retain queued input if the target run stops during that wait. Keep
inline delivery errors visible after empty queue updates.
- Permit exact Retry and authenticated continuation after verified
native startup cancellation. Preserve pause, approval, budget,
ownership, and process-stop gates.
- Carry undelivered native queue input into a fresh turn once the old
execution is confirmed stopped.
- Show Steer and Interrupt input in the conversation and clear submitted
composer rows immediately. Restore the latest queue inline on failure.
Remove delivery toasts.
- Keep optimistic delivery stable across stale polls, empty queues, and
paginated history. Preserve classic Interrupt error handling.
- Document recovery and optimistic delivery behavior. Add regression
tests across server, shared queue projection, and UI boundaries.

## Verification

- Red-green regression tests reproduced the queue protocol, receipt
lock, stopped-startup continuation, and optimistic delivery failures.
- The focused server route, continuation, queue, and runner boundary
suites passed during implementation.
- The queue-route suite passes with 78 tests. The three complete
conversation UI suites pass with 347 tests.
- UI typecheck, production build, and `pnpm check:token-gates` pass.
- Workspace `pnpm -r typecheck` and `pnpm build` pass. The local
monolithic `pnpm test:run` is still running; remote CI verifies the
complete suite on the latest commit.
- All CI gates pass on `bd9031ad56abfcde13d13a13488c1b9217c2fd3a`,
including the full test shards, runner verification, browser E2E,
typecheck, release registry, and canary dry run.
- Greptile reports 5/5 for that commit. Both review threads are
resolved.

## Risks

This changes queue display and explicit continuation admission. The UI
must restore rejected delivery without losing other-session edits. The
server must preserve concurrent provider result updates and must not
resume a process whose stop is uncertain. Focused tests cover these
boundaries. This change has no database migration.

## Model Used

OpenAI Codex, an agent based on GPT-6. The exact runtime model ID and
context window are not exposed in this session. Used reasoning,
repository tools, code execution, and browser inspection.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 22:07:14 -05:00
Devin FoleyandPaperclip c0aa8f879d fix: integrate reviewed adapter and quota contracts into accounting
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-02 17:45:27 -07:00
Devin FoleyandPaperclip 5137effc6f fix: integrate incremental usage checkpoints with quota reporting
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-02 17:45:26 -07:00
Devin FoleyandPaperclip 014810c58d fix: checkpoint every usage update with incremental protocol parsers
Use provider terminal evidence for completeness; an OpenCode successful EOF closes its step-based stream. Preserve immutable snapshots and propagate partial completeness through final results.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-02 17:45:06 -07:00
Devin FoleyandPaperclip c93ef478b3 fix: carry reviewed adapter checkpoints into quota reporting
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-02 17:34:12 -07:00
Devin FoleyandPaperclip 2a811ea1a9 test: forward stdin through the Cursor fixture runner
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-02 17:33:49 -07:00
Devin FoleyandPaperclip f4100b256e fix: flush attempt receipts and surface checkpoint failures
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-02 17:27:02 -07:00
Devin FoleyandPaperclip 5997745d77 fix: carry quota review fixes into durable accounting
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-02 17:01:54 -07:00
Devin FoleyandPaperclip 5825f92c62 fix: retain quota caches across reads and cancel expired probes
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-02 17:01:49 -07:00
Devin FoleyandPaperclip 1815474597 fix: report pending execution phase at Stop timeout (#14990)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The server owns each adapter execution and waits for it to settle
after Stop.
> - A Stop timeout reports that termination remains unverified.
> - Existing phase timings arrive only after their work completes, so a
stalled await has no timing.
> - This pull request samples the pending phase when the Stop timer
expires.
> - Operators can identify the pending operation without treating
diagnostics as stop proof.

## Linked Issues or Issue Description

**What existing behavior does this improve?**

The opt-in Sentry context for an unconfirmed adapter Stop timeout.

**Current behavior**

The timeout includes execution identity but no pending phase. A session
close, instruction collection, workspace restore, or diagnostic write
can remain pending without producing its completion timing.

**Proposed behavior**

Add a closed-list phase and elapsed milliseconds from the exact live
execution control. Sample them when the timeout fires. Report `unknown`
and a null age when the control or attribution is unavailable.

**Reason and benefit**

The next timeout can identify which operation is still pending. It does
not require task text, paths, provider output, or additional database
writes.

**Breaking changes**

No API or execution behavior change. The existing opt-in error context
gains two fields. Related public work: #14639 added Stop identity
diagnostics; #14866 and #14945 cover instruction cleanup and teardown
outcomes. This change adds pending attribution to those paths. The
native Stop work in #14802 remains separate.

## What Changed

- Add a bounded tracker per execution control. Token scopes support
nested and overlapping awaits. A late release cannot clear a newer
scope.
- Track adapter execution, ACP cancellation and settlement, diagnostic
writes, and host cleanup. Keep a coarse host scope until the executor
finishes.
- Sample only the matching current control and settlement promise at
timeout. Freeze the sanitized result. Use a monotonic clock and cap
elapsed time at one day.
- Test stalled operations, repeated Stop calls, stale and wrong-run
controls, callback failures, scope bounds, and the real Sentry SDK
context.

## Verification

- `pnpm -r typecheck` passed.
- `pnpm build` passed.
- Six focused suites passed: 79 tests. They cover pending scopes, Stop
control ownership, real ACP settlement stalls, and Sentry context
isolation.
- The real Sentry SDK contract ran with the audited optional peer
`@sentry/node@10.71.0` installed outside the workspace. Valid phase and
elapsed values were exported; arbitrary labels and nonfinite elapsed
values were rejected.
- An independent agent reviewed the production diff and ran the focused
tests without blockers.
- `git diff --check` and a redacted Gitleaks scan passed. The local full
`pnpm test:run` was stopped during its large serial server batch to
avoid duplicating the sharded CI suite. No complete local broad-suite
pass is claimed.
- All CI gates passed on `c223237b58aa8d479d1c66d7d399de30270bac4f`: 54
successful checks and two expected Storybook skips. This includes the
full sharded test suite, typecheck, build, real Sentry SDK isolation,
browser tests, canary dry run, and the security scan after the PR became
ready for review.
- Greptile scored the same commit 5/5 with no actionable findings or
unresolved review threads.

## Risks

This is diagnostic instrumentation. Cancellation, deadlines, teardown
order, termination proof, and file recovery proof remain unchanged.
Unsupported or uninstrumented work uses a coarse phase. Tracker overflow
fails closed to `unknown`. The tracker emits no new run-log or Telemetry
event. The existing Sentry opt-in gate remains in place.

## Model Used

OpenAI Codex, GPT-6. The agent used code inspection, local command
execution, automated tests, and an independent agent review. The runtime
did not expose a more specific model identifier or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 16:55:38 -07:00
Devin FoleyandPaperclip 4154638e71 fix: make run accounting durable and budget updates atomic
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-02 16:45:54 -07:00
Devin FoleyandPaperclip f9163760b9 fix: scope subscription quota reports to authorized company accounts
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-02 16:41:32 -07:00
Devin FoleyandPaperclip b827836835 fix: checkpoint adapter usage and preserve unknown prices
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-02 16:39:07 -07:00
Devin FoleyandPaperclip 4abff286c2 fix: retain resolved ACP execution timeout metadata (#14986)
## Thinking Path

> - Paperclip manages agent work through adapters and heartbeat runs.
> - ACP adapters resolve a timeout for the selected execution target.
> - An untouched sandbox timeout uses a four-hour default.
> - Heartbeat finalization rebuilt the metadata from the stored zero.
> - This made a timed-out sandbox run report an effective timeout of
zero.
> - This change retains the adapter's resolved policy for accurate run
diagnostics.

## Linked Issues or Issue Description

**What happened?**

ACP sandbox runs with `timeoutSec: 0` use the four-hour default. Their
terminal metadata reports `effectiveTimeoutSec: 0` and `timeoutSource:
config` because heartbeat finalization only reads the stored agent
configuration.

**Expected behavior**

The result must report the policy the adapter used: `14400` and
`sandbox_default`. Explicit limits, fractional limits, explicit
unlimited overrides, and local defaults must keep their resolved values.

**Steps to reproduce**

Run an ACP adapter on a sandbox target with `timeoutSec: 0`. Compare the
start log's four-hour policy with the terminal result's effective
timeout. The new tests exercise the adapter result and the heartbeat
metadata merge without waiting four hours.

**Paperclip version or commit**

Reproduced from `6eaf218924f0a89faf1c02eb0d6877a6c5c8a2cb`.

**Deployment mode**

Self-hosted server with an ACP sandbox execution target.

Searched open timeout and metadata issues and PRs. Related #14804
exposes timeout configuration in forms; #14496 proposes a default
policy; #14833 addresses CLI session retention. This PR changes only ACP
result metadata.

## What Changed

- Retain the resolved timeout in the ACP result after settlement.
- Use validated adapter resolution when merging terminal timeout
metadata. Preserve config fallbacks for older adapters and the HTTP
millisecond policy.
- Test sandbox defaults, explicit and fractional limits, explicit
unlimited overrides, local defaults, malformed metadata, and unchanged
cancellation fields.
- Document the result fields and their meaning.

## Verification

- `pnpm -r typecheck` passed.
- `pnpm build` passed.
- Stop metadata tests: 23 passed.
- Reporter and diagnostic suites: 84 passed; two real-Sentry-SDK tests
skipped because the optional SDK is not installed.
- ACP engine suite: all 206 tests passed with a deterministic local
`gemini --version` shim. Ambient host CLI probes made the existing
Gemini session-resume fixture intermittent (one assertion failure in
each of two broad runs); an isolated 15-case rerun and the clean-base
206-test suite also passed. No assertion or timeout was changed.
- `pnpm test:run` is in progress. This PR does not claim a complete
local suite pass.
- Independent review found no blocking issues. The tests cover real
adapter emission and the real metadata merge separately.

## Risks

Low runtime risk: this changes result diagnostics. It does not change
timeout values, cancellation acknowledgement, cleanup, checkpoint
safety, retries, or provider operations. It does not fix the cause of a
quiet or long-running tool. Older stored results are not rewritten. The
new source values apply only when an adapter returns a valid resolution.

## Model Used

OpenAI GPT-6 with reasoning, repository inspection, code editing, and
test execution. The deployment-specific model ID and context-window size
are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [ ] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 16:09:36 -07:00
DottaandPaperclip 862a5758ba fix(agents): reduce hiring templates to role descriptions (#14985)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for work.
> - New agents receive role instructions from onboarding, the hiring skill, or a team package.
> - These sources repeat harness procedures and impose generic work policies.
> - They can crowd out the task and the harness instructions.
> - This pull request reduces those sources to short role descriptions.
> - It preserves configuration, skills, authentication, reporting lines, and approval controls.
> - The benefit is less repeated instruction text with explicit coverage for the default hiring path.

## Linked Issues or Issue Description

Refs #3307. The CEO template can impose a fixed delegation route instead of letting the agent choose how to fulfill the request. This change removes that route. It does not implement autonomous goal selection.

Related work: #14920 preserves stock Codex base instructions. #14948 reduces the generic manual and shared runtime prompts. #14961 improves native completion-tool descriptions. This PR is separate from those changes.

## What Changed

- Select only the short CEO `AGENTS.md` for new default CEO bundles. Keep the three former companion files as compatibility assets.
- Reduce the first-agent chief-of-staff prompt and coder, QA, UX, and security role examples.
- Reduce seven bundled team role bodies. Preserve their role, reporting, and skill metadata. Regenerate the catalog.
- Make hiring examples optional. Replace the long generic role manual with short role drafting guidance. Preserve explicit requester instructions.
- Add configuration and import coverage for native and legacy managed bundles, custom instructions, first-agent rendering, and catalog contents.
- Add an explicit-only hiring eval that starts from the production CEO default and checks one coder hire, independently computed JSON output, saved instructions, and worker reuse.
- Include the full prompt comparison and a separate three-request drafting simulation. Neither is a live provider comparison.

Prompt differences: [before and after](doc/plans/2026-10-02-hiring-template-prompt-diff.md). The CEO default falls from 1,897 to 20 words. The coder example falls from 652 to 18 words. Word counts describe instruction size, not outcome quality or billing.

## Verification

- PASS: 99 focused server tests and eight shipped-catalog tests.
- PASS: catalog generation and validation for four shipped teams.
- PASS: hiring skill validation.
- PASS: `pnpm -r typecheck`.
- PASS: `pnpm build`.
- INCOMPLETE: the full local `pnpm test:run` was stopped before rebase. Its original log is retained. This is not a completed full-suite pass. The full current-head GitHub CI workflow passed: https://github.com/paperclipai/paperclip/actions/runs/37073372419.
- PASS: `pnpm test:e2e:runner:typecheck` and `pnpm test:e2e:runner:unit` (63 files / 843 tests).
- PASS: discovery for the two new hiring cells, 50 existing everyday cells, and the full 438-cell catalog.
- PASS after rebase: 99 server tests, 11 catalog tests, 62 selected E2E support tests, and the E2E typecheck.
- PASS: all current-head PR checks at `57dcee147ed0b2d2e3cc657cd9e50fb16bf9ec25`: 51 successful check runs, two intentional Storybook skips, and successful Snyk status. Fresh Greptile is 5/5 with zero unresolved threads.
- PENDING follow-up: matched live hiring runs on frozen integration refs. No live outcome-quality or non-regression result is claimed from the configuration checks or this merge.

The new suite has two local native cells: Codex and ACPX Claude. It expects five provider turns per cell. It compares source-derived bundles, so the historical long templates remain admissible. Missing successful source-read receipts make a pair uncomparable. They do not establish a behavior regression or equivalence.

## Risks

- New default roles have fewer prescribed procedures. Live checks must determine whether a removed instruction was needed for an outcome.
- Existing custom and saved bundles keep their contents. The retained companion assets avoid a source-file compatibility break.
- Specialized Summarizer, Reflection Coach, and Wiki Maintainer prompts remain unchanged. Their product contracts need separate review.
- The generic non-CEO fallback reduction is in #14948. This PR alone does not provide its eight-word fallback.
- Configuration tests and drafting simulations do not establish live outcome quality. QA, UX, security, and chief-of-staff hiring behavior remain outside the new two-cell comparison.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`.

## Model Used

OpenAI Codex, based on GPT-6, with reasoning, code editing, shell tools, and delegated verification. The runtime does not expose the exact deployment model ID or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context to this change
- [x] I have specified the model used (with version and capability details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template
- [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before requesting merge

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-02 17:56:42 -05:00
Devin FoleyandPaperclip 22cea6b2e6 fix: bound sandbox bridge waits and flag silent runs sooner (#14979)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Sandbox agents exchange input and output through bridge control
commands.
> - A provider can stop responding to a command even when it receives a
timeout.
> - These small commands can inherit a four-hour agent lifetime and
block input or teardown.
> - The board also calls a silent run healthy for the first hour.
> - This pull request bounds bridge control waits and surfaces silence
sooner.

## Linked Issues or Issue Description

**What happened?**

A sandbox run can remain active when a bridge control command never
returns. The shared helper passes a timeout to the provider but does not
enforce it on the host. It also accepts the agent's hours-long timeout.
Output silence remains `ok` for an hour and becomes `critical` only
after four hours.

**Expected behavior**

Bound short bridge operations even if the provider never settles. Report
failed input delivery through the existing shutdown path. Warn after
five silent minutes and escalate after fifteen. Keep normal agent
command limits and require verified termination before releasing
execution ownership.

**Steps to reproduce**

1. Use a sandbox runner whose bridge read or input-upload promise never
settles.
2. Set its configured timeout to four hours.
3. Observe that the old queue client never returns or rejects.
4. Inspect a running task with 35 minutes of output silence. The old
summary still reports `ok`.

**Paperclip version or commit**

Base commit `d6d88b9de2`.

**Deployment mode**

Self-hosted server with sandbox execution.

**Agent adapter(s) involved**

Shared command-managed sandbox bridge, including Codex ACP sessions. The
informational silence thresholds apply to active runs across adapters.

Related: #14889 recovers stalled Daytona output streams; #14485 retries
explicit gateway failures during input delivery. This change bounds
short control operations whose provider promises never settle. It does
not add tool replay or automatic cancellation for output silence. #6297
proposes configurable per-agent silence thresholds; this patch only
changes the existing defaults.

## What Changed

- Enforce at most 30 seconds per bridge control shell command on the
host and provider, including callback startup and shutdown,
process-session launch, and payload setup. Preserve shorter configured
deadlines and launch environments.
- Keep the long-lived agent command outside this deadline. Use a fixed
timeout diagnostic without command payloads.
- Surface suspicious output silence after five minutes and critical
silence after fifteen minutes.
- Decouple the shared-workspace holder cutoff from warning thresholds
and preserve its existing one-hour value.
- Add regressions for hung reads, a late upload response, failed input
delivery, exact warning boundaries, and fresh output clearing warnings.
- Update the adapter guide and execution contract.

## Verification

- The three new queue-client regressions fail on the unchanged base and
pass with this patch.
- Final callback bridge and sandbox session suites: 214 passed. These
cover hung reads, writes, startup, shutdown, process-session launch,
payload setup, and the separate long-running agent limit.
- Stdin ordering and shutdown suite: 56 passed after the lifecycle
change.
- Daytona and watchdog coverage passed in the earlier focused runs.
Across the focused suites, 602 distinct tests pass.
- `pnpm -r typecheck` and `pnpm build`: passed. Server and adapter
typecheck/build also passed after their respective follow-up changes.
- `pnpm test:run`: attempted and stopped after known local failures.
Four chat/email cases used an external ancestor skill path, three
skill-cache cases failed on macOS, and one wakeup case timed out. The
wakeup case passes alone (1 passed, 27 skipped). This run spanned the
workspace-cutoff follow-up and also failed its new holder case; a fresh
final-head workspace suite passes all 19 tests. The interrupted run is
not a full local-suite pass or final-head verification.
- A filesystem queue-drain test failed once during the lifecycle rerun
and passed on the complete two-suite rerun. It uses the filesystem
client, outside the changed command-runner path.
- Complete CI on `ff2212c235`: 53 successful checks and two expected
skips, including the full test suite and canary packaging dry run. No
failed or pending checks.
- Greptile reviewed `ff2212c235` at 5/5. All review findings are
addressed, no threads remain unresolved, and the branch has no merge
conflicts with `master`.
- `git diff --check` and a scan of added text for secrets and private
identifiers passed.

## Risks

- A bridge control operation that needs more than 30 seconds now fails,
even if the caller selected a longer run lifetime. Agent commands retain
their own limits.
- Timing out a provider promise does not cancel the remote operation or
prove it stopped. Existing execution settlement still owns termination
verification. No uncertain tool action is replayed.
- Quiet healthy runs display warnings sooner. Existing snooze, continue,
and false-positive dismissal controls still apply. Silence alone does
not cancel a run, create review work, or change assignments.
- No schema or API shape change.

## Model Used

OpenAI GPT-6 through Codex, with tool use and code execution. The exact
serving model ID and context window are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run change-specific tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 15:29:41 -07:00
Devin FoleyandPaperclip 5b8b2b38ca feat(apps): add Neon connection (#14980)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Agents reach external services through the Apps catalog. Each
catalog entry is a reviewed `AppDefinition` that wires a provider's
hosted MCP server into Paperclip's shared vault, grants, policies,
gateway, and audit trail.
> - Neon is a widely used serverless Postgres provider with an official
hosted MCP server, but it is not in the catalog. Teams that run their
databases on Neon must use the generic "connect your own MCP server"
path, which has no branding, no guidance, and no project or read-only
controls.
> - The connector playbook requires a catalog entry for a provider like
this: the hosted server supports dynamic client registration and bearer
API keys, and the common definition fields can express every option
Paperclip can serialize.
> - This pull request adds the Neon definition, its official artwork,
the research and permission-review ledger rows, documentation, and
deterministic tests, without any provider-specific runtime code.
> - The benefit is a one-click, governed Neon connection with optional
project pinning and read-only mode, and a documented path to live
qualification.

## Linked Issues or Issue Description

**Problem or motivation**

Neon is a common Postgres host for the applications agents work on, but
Paperclip's Apps catalog has no Neon entry. Operators who want agents to
inspect schemas, run SQL, or manage branches must paste the MCP URL into
the generic remote-MCP flow, which gives no branding, no provider
guidance, no project boundary, and no read-only switch.

**Proposed solution**

Add a catalog-only Neon connection built from the connector playbook:
browser sign-in through Neon's dynamic client registration with the
reviewed `read` and `write` scopes, or a customer API key sent as an
Authorization bearer header. Both methods expose Neon's documented
`projectId` pin and `readonly` switch as optional Advanced fields. Every
discovered tool stays governed by the normal per-action policies.

**Alternatives considered**

A plugin was not needed because no custom UI, tables, workers, or
webhooks are involved. A separate read-only method was not added because
the playbook treats read-only switches as advanced fields rather than
methods. Neon's repeatable `category` query filter was left out because
tenant fields serialize lists as one comma-joined value, so it cannot be
sent correctly without new runtime code; per-action policies cover
catalog narrowing instead.

**Roadmap alignment**

This extends the existing self-serve remote-MCP connection catalog and
does not overlap planned core work.

## What Changed

- Added the `neon` provider to `scripts/ingest-app-definitions.mjs`
(category, API-key placement, methods, tenant fields, guidance,
warnings) and regenerated
`packages/shared/src/app-definitions/neon.json` plus the generated
registry.
- Added the Neon row to the self-serve MCP research ledger with
`dcr_or_api_key` auth and risk tier S4.
- Added permission reviews for `neon/mcp-oauth` (explicit scopes `read`,
`write`, taken from Neon's live authorization-server metadata) and
`neon/mcp-api-key` (provider key), with evidence links.
- Added Neon's official tile icon (`ui/public/brands/apps/neon.png`,
copied byte-for-byte from the icon linked by neon.com) and the brand
manifest entry.
- Added prosumer gallery copy for the Neon card.
- Added `doc/connections/NEON.md` (service involvement, endpoints,
administrator setup, capabilities and policy, manifest, brand
provenance, validation hook) and linked it from the connections README
and the permission audit.
- Tests: Neon definition shape, store visibility and artwork, URL
recognition, reviewed scopes with scope-widening rejection, URL
projection of the project pin and read-only flag, invalid project ID
rejection, the connect form's API-key gating, and the pinned catalog
counts.

## Verification

- `pnpm exec vitest run packages/shared/src/app-definitions.test.ts
packages/shared/src/app-definitions-url.test.ts` — 34 passed.
- `pnpm exec vitest run
server/src/__tests__/tool-access-service.test.ts` — 367 passed.
- `pnpm exec vitest run ui/src/pages/apps/AppsConnect.test.tsx
ui/src/pages/apps/Browse.test.tsx ui/src/lib/app-brand-assets.test.ts
ui/src/pages/apps/AppLogo.brand-assets.test.tsx` — all passed.
- `node scripts/check-app-brand-assets.mjs` and `node --test
scripts/app-brand-validation.test.mjs` — passed.
- `pnpm --filter @paperclipai/shared typecheck`, `pnpm --filter
@paperclipai/server typecheck`, `pnpm --filter @paperclipai/ui
typecheck`, `pnpm check:token-gates` — clean.
- Manual: in a local instance, open Apps → Browse, confirm the Neon card
and icon, open `/apps/connect?source=neon`, confirm both methods, the
Advanced project pin and read-only toggle, and that Connect enables
after an API key is entered. The operator completed a live connection
against a Neon account on this build.
- Live metadata probed on 2026-10-02: both `.well-known` documents at
`mcp.neon.tech` return the recorded endpoints and scopes; an
unauthenticated `initialize` returns 401 with `resource_metadata`.

## Risks

- Low risk to existing providers: the change is additive catalog data
plus tests. The generated registry only gains one import.
- Neon's hosted server grants broad project and database management. The
definition carries two warnings, recommends a development project, and
keeps every write under the normal action policies; the read-only switch
is enforced by Neon's server, not locally.
- The permission-review ledger records live proof for both methods as
not run; the full lifecycle checklist in `doc/connections/NEON.md` still
needs a documented pass before the entry is considered fully qualified.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- Claude Fable 5.1 (`claude-fable-5-1`) in Claude Code, with extended
thinking and tool use (shell, file editing, browser verification).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 15:04:52 -07:00
abderrahmen bejaouiandabderbj d9b64ee28e fix(codex-local): order Codex models the way the ChatGPT app does (stacked on #14917) (#14918)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Each agent runs on an adapter, and the operator picks the agent's
model from the list the adapter advertises.
> - The `codex_local` adapter advertises a static, curated list. The
server returns that list as written, but the list itself is not in a
useful order: the default `gpt-5.6-sol` sits above the whole GPT-6
family (#14878).
> - This pull request orders the list the way the ChatGPT app orders
Codex models: newest model version first, then by decreasing capability
inside each version, with older models at the end.
> - It is stacked on #14917, which makes the model dropdown show a
hand-ordered list as the adapter advertises it. Without that change the
picker shows every list alphabetically.
> - The benefit is that a user who knows Codex finds the right model at
once, and older models sit at the end of the list.

## Linked Issues or Issue Description

Fixes #14878.

Related: #14917 (the Claude counterpart, #14877) carries the dropdown
change this PR relies on. This PR contains that commit until #14917
lands; after that it rebases to the Codex commit alone.

## What Changed

- `packages/adapters/codex-local/src/index.ts`: reorder the advertised
`models` list. GPT-6 (`astra`, `sol`, `luna`) first, then GPT-5.6
(`sol`, `terra`, `luna`), then `gpt-5.5`, `gpt-5.4`, `gpt-5.4-mini`,
`gpt-5`, `gpt-5-mini`, `gpt-5-nano`, then the o-series and
`codex-mini-latest` in their existing relative order.
`DEFAULT_CODEX_LOCAL_MODEL` is unchanged.
- `packages/adapters/codex-local/src/index.test.ts`: the metadata test
now asserts the full order of the GPT entries.

The ChatGPT app also lists GPT-6.1 Sol first. That model is not in
Paperclip's list today. Adding a model needs reasoning-effort and
fast-mode entries as well, so it is out of scope for an ordering fix.

## Verification

Run from the repository root:

```sh
pnpm exec vitest run packages/adapters/codex-local server/src/__tests__/adapter-models.test.ts
pnpm --filter @paperclipai/adapter-codex-local typecheck
```

Red on `master`, green here: the updated metadata test fails against the
unmodified list because `gpt-5.6-sol` comes first.

Manual check: open an agent that uses `codex_local` and open the model
dropdown. The list reads gpt-6-astra, gpt-6-sol, gpt-6-luna,
gpt-5.6-sol, gpt-5.6-terra, gpt-5.6-luna, gpt-5.5, gpt-5.4,
gpt-5.4-mini, gpt-5, gpt-5-mini, gpt-5-nano, o3, o4-mini, o3-mini, Codex
Mini.

## Risks

- Low risk. The list content and the default model do not change; only
the order does. The server returns this list as-is for the built-in
Codex adapter and the server test compares against the exported list, so
no server change is needed.
- The first entry is no longer the default model. Nothing reads the
first entry as a default: `DEFAULT_CODEX_LOCAL_MODEL` is resolved
separately.

## Model Used

Anthropic Claude Fable 5.1 (`claude-fable-5-1`) through Claude Code,
extended thinking on, with tool use for reading the repository, running
vitest and tsc, and editing files. The account holder reviewed the
change and owns the commit.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: abderbj <115119179+abderbj@users.noreply.github.com>
2026-10-02 13:32:18 -07:00
abderrahmen bejaouiandabderbj 92ad158ce1 fix(claude-local): order Claude models the way the Claude app does (#14917)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Each agent runs on an adapter, and the operator picks the agent's
model from a list the adapter advertises.
> - The `claude_local` adapter advertises a static list and merges in
the models the Anthropic API returns. Neither list has a deliberate
order.
> - The model dropdown then sorts every list by id. For Claude this
shows "Fable 5", "Fable 5.1", "Haiku 4.5", "Mythos 5", "Opus 4.6" ...
which is not the order of capability, release, or version (#14877).
> - This pull request gives the adapter one defined order, the one the
Claude app uses: the newest release of each family first, by decreasing
capability, then older releases grouped by family. The server applies it
to discovered models, and the dropdown keeps the adapter's order instead
of re-sorting.
> - The benefit is that a user who knows the Claude app finds the right
model at once, and older models sit at the end of the list.

## Linked Issues or Issue Description

Fixes #14877.

Related: #14147 touches the same adapter's model list (the
`ANTHROPIC_MODEL` default label) and does not change ordering. #14878 is
the Codex counterpart and depends on the dropdown change in this PR.

## What Changed

- `packages/adapters/claude-local/src/server/model-order.ts` (new):
`sortClaudeModels()` and `parseClaudeModelId()`. The parser reads the
current scheme (`claude-opus-4-8`), the legacy scheme
(`claude-3-7-sonnet-20250219`), dated snapshots, `-latest` aliases, the
`[1m]` suffix, and Bedrock ids (`us.anthropic.…-v1`, `…-v2:0`). The sort
puts the newest release of each family first (Fable, Mythos, Opus,
Sonnet, Haiku), then older releases grouped by family with versions
descending. An alias sorts before its dated snapshots, and dated
snapshots of one release sort newest first. Ids that are not Claude
models keep their incoming order at the end.
- `packages/adapters/claude-local/src/server/models.ts`: apply the order
to the static fallback, to the merged API list, and to the Bedrock list.
Reorder `BEDROCK_MODELS` to match.
- `packages/adapters/claude-local/src/index.ts`: reorder the advertised
`models` list to the same order.
- `ui/src/components/AgentConfigForm.tsx`: `ModelDropdown` gets a
`preserveOrder` prop. With it the dropdown shows the list as the adapter
ordered it; without it the list is sorted by id as before.
`ui/src/lib/model-utils.ts` adds `adapterCuratesModelOrder()`, true for
the built-in adapters whose list arrives in a deliberate order
(`claude_local`, `codex_local`, `paperclip_runner`, `gemini_local`,
`grok_local`, `kimi_local`, `openclaw_gateway`, and `opencode_local` /
`pi_local`, which the server sorts when discovered and which lead with
the default model when it falls back to the declared list). Cursor is
not in the set because its list comes from `agent models` discovery, and
adapters not named there, including externally installed ones, keep the
alphabetical fallback. The three dropdown call sites (`AgentConfigForm`,
`ConfigureBuiltInAgentModal`, `NewAgentSetup`) pass it; `NewAgentSetup`
decides by the resolved brand type, because a `paperclip_runner` agent
fetches the Claude or Codex list for its brand. Grouped lists
(`opencode_local`, `pi_local`) are unchanged.
- Tests: `model-order.test.ts` (adapter, including the snapshot-date
tie-breaker), `ModelDropdown.test.tsx` (ui: preserved order with the
prop, alphabetical without it, provider groups unchanged),
`model-utils.test.ts` (which adapters opt in), and two updated
expectations plus one new order assertion in
`server/src/__tests__/adapter-models.test.ts`.

Mythos is not in the Claude app's list. This PR ranks it directly after
Fable, in the top capability tier. The rank table in `model-order.ts` is
one line to change if you prefer a different slot.

## Verification

Run from the repository root:

```sh
pnpm exec vitest run packages/adapters/claude-local server/src/__tests__/adapter-models.test.ts ui/src/lib/model-utils.test.ts ui/src/components/ModelDropdown.test.tsx ui/src/components/AgentConfigForm.render.test.tsx ui/src/components/ConfigureBuiltInAgentModal.test.tsx ui/src/pages/NewAgent.test.tsx
pnpm --filter @paperclipai/adapter-claude-local typecheck
pnpm --filter @paperclipai/ui typecheck
pnpm --filter @paperclipai/server typecheck
pnpm check:module-boundaries && pnpm check:token-gates && pnpm check:tokens
```

Red on `master`, green here:

- `ModelDropdown.test.tsx` fails against the unmodified dropdown because
the ids come back sorted alphabetically even with `preserveOrder`.
- `adapter-models.test.ts` fails against the unmodified adapter because
the first model is `claude-opus-4-8`, not `claude-fable-5-1`.

Manual check: open an agent that uses `claude_local`, open the model
dropdown. With no `ANTHROPIC_API_KEY` the list reads Fable 5.1, Mythos
5, Opus 5.5, Sonnet 5, Haiku 4.5, Fable 5, Opus 5, Opus 4.8, Opus 4.7,
Opus 4.6, Sonnet 4.6, Sonnet 4.5. With a key, the discovered models slot
into the same order.

## Risks

- The other built-in adapters in the set (Gemini with `Auto` first,
Grok, Kimi, OpenClaw, the runner's Codex list, and the OpenCode and Pi
lists in the built-in-agent modal) are now shown as their adapter
delivers them instead of alphabetized. Cursor's discovered list and
every adapter outside the set, including externally installed ones, keep
the alphabetical order they had, so no option moves between refreshes.
Grouped lists are unchanged.
- The first entry of the Claude list changes from Opus 4.8 to Fable 5.1.
Nothing reads the first entry as a default: `DEFAULT_CLAUDE_LOCAL_MODEL`
is `claude-opus-5` and is resolved separately.
- No API, schema, or migration change.

## Model Used

Anthropic Claude Fable 5.1 (`claude-fable-5-1`) through Claude Code,
extended thinking on, with tool use for reading the repository, running
vitest and tsc, and editing files. The account holder reviewed the
change and owns the commit.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: abderbj <115119179+abderbj@users.noreply.github.com>
2026-10-02 13:24:04 -07:00
DottaandPaperclip 2ec82c5774 fix(runner): preserve task context when tool connections change (#14963)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Agents use tools through company-scoped connections and provider
sessions.
> - Resolving a tool connection currently forces a fresh session even
when the provider can load new tools into the existing conversation.
> - A fresh provider conversation can receive too little history to
continue the task.
> - This pull request adds explicit tool-refresh capabilities and uses
them in both runner paths.
> - Fresh attempts receive bounded task history with source IDs and
retrieval instructions.
> - The benefit is that agents can continue the same task after a
connection changes.

## Linked Issues or Issue Description

**What happened?**

A resolved tool connection forced a fresh provider conversation. The new
conversation could lose the original goal and prior answers. Claude also
rejected resume when only the MCP server set changed.

**Expected behavior**

Resume the provider conversation when its harness can refresh tools.
When a fresh session is required, supply enough bounded history to
continue the task. Preserve company, agent, task, workspace, model,
instruction, and skill checks.

**Steps to reproduce**

1. Start a conversation and agree on a task and its constraints.
2. Request and connect a tool needed for the task.
3. Continue the conversation after the connection resolves.
4. Check that the agent remembers the task and can use the new tool.

**Paperclip version or commit**

The bug was reproduced on master at `c46e41e81`. This branch is rebased
on current master.

**Deployment mode**

Self-hosted server. Both legacy adapters and the native runner are
affected.

Related public work: Refs #13282 for task-backed conversations. Refs
#13057 for the broader session-compaction proposal. Refs #14659 for
another report about local CLI session continuity. This change fixes
tool-connection continuation. Provider authentication repairs keep their
existing recovery behavior.

## What Changed

- Expose tool-refresh support in native harness descriptors and legacy
adapter metadata.
- Request tool refresh after connection resolution. Keep provider
authentication repair as a fresh-session wake.
- Reload current tools and credentials while retaining supported Claude,
Codex, Grok, and other provider conversations.
- Allow MCP-only changes during qualified native recovery. Keep all
other compatibility checks.
- Refresh managed-provider and ACPX tool bindings when attaching a new
run.
- Add a fresh-session handoff for both runner paths. Bound database
reads, excerpts, and the final packet to 24,000 bytes.
- Include the original request, recent messages, decisions, plans, prior
answers, and source IDs. Mark omitted content. Apply reset boundaries,
wake cutoffs, quarantine, and secret redaction.
- Add regression tests and document the capabilities and handoff
behavior.

## Verification

- `pnpm -r typecheck` and `pnpm build` passed. Rust formatting passed.
- Final review fixes passed 314 server tests, 333 adapter utility tests,
139 native-session runtime tests, and 12 managed-provider Rust tests.
They verify historical quarantine, raised budgets across attachment, no
history reads on successful resume, and handoff delivery on fresh retry.
- Broader branch verification also passed 1,401 adapter utility tests,
1,047 runner TypeScript tests, 43 Grok adapter tests, and 311 Rust core
tests.
- Live Claude CLI and Grok ACP probes preserved the provider session ID,
recalled a prior task constraint, and called a newly added read-only MCP
tool.
- GitHub CI passed on `b21486d18084a7aa4cafbe8e012f7cad6585d9cc`: 55
successful checks and 4 skipped checks. This includes all test shards,
all eight browser shards, runner checks, and the Grok clean public npm
install canary. [CI
run](https://github.com/paperclipai/paperclip/actions/runs/37057514976).
- A full local test attempt encountered a separate Git snapshot timeout.
All affected local suites passed after the final edits, and the full CI
test gates passed.
- Review the capability matrix in `packages/paperclip-runner/README.md`.
Repeat the four reproduction steps with a supported provider and with an
unsupported harness.

## Risks

- Provider tool refresh can fail. Existing recovery falls back to a
fresh conversation where policy permits it.
- A new transport can replace an old process while preserving the
provider conversation. Tests cover current credentials and unchanged
identity.
- Long history can omit older context. Explicit markers and source IDs
let the agent retrieve needed context within task scope.
- Unknown and unqualified harnesses use the fresh-session path. No
database migration is required.

## Model Used

OpenAI Codex, GPT-6, with reasoning, tool use, code execution, and live
provider testing. The exact model ID and context-window size are not
exposed in this session. Claude and Grok also ran as test subjects.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 15:11:44 -05:00
Devin FoleyandPaperclip 144083fd48 fix(interactions): wait for workspace readiness before enabling approval (#14893)
## Thinking Path

> - Paperclip lets people manage AI agents and review their work.
> - Task confirmations must use the work produced by their source run.
> - The server blocks approval while that run still needs to sync its
workspace.
> - The card currently enables approval before that check can pass, so
an ordinary click produces an error.
> - This PR exposes the existing readiness check and shows “Preparing
approval…” with acceptance disabled.
> - The card refreshes itself and enables approval when the source
workspace settles.

## Linked Issues or Issue Description

**What happened?**

A confirmation appears while its source run is still preparing or
syncing its workspace. Its enabled approval button returns a conflict
asking the user to retry after syncing.

**Steps to reproduce**

1. Run an agent in an isolated workspace.
2. Have it create a confirmation before workspace finalization
completes.
3. Click the approval button while the source workspace is still active.

**Expected behavior**

The card explains that approval is preparing. Acceptance becomes
available automatically when the same server check permits it. Reject
and revise remain available.

Related work: #10770 handles this conflict after a click with retries.
#9520 proposes changing the workspace acceptance barrier. This PR
preserves that barrier and exposes readiness before the click, including
in compact task chat. It preserves the terminal-finalize behavior from
#10099.

## What Changed

- Add an optional, read-only `acceptanceBlocker` to interaction
responses. Readiness uses the existing source-run workspace predicate,
with one check per pending source run.
- Disable acceptance and show a shared preparation notice in classic and
compact confirmation cards, including checkbox and secret-binding
confirmations.
- Refresh preparing cards every two seconds in task detail, attention,
pipelines, and Skill Studio. Restore each surface's previous polling
cadence when preparation clears.
- Preserve live tool reviews, questions, rejection, revision, and the
server acceptance barrier. No automatic acceptance occurs.
- Document the preparation state and cover readiness, terminal sync
outcomes, unrelated runs, historical cards, and automatic refresh.

## Verification

- Focused service, card, query-refresh, and helper tests: 217 passed
across five files.
- `pnpm -r typecheck`: passed.
- `pnpm build`: passed.
- `pnpm build-storybook`: passed.
- `pnpm check:token-gates`: passed.
- `pnpm test:run`: incomplete locally. Stopped after about 17 minutes
once it reproduced seven existing environment failures: two Slack tests
and two email tests lack ancestor-directory skill fixtures; three
company-skills tests fail on macOS runtime-cache staging permissions.
These are outside this change. The full CI test matrix passed.
- CI: all 53 checks passed; two optional Storybook jobs were skipped.
The branch has no conflicts with `master`.
- Greptile: 5/5 on commit `8a6f216d8d`, with no review threads.
- Reviewed added lines and new files for credentials, private URLs,
internal task references, user paths, and run artifacts. None found.

## Risks

- No database migration or change to acceptance authorization. Readiness
is advisory; the server still enforces its existing gate at acceptance.
- An open preparing card adds a read every two seconds. This cadence
stops after readiness clears; historical cards add no workspace checks.
- Failed or stale finalization retains the existing server behavior.
This PR does not change recovery policy.

## Model Used

OpenAI GPT-6 through Codex. The exact serving model ID and
context-window size are not exposed in this session. Used reasoning,
repository inspection, tool execution, and automated tests. No
sub-agents.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass (217 focused tests; full
local-suite limitations are recorded above)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 13:08:25 -07:00
DottaandPaperclip d034ba7491 fix(interactions): derive question storage from canonical forms (#14946)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Agents request human input through durable issue interactions.
> - A question form has a canonical presentation and a compatibility
storage format.
> - The creation API required agents to write both formats.
> - Tool guidance told agents to split text and choice questions across
those formats.
> - This pull request accepts one complete canonical form and derives
storage fields on the server.
> - The benefit is a complete question card with stable answer and retry
behavior.

## Linked Issues or Issue Description

Related work: Refs #13630 and #14430. PR #13630 addresses the display of
historical partial forms. This change fixes creation and keeps the check
that rejects conflicting new forms.

**What happened?**

A question save supplied three compatibility questions and one canonical
text question. The API correctly rejected the incomplete canonical form.
The Runner's tool description encouraged this split. Sending only a
complete canonical form also failed because the API required
compatibility questions.

**Expected behavior**

An agent sends one complete `payload.questionSet` with every text and
choice question. Paperclip derives `payload.questions` for storage and
answer compatibility. Existing legacy requests remain valid. Explicitly
conflicting dual forms remain invalid.

**Steps to reproduce**

1. Call `paperclip_request_human_input` with `interactionKind:
"questions"`.
2. Send `payload: { version: 1, questionSet: ... }` with a required text
question and a required choice question.
3. The old API rejects the missing compatibility questions. With this
change, it stores both questions and preserves the canonical form.
4. Retry with the same idempotency key. Confirm that only one
interaction exists.
5. Submit both answers. Confirm that the normal resolver and
continuation rules apply.

**Paperclip version or commit**

The branch is based on `cf8ad63c8`. The problem affects the native
Runner and the interaction creation API.

**Deployment mode**

Server deployment with the native Paperclip Runner. Integration tests
use the real interaction service and an embedded test database.

## What Changed

- Add one shared canonical-to-storage projection. Reuse it for native
harness question requests.
- Accept canonical-only question creation at the shared validator and
server boundary.
- Export the input type and update the plugin SDK and its RPC contract.
- Advertise a typed, complete question form in the live and scenario
tool schemas.
- Enforce canonical text and custom-answer constraints before ordinary
or native resolution. Preserve harmless display whitespace.
- Run regex matching in isolated workers with a deadline and resource
limits. Both answer paths await the result before persistence. Saved
native delivery uses the validated answer without taking another worker
slot.
- Update agent guidance and generated Runner contracts.
- Test mixed forms, option-ID collisions, retries, answers, legacy
requests, and conflicting forms.

## Verification

- Interaction service, HTTP route, native bridge, and Runner authority
suites: 221 tests passed after correcting an obsolete tool-description
assertion.
- Shared validator, plugin SDK, CLI, and UI compatibility suites: 67
tests passed.
- Runner core tool-contract suite: 20 tests passed. AJV validates live
and scenario schemas.
- Final review regressions: 172 shared, service, native bridge, and
authority tests passed. These cover text length, pattern, numeric
limits, whitespace, custom option IDs, and historical pending cards.
- Runner session suites: 67 tests passed. Published example tests: 4
tests passed.
- Server typecheck and the shared/server builds passed after the
compatibility fixes.
- Final delivery verification: 35 response-delivery tests passed. The
native delivery regression proves saved answers do not enter pattern
workers; server typecheck and build passed.
- Pattern security and answer-flow verification: 205 tests passed after
repairing the child fixture loader. These cover pathological matching,
event-loop responsiveness, worker concurrency, slot cleanup, HTTP
routes, native delivery, and the full helper in a child process.
- `pnpm -r typecheck` passed on the bounded-worker revision.
- `pnpm build` passed on the bounded-worker revision.
- All 55 GitHub checks passed on `fe457af`; four optional jobs were
skipped. An unchanged Cursor adapter test timed out once in CI, passed
locally, and passed on one failed-job rerun.
- Reviewers can send the canonical-only mixed form above and verify that
the saved interaction contains both canonical and compatibility
questions.

## Risks

- The creation API accepts a new input shape. Stored rows and answer
contracts keep the existing shape.
- The shared projection must preserve synthetic free-text option IDs.
Collision and native round-trip tests cover this behavior.
- Historical partial rows remain readable. New conflicting dual forms,
including written-answer mismatches, remain rejected.
- Existing pending cards retain the written-answer paths offered by
their stored options. Canonical text constraints still apply.
- Ordinary answers now enforce declared canonical constraints before
persistence. Invalid answers leave the card pending.
- Regex validation has a one-second deadline and a four-worker capacity
limit. A complex pattern or capacity error leaves the card pending with
a validation error.
- No database migration or change to company authorization is required.

## Model Used

- OpenAI GPT-6 through Codex. The session exposes the GPT-6 model
family; its exact runtime model identifier and context window size are
not exposed. Used reasoning, tool use, and code execution.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 14:21:11 -05:00
DottaandPaperclip 9786f6df56 fix(runner): preserve credential content in document saves (#14937)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The Runner sends authorized tool calls to the control plane.
> - Agents use these calls to save plans and instruction files.
> - The Runner used diagnostic secret detection to reject execution
arguments.
> - Ordinary credential-related prose could reject a document save
before persistence.
> - This pull request forwards the original arguments and leaves
credential policy to the provider harness.
> - The benefit is reliable saves with useful diagnostic records.

## Linked Issues or Issue Description

Related foundation: Refs #12415 and #14430. No duplicate save-policy fix
was found.

**What happened?**

A `write_document` call failed before the server saved its plan. The
Runner reported `semantic tool input contains credential material;
refusing to execute altered arguments`. The detector also masked
ordinary phrases such as `secret manager` and `credential handling` in
diagnostics. Both TypeScript dispatchers had equivalent execution gates.
One dispatcher also rewrote structured approval and question payloads
before execution.

**Expected behavior**

Paperclip forwards authorized arguments unchanged. The provider harness
decides credential-content policy. Log and audit redaction does not
reject or rewrite save input.

**Steps to reproduce**

1. Send an authorized `write_document` call with a plan that discusses
credential handling.
2. Include an intentional credential value in the body to exercise
harness-owned policy.
3. The old Runner rejects the call. With this change, the document
service stores the exact body.
4. Diagnostic records still mask explicit credential values. Qualified
credential fields, short bearer values, opaque diagnostic pairs, and
valid encoded JSON token headers have regression coverage.

**Paperclip version or commit**

Reproduced at `c46e41e81c03cd3c8b64cf993615b604d7fe8c62`. The branch is
based on current `master`.

**Deployment mode**

Server deployment with the native Paperclip Runner. Local regression
tests use the real document service and an embedded test database.

## What Changed

- Remove credential-content vetoes from Rust admission and both
TypeScript semantic dispatchers.
- Preserve original structured approval and question arguments during
execution.
- Keep transport bounds, schema checks, authorization, idempotency, and
audit masking.
- Require explicit credential syntax or recognized formats for
diagnostic masking. Preserve ordinary prose, metadata, and dotted
identifiers.
- Test exact document persistence, replay, nested argument identities,
and masked audit copies.
- Remove obsolete retry guidance and document harness-owned credential
policy.

## Verification

- `cargo test --manifest-path
packages/paperclip-runner/runner/Cargo.toml --locked -p
paperclip-runner-core --lib --test acpx_event_payload --test
acpx_provider_state --test acpx_provider_turns`: 355 tests passed.
- Focused server and adapter tests: 189 tests passed after rebase. These
include the real document save and the complete tool-gateway suite.
- Semantic dispatcher and conformance tests: 34 tests passed.
- Diagnostic redaction and MCP tests: 46 tests passed, including all six
review examples.
- `pnpm -r typecheck` and `pnpm build` passed on the repaired branch.
- The broad local root suite was interrupted after database fixture
setup failures. The focused database suites passed. CI runs the complete
configured test lanes.

## Risks

- Authorized tool arguments can intentionally contain credentials. The
harness must enforce its content policy.
- Diagnostic detection is narrower. Explicit assignments, credential
fields, and recognized credential formats remain masked.
- The change does not add a database migration or change company
authorization.

## Model Used

- OpenAI GPT-6 through Codex. The session exposes the GPT-6 model
family; its exact runtime model identifier and context window size are
not exposed. Used reasoning, tool use, and code execution.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 14:19:41 -05:00
DottaandPaperclip 7a52dcdc74 fix: repair MCP validation and cancelled execution recovery (#14951)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The tool gateway gives agents access to connected services. Recovery
controls what happens when a run stops.
> - Generated tool names can exceed the provider limit after the MCP
client adds its prefix.
> - The same invalid definition can fail each automatic retry. A
cancelled run can also hold saved messages without showing its cause.
> - This pull request bounds tool names, stops configuration retries,
and retains cancellation evidence.
> - It shows the stopped run and admits saved input only after the
existing safety checks pass.
> - The benefit is a clear recovery path that preserves operator Stop
and prevents duplicate message delivery.

## Linked Issues or Issue Description

**What happened?**

A long connected MCP tool name makes the provider reject the entire
request. Automatic recovery repeats the invalid request. Separately,
unexpected legacy cancellations can leave saved input behind a recovery
hold. The notice does not identify the stopped run or its cause.

**Expected behavior**

Complete MCP names fit the provider limit. Tool-definition errors
require configuration repair. Cancelled runs retain their source and
reason. The recovery notice shows the cause and saved-message count.
Verified unexpected cancellations can start a fresh turn through the
existing admission checks.

**Steps to reproduce**

1. Assign an App gallery connection with a long application key and tool
name to a Claude agent.
2. Start a run. The provider rejects a name over 128 characters,
including its MCP prefix.
3. For cancellation recovery, stop a legacy provider turn without an
operator Stop request and send a user message while the recovery hold is
active.
4. Inspect the recovery notice and the deferred message queue.

**Paperclip version or commit**

Rebased onto master at `cf8ad63c806685bfd7c48e3ed4a919d61a7c55f1`.

**Deployment mode**

Hosted or self-hosted server with legacy Claude or Codex execution.

Related public work:

- Refs #14017. That PR caps name segments. This PR preserves existing
short names and uses stable hash aliases for long complete names. It
also covers classification and recovery.
- Refs #4510. That PR adds a cancellation-source column. This PR records
bounded evidence in the existing run result, without a migration.
- Refs #12552 and #4506. Those PRs suppress recovery after operator
cancellation. This PR preserves operator intent and uses the existing
continuation gates.

## What Changed

- Bound gateway names with the full provider prefix in the 128-character
budget. Retain the original upstream tool name for dispatch and
permissions.
- Classify invalid tool definitions as configuration failures before
diagnostic redaction. Stop automatic retries and continuation attempts
for that error code.
- Persist cancellation source, expectedness, initiator, reason, and
time. Preserve recorded Stop intent when adapter results arrive. Report
unexpected started cancellations with closed diagnostic labels.
- Show the run cause, saved-message count, and Inspect run link. Offer
Continue for eligible unexpected cancellations. Require verified
provider stop, empty tool inventory, ownership, and the existing pause,
budget, approval, and dependency gates. Use the existing queue for
single delivery.
- Add regression coverage and update the execution, MCP gateway, and
run-log documentation.

## Verification

- `pnpm -r typecheck` and `pnpm build` passed.
- `pnpm check:token-gates` passed.
- Ran `pnpm test:run` and completed its workspace and serialized groups.
Initial resource and timing failures passed on isolated reruns. All 149
serialized route suites passed.
- Reran the changed server, adapter, and UI suites after the rebase.
Coverage includes long-name upstream dispatch, configuration retry
suppression, cancellation evidence retention, privacy labels, oversized
run projection, and concurrent saved-message delivery.
- `pnpm test:e2e tests/e2e/legacy-failure-continuation.spec.ts` passed
all six browser scenarios. The recovery notice shows the run cause and
inspection link, and each recovery entry point reaches one new response.
- Added database-backed checks for active, removed, paused, unavailable,
and disabled chat connections. The final continuation and
recovery-notice suites passed 167 tests. Externally bound chats hide
board Continue and show a usable next action.
- All 55 GitHub checks passed on
`42afbf1371dcaeb72646e3d8f65c19ff7cddf8de`. Two unrelated Storybook jobs
were skipped by their normal conditions. Greptile reviewed that commit
at 5/5 with no findings and no open review threads.

## Risks

- Long tool names change to aliases. Existing short names stay
compatible. The original connection and upstream name remain the
dispatch authority.
- Invalid tool definitions no longer get automatic retries. An operator
must repair the configuration before a new attempt.
- Continuation changes apply only to positively identified unexpected
legacy cancellations with complete empty tool inventory. Operator Stop,
unknown historical cancellations, outstanding tools, and unverified
provider termination keep their holds.
- No database migration. The added projection fields are optional.
Cancellation reason and initiator IDs remain local run evidence; Sentry
receives only closed source and initiator-type labels and expectedness.

## Model Used

- OpenAI GPT-6 through Codex, with reasoning, repository editing, shell
execution, and GitHub tool use. The runtime does not expose the exact
model variant or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 13:47:59 -05:00
DottaandPaperclip 7d59de6113 feat(connections): probe provider usage limits on demand (#14936)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Connections store the AI accounts used by legacy and native runners.
> - Subscription accounts can reach session, weekly, model, or paid
usage limits.
> - Operators need to read these limits for a specific stored account
before making a routing decision.
> - This pull request adds an on-demand usage probe to the connection
service and account detail.
> - The result preserves provider limits, reset times, paid usage, and
unknown values for later consumers.

## Linked Issues or Issue Description

**Subsystem affected**

Shared contracts, the connection service and API, and the account detail
UI.

**Problem or motivation**

Managed AI accounts lack a common operation to read their current usage
limits. A local harness probe can read a different login from the
account selected for an agent.

**Proposed solution**

Add `aiConnectionService.probeUsage()` and a board-only connection usage
endpoint. Probe the selected credential grant on request. Support Codex,
Claude, and Grok subscriptions, plus OpenRouter API key limits.

**Alternatives considered**

Harness-specific automatic polling would couple the read to execution
and can read ambient credentials. This change uses the managed
connection credential and leaves scheduling and admission decisions to
later work.

**Roadmap alignment**

This extends the existing Personal & Shared AI Accounts capability. It
adds no routing or quota enforcement. Related: Refs #14459 for managed
OpenAI quota reads; Refs #14781 and Refs #13379 for downstream pacing
and budget work. This operation reads one requested account across all
three subscription providers.

## What Changed

- Add typed usage snapshots and a probe capability flag to managed AI
connections.
- Normalize Codex, Claude, Grok, and OpenRouter responses. Keep model
scopes, provider admission, reset periods, and paid allowances separate.
Preserve unknown values.
- Enforce company membership, credential audience, grant identity, and
connection lifecycle before reading the stored secret.
- Add a board-only `GET
/api/companies/:companyId/ai-connections/:connectionId/usage` endpoint
with `no-store` responses.
- Add manual **Check usage** and **Refresh** actions to account details.
Show compact usage bars, resets, admission and overage status; remove
repeated descriptions and account-default copy. Clear previous results
during a new request or error.
- Add Storybook previews using the production account components for all
four providers, initial checks, loading, and permission errors.
- Add provider, authorization, runner selection, API, and UI coverage.
Document provider sources and live qualification.

## Verification

- Initial provider, authorization, selection, API, and UI validation
passed (96 focused tests): `pnpm exec vitest run
server/src/services/ai-connection-usage.test.ts
server/src/__tests__/ai-connections.test.ts
ui/src/components/ai-connections/AiConnectionUsagePanel.test.tsx
server/src/__tests__/openapi-routes.test.ts`.
- `pnpm -r typecheck` passes for the initial implementation. After
simplifying the UI, 9 usage-panel and date-helper tests, UI typecheck,
token gates, and Storybook build pass. The initial feature module
boundary check also passed.
- Real Codex, Claude, and Grok credentials were saved to encrypted
disposable connections. The actual usage HTTP route returned 200 with
`status: ok`. Legacy and native runner selection checks passed. The
tests started no model turn and exchanged no refresh token. The
disposable databases and vaults were removed.
- Live Claude responses added structured scoped limits. Live Grok
responses omitted included-plan usage. Tests now cover both shapes and
preserve the Grok omission as unknown.
- The full workspace build passes. A full local test run hit a heartbeat
feedback timeout. That case passes in isolation. The duplicate local run
was stopped after all remote checks passed. The Slack ordering and
OpenCode transport CI flakes also pass in isolation and on the CI rerun.


- Current head: `ff3d479029a1c4248190323e221b2803cfb0d79d`. All 54
active checks pass. Two Storybook checks are intentionally skipped by
the workflow. Greptile is 5/5 with no unresolved review findings; the
branch is mergeable.

## Risks

- Subscription usage endpoints can change. Credentials can lack
usage-read permission. The probe returns explicit errors without fresh
limits in these cases.
- A successful probe can contain partial data. Missing utilization or
admission remains unknown. An enabled paid-usage switch does not prove a
funded balance.
- This change adds no migration. It does not change runner admission or
automatic provider selection. Provider requests use fixed endpoints,
disabled redirects, bounded response sizes, and a 15-second deadline.

## Model Used

OpenAI Codex, GPT-6, with reasoning, file editing, shell execution, and
HTTP tools. The session does not expose the exact runtime model variant
or context window size. Real provider credentials were used only for the
authorized live checks.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 11:47:14 -05:00
dependabot[bot] cf8ad63c80 build(deps-dev): bump tsx from 4.23.12 to 4.23.15 (#12965)
Bumps [tsx](https://github.com/privatenumber/tsx) from 4.23.12 to
4.23.15.
<details>
<summary>Release notes</summary>
<p><em>Sourced from <a
href="https://github.com/privatenumber/tsx/releases">tsx's
releases</a>.</em></p>
<blockquote>
<h2>v4.23.15</h2>
<h2><a
href="https://github.com/privatenumber/tsx/compare/v4.23.14...v4.23.15">4.23.15</a>
(2026-09-20)</h2>
<h3>Bug Fixes</h3>
<ul>
<li>exclude bare builtins from namespace inheritance (<a
href="https://github.com/privatenumber/tsx/commit/38e158857e50bca311be7c232a5057e5a2e5347a">38e1588</a>)</li>
<li>expose require.cache and require.extensions to tsImport CommonJS
modules (<a
href="https://github.com/privatenumber/tsx/commit/2da34075afaed43e2b7fd0aca5fbebaaf337ff3a">2da3407</a>)</li>
<li>make namespaced register() overloads portable for declaration emit
(<a
href="https://github.com/privatenumber/tsx/commit/562c434a5c8695e74327bbeb51cfeb9b86fc7e15">562c434</a>)</li>
</ul>
<hr />
<p>This release is also available on:</p>
<ul>
<li><a href="https://www.npmjs.com/package/tsx/v/4.23.15"><code>npm
package (@​latest dist-tag)</code></a></li>
</ul>
<h2>v4.23.14</h2>
<h2><a
href="https://github.com/privatenumber/tsx/compare/v4.23.13...v4.23.14">4.23.14</a>
(2026-09-20)</h2>
<h3>Bug Fixes</h3>
<ul>
<li>restore the CJS bridge namespace for Node 24 require(esm) under
tsImport() (<a
href="https://redirect.github.com/privatenumber/tsx/issues/802">#802</a>)
(<a
href="https://github.com/privatenumber/tsx/commit/6e5236b065738d3687a06396d064774cfede390f">6e5236b</a>)</li>
</ul>
<hr />
<p>This release is also available on:</p>
<ul>
<li><a href="https://www.npmjs.com/package/tsx/v/4.23.14"><code>npm
package (@​latest dist-tag)</code></a></li>
</ul>
<h2>v4.23.13</h2>
<h2><a
href="https://github.com/privatenumber/tsx/compare/v4.23.12...v4.23.13">4.23.13</a>
(2026-08-30)</h2>
<h3>Bug Fixes</h3>
<ul>
<li><strong>cache:</strong> bound shared transform cache memory (<a
href="https://redirect.github.com/privatenumber/tsx/issues/835">#835</a>)
(<a
href="https://github.com/privatenumber/tsx/commit/28e1f12d04cd2afe1db17f8555b14fe5fb567c6e">28e1f12</a>)</li>
</ul>
<hr />
<p>This release is also available on:</p>
<ul>
<li><a href="https://www.npmjs.com/package/tsx/v/4.23.13"><code>npm
package (@​latest dist-tag)</code></a></li>
</ul>
</blockquote>
</details>
<details>
<summary>Commits</summary>
<ul>
<li><a
href="https://github.com/privatenumber/tsx/commit/ca66105a17a2a4c6503fe3a12b5b9ec408286011"><code>ca66105</code></a>
test: fix drive-less file URLs in ESM resolver fixtures</li>
<li><a
href="https://github.com/privatenumber/tsx/commit/2da34075afaed43e2b7fd0aca5fbebaaf337ff3a"><code>2da3407</code></a>
fix: expose require.cache and require.extensions to tsImport CommonJS
modules</li>
<li><a
href="https://github.com/privatenumber/tsx/commit/38e158857e50bca311be7c232a5057e5a2e5347a"><code>38e1588</code></a>
fix: exclude bare builtins from namespace inheritance</li>
<li><a
href="https://github.com/privatenumber/tsx/commit/562c434a5c8695e74327bbeb51cfeb9b86fc7e15"><code>562c434</code></a>
fix: make namespaced register() overloads portable for declaration
emit</li>
<li><a
href="https://github.com/privatenumber/tsx/commit/edfb1f05a3f40b879a41a03a0801c2abd3a3ecf9"><code>edfb1f0</code></a>
build: upgrade pkgroll and externalize CJS loader reference</li>
<li><a
href="https://github.com/privatenumber/tsx/commit/70e78284837c859f09b96cd10cd71d007aa4b795"><code>70e7828</code></a>
test: upgrade tinyspy for disposable API</li>
<li><a
href="https://github.com/privatenumber/tsx/commit/9ed2022dfa9ea1be9511fe6abcde8110c25055a7"><code>9ed2022</code></a>
ci: avoid duplicate release notifications</li>
<li><a
href="https://github.com/privatenumber/tsx/commit/872e77ffc5e96ca5c4727e74c0694debcb26219b"><code>872e77f</code></a>
refactor: use disposables for cleanup</li>
<li><a
href="https://github.com/privatenumber/tsx/commit/6e5236b065738d3687a06396d064774cfede390f"><code>6e5236b</code></a>
fix: restore the CJS bridge namespace for Node 24 require(esm) under
tsImport...</li>
<li><a
href="https://github.com/privatenumber/tsx/commit/28e1f12d04cd2afe1db17f8555b14fe5fb567c6e"><code>28e1f12</code></a>
fix(cache): bound shared transform cache memory (<a
href="https://redirect.github.com/privatenumber/tsx/issues/835">#835</a>)</li>
<li>See full diff in <a
href="https://github.com/privatenumber/tsx/compare/v4.23.12...v4.23.15">compare
view</a></li>
</ul>
</details>
<br />

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2026-10-02 08:39:37 -07:00
Nicky LeachandPaperclip b2c565038b test(shared): make the worktree port registry lock suite deterministic (#12798)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Shared worktree services use lock leases and worker-thread
heartbeats
> - The lock test suite measured wall-clock timing across two threads
> - Processor contention allowed a heartbeat tick to change the value
during an assertion
> - This pull request removes that timing race and restores a regression
guard
> - The benefit is a stable test suite that still detects slow
heartbeats

## Linked Issues or Issue Description

**What happened?** The worktree port registry lock suite failed at
random under continuous-integration processor contention. The failure
reported a fresh timestamp where the test expected an old timestamp.

**Expected behavior** The suite must pass when the heartbeat runs at its
supported interval. It must also fail when the heartbeat interval
regresses.

**Steps to reproduce**
1. Run `npx vitest run src/worktree-port-registry.test.ts` in
`packages/shared`.
2. Repeat the run under bounded processor contention.
3. Set the heartbeat interval to 3000 ms and run the asynchronous
critical-section test.

**Paperclip version or commit**
`a661caf74e704f7700a8b8a1e79b76ebd04e3483`

**Deployment mode** Built from source.

**Installation method** Built from source.

**Agent adapter(s) involved** Not adapter-specific (core test).

**Database mode** Not database-related.

**Additional context** Related open pull requests are #11994, #11985,
and #11922. This pull request keeps all five tests active and does not
use `skip`, `skipIf`, or `todo`.

## What Changed

- Build the fallback-probe lock state by hand so no live heartbeat
changes the timestamp during the assertion.
- Count distinct heartbeat refreshes in the asynchronous
critical-section test.
- Close the fake probe and settle the pending lock attempt in a
`finally` block.
- Keep production code unchanged.

## Verification

- `npx vitest run src/worktree-port-registry.test.ts` — 5 of 5 tests
pass.
- `npx vitest run` — 72 files and 704 tests pass at submit time.
- `npx tsc --noEmit` — exit code 0.
- Ten target-file runs pass under bounded processor contention.
- A 3000 ms heartbeat interval fails with `expected 2 to be greater than
or equal to 3`.
- An inverted cleanup assertion exits normally in 379 ms without a
leaked worker.

## Risks

Low risk. This pull request changes one test file. It changes test setup
and assertions only.

## Model Used

OpenAI GPT-5 through Codex. Exact model ID: GPT-5. The model used tool
calls and code execution. The context window is not disclosed by the
runtime.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` /
`Closes: #` / `Refs: #` OR (b) described the issue in-PR following the
relevant issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 08:24:00 -07:00
Nicky LeachandPaperclip 9d0f7e2ddd fix(adapter-utils): make the directory merge lock crash test deterministic (#14881)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - A workspace restore merges a directory, and a cross-process lock
serializes that merge
> - The lock must recover after the process that holds it crashes
> - One test proves that recovery: it kills the holder process and then
acquires the lock
> - That test failed intermittently for two independent reasons, and
this pull request removes both
> - First, it spawned the holder through the tsx command-line entry
point, which re-spawns the evaluated code in a further child process, so
the kill signal reached only the wrapper and the real holder kept the
lock
> - Second, it replaced the global clock to force a timeout, which left
the acquisition with zero real retries, so a single transient busy
result failed the test
> - The benefit is a deterministic crash-recovery test and a reliable
continuous-integration signal

## Linked Issues or Issue Description

**What happened?**

The test `recovers a killed holder even when its recorded PID has been
reused` in `packages/adapter-utils/src/directory-merge-lock.test.ts`
failed intermittently in continuous integration. The failure reported
`ERR_WORKSPACE_RESTORE_LOCK_TIMEOUT` with `waitMs: 3` and
`knownLocalHolder: false`. A rerun of the same job on the same commit
passed.

**Expected behavior**

The test must pass every run. It must acquire the lock after the holder
process dies.

**Steps to reproduce**

1. Check out `master`.
2. Run `npx vitest run
packages/adapter-utils/src/directory-merge-lock.test.ts`.
3. Repeat the run. The named test fails intermittently.

**Paperclip version or commit**

`32e9f3ba0ec000578936731990d23bb0e77493fa`

**Deployment mode**

Built from source. The failure appears in the general test job of
continuous integration.

**Agent adapter(s) involved**

Not adapter-specific (core bug).

**Relevant logs or output**

```
ERR_WORKSPACE_RESTORE_LOCK_TIMEOUT
workspaceRestoreLock: { ownerState: 'alive', knownLocalHolder: false, waitMs: 3,
                        ownerSameProcess: true, ownerAgeMs: 60030, ownerPredatesProcess: true }
```

## What Changed

The test file had two independent defects. This pull request removes
both.

**1. The kill signal did not reach the real lock holder.**

The test spawned its holder through the tsx command-line entry point.
That entry point re-spawns the evaluated code in a further child
process. `SIGKILL` therefore killed only the wrapper, and the process
that had opened the lock database survived as an orphan that still held
the lock. The test now loads tsx as an `--import` hook, so the spawned
process is the real holder and the kill releases the lock at once. This
also stops the test from leaking an orphan process.

**2. The forced clock left the acquisition with zero retries.**

A test helper replaced `Date.now` to force a timeout. The implementation
reads `Date.now()` one time, to compute its deadline, so that single
read consumed the forced value and every later read returned a time
already past the deadline. The retry loop therefore got one attempt and
no retries. That is correct for a test that asserts a timeout, but the
crash-recovery test asserts a *successful* acquisition, so any transient
busy result on the first attempt failed it.

The fix removes the clock replacement from the whole file and gives each
test a real, short, explicit wait budget:

- `withDirectoryMergeLock` takes a new optional wait-budget parameter.
It threads through to the lock acquisition function. The production
default is the existing 30-second budget, and no production call site
changed.
- The five tests that assert a timeout pass a real 200-millisecond
budget. Each one still times out for the real reason, because the lock
is genuinely held or the legacy lock directory genuinely exists. Each
one now exercises at least four real retries of the 50-millisecond retry
interval.
- The crash-recovery test passes a real 5-second budget. A failure now
reports the structured `ERR_WORKSPACE_RESTORE_LOCK_TIMEOUT` diagnostic
well inside the test timeout, instead of a bare test timeout.

**No test timeout increased.** Every `it(..., N)` timeout in the file
equals its value on `master`.

## Verification

- Measured the first cause rather than assumed it: the spawned wrapper
process reported one process id, and the process that opened the lock
database reported a different process id and named the wrapper as its
parent. The real holder kept the lock for about 50 to 60 milliseconds
after the kill.
- Reproduced the failure deterministically before the change, with no
artificial processor load: 15 of 15 runs failed. Confirmed the fix: 15
of 15 runs passed.
- Ran the lock test file 15 times in series: 12 of 12 tests passed every
time.
- Confirmed the clock replacement is gone: a search for a `Date.now`
override in the file returns nothing.
- Confirmed the production default is unchanged at 30 seconds, and that
the diff touches no production call site.
- Proved the diagnostic still surfaces: with a temporary edit that held
the lock with a genuine live holder, the test failed with
`ERR_WORKSPACE_RESTORE_LOCK_TIMEOUT` and the full `workspaceRestoreLock`
block at about 5 seconds, inside the 15-second test timeout. The
temporary edit was reverted.
- `workspace-restore-merge.test.ts` passed 56 of 56. The adapter test
files that cover every production caller passed 116 of 116 and 52 of 52.
`agent-directory-working-copies.test.ts` passed 70 of 70.
- The `adapter-utils` and `server` type-checks passed with no error.
- Confirmed that no spawned process survives the test run.

## Risks

Low risk. The production change is one optional parameter with the
existing default, so every production caller keeps the real 30-second
budget and no production call site changed. The remaining change is
limited to one test file. The `--import` form of the tsx hook is already
used elsewhere in this repository, in the container image command and in
an end-to-end test configuration. Test coverage does not drop: the owner
record is diagnostic only, the SQLite reserved lock remains the
authority that the tests exercise, and the timeout-asserting tests now
exercise the real retry loop instead of a replaced clock. The file costs
about 0.5 to 0.9 seconds more wall clock than `master`, which is the
cost of the short real waits that replace the instant forced timeout.

## Model Used

Claude Sonnet 5 (`claude-sonnet-5`), used with extended thinking and
tool use for the diagnosis, the measurement, and the change.

## Checklist

Check every box that the state of the pull request satisfies. The local
test runs and the type checks are complete. Reconcile the
continuous-integration and review boxes after the checks reach their
terminal state.

## Test plan

- [x] Continuous integration is green on every check, including the
general test job.
- [x] The general test job passes the file
`packages/adapter-utils/src/directory-merge-lock.test.ts`.
- [x] Greptile returns 5 of 5 with no open item.
- [x] `mergeable: MERGEABLE` is terminal.

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 08:17:03 -07:00