Commit Graph
2833 Commits
Author SHA1 Message Date
Devin FoleyandPaperclip 5d79d88d68 fix(server): let settled native finalizations permit idle sleep (#18184)
## Thinking Path

> - Paperclip manages AI agents and their work.
> - Native runs retain finalization records for recovery and audit
history.
> - Idle sleep checks durable work before it stops an instance.
> - The current check treats every retained finalization as pending
work.
> - A committed record can remain after its run and status effects have
finished.
> - This pull request recognizes complete records without deleting them.
> - Instances can sleep while unfinished execution and recovery work
remain protected.

## Linked Issues or Issue Description

**What happened?**

A retained `native_run_finalizations` row prevents idle sleep even after
the run has finished and its status decision has been applied. The
current gate checks whether any row exists.

**Expected behavior**

Complete finalization history should remain available without counting
as pending work. Active leases, retries, accounting, recovery, and
incomplete status effects must still prevent sleep.

**Steps to reproduce**

1. Finish a native run and retain its committed finalization.
2. Confirm that its accepted result, assessment, applied decision, and
delivered effects agree.
3. Request an idle report under a valid quiet admission hold.
4. Observe that the retained row reports background work before this
change.

**Paperclip version or commit**

Reproduced on master at `cd0c86e5e1d427c8fa8aa8c3a9499391ee9b425b` with
a local PostgreSQL fixture.

**Deployment mode**

Server with PostgreSQL. No provider calls are needed to reproduce the
gate failure.

Related PR and issue searches found no duplicate for this check.

## What Changed

- Replace the blanket finalization-row check with a completion proof
bound to the same company, issue, run, accepted result, assessment, and
applied decision.
- Require the owning run's successful workspace-finalization receipt;
retain unresolved leases, retries, accounting, recovery, and status
effects.
- Share final-reply candidate discovery with the presentation recovery
worker, so a completed run cannot hide a required reply. The pure query
stays with native presentation; idle inspection uses it in the existing
read-only transaction and five-second statement limit.
- Register open warm sessions and in-flight close/checkpoint promises
with local idle inspection. Historical controller/provider process
metadata remains preserved.
- Add PostgreSQL and local-warm regressions and document the
retained-history rule.

## Verification

- PostgreSQL sleep/finalization and chat-monitor continuation suites:
300 tests passed, including 56 finalization cases.
- Local-warm regression: passed; an open session and its pending
close/checkpoint both block sleep until retirement completes.
- Server typecheck and server build: passed after review fixes.
- Full workspace typecheck and build: passed before the review
additions; hosted checks cover the updated revision.
- An earlier local full invocation encountered two chat recovery
failures that passed in isolation, and two existing Git workspace
fixture failures caused by Xcode system Git initializing `main`. Those
two pass with `init.defaultBranch=master` scoped to the test subprocess.
That superseded full invocation was stopped for review revisions; no
full local pass is claimed. No machine configuration or unrelated source
was changed.
- Fresh Apex review: 5/5 on `6846203fe2383bae1ede888fbaaedf83e9946e73`,
with all findings addressed.
- Hosted CI: fully green on `6846203fe2383bae1ede888fbaaedf83e9946e73`,
including the final verify gate. Twelve jobs were interrupted by a
simultaneous runner shutdown; rerunning the failed jobs completed
successfully.
- No hosted deployment of this change is claimed.

## Risks

This changes an automatic-stop gate. An incomplete proof could stop an
instance with pending work. The SQL fails closed and retains the
existing admission, local work, plugin, schedule, backup, and
provider-allocation gates. PostgreSQL cases cover unresolved leases,
retry/recovery intent, accounting, projections, rejected results,
unapplied decisions, and pending effects.

No migration or history deletion is required. Reverting the predicate
restores the conservative gate.

## Model Used

OpenAI GPT-6 through Codex, with repository tools and local PostgreSQL
verification.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 11:11:22 -07:00
Nicky Leach e2cfdc7e0c feat(plugins): expose GitHub credential broker to task providers (#18178) 2026-10-29 10:52:44 -07:00
DottaandPaperclip 9f3fc2094f Fix shared workspace seed capacity and trace deferred copyback (#18181)
Apply the existing company quota to company-shared workspace seed buckets. Preserve individual seed limits and recheck size after verification.

Trace each deferred native workspace finalization check and its resumed copyback under the same hashed run ID. Keep existing admission, ownership and retry behavior.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-29 12:44:34 -05:00
DottaandPaperclip f1911a4c53 perf(skills): move repository packages out of Postgres (#18082)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/205/changes/paperclip/205
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Agents receive selected company skills before each turn.
> - Imported skills can need files from the whole source repository.
> - The current path stores those files in Postgres and reads large JSON
payloads during preparation.
> - This pull request stores verified packages in the configured file or
object store and keeps preparation queries small.
> - It also converts old rows automatically and restores missing files
from the exact saved commit.
> - The result reduces database traffic while preserving skill versions
and repository dependencies.

## Linked Issues or Issue Description

**What existing behavior does this improve?**

Company skill import, version storage, and preparation before agent
turns.

**Current behavior**

Repository snapshot bodies live in JSONB. Skill preparation can read
those bodies again even when the files already exist on disk. Historical
packages and native assets also need a bounded cleanup path.

**Proposed behavior**

Store package archives and manifests through the existing storage
service. Keep version identities, receipts, hashes, and recovery
metadata in Postgres. Convert legacy rows after the stored package
passes read-back verification. A missing package can use legacy bytes or
its exact Git commit under current repository authorization. No separate
data-migration command is required.

**Reason and benefit**

The warm path sends no repository bodies through SQL and reads no object
bytes. Cleanup runs through the existing deadline coordinator. Current
versions, active runs, explicit pins, and authored content retain their
protection.

**Breaking changes**

The normal application schema upgrade is required. Single-version and
skill-file responses keep their existing shape. Version lists,
current-version summaries, and test-run version summaries now contain
file names and kinds without file bodies. Diff and restore fetch
selected versions through the existing single-version endpoint. Older
server builds must not write after conversion unless they support the
new package format. The storage override and rollback limits are
documented in `doc/skill-package-storage.md`.

**Additional context**

Related work: #15731 preserves repository dependencies; #17923 changes
version-cache scheduling; #18080 changes delivery to remote Codex homes.
This change owns package persistence, acquisition, and expiry. It does
not replace those delivery or scheduler changes.

## What Changed

- Add company-scoped archive receipts, exact-commit recovery recipes,
migration deadlines, and a durable object-deletion queue.
- Add bounded archive upload, read-back verification, extraction,
concurrent request coalescing, and verified local caches.
- Convert old snapshots and versions automatically. Keep legacy bytes
when verification fails.
- Recover missing files through current source authorization and the
original commit. Validate repository identity, file hashes, modes, and
the aggregate hash.
- Expire unused recoverable Git packages and native assets after 30
days. Preserve active pins and the durable copy of authored or unproven
content.
- Keep warm preparation queries metadata-only. Bound file digest caches
and avoid repeated body hashing when file identities are unchanged.
- Extend the existing storage contract with cancellation. Register
package work with the existing coordinator. Optional conversion retries
retain the original bytes and may wait for ingress without blocking
sleep.
- Add regression tests, operating guidance, a deep trace, benchmark
receipts, and an optional maintenance command.

## Verification

### Final master integration and review repair — October 29, 2026

Current head: `a6065424249e763dfeac37161f1b52a9f25bd9b7`. Commit
`f8bbdd3dbd` resolves the conflicts with master `76a796e964`; the final
two commits repair the Apex deletion findings below.

- Keep both package-maintenance and version-retention notifications in
their write transactions.
- Keep the shared run-pin predicate and master's controller-lease
deadline metadata. Package expiry reads the updated protected-version
result.
- Preserve every master migration entry. Generate migration **0415
(`0415_zippy_zemo.sql`)** after master's 0414. Its skill SQL is
byte-for-byte unchanged from the previously tested idempotent migration.
Retain only the five newest schema snapshots. Migration numbering and
safety checks pass.
- Repair failed file/folder deletion: preserve a complete temporary
subtree until transaction commit, restore on upload or SQL failure, and
restore callback failures before releasing the mutation lock. Both
PostgreSQL regressions reproduced missing files before the fix and now
pass. They cover binary data, executable permissions, empty folders,
unlisted files, unchanged database/version rows, successful retry after
upload-claim expiry, and historical reads.
- Reconcile lost commit replies under the same advisory and row locks.
Check the saved version and source identity before restoring. Keep
committed deletions intact and preserve backups when the database
outcome is unknown or a newer edit exists. Four real-PostgreSQL outcome
tests pass; the prior code failed three of them.
- Full workspace typecheck and production build pass on the final
commit. All **204** focused PostgreSQL package/cache/retention/authoring
and filesystem-boundary tests pass, with none skipped.
- Apex review **18 passes 5/5**, with zero new comments on the exact
final head. All **34** review conversations are resolved.
- [Final-head
CI](https://github.com/paperclipai/paperclip/actions/runs/40914116508)
completes successfully on attempt 2. The head has **55 successful
checks**, two neutral reports, two skipped checks, and a successful Snyk
status. No checks are pending or failing. All eight browser shards pass.
- Runner Vitest 2/2 timed out once in the unchanged ACPX
controller-replacement fixture. The same job passed on the preceding
commit. One unchanged CI retry passes all five ACPX recovery cases,
**2,253** Runner package cases and **126** native server integration
cases; their standard one and five skips remain. The initial timeout's
root cause is not established. Local diagnosis also hit the fixture's
eight-second session.open timeout with an authenticated Runner; no local
Runner pass is claimed.
- Both full local `pnpm test:run` attempts were stopped when Apex
identified deletion defects and source repair became necessary; neither
is claimed as a passing full local run. The final **204** focused tests,
full workspace typecheck, and production build pass. Full-suite
acceptance uses the final-head CI jobs. The superseded merge-head CI
included runners terminated by shutdown signals; each source repair
started a new full run.

- Auto-merge is enabled for squash merge. The final head is
conflict-free and all checks pass. GitHub's active master ruleset still
requires a code-owner approval for the dependency files. The existing
review requests are with `devinfoley`, `nickyleach`, and `forgottendev`;
no policy bypass was used.
- The earlier hosted stress and full native receipts below remain tied
to `a2e597d800`; they are not relabeled as a deployment of this final
integration. The earlier local PostgreSQL startup failure remains
recorded below; PostgreSQL ran successfully for this integration
verification.

### Full native skill execution — October 29, 2026

The full native-agent acceptance gap is closed on candidate
`a2e597d800eb989d565780e7aa947d5368676444`. Two qualifying native turns
used OpenAI API / `gpt-5.4-mini` in real Daytona sandboxes, on the same
disposable hosted TEST tenant as the stress test. A follow-up on the
same task consumed a newly saved skill version.

The task text asked for the assigned skill workflow. It did not contain
the proof nonce or expected receipt. The assigned authored skill
contained a Python verifier and a random package-local nonce. The agent
read the actual installed skill files and executed that verifier against
the imported, automatically converted 1,360-file repository package. It
checked the repository file count and reference/binary bytes, and
directly executed the repository's executable probe. Independent
verification matched the emitted JSON to the nonce and expected byte
hashes. The agent persisted the same receipt as its task response;
native finalization committed, workspace finalization succeeded, and
task state became Done.

| Qualifying turn | End-to-end run time | Recorded skills.prepare |
Repository files | Binary hex | Shell receipt SHA-256 |
|---|---:|---:|---:|---|---|
| Initial task | 47.881 s | 1822 ms | 1360 | `00ff07800a` |
`a1deb30dc095f2306c7aa9cc5ec396da12c68961cf5b809f4d7c20f7fc68493b` |
| Corrected follow-up, new nonce/version | 37.974 s | 377 ms | 1360 |
`00ff07800a` |
`dbcdc33fa1376b4edc136feae1cdf770560a73292467e93619efdda20e4282a7` |

Both successful shell receipts reported `probe: STRESS18082` and
`assetSha256:
e8ea7a2f15f7bb3b332a46adbef848465884c8996595aa234748befd544d1f3a`. Their
proof nonces, selected version IDs and receipt hashes differed, and both
ran on the same task. These are observed timings, not latency SLOs; they
include real provider work. The service stress-test timings remain a
separate measurement boundary.

Earlier failures remain in the evidence:

- The original five-minute Daytona allocation timeout never reached
model execution. After normal owned-stack restore, its durable cleanup
record was `expired` / `success`. The cause of that original allocation
timeout remains unknown; a later success establishes recovery only.
- Initial continuation setup used unsupported generic agent-update
fields and returned HTTP 409 before dispatch. Setup was corrected to use
the supported skill-assignment and versioned instruction commands.
- The intervening completed native turn read repository bytes and ran
the probe, but omitted the verifier JSON under the older test agent's
overly-specific instruction file. Its strict receipt validator failed;
it is not counted as a qualifying turn. Correcting the test agent's
instruction file and sending an explicit task-scoped wake produced the
qualifying follow-up above.
- The pinned application's immutable rate card omits `gpt-5.4-mini`, so
completed usage triggered the normal block-on-unpriced budget policy.
Supported append-only accounting corrections estimated the three
completed runs using the [official OpenAI model rate
card](https://developers.openai.com/api/docs/models/gpt-5.4-mini): $0.75
input, $0.075 cached input, $4.50 output per million tokens, assuming
standard processing. Estimates totaled 12.482655 cents. Original usage
and missing-price records are preserved; the $1 hard stop and
unpriced-usage guard stayed active.
- Model shell attempts included a missing `xxd` command and incorrect
guessed file paths. Those failed calls and subsequent successful actual
verifier calls remain visible in complete event streams. No
zero-tool-error claim is made.

No product source changed during this continuation. The previously
measured contention, cold-start and memory limits remain. The later
merge resolution is covered by the separate integration checks above;
these hosted receipts qualify their recorded candidate.


### Hosted stress test — October 29, 2026

**Hosted acceptance:** full native-agent execution and a changed-skill
follow-up pass on the recorded hosted candidate. The final integration
section above records the subsequent conflict resolution and its
separate checks.

Tested baseline `929e840595c8933ca485ac7a2e99413e1e11ca64` and this
exact candidate sequentially on one disposable TEST tenant, with
external Neon PostgreSQL and actual S3. The fixture contained **1,360
files / 22.4 MB / ten skills sharing one repository**. Measurements
cover deployed skill-preparation and native-context services in an
adjacent diagnostic process, not a complete agent turn. The container
had **24 vCPU / 24 GB**.

| Warm workload | Median before → after | p95 before → after | DB
returned value bytes/preparation before → after |
|---|---:|---:|---:|
| One skill, serial | 1,060 → 125 ms | 1,303 → 155 ms | 22,610,389 →
1,771 |
| One skill, four concurrent | 4,415 → 297 ms | 5,143 → 328 ms |
22,610,389 → 1,771 |
| Ten skills, serial | 5,723 → 535 ms | 6,057 → 600 ms | 224,739,030 →
10,671 |
| Ten skills, four concurrent | 24,410 → 1,986 ms | 24,833 → 2,221 ms |
224,739,030 → 10,671 |

- Candidate warm preparation performed **zero S3 GETs**. Ordinary-pool
queries fell from 16 to 9 for one skill and 61 to 9 for ten, excluding
dedicated lock connections. DB numbers measure returned values before
Drizzle decoding, not wire bytes. Baseline/candidate sample counts were
30/100, 32/100, 5/50 and 8/48 respectively; the small baseline ten-skill
samples are comparative evidence, not SLO estimates.
- **Application-UID soak:** 800 ten-skill preparations over 10.3
minutes, four workers paced by 2.5 seconds; **zero failures**, median
**559 ms**, p95 **775 ms**, p99 **910 ms**, zero warm S3 reads. All 726
accompanying health/company-list requests returned HTTP 200. Their
end-to-end p95 was 569/502 ms, including network latency. The probe
overlaps most of the soak. Soak DB-response capture was limited to its
first 60 seconds.
- **Important remaining costs:** an unpaced 16-way ten-skill burst had
p95 **8.32 seconds** because company-level preparation serializes. Cold
preparation took approximately **1.1–2.5 seconds** for one skill and
**7.4–10.0 seconds** for ten. Ten-skill diagnostic RSS remained about
**1.17 GiB** (baseline 1.18 GiB), and the soak peaked at **1.35 GiB**. A
concurrent whole-container sample was 3.45 GB. This does not establish
suitability for a small-memory host or eliminate per-entrypoint native
asset duplication.
- **Upgrade without a manual data migration passed:** legacy snapshot
JSON shrank from 22,465,691 bytes to `[]`, with a stored package and
zero pending conversions.
- **Recovery passed:** sixteen concurrent cold requests coalesced into
two S3 GETs; full bytes/binary/executable modes matched; same-size
corruption repaired; an injected storage failure preserved warm access
and failed cold access safely. A disabled public-Git source denied
recovery, and after the actual five-minute backoff its exact SHA
reconstructed all 229 files. Cross-company descriptor access was denied.
Private-Git credential revocation was not tested.
- **Retention passed:** reclaimed 27,754,496 allocated cache bytes,
deleted an unreferenced package row and both objects, preserved aged
authored history, and expired/reacquired reconstructible Git content. A
version pinned by the failed native run was correctly retained. Only
owned fixture timestamps were aged.
- **Browser UI passed:** authored skill creation, saved edit surviving
reload, version history, and restoration of earlier content.
- **Initial native attempt (superseded by the qualifying turns above):**
one real run failed at Daytona allocation after five minutes
(`setup_failed`), before any model execution. Provider cleanup also
reported failure. That attempt does not count as a passing native turn.
Its receipt and all evidence remain preserved; its cleanup later
recorded success after normal restoration.
- Initial A/B commands ran as SSH root. Diagnostic-owned lock/cache
permissions caused one setup HTTP 500 and the first UID-1000 soak to
fail; exact fixture paths were repaired. The final soak, retention and
recovery ran as application UID 1000. A fresh UID-1000 one-skill batch
also passed (30 samples, median 116 ms, p95 321 ms, 1,771 DB value
bytes/preparation). Earlier harness-export, SSH, npm provenance, backoff
and UI-wait failures remain recorded alongside their successful retries.
- Private evidence includes raw timings, assertions, HTTP probes,
screenshots and failure/cleanup receipts. Initial failed-campaign
cleanup suspended and retained the owned TEST tenant and released the
shared QA account lease at **15:22:41 UTC**. The tenant was subsequently
resumed under its existing ownership for the native execution
qualification above. Final cleanup completed at **15:53:09 UTC**: the
account lease is released and the tenant is suspended/retained under the
original October 30, 12:24:52 UTC retention deadline. Its separate stack
lease remains held; no active or pending-cleanup environment lease
remained. The original retention window is deliberately preserved even
after successful continuation.

- Earlier hosted-tested head:
`a2e597d800eb989d565780e7aa947d5368676444`, integrated with master
`929e840595`. The earlier merge conflicts were resolved at this head.
[Current-head
CI](https://github.com/paperclipai/paperclip/actions/runs/40884087629)
passed; all checks are complete with 55 successes, two neutral reports,
two skips, and no failures. [Apex review
15](https://github.com/paperclipai/paperclip/pull/18082#issuecomment-6480257258)
passed 5/5 with zero findings on this exact head. All review
conversations are resolved.
- Ten real-filesystem boundary cases and server typecheck pass locally
for the security fix. Coverage includes cache roots, descendants,
individual files, symlink aliases, recursive ancestors, a future
concurrent cache fill, and allowed sibling directories. [Current-head
private-project integration
tests](https://github.com/paperclipai/paperclip/actions/runs/40884087629/job/123483306405)
passed all 29 cases, including authorized and unauthorized imports of a
cached private package. Full typecheck, build, server suites, all eight
browser shards, and Runner checks passed in current-head CI. Local
database tests could not run because PostgreSQL could not initialize;
this limitation is recorded below.
- The earlier generated migration preserved the newest five snapshots.
The final integration renumbers its unchanged SQL to 0415. Migration
safety/numbering checks pass. Its SQL is byte-for-byte identical to the
previously verified idempotent skill migration; repeated application on
this latest schema was blocked by the same local database startup
failure.
- The broader verification before the final migration-only rebase passed
1,025 package, lifecycle, remote-launch, native-session, and
asset-retention tests, 52 focused UI tests, full workspace
typecheck/build, token gates, and map checks. The linked complete CI run
passed before the latest focused fixes.
- A disposable MinIO instance passed multipart upload, verified
read-back, and cold restoration of an 18 MB archive.
- Twenty warm samples with a synthetic 1,349-file, 22.8 MB repository
retained five metadata queries and zero object reads. Median preparation
was 256 ms for one selected skill and 691 ms for ten, with 5 ms emulated
network delay each way. These are local measurements, not production
latency guarantees.
- No production instance was changed. Earlier verification failures and
their disposition are retained below.

<details>
<summary>Earlier failures, review findings, fixes, and rerun
evidence</summary>

- The first CI pass found a stale inventory-span expectation and a
missing repository-read span. Both are fixed; all three observability
tests pass. One browser test copied page text into its YAML parser after
reload; its first unchanged-head retry passed, but the race recurred
after rebasing. The test now waits for the renamed URL and completed
reload before copying the editor, retaining its original assertions. The
earlier full local suite did not complete cleanly: it reported setup
timeouts and assertions, while isolated relevant reruns passed. The
complete current-head CI run closes that broad verification gap. No
production instance was changed.

- The first Apex review scored 2/5 and identified six issues. The fixes
protect authored history even when it shares an in-flight Git upload,
recheck upload expiry during orphan deletion, bound failed-upload
cleanup, retain per-version kind/encoding metadata, add sanitized
failure diagnostics, and correct the migration guide. The final focused
run passes all 140 tests; the preceding eight-file run passed all 149
tests, including local storage and S3 diagnostics. Server typecheck and
migration safety/numbering checks pass after the fixes. The second Apex
review scored 1/5 and found unbounded maintenance storage calls and
mismatched package/Git batch limits. Those are fixed with a 30-second
cancellable cleanup deadline, shared 100 MiB/10,000-file scanner and
storage limits, and bounded Git read batches. The proposed manual
lockfile edit was rejected with evidence of the enforced CI-owned
lockfile policy. All 19 storage/recovery unit tests and server
typechecking pass. The new database-backed cleanup/conversion tests were
locally skipped because the host exhausted its PostgreSQL semaphore
capacity (confirmed directly by initdb). That gap is closed by
current-head CI: [package-store
tests](https://github.com/paperclipai/paperclip/actions/runs/40771320775/job/123109300889)
pass all 18 cases and [package-worker
tests](https://github.com/paperclipai/paperclip/actions/runs/40771320775/job/123109301157)
pass all 7, with no skips in either suite. The corrected YAML browser
shard passes. A separate planning-fixture test failed its cleanup DELETE
with an activity-log foreign key violation after its behavior assertions
passed; its one unchanged-head retry passed. The third Apex review
scored 1/5 and identified a one-slot pool deadlock, projected path
limits, cleanup holding the preparation lock during archive reads, and a
publication/expiry race. These are fixed with transaction-local reads,
prefix-aware bounds, isolated verification, and shared package row locks
with a publication grace. The separate Paperclip review also found stale
historical inspection, eager history downloads, and conversion retries
blocking sleep. Those are fixed. Local PostgreSQL capacity recovered:
the new database regressions ran, including the one-slot fork, paused
storage during a warm turn, and a locked publication during expiry. The
expanded run passed 144/145 tests; its remaining assertion still
expected file bodies from the version list and was updated to fetch the
selected version. The corrected company-skill suite passes all 81 tests,
and the final package/projection run passes all 27. All 52 focused UI
tests pass after updating their query-provider fixtures; the first UI
run exposed a fixture remount, and the follow-up exposed an editing
syntax error, both corrected. Full workspace typecheck and build, token
gates, and map checks pass. The sandbox initially blocked the build
tool’s local IPC socket; the authorized build rerun passed. Master then
claimed migration 0401. The branch is rebased on f8226b0515, the
unchanged SQL is regenerated as 0402, and repeated application passed
twice on the combined schema. Post-rebase workspace typecheck passes.
All 1,025 package, lifecycle, remote-launch, native-session, and
asset-retention tests pass on the combined head. All CI checks passed
for head 9d80a3b52d. The fourth Apex review scored 3/5 and found a
save/edit lock-order cycle, a retry retaining an uncommitted source ID
in its recovery recipe, and a summary read racing conversion. Commit
b7d9237c6a fixes all three. The new concurrency and retry tests pass
within all 61 package/source tests, and server typecheck passes. Master
then claimed migration 0402. The branch is now rebased on 65fa1cd617 and
the unchanged SQL is regenerated as 0403. All 68 package, source, and
worker regressions, server typecheck, migration safety/numbering, and
repeated migration application pass on current head 62553671a0.
Subsequent verification and review outcomes are recorded below.


- The fifth Apex review scored 4/5 and found cached version reads
unnecessarily depending on object storage and conversion reads missing
the coordinator cancellation signal. Commit 1eb90d80be fixes both:
cached reads verify bytes without the preparation lock; manifest and
archive reads carry cancellation through conversion. The first focused
run passed 70/71 tests, including all three new cases, but the existing
diagnostic test observed no warning. Its fixture now sets an explicitly
expired migration deadline; the final worker suite passes all nine
cases. Server typecheck passes.


- The sixth Apex review scored 4/5 with one finding: concurrent cached
inventories were unbounded. Commit 4b7589e14c gives cached inventories
and previews a two-reader/32-waiter limit independent of cold storage.
The first expanded pressure test observed a third reader before the
preview path had the same bound; both paths now share the local limit.
All 73 focused cases pass, followed by all 29 package cases after the
final overload adjustment; server typecheck passes. The separate
Paperclip review found no must-fix or should-fix issues. Its optional
suggestion to persist durability verification was considered: cleanup
intentionally verifies current external bytes before discarding the last
local authored copy, and the missing-object regression requires that
check. Shared-package eviction happens on cold fills with at most two
attempts and a ten-second budget.


- The seventh Apex review reached 5/5 with one remaining P2:
timeout-bearing manifest reads bypassed request coalescing. The security
review also found repeated archive acquisition after a cold
administrative read. Commit 79a80a39d2 shares manifest loads with
per-caller cancellation and cancels the underlying work when the last
caller leaves; coalesces identical cold version/file requests; and
publishes verified restored packages into the shared cache. Publication
uses a short nonblocking lock, while eviction verification runs outside
it. The first expanded run passed 73/74 tests and exposed a missing
originating DB for cache publication inside read-only inspection;
transaction readers now pass that owner explicitly, keeping metadata on
the transaction. The corrected run passed 75/75. A final eviction test
initially expected the shared package to remain after only its separate
runtime projection was reused; it now explicitly accesses the shared
package during verification. All 32 final package tests pass, including
independent caller cancellation, one acquisition across
concurrent/repeated reads, and warm preparation during stalled eviction
verification. Server typecheck passes.


- The eighth Apex review scored 4/5 with one finding: decoded cold
inventories outlived the storage semaphore while waiting for cleanup.
Commit 9d7921d1ec adds a separate two-response/32-waiter lifetime bound
held through cleanup, preserving the independent warm-read queue and
forwarding cancellation through eviction verification. The new
regression pauses cleanup after two responses decode, verifies a third
archive stays queued, and completes warm preparation before releasing
cleanup. All 77 package/source/worker cases and server typecheck pass.
On the preceding head, serialized server shard 6/9 was interrupted with
“The operation was canceled” after 57 seconds of tests; the log contains
no failing assertion. Fresh latest-head CI reruns that shard along with
the other gates.

- The ninth Apex review scored 4/5 with one P1: cold responses could own
both permits while waiting on a one-slot ordinary database pool held by
a queued transaction reader. Commit a94f0e409f reads caller-scoped
metadata before admission and isolates all acquisition/cleanup SQL on a
private connection. The new real-PostgreSQL regression reproduces the
deadlock against the previous head and passes with the fix; all 78
focused cases and server typecheck pass. The previous CI run completed
with 54 successful checks, including both formerly interrupted/stuck
serialized shards.

- The tenth Apex review scored 4/5 with one P1: preloading legacy bodies
before admission could retain many full repositories in queued requests.
Commit 276e353a37 removes that preload and also bounds legacy manifest
derivation/fallback, using private connections inside the I/O slot. All
80 focused tests pass; the final synchronized package suite passes all
36 tests and server typecheck passes.

- Apex review 11 returned 5/5 with zero comments on 276e353a37. While it
ran, master 8bc051245f added migration 0403, creating a metadata
conflict. Merge commit e1783764d9 integrates master and generates
0404_clumsy_leo.sql; its skill SQL is byte-for-byte identical to the
previously verified migration. The combined schema passes migration
safety/numbering, repeated SQL application twice, all 80 focused
PostgreSQL tests, full workspace typecheck, and full build. The
preceding a94f0e409f CI run was superseded and cancelled while its final
runner job was active; no old-head success is claimed for that run.

- Final acceptance: Apex review 12 returned 5/5 with zero comments on
e1783764d9. All 28 review threads are resolved. The final head has 55
successful checks, two neutral reports, two skipped checks, and no
pending or failing checks; the PR workflow completed successfully.
Superseded run 40789121902 was cancelled to free its workflow slot for
the final head; normal cancellation did not finish promptly, so force
cancellation completed it.

- October 29 conflict resolution (867c00673b): master 929e840595 added
installed-selection reuse and bundled relocation, routine cleanup
notifications, a hardened YAML copy helper, and migrations through 0413.
The merge retains those behaviors together with package read scoping and
the public-selection fast path; restricted selections still reauthorize
and the full row read rechecks scope. Generated migration 0414 retains
the existing SQL unchanged. Workspace typecheck/build and migration
checks pass. Local database verification is unavailable: initdb reports
semget / “could not create semaphores: No space left on device”; all 168
cases skipped, and repeated migration application failed at startup.
Docker returned HTTP 500 during container creation, so no Docker test
pass is claimed. Current-head CI must close this gap.

- Apex review 14 scored 3/5 with one P1: a local import could copy
cached private package files into a company-wide skill. Commit
a2e597d800 rejects cache trees and ancestors through a canonical
filesystem boundary, including aliases and ancestors checked before a
concurrent fill. Ten local filesystem tests and server typecheck pass.
The existing private-project integration case now rejects package-cache
imports for both authorized and unauthorized users. The preceding merge
commit’s complete CI run passed, and logs confirm all 168 locally
skipped cases executed successfully: package store 36, sources 35,
package worker 9, runtime selection 4, observability 3, authoring 81.

- Apex review 15 returned 5/5 with zero new findings on a2e597d800. The
separate Paperclip review found no must-fix or should-fix issues. Its
optional suggestions were considered: unexpected filesystem cleanup
failures remain visible, the durable marker cannot replace checking that
bytes still exist before deleting a last local authored copy, and
administrative history batching remains outside the pre-turn
optimization. The cache-path literal centralization suggestion is also
optional; the current producer and guard use the same directory, covered
by the new integration regression. All review conversations are
resolved.

- Earlier October 29 CI/Apex acceptance: a2e597d800 was mergeable at
that check, Apex review 15 passed 5/5 with zero findings, and all review
conversations were resolved. The hosted verification above records the
later acceptance limits and renewed conflicts. Workflow 40884087629
completed successfully, with 55 successful checks, two neutral reports,
two skips, and no pending or failed checks. The project-skill-sources
job log confirms all 29 cases ran and passed, closing the latest
integration gap. The preceding merge workflow also confirmed all 168
focused database cases ran and passed. No local PostgreSQL or Docker
pass is claimed.

</details>

## Risks

- First use after eviction can require storage or Git access. Revoked
grants, removed sources, and unreachable commits can prevent
reconstruction. Recovery never substitutes a newer commit.
- Historical packages without a proven recipe keep durable bytes.
Cleanup favors retention when a run pin cannot be interpreted safely.
- New uploads and conversion use bounded work and persisted retries.
Large initial conversions still add temporary storage and database load.
- Optional cleanup can wait until the next server wake. Supported
notifications assume one owning server process.
- Per-entrypoint native tree duplication and cold preparation cost
remain. The final ten-skill cold sample took 47.6 seconds on the shared
host.
- Generic authored edits can still hold an existing edit transaction
while a package uploads.
- Explicit file/folder deletion uses temporary disk space for rollback.
An uncertain commit with a changed skill or unavailable database retains
that backup and logs its location for recovery.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, repository tools, code
execution, and tests. The exact served model ID and context window are
not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 12:19:37 -05:00
Nicky LeachandPaperclip 247de89eae fix(runner): preserve warm tasks during recovery (#18169)
## Thinking Path

> - Paperclip manages agent work and the lifetime of its execution
resources.
> - A warm native task can keep one Runner alive between successful
turns.
> - Foreground completion selects whether that resource stays running or
stops.
> - Background recovery must use the same selected policy.
> - Recovery currently reads that policy only from workspace copy-back
records.
> - A task without such a record can be stopped immediately after
foreground retention.
> - This pull request saves the resource policy with the native runtime
and permits the retained task to refresh its control connection.

## Linked Issues or Issue Description

**What happened?**

Background native finalization can stop a successful warm Runner when
its run has no Core workspace-sync record. Foreground completion retains
that same task. The stopped Runner cannot receive the later drain and
suspend commands. Cold resume then correctly rejects its unproven
checkpoint.

Hosted diagnostics confirmed the recovery reconciler attempted
environment release immediately after foreground retention. The provider
connection returned HTTP 404 within the same second. A database-backed
regression reproduced the stop without a workspace-sync record.

A separate authorization gap also prevents the current retained task
from refreshing its connection endpoint after the run succeeds.

**Expected behavior**

Foreground completion and recovery must use the selected resource
policy. A successful warm task stays running until its idle shutdown can
suspend it. Failed or cancelled work still stops. The current retained
task can refresh its existing control route, but cannot prepare or
submit new execution.

**Steps to reproduce**

1. Select a warm native runtime on a reusable remote execution
environment.
2. Complete a turn without a Core workspace-sync record.
3. Let native finalization recovery settle the still-active run lease
before foreground retention finishes.
4. Before this change, recovery defaults to `stop_and_retain` and
invokes the provider stop path.
5. Separately, request the retained task's connection endpoint after
successful completion. Before this change, Core rejects that request.

**Paperclip version/commit**

The hosted failure used Core 31b927e301.
Regressions also reproduced on master at 6d59f5ef7.

**Deployment mode**

A remote native execution environment with reusable warm tasks. The
resource policy is generic and applies across harnesses and providers.

Related recovery coverage: Refs #18161. This change preserves the
suspended-checkpoint admission guard. Existing tasks without the newly
saved policy retain the previous conservative fallback; deployments must
drain or recover them explicitly.

## What Changed

- Save the selected native resource disposition in the existing
runtime-selection transaction. Add no startup database round trip or
network request.
- Read this small policy in background settlement and recovery when no
workspace-sync record exists. Preserve valid workspace-sync policies and
export-retry behavior.
- Keep failed and cancelled runs out of warm retention.
- Permit connection refresh for a successful, dispatched warm task on
its current retained reusable lease. Keep retirement, termination,
expiry, saved-run identity, and plugin capability checks.
- Add database-backed retention and selection regressions,
failure/cancellation coverage, and bounded projection checks. Document
the lifecycle and access contracts.

## Verification

- Before the source edits, the no-workspace-sync regression invoked the
driver with `stop_and_retain` instead of retaining the lease. Both
runtime-selection cases failed because the resource policy was absent.
- After the source edits, those regressions and both
run-state/runtime-selection files passed. The three-file run had 77
passes and two new fixture expectation failures. Those fixtures were
corrected. Final-head GitHub CI passed, including the server suites,
Runner checks, typecheck, build, and E2E gates. The local rerun was
deferred at the user's request.
- Commands: `node_modules/.bin/vitest run
server/src/__tests__/native-environment-settlement-work.test.ts
server/src/services/heartbeat/runtime-selection.test.ts
server/src/services/heartbeat/run-state.test.ts`.
- The connection authorization regression failed before its edit. All 34
tests in `server/src/__tests__/environment-task-runtime.test.ts` then
passed.
- `node scripts/check-maps.mjs` and `git diff --check` passed.
- No comprehensive local suite was run. Further local tests and VM
reproductions were stopped at the user's request to conserve battery and
mobile data. GitHub CI verifies the final head.
- Hosted verification of this patch requires deployment after merge.
Passing pre-patch retries did not establish repair of the original
failure.

- Standard Greptile and the subsequent requested Apex review both
returned **5/5** on `360bcd7e789d65950c27484af237faec02553666`, with no
inline findings.

## Risks

- This adds one server-owned field to the existing run profile JSON; no
migration is required. Invalid or absent policy keeps the previous
conservative fallback.
- Valid workspace-sync disposition remains authoritative. Pending export
and failed finalization still use stop-and-retain safety behavior.
- Retained connection access requires a successful run, matching saved
run identity, dispatched warm task, unexpired reusable lease, and no
retirement or termination. Superseded leases and new execution remain
denied.
- The cold-resume checkpoint proof is unchanged. This patch does not
make the already-stopped task's unsuspended checkpoint resumable.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, tool use, and code
execution. The host does not expose a more specific serving model ID or
context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run targeted local checks; final verification passed in
GitHub CI (local rerun deferred at the user's request)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 09:19:49 -07:00
DottaandPaperclip 6f278dd6d7 fix(runtime): settle recovery lease and connection lifecycles (#18167)
## Thinking Path

> - Paperclip manages AI agents and their work.
> - A remote runner can survive a controller restart.
> - Recovery renews its execution lease during slow preparation.
> - The native executor then shares that renewal timer.
> - Preparation kept its reference until all finalization finished. A
tick after lease release treated completion as ownership loss and
detached the retained runner.
> - A Linux continuity test also found that buffered wire events could
arrive before their connection was registered. Cleanup then kept a
completed promise under an undefined key and never finished.
> - This pull request transfers renewal ownership after execution
acquires its reference. It also registers each connection before wire
callbacks can run.
> - Recovered turns can complete, retain the warm runner, and settle
connection cleanup.

## Linked Issues or Issue Description

**What happened?**

A recovered remote run could complete, release its coordinator lease,
then detach during instruction collection. The next turn could find the
old runner still using the ingress port. Recovery then stopped because
it could not prove process ownership.

**Expected behavior**

Preparation keeps the lease alive until execution owns renewal.
Execution stops renewal before releasing the lease. Actual ownership
loss still detaches the runner. Buffered wire callbacks must use the
registered connection, and cleanup must finish.

**Steps to reproduce**

1. Recover an in-flight remote runner after a controller restart.
2. Let the recovered turn complete.
3. Hold instruction collection open through the next lease renewal tick.
4. Send a follow-up that needs the retained runner.

Related: #17439 introduced remote controller recovery. #18011 preserves
checkpoint authority through warm preparation. This change fixes the
lifetime of preparation's renewal reference.

## What Changed

- Pass an internal lease-acquired callback from recovery through
heartbeat dispatch.
- Release preparation's renewal reference after the executor registers
its own. Keep final cleanup for exits before dispatch.
- Add a PostgreSQL regression for completion while finalization is still
pending. Cover callback forwarding, acquire-before-release ordering, and
failure before dispatch.
- Register the authority connection before subscribing to wire events.
Handle an immediate close before accepting buffered data.
- Add regressions for a message or close delivered during subscription.
- Extend Linux continuity coverage with preparation renewal and delayed
instruction collection after recovery.
- Update the continuity guide and session verification recipes.

## Verification

- The new recovery regression failed before the fix because renewal
detached the runner after lease release. The 76 recovery, renewal, and
dispatch tests then passed. The final ordering and early-exit checks
passed again after replacing fixed sleeps with controlled interval
ticks.
- Both buffered-wire regressions failed before the connection fix. All
170 control-plane tests passed afterward. Existing tests cover stale
authority, ownership loss, pending operations, and closed ingress.
- Linux ARM64 acceptance passed at
`a7daefacceb8bd994d0b79d284cdf54f3e3829d1`, with Node 24.19.0,
PostgreSQL, the real Rust runner, TLS ingress, and a deterministic Codex
protocol fixture. The test interrupted the first turn, recovered it,
held finalization open for a renewal interval, and completed two
follow-ups. It retained one provider process, three turns in one
history, and the same runner identity. Final suspension and connection
cleanup completed. The ordinary warm-reuse case also passed three turns
with one provider process.
- Earlier Linux attempts completed the turns but hung during cleanup. A
debugger found a fulfilled promise keyed by an undefined connection. The
regression reproduces that defect. One later setup attempt timed out
while staging an unstripped 373 MB debug binary. The passing run used
the same binary with debug symbols removed.
- Reproduce Linux acceptance with the `same-server` case in
`doc/testing-native-remote-continuity.md`.
- `pnpm -r typecheck`, `pnpm build`, map validation, and `git diff
--check` passed at the final revision. The full local `pnpm test:run`
command was attempted, but the serial run had not finished after 13
minutes. It was stopped after the equivalent CI lanes passed. It is not
counted as a full local pass.
- Greptile and the Paperclip review both scored the final revision 5/5
with no findings. All Runner verification lanes passed. The first CI
attempt hit timing failures in voice recovery, agent YAML configuration,
and the task-title outage browser test. The full YAML and voice-recovery
files passed locally (88 and 19 tests). These paths were unchanged and
passed on the prior revision. All three passed on the single retry.
Final current-head status: 55 successful checks, one neutral check, and
two skipped Storybook checks. No pending or failed checks remain.
- Live Daytona/model acceptance and recovery of the hosted task remain
unverified. This PR does not deploy the change.

## Risks

- Releasing preparation before execution starts renewal could leave a
gap in authority. The callback runs after the executor registers its
reference.
- Preparation errors must not leak renewal. The recovery promise retains
idempotent final cleanup.
- Wire callbacks can run during subscription. Message and close
regressions check that registration is complete before either callback
runs.
- No schema, API, model, permission, lease duration, or retry policy
changes.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, repository tools, code
execution, and browser diagnostics. The exact serving model identifier
and context window are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 11:18:53 -05:00
07c6df260b fix(server): schedule archived runner evidence from saved deadlines (#17925)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/85/changes/paperclip/85
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Retired native sessions leave continuity and quarantine evidence on
disk.
> - The old hourly loop mixes evidence retention with backup expiry,
which has different database eligibility rules.
> - Evidence already has saved creation timestamps and local publication
signals.
> - This pull request gives evidence its own registered worker and
actual next deadline.
> - The worker stops filesystem and SQL activity when its evidence
obligations settle.

## Linked Issues or Issue Description

Stack slice 65. Parent: #17923
(`codex/sleep-64-skill-version-retention`). Related foundation: #15625.

**What happened?**

At parent `7b94aa185c29673372646bbf2e07a2fbd16bc394`, an hourly
backup/evidence tick still inspects native state roots. Evidence's
private due time is checked by that recurring tick instead of the shared
scheduler. Empty evidence and future retention windows have no reason to
be rediscovered every hour.

**Expected behavior**

Reconstruct evidence once. Wake from the existing publication signal.
Register the earliest saved retention deadline. Keep busy, failed, or
incomplete evidence recoverable. Preserve backup eligibility as a
separate duty.

**Steps to reproduce**

Start retention with an empty evidence root or archives inside the
seven-day window. The old timer still visits the combined owner. The new
evidence worker disarms when empty, or registers the saved expiry with
no evidence filesystem or SQL calls between relevant changes and that
deadline.

## What Changed

- Add an evidence worker through the delivery coordinator and shared
scheduler. Track startup reconstruction without delaying HTTP readiness.
Unsubscribe local publication before delivery shutdown.
- Select `backups` for the existing backup timer and `evidence` for the
new worker. Existing callers that omit the selection retain combined
behavior. Backup expiration remains the next separate migration.
- Use hourly retries for concrete busy or failed evidence, with earlier
saved expiries and one-second continuations independent. Restore
candidate/removal/byte summaries. Schedule publication at the first
removable instant; preserve legacy manual-tick semantics.
- Expose the existing earliest evidence deadline. Preserve one-second
bounded continuation, concrete failure/busy retries, cleanup-source
archive exclusions, symlink protection, late activity checks, atomic
rename, and interrupted removal recovery.
- Preserve non-ENOENT inspection errors as recovery obligations. Retry a
failed session root in a new evidence pass instead of continuing past it
and forgetting it.
- Register the first removable instant after the inclusive retention
boundary. Keep the existing manual dry-run publication semantics.
- Add real filesystem/isolated PostgreSQL lifecycle tests and
disabled/held-startup wiring cases. Add no table or migration.

The archive and quarantine writers already call
`noteNativeRunnerEvidence`; this PR connects that existing signal to the
scheduler. Shared code owns scheduling, while evidence rules stay with
the retention service. See
[`doc/plans/2026-10-27-runner-evidence-retention-sleep-audit.md`](doc/plans/2026-10-27-runner-evidence-retention-sleep-audit.md).

## Verification

- Adopted actual prerequisite squash
`b06ea111a254c62e0a55199b010d82e0adb33bf0` from #17923 through normal
merges. Qualified runtime/package/UI/map trees remain unchanged. The
final nine-path diff includes one browser-spec readiness repair.
- Runtime qualification remains **652 passing TypeScript cases across 22
complete files**, plus **29 passing Rust cases** in native-backend,
runtime-notification and configured-environment targets. One actual
closed Pi snapshot launch is intentionally skipped because its external
distribution root is not provided. Accepted source is
`b80eee32f344ae0218d8b791c14f2ea174da09cc`; all runtime and earlier
sleep-test bytes are preserved.
- The complete outage-recovery browser file passes **all five journeys**
on a fresh isolated database after four additive rendered-history
readiness assertions. Every original assertion, outage control and
timeout remains byte-identical when those new lines are removed. The
intentionally unresolved first-session scenario keeps its pre-auth
interaction and delayed-owner coverage. The prior CI/local timeout
evidence and one rejected broader precondition remain in the audit.
- Adapter/Runner/database builds, server/Runner typechecking, Rust
formatting/workspace checks, server build, module boundaries, migration
order and generated TypeScript/Rust profiles pass. PostgreSQL 17
fixtures apply all 413 journal entries through index 414; source hashes
and temporary fixture imports restore exactly.
- **Inherited validation exception:** Copilot profile 81's separate
source-identity check fails on the merged Rust configured-environment
hash. Its inputs and attestations equal upstream and stay unchanged
here. Grok's identity check passes. No release attestation is
regenerated or new live-provider qualification claimed. Required
exact-head CI/security and Greptile 5/5 still must pass.
- [The evidence
audit](doc/plans/2026-10-27-runner-evidence-retention-sleep-audit.md)
retains historical failures, counts and limitations. No full local
repository-suite, live provider, external-alarm, measured suspension or
fleet-savings claim. Fresh final-head CI/security, exact-head Greptile
5/5 and actionable Ponytail findings remain separate merge gates.

## Risks

- Live publication is the existing server-owned executor in one process.
Independent filesystem writers need an explicit signal contract. Startup
reconstructs restart state.
- Busy sessions and concrete inspection/removal failures retain retries.
Unknown cleanup-source archives remain protected.
- The existing scan enumerates directory names before applying its
entry/removal budget. This PR preserves that behavior and does not claim
a bounded total directory-listing allocation.
- An in-process deadline cannot wake stopped compute. Cloud sleep-safety
and external-alarm coverage stay unchanged. Physical evidence
reclamation can wait for a supported host wake.
- Backup expiration still has an hourly database eligibility scan. This
slice removes only the archived-evidence duty from that loop and does
not claim full instance suspension.

## Model Used

OpenAI Codex (GPT-6-based coding agent), using repository inspection,
normal Git merges, composition proofs and complete
PostgreSQL/filesystem/startup suites. No subagents were used in this
reconciliation.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Codex <noreply@openai.com>
2026-10-29 11:12:16 -05:00
DottaandPaperclip c32e1ba6da fix(onboarding): keep approved child task handoffs runnable (#18160)
## Thinking Path

> - Paperclip manages work through tasks, agent runs, dependencies, and
human decisions.
> - The first-task workflow asks for approval before it creates an
execution task.
> - File-producing work must run on a child task before onboarding can
finish.
> - A child blocked by its onboarding source cannot start while the
source waits for that child.
> - This change rejects that dependency during task creation and later
edits, and gives the agent a correction.
> - The shipped recipe shows the dependency direction and requires the
actual approved inputs in the child instructions.

## Linked Issues or Issue Description

**What happened?**

After human approval, an onboarding run could create a child with the
onboarding source in `blockedByTaskIds`. Creation saved a blocked child
with no wake. The parent could then wait for that child. A handoff could
also refer to input from the parent conversation without including the
input in the child description.

**Expected behavior**

The approved child can execute before its waiting parent. Invalid
first-task dependency input fails before task creation and leaves the
same command key available for a corrected call. The child instructions
include the required approved input and constraints.

**Steps to reproduce**

1. Accept a proposal on a server-created first task.
2. Call native `create_task` with `status: "todo"` and the onboarding
source in `blockedByTaskIds`.
3. Observe a blocked child with no scheduled wake. Block the parent on
that child to expose the stalled handoff.

**Paperclip version or commit**

The regression reproduces on `f8484a9f8d1f68e9534fee4f29e00e716dc680f4`.
The repair is based on current master.

**Deployment mode**

Core native and REST task creation. The same server boundary serves
self-hosted and hosted instances.

Related: #18080 fixed remote delivery of the selected first-task skill.
This change handles the later child handoff boundary.

## What Changed

- Reject a task blocked by its authenticated first-task source during
creation and later dependency edits. Later agent edits also check the
locked target's server-owned onboarding parent, protecting a child
running under its own execution. Compare UUID identity in PostgreSQL so
alternate supported UUID spellings cannot bypass the check. The error
explains the correction.
- Add a native child/dependency recipe with self-contained approved
input guidance. Clarify the general `create_task` input descriptions and
update their generated contracts.
- Cover native and REST rejection, corrected retry, preserved valid
dependencies and replay, and an executable recipe with exact input bytes
read from the child's own context. Thread the authenticated run through
native dependency edits. Keep blocker corrections independent of a new
proposal decision.
- Update execution semantics and the existing onboarding map entries.

## Verification

- Red on `f8484a9f`: the new native regression received a created
blocked child instead of the expected rejection.
- Review regressions were red on the original PR head: uppercase,
unhyphenated and braced source UUIDs created blocked children; a later
child PATCH returned 200 and saved the reversed blocker.
- Review follow-up reproduced both native and REST child-own-run
bypasses on `75fa75a6`: the native dependency call applied the reverse
edge; the child's own PATCH returned 200. The regression uses the actual
authenticated child execution and an already checked-out task.
- All 95 tests across first-task admission, assets, and the full native
tool-authority suite pass. The shipped recipe is validated against the
native schemas and exercised through real task/dependency services with
disposable PostgreSQL. Rejected PATCH tests preserve existing
authorization and attempt-audit behavior and require no requested
task-field, relation or wake change. Compatibility controls retain
ordinary manual parent blockers, explicit board edits, other blockers
and empty-list corrections.
- Runner TypeScript build, generated contracts, capability inventory,
protocol manifest, and map checks passed.
- Server typecheck and all 95 focused tests pass with the child-run
follow-up. All latest checks pass on `f24509ae`: 55 successful checks,
one neutral review check, four skipped checks, and a successful legacy
security status. Both automated reviews are 5/5 on this exact commit.
- Prior-head CI failures are preserved: the Runner close fixture had
unconfirmed provider drain while suspension succeeded; its exact
fake-provider subprocess row passed locally with unchanged sources. The
browser outage test lost its title textarea before any outage write. A
bounded local control with a fully loaded composer passed every original
outage assertion. The prior failure is an editor-readiness race; its
exact asynchronous ordering remains unproved. No UI, browser-test, or
timeout change is included. Neither failure is counted as a pass or
silently discarded.
- The first `f24509ae` CI attempt had two interrupted jobs: Typecheck
and General server 9/12. Their logs record runner shutdown signals. The
server job also records lost runner communication. The same-head
failed-job rerun passed both jobs and the required aggregate. It reused
the other successful results. No source, test, or timeout change was
made for the rerun. The failed attempt remains preserved. Full
repository checks pass in CI; the local full repository typecheck, test,
and build commands were not repeated.
- No external model or provider calls are used by these checks.
Real-provider acceptance at this revision remains separate.

## Risks

- The new rejection uses the authenticated run and the server-owned
onboarding origin. Ordinary tasks, other blockers, empty-list
corrections, and already committed creation replay retain their existing
behavior. Blocker edits do not reapply the creation approval gate.
- Nonempty blocker edits perform two indexed identity reads; the task
lookup covers at most the run source and locked structural parent. Other
patches and empty-list corrections add no source lookup. The update
guard adds no parent row lock behind a child. Existing REST
authorization checkout and attempt auditing remain in place before the
domain mutation guard.
- The explicit input recipe guides the model. Schema and persistence
tests do not prove that a future model follows every instruction.
- The tool guidance changes the generated semantic catalog identity. The
maintained generated files are synchronized in this change.

## Model Used

OpenAI `gpt-6.1-sol` through Codex, with `ultra` reasoning effort,
repository tools, code generation, and test execution. The context
window is not exposed by the runtime.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used and stated the available runtime
detail
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have described the issue in-PR following the bug issue template
- [x] I have not referenced internal or instance-local Paperclip issues
or links
- [x] My branch name describes the change and contains no internal
ticket ID
- [x] I have run focused tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 10:57:31 -05:00
Nicky LeachandPaperclip 6d59f5ef7e fix: allow workspace changes after settled native bootstrap failures (#18166)
## Thinking Path

> - Paperclip manages work assigned to AI agents.
> - Workspace admission must wait for file persistence and execution
cleanup.
> - A native startup error can record a failed workspace finalization
before provider work starts.
> - The controller and environment can settle while that diagnostic
remains.
> - The workspace guard then blocks every later binding change.
> - This pull request recognizes settled bootstrap failures with no
output obligation.
> - Real output, process ownership, and cleanup obligations continue to
block changes.

## Linked Issues or Issue Description

Related: #14234 handles recovery-hold regeneration for legacy failures.
This change addresses the separate native workspace-finalization guard.

**What happened?**

A workspace change stayed blocked after two native startup failures.
Both runs had explicit bootstrap receipts with `providerWorkStarted:
false`. Their controllers were terminal and unowned. Their leases had
completed cleanup. No provider events or workspace copyback descriptors
existed. Each run still had a failed `workspace_finalize` diagnostic.
Later successful turns did not remove that historical record, so
selecting a task directory failed during setup on every retry.

**Expected behavior**

A confirmed startup failure with no provider work must not create a
permanent file-persistence barrier. A real workspace export or cleanup
obligation must remain fenced.

**Steps to reproduce**

1. Fail native session startup before provider work, leaving a failed
finalization diagnostic.
2. Settle the failed controller and its environment cleanup.
3. Schedule a different task workspace.
4. Start the next admission. Before this fix, it fails with “Previous
task run still owns workspace recovery.”

**Paperclip version or commit**

Reproduced against the workspace guard on master at `27be85904`.

**Deployment mode**

Hosted application with external PostgreSQL and a plugin-managed agent
computer.

## What Changed

- Exempt a failed finalization diagnostic only for finished native
bootstrap failures with an explicit no-work receipt and an unowned
terminal coordinator without a result.
- Keep provider events, process identities, restore failures, sync
descriptors, copyback owners, unfinished operations, and unsettled
environment cleanup as blockers.
- Reuse the existing batched provider-evidence reader.
- Test both pending workspace selection and legacy binding updates. Keep
the original failed operation unchanged.
- Document the admission invariant.

## Verification

- The new reproduction failed on both workspace-change paths before the
fix.
- `pnpm exec vitest run
server/src/__tests__/task-workspace-binding.test.ts`: 92 tests passed
after the fix.
- A first isolated test attempt needed the existing plugin SDK build
prerequisites. Tests ran after `pnpm --filter @paperclipai/plugin-sdk
ensure-build-deps`.
- `pnpm -r typecheck` and `pnpm build` pass with pnpm 9.15.4 and Rust
1.97.1. The initial typecheck attempt lacked Cargo on PATH; it was
corrected to use the installed toolchain. The unsharded local `pnpm
test:run` did not finish during the validation window and was stopped
after all PR CI test shards passed. It did not provide a completed local
full-suite verdict.
- Remote recovery used an audited, scoped transaction to append no-op
reconciliation records for the two verified bootstrap failures. Original
failures and workspace data were retained. The normal UI Retry then
applied the pending selection and reached native provider execution.
- Greptile reviewed commit `807d22be9e530e272d53def365a0cdd37bd142ea`:
5/5, with no review threads. All PR CI checks passed. GitHub reports no
merge conflicts.

## Risks

The main risk is misclassifying an unfinished workspace as a
startup-only diagnostic. The exemption requires positive no-work
evidence and rejects conflicting provider or output state. Existing
ownership and cleanup gates run first. Provider evidence adds one
batched database read only when eligible failed bootstrap diagnostics
exist. There is no new background work, migration, dependency, or
provider replay. Reverting this change restores the former guard.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, code execution, and browser
tools. This session does not expose a more specific model build ID or
context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 08:34:52 -07:00
b06ea111a2 fix(server): schedule skill cache retention from changes and saved deadlines (#17923)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/83/changes/paperclip/83
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The server caches saved skill versions on disk so runs can restore
their exact instructions.
> - The old retention owner scans company rows every hour, even after
all caches are protected or removed.
> - Cache publication, version changes, and pin release already have
local or transaction-owned boundaries.
> - Grace windows and terminal controller leases already have saved
timestamps.
> - This pull request uses those changes and deadlines to drive the
existing bounded prune service.
> - Idle retention stops SQL and directory reads while pending cleanup
remains recoverable.

## Linked Issues or Issue Description

Stack slice 64. Parent: #17876 (`codex/sleep-63-agent-timer-deadlines`).
Related: #15625 establishes transaction-owned work signals. #17907
independently keeps an active cache-lock transaction alive; this PR
preserves that lock and does not duplicate that repair.

**What happened?**

At parent `31c12f1d68ff4a51e06fc2be2abf2c2aee9f9d3a`, skill-version
retention has an hourly company scan, a startup timeout, and separate
continuation timers. Empty or permanently protected caches still cause
recurring SQL.

**Expected behavior**

Reconstruct once, inspect changed companies, and schedule saved
access/staging grace or terminal controller deadlines. Stop recurring
work when no timed or uncertain obligation remains. Keep
current/newest/agent/run protection, restorable-byte validation, cache
locking, final pin revalidation, atomic rename, and trash recovery.

**Steps to reproduce**

Start an enabled server with no cached versions, or only current/pinned
versions. After the initial scan, advance an hour. The old interval
selects companies again. The new worker has no deadline and performs no
retention SQL or directory scan in that state.

## What Changed

- Signal the missing-local-source reconciliation deletion in its
transaction. Limit fresh scans of a successfully observed company to one
per thirty seconds. Keep one-second page continuations and actual saved
deadlines independent. Empty or uncertain passes do not delay first
publication.
- Restart a company scan if drain interrupts inspection or post-rename
trash cleanup. Restore bounded candidate/byte logging with dry-run mode.
Three controlled cases failed before repair and the complete 34-case
retention suite passes afterward.
- Register retention through the delivery coordinator and shared
scheduler. Remove the hourly, startup, and continuation timers from
`index.ts`. Track startup work without delaying readiness. Stop delivery
work before closing retained iterators.
- Keep one active company cursor and bounded 50-entry passes. Preserve
observed deadlines across pages and bound company discovery to 51 rows
per page. Retain concrete company failures and incomplete pins for
retry.
- Report saved grace and terminal controller deadlines from the existing
cache owner. PostgreSQL remains the controller-lease authority.
Current/newest/agent pins do not arm unrelated lease checks.
- Wake on cache publication, rejected materialization, and access
markers. Signal version creation/deletion and agent configuration/hire
changes in their owning transactions. Extend existing instruction,
finalization/environment, and retained-session fanouts with company
hints.
- Route reused provider-task prior-owner retirement through
`writeEnvironmentCleanup`, so that supported pin-release write also
settles a notification.
- Add an optional scope callback to `registerDeadlineWork`. Existing
consumers omit it and keep their behavior. The feature owns persistence
predicates; startup only registers it. Add no table or migration.

Full producer audit, shared-contract explanation, lifecycle evidence,
and limitations:
[`doc/plans/2026-10-27-skill-version-retention-sleep-audit.md`](doc/plans/2026-10-27-skill-version-retention-sleep-audit.md).

## Verification

- Reconciled all existing sleep changes with actual master
`7e27bc5007c8f9cb8cdce06c24f9813e27f7120f` through normal merges. All 24
retention-owned and 95 unrelated upstream paths are preserved; package,
UI, E2E and map trees equal master.
- Combined-source qualification: **1,009 TypeScript cases across 42
complete files**, plus **28 Rust cases** in two targets. One intentional
Linux-inotify-only adapter case is skipped on this macOS host. Coverage
includes actual retention/cache/producer/runtime behavior, startup,
shared deadline consumers, changed OpenCode/observability and native
execution boundaries.
- After the subsequent task-index/task-read upstream merges, **85 cases
across six complete files** passed on final source
`d9277b1858a2230bdb726974c90a0c9bc5c5ebe6`: real retention/cache/work,
task reads/query behavior and concurrent migration repair. Counts
overlap earlier coverage. Fresh PostgreSQL 17 schemas apply all 413
journal entries through index 414.
- Database/adapter/Runner builds, production server and Runner
typechecking, module boundaries, target migration order and generated
TypeScript/Rust release-profile consistency pass. Selected source hashes
and temporary fixture imports restore exactly.
- Reproduced and repaired Greptile's own-company due-cleanup P2 with
identical old-worker-failing/new-worker-passing assertions. The
30-second ordinary scan floor remains; already-due cleanup receives its
owed scan and disarms afterward. Earlier 799-case and fresh-blank-plugin
acceptance remain in the audit.
- **Inherited validation exception:** the separate Copilot
source-identity check fails after upstream OpenCode reserved-environment
changes; all 72 identity inputs equal current master. No provider
release attestation is regenerated or new live qualification claimed
here. Required exact-head CI/security and Greptile 5/5 still must pass.
- Historical results, repair details and limitations remain in [the
retention
audit](doc/plans/2026-10-27-skill-version-retention-sleep-audit.md). No
full local repository-suite, live provider, production-load,
external-alarm, measured suspend/wake or fleet-savings claim.

- CI on the prior published head found four connection-review assertions
racing the concealed conversation after reload. Its fresh
Greptile/Ponytail reviews were both 5/5, but the failing browser gate
was not waived or retried unchanged. The fixture now foregrounds the
task tab and waits for visible history before retaining all existing
saved-result assertions. The full file passes four journeys locally; the
controlled-restart case is intentionally skipped by the default
configuration. Original local journeys also passed unchanged, so no
deterministic local red reproduction is claimed. See the audit for CI
failure artifacts and scope. Runtime and prior sleep-test sources remain
unchanged.

## Risks

- Supported live writers are the existing service/API owners in one
process. Independent SQL/FS writers need an ingress contract. Startup
reconstruction covers restarts.
- Notifications cause a bounded inspection; they do not authorize
deletion. Durable pin predicates and the cache lock remain
authoritative.
- A database clock behind application time can require another
one-second check of the concrete expired controller lease. Unknown pins,
lock contention, and failed inspection retain retries until resolved.
- The in-process scheduler cannot wake stopped compute. This PR
preserves Cloud sleep-safety gates and external-alarm coverage. It does
not prove deployed suspension or fleet savings. Cache reclamation can
wait until a supported wake when compute is stopped.
- Native-harness backup retention and the other remaining duties are
separate stack slices.

## Model Used

OpenAI Codex (GPT-6-based coding agent), using repository inspection,
normal Git merges, composition proofs, a controlled red/green regression
and complete PostgreSQL/filesystem integration suites. No subagents were
used in this reconciliation.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Codex <noreply@openai.com>
2026-10-29 10:14:12 -05:00
DottaandPaperclip 27fbdb2a74 perf(workspaces): reuse verified seeds across task branches (#18159)
## Thinking Path

> - Paperclip manages AI agents and their workspaces.
> - Remote runs stage a recoverable copy of the selected host workspace.
> - New tasks use separate workspace IDs and Git branches.
> - The verified seed cache currently treats those identities as
different content.
> - This causes repeated clones and seed verification when task files
and Git commits are identical.
> - This pull request shares immutable seed content within a company and
applies each task's branch to a private archive.
> - It also removes credential broker calls for two local Git snapshot
commands.

## Linked Issues or Issue Description

**What happened?**

New remote tasks rebuild the same Git seed under different workspace IDs
and branches. In a measured staging run, preparation took 29.7 seconds.
Git clone took 6.1 seconds and optional seed publication took 7.8
seconds. Publication overlapped the 4.4-second transfer, so those values
cannot be added. Local `diff-files` and `write-tree` commands also
request GitHub credentials.

**What did you expect?**

Reuse a verified seed when filesystem contents, Git HEAD, origin, and
nested repository layout match. Preserve each task's branch, recovery
archive, ignored files, and copyback behavior. Keep local snapshot
plumbing independent of GitHub credential capture.

**Steps to reproduce**

1. Configure a remote native environment and a Git project workspace.
2. Create two tasks from the same source commit with different task
branches and workspace IDs.
3. Inspect the workspace preparation spans. Both tasks currently clone
and publish the same seed content.

**Paperclip version and deployment mode**

Reproduced on Core `25f1070fbdabd96b26cdf199e624a77905f3ca37`, with a
managed remote sandbox and native Runner. The local comparison used a
public repository at a fixed commit with roughly 13,000 entries.

Refs #17886, #16398, #16399, #17357. The Git launcher extension builds
on Jamie Buchanan's work in #17886. The other PRs establish the seed
verification, recovery, and eviction contracts preserved here. A search
found no open PR for sharing these verified seeds across task branches.

## What Changed

- Use a company-scoped cache bucket for native host-current preparation.
Keep the existing bucket and company storage limits and eviction rules.
- Remove branch names from the shared generation identity. Keep file
contents, Git HEAD, origin, and nested layout in that identity. Keep the
default workspace-scoped identity unchanged for other callers.
- Store a detached Git archive in the shared cache. Copy it and append
the selected branch metadata before upload and private per-run
persistence. Existing durable-seed replay can read the private archive
without the new cache option.
- Forward the scope through the execution target and both
command-runtime paths.
- Treat `diff-files` and `write-tree` as local Git commands. Network
commands, unknown commands, and managed commit identity keep their
existing credential path.
- Test new workspace IDs, named and detached branches, nested
repositories, dirty and ignored files, symlinks, recovery, corrupt
caches, refused publication, and copyback.

## Verification

- Current head `6087bac274d50804d1b332646e43f3b8d41d798f`: 53 checks
passed, two optional checks skipped, Greptile 5/5, no unresolved review
threads. Linux CI passed.
- Adapter-utils TypeScript 7.0.2 typecheck passed.
- Server package typecheck passed, including its Runner and plugin build
prerequisites.
- 140 seed-cache, seed-reuse, and sandbox-runtime tests passed after
rebasing.
- 44 Git launcher and command-runtime tests passed after rebasing.
- 30 native workspace preparation, warm history, and
retention-configuration tests passed. All 56 retention tests also passed
(5.72 seconds) after repairing missing library aliases inside the
installed macOS Postgres package. That local dependency repair changed
no repository source. The earlier startup timeouts occurred before test
assertions.
- The new seed reuse regression failed before the change because the
second branch cloned again. It passes through the execution target and
both command-runtime paths after the change.
- Clean local preparation comparison: two alternating measured pairs,
with an existing verified company seed and new task branches. Baseline:
19.63 and 9.85 seconds. Shared cache: 5.18 and 4.80 seconds. Median:
14.74 to 4.99 seconds. Each baseline cloned and published; each
shared-cache run skipped both. Branch and file checks passed. The
complete comparison loop took 58 seconds.
- The comparison used real Git, archives, snapshot workers, and local
file transport. It used no model calls. It does not establish a complete
staging response time. The first generation still pays the cold
preparation cost.

## Risks

- A shared cache hit requires an identical generation that is still
present. The company bucket retains the existing 16-generation/1 GiB
bucket limit; busy companies may miss more often.
- The branch binding appends entries to a private tar archive. Tests
cover the host platform; Linux CI must also pass before merge.
- A cache miss, corruption, or capacity refusal must retain the private
recovery path. Existing tests exercise those cases.
- Git plumbing can still encounter repository-specific filters or
missing objects. This extends the existing local-command policy by two
commands; it does not grant network credentials to them.
- The latest measured real staging reply took 77.8 seconds. This change
targets a bounded part of that path and does not claim the
under-15-second response goal is met.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning and repository tools. The
session does not expose the exact model revision or context window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 09:19:23 -05:00
DottaandPaperclip 7e27bc5007 fix(tasks): keep anchored opens compact and stabilize saved cards (#18092)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Task pages must make the current instruction and recent conversation
readable quickly.
> - Compact startup avoids reading all earlier messages and run
activity.
> - Every URL fragment previously selected the full-history path, even
for documents.
> - Saved document cards also arrived after the conversation was
visible. PR statistics could add another row later.
> - This pull request keeps anchors compact and reveals the saved
conversation structure together.
> - The benefit is stable reading position without loading unrelated
history.

## Linked Issues or Issue Description

Related: #17593 introduced compact startup. #14667 covers earlier reveal
and scroll work. This fix retains the bounded history contract.

**What happened?**

Opening a task document link loaded all task history. Ordinary cold
opens could reveal messages before saved document cards and plans
arrived. Later PR metadata added a statistics row and changed card
height.

**Expected behavior**

Every URL fragment keeps compact startup. Document links open their
pane. Older-comment links fetch only the target comment. Saved cards
keep their geometry after first reveal.

**Steps to reproduce**

1. Create a task with many comments, a saved plan, documents and saved
PR work products.
2. Delay the enriched task response and open the task. Observe cards
inserted after messages appear.
3. Open a document fragment. Observe full comment, activity and run
reads.
4. Delay PR metadata refresh. Observe each card grow when diff counts
arrive.

## What Changed

- Remove fragment and tab checks from automatic history expansion.
Resolve validated comment UUIDs through the authorized single-comment
endpoint, encode their path components, retain fetched targets across
document navigation, and preserve cancellation/deletion cache updates.
- Include the saved plan, document metadata and local work-product
projection in the core task read. Skip recovery, workspace and
related-task enrichment. Do not refresh providers. Summary queries no
longer select other document bodies.
- Seed saved work-product and plan queries from core, including already
pending or errored reads, without replacing known lists or an
authoritative empty result. Coordinate the bounded recent reads, saved
cards, latest transcript and settled initial pane width before first
reveal. Keep the thread and composer mounted during refresh and explicit
expansion.
- Open continuation summaries in the document pane. Reserve PR
statistics geometry while provider metadata loads.
- Add a reusable synthetic local task, nine browser checks, frame
measurements and video. Extend the PostgreSQL core-route fixture with a
saved PR row and assert its identity, URL, state and stored metadata
survive the response. Update design guidance and capability maps.

## Verification

- Red: visible document/plan cards changed from 0 to 1 to 4; thread
height grew from 690 to 1,432 pixels. Green: all seven saved cards
appear before reveal, with constant thread height and zero per-card
movement in the final reviewed browser run. The final 1,492-pixel layout
includes the reserved PR statistics lines.
- Red: delayed PR diff counts changed all three cards from 62 to 82
pixels. Green: their heights stay at 82 pixels before and after metadata
refresh.
- Nine browser journeys pass: delayed enrichment,
document/comment/unknown/continuation anchors, document clicks and
explicit history expansion with a retained draft, missing-comment retry,
delayed PR statistics, and retained older-comment position after
document navigation.
- 583 focused UI tests passed on `c91fa107ba`. After the plan-cache
follow-up, all 212 affected page/cache/plan-hook tests and UI typecheck
pass, including 14 plan-hook cases. The original 16 focused PostgreSQL
tests passed for the server changes.
- Merge-review red: holding the duplicate stored work-products read
blocked the first reveal past 10 seconds despite core already containing
the saved cards. Both empty and populated core projections now reveal
while that request remains pending. Malformed-comment tests prove no
target request is made; API tests prove path encoding and abort-signal
forwarding.
- The populated core-route test now inserts a real saved PR work product
alongside the plan and documents, then checks the complete saved
projection through HTTP. All ten task cold-open PostgreSQL tests pass.
- Plan-cache review red: an existing pending or errored plan query
prevented the saved core plan from reaching the consumer. Four real-hook
cases failed before the data-presence fix and pass afterward, for both
present and absent plans. A separately fetched newer plan or known
absent plan remains authoritative.
- Further layout red: the initial properties pane reduced visible thread
width from 775 to 742 pixels after reveal. The reveal now waits for two
stable width frames; the browser check includes width, height, card
counts and per-card geometry.
- `pnpm -r typecheck` and `pnpm build` passed for the original change;
UI typecheck and build pass after review fixes. Token, module-boundary
and map checks pass. `pnpm test:run` was stopped after about 15 minutes
in the serialized server lane. No full local test-suite pass is claimed.
On the earlier head, hosted build/typecheck and all Vitest lanes passed;
one E2E shard failed because the agent-configuration clipboard helper
copied page text into its YAML parser. On `c91fa107ba`, Greptile was 5/5
and every E2E shard passed, including the earlier clipboard case. One
unchanged Discord chat-binding test in server shard 8 returned false
after 185 ms; its 16-test integration file passes locally without
changes. The CI cause remains unestablished. On `be436ce492`, both
server shard 8 and E2E shard 7 passed without changing those tests or
their product code. On final head `e357b3bced`, all CI jobs pass,
including full general and serialized tests, all eight E2E shards,
typecheck, build and the aggregate verification gate. Exact-head
Greptile is 5/5 with no findings. The overall status rollup contains 55
successes, two intentionally skipped Storybook checks and a neutral
Paperclip Review. That advisory review ended without a complete
assessment; all previously posted findings are resolved and it added no
current findings.
- Test startup exceeded an initial 5-second deadline once while
development assets and other checks were active. The final browser
checks allow 10 seconds. These runs establish geometry and bounded
requests; they do not establish a reliable latency improvement. An
initial 503 error fixture exercised global reconnect/backoff. The
target-comment failure test uses a terminal 404.
- Browser data is synthetic. Provider metadata is simulated for the
delayed-response check. No staging deployment or live provider execution
is claimed.

## Risks

- Core task reads now include local saved-card queries and the saved
plan body. Other document bodies and all historical run activity remain
outside that path.
- First reveal waits for the bounded current structure. The existing
15-second incomplete-history fallback and inline retry remain available.
- Continuation-summary links open in the document pane in the current
task interface. Classic tasks keep their existing surface.
- No migration or mutation permission change.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, code editing, shell tools
and browser testing. The exact serving model ID and context-window size
are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 09:13:01 -05:00
DottaandPaperclip 2a6d4d1694 perf(db): index canonical task activity lookups (#18043)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/177/changes/paperclip/177
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip helps people manage AI agents and their tasks.
> - Task lists rank tasks by their latest canonical activity.
> - The existing lookup reads every event for each task before
pagination.
> - Query-only alternatives failed a narrow visibility control or the
performance goal.
> - This PR adds an index that lets the unchanged lookup stop at the
newest qualifying event.
> - The result is less history work with the same permissions, ordering,
and response.

## Linked Issues or Issue Description

Refs: #13803. That broader proposal stores a new activity field with
triggers and a backfill. This index was authored independently and uses
the existing query.

**Subsystem affected**

Task-list activity ranking and the database schema.

**Current behavior**

The list computes `MAX(activity_log.created_at)` for every eligible
task. The existing entity index reads 50 events per task across 1,199
candidates in the representative fixture.

**Proposed behavior**

Add `(company_id, entity_type, entity_id, created_at)`. Keep the
production task service and permission helpers unchanged. PostgreSQL
reads backward until an event passes the existing exclusions.

**Reason and benefit**

Fresh paired measurements on the current base improve the
full-description scoped SQL from **44.60 to 20.33 ms (2.19×)**. Activity
buffer accesses fall from **63,547 to 4,796**, and history rows per
probe fall from 50 to one. The complete service median falls from 50.63
to 31.31 ms. Complete positional SQL results and service responses
match.

## What Changed

- Add generated migration `0414_closed_edwin_jarvis.sql` and the
matching Drizzle index.
- Use `CREATE INDEX CONCURRENTLY IF NOT EXISTS` through the existing
top-level runner and invalid-index retry cleanup. The client change is
one whitelist entry.
- Preserve all upstream SQL and journal entries; retain snapshots
0410–0414.
- Cover full and index projections, canonical ordering, invalid-index
recovery, concurrent migrators, and incomplete fixture rejection.
- Repair benchmark seeding, apply requested work memory to both
connections, and record both settings. Hosted defaults now include six
Slack conversations, 642 GitHub conversations, and 53 removed
conversations.

## Verification

- **All final-head CI gates passed**, including full workspace
typechecks, tests, build, Runner checks, and all eight E2E shards.
Greptile is **5/5** on `67ca7ae1cf15fc054ef515ffd8205b1fe30a0d55`; no
unresolved review threads remain.
- Local database/server typechecks and migration numbering/safety checks
pass. Three server regression tests and three migration regression
suites pass on real PostgreSQL.
- The original pre-index work guard fails at eight rows per probe; the
indexed guard now checks both the full-description query and index
projection. The service oracle covers cleanup/inbox exclusions, raw text
IDs, company scope, comments, ties, sort directions, visibility before
pagination, empty lists, and one child per parent.
- The documented pre-index seed command reproduced the review failure
before the fix and now succeeds. A paired run with non-default memory
confirms both independent connections use `16MB`.
- Fresh proof pins pre-index base
`929e840595c8933ca485ac7a2e99413e1e11ca64`, with identical cloned data,
unchanged generated SQL and parameters, two warmups, and five
alternating samples per arm. All **18 comparison cells** preserve every
positional row and complete service response. The 15-case default-memory
matrix passes its physical-work, speed, and control bounds.
- The one-visible-task control is 6.64 → 7.25 ms SQL; the 20-task
control is 3.71 → 3.72 ms. Both pass the declared 25% or 2 ms budget.
Full-query memory controls use matching `4MB` or `16MB` settings.
- Committed 1,000-row write batches measured 40.09 → 43.17 ms median
(+7.7%). Ranges overlap (34.67–71.85 and 34.27–48.05 ms); this is an
observed local cost, not a precise throughput guarantee.
- The final-numbered migration builds a valid index through the normal
runner on the fresh 300,000-row fixture in 0.55 s. Earlier large-fixture
proof of the same index SQL used 5,000 tasks and 1.25M activity rows:
2.58 s first apply, concurrent write/read probes 5.16/2.43 ms,
interrupted invalid-index cleanup, successful retry, and one receipt.
Current migration recovery tests verify the renumbered path.
- [The proof
document](https://github.com/paperclipai/paperclip/blob/67ca7ae1cf15fc054ef515ffd8205b1fe30a0d55/docs/performance/task-list-activity-index.md)
retains the historical baseline, rejected rewrites, and the earlier
matrix invalidated by severe host contention. Those historical timings
are not substituted for the fresh measurements above.

## Risks

The migration is an exception after measured query-only alternatives
failed. The index adds storage and work to every activity write: about
30 MiB for 300,000 rows and 123 MiB for 1.25M rows. Concurrent creation
avoids the writer blocking observed with an ordinary index build, but
long transactions can delay it. Local timing does not establish Neon
build duration.

The query still ranks all eligible tasks, and excluded newer events
still need to be skipped. These are local SQL/service measurements;
deployed HTTP latency remains unverified. No hosted DDL or deployment
was performed.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, code execution, and tool
use. The environment does not expose the exact model identifier or
context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either linked existing issues or described the issue using
the relevant issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links
- [x] My branch name describes the change and contains no internal issue
id
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 09:06:41 -05:00
ba07f85cad perf: schedule agent timers from durable deadlines (#17876)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/58/changes/paperclip/58
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Agent timers must start due work and preserve queue admission rules.
> - The server woke their scan on every heartbeat interval, even with no
eligible timer.
> - Idle scans keep the database and instance active.
> - This pull request derives the next deadline from saved policy and
work records.
> - Supported producer transactions notify the shared coordinator when
eligibility changes.
> - An idle timer worker stops scanning and resumes when real work or a
deadline requires it.

## Linked Issues or Issue Description

Refs #17863. This is slice 63 of the recurring-work migration and
follows the merged issue-monitor deadline PR.

Related: #16632 changes timer issue scope; #16881 changes live-run
eligibility. This PR preserves the current admission policy. Those
policy changes are separate work. A future time-sensitive predicate must
expose its next transition deadline.

**What existing behavior does this improve?**

Agent timer heartbeat scheduling in the server.

**Current behavior**

A recurring heartbeat wakes the timer scan even when companies are
paused, timers are disabled, or no actionable task exists.

**Proposed behavior**

Register the earliest eligible interval or positive daily-cap reset
deadline. Re-read on supported producer commits and startup. Leave no
recurring database scan when no timer obligation remains.

## What Changed

- Keep policy and deadline calculation in the heartbeat queue.
Scheduling retains company, reporting-chain, worktree, and CAS gates.
- Use the existing deadline coordinator. Remove only the timer wake from
the server heartbeat loop.
- Notify before existing transaction writes that change eligibility or
deadlines. Cover configuration, lifecycle, company budgets, task
ownership, recovery, conversations, accounting corrections, and
completion.
- Use the lifecycle status-change hook for saved hire rejection. Cover
checkout's second adoption transaction after an initial failed CAS.
- Preserve pending work through idle and maintenance drains. Check
cancellation between due agents. Reconstruct on restart.
- Document the supported writer model and producer inventory. Add no
schema, table, or provider branch.

## Verification

- **1,710 passing cases across 49 complete files**, no skips, on
accepted source `32db86c1974dcbf794f01a8c5e42024e2ad071fc`. Coverage
includes real timer policy/CAS/producers, monitor and shared deadline
consumers, native reconstruction, Slack lifecycle,
skills/settings/configuration, queue isolation and agent lifecycle.
- Database build, production server typechecking/build, module
boundaries, target migration order and Runner profile identity pass.
Twenty-nine fresh PostgreSQL 17 schemas plus per-file fixtures applied
all 412 journal entries through index 413; all selected source hashes
and temporary fixture imports were restored exactly.
- Four new deadline composition cases verify future/overdue timing,
minimum scan spacing and disarming. A controlled mutation dropping only
the inherited continuation option fails; the composed source passes with
identical assertions and timers.
- Normal parent reconciliation preserves task-drain expiry and both
deadline contracts. The final monitor-parent publication changes only
its audit, preserving every qualified runtime and selected test source.
- Historical failures and review corrections remain in [the timer
audit](doc/idle-agent-timers.md). No full local repository-suite, live
provider, measured suspend/wake, external-alarm or fleet-savings claim.
Final-head CI/security, exact-head Greptile 5/5 and actionable Ponytail
findings remain separate merge gates.

## Risks

- Process-local notifications cover supported service/API writers in one
server process. Direct SQL and independent replicas need an explicit
ingress contract. Startup reconstruction is not live cross-process
notification.
- Notifications can batch for up to the configured heartbeat interval.
Known deadlines retain their scheduler path; failed reconciliation
retains bounded retry.
- Enabled timers without an actionable-work requirement remain real
recurring obligations. Zero caps require policy changes; positive
reached caps use UTC midnight.
- The timer fixture substitutes adapter enqueue. Existing admission
tests also pass, but this is not deployed provider or sleep
qualification.
- Cloud does not gain legacy agent timer alarms in this PR. Existing
sleep-safety blockers remain. No database/host suspension or fleet
savings claim is made.
- Parent-stack CI and review must pass before merge. This PR does not
authorize merging its dependencies.

## Model Used

OpenAI Codex (GPT-6-based coding agent), using repository inspection,
normal Git merges, composition proofs, a controlled red/green regression
and complete PostgreSQL integration suites. No subagents were used in
this reconciliation.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Codex <noreply@openai.com>
2026-10-29 08:58:27 -05:00
DottaandPaperclip b81b870732 Add QA smoke journeys and OpenCode run traces (#18098)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Product E2E journeys verify saved application behavior across
deployments.
> - Task creation and questions need reusable smoke selections and exact
run attribution.
> - Operators also need to inspect the OpenCode execution behind a
measured question.
> - Company observability does not currently support native OpenCode.
> - This change adds the journeys and a bounded projection of normalized
OpenCode run events.
> - The projection follows the configured capture policy and retains the
current run identity across warm reuse.

## Linked Issues or Issue Description

Related foundation: #17262. Related alternative: #17989 exports metadata
from OpenCode's native OTLP stream. This change uses normalized run
events to support the existing content switches and per-run linkage. It
does not forward the native stream. The two PRs overlap in launch
registration and must be reconciled before both land.

**What existing behavior does this improve?**

Reusable Product E2E smoke selections and company observability for
native OpenCode.

**Current behavior**

The journey catalog lacks reusable task creation and attached-agent
question checks. Native OpenCode is marked unsupported for company
observability, so a successful destination connection test does not
prove that agent traces will appear.

**Proposed behavior**

Add explicit task-create and ask-question selections. Verify saved state
and exact company, issue, agent, model, environment and successful run
attribution. Export normalized OpenCode turns, tools and usage to the
configured OTLP destination. Honor each capture switch and redact known
secrets.

**Reason and benefit**

CI can run a small measured smoke selection, retain its screenshots and
checks, and link results to traces belonging to the same run.

**Breaking changes**

Existing selectors remain unchanged. OpenCode export is opt-in through
existing company settings. Legacy OpenCode stays unsupported.

## What Changed

- Add reusable task creation and question journeys, configured-agent
capability, owned-fixture checkpoints and strict evidence validation.
- Add an OpenCode-owned projection of normalized run events. No provider
SDK or raw payload schema enters heartbeat coordination.
- Extend the private launch union and reserved environment allowlist for
native OpenCode. With export disabled, no receiver request runs.
- Keep destination headers in the parent wrapper and out of the actual
provider child environment and configuration.
- Bound each turn to 64 tool and 64 usage entries, 8 KiB per text field
and a 1 MiB request. Use a three-second request deadline, four
concurrent exports, and no retries or idle worker.
- Pass the rotated runner authority to each proxy turn. A retained
process no longer attributes later turns to its original launch run.
- Update settings copy, observability documentation and capability maps.

## Verification

- `pnpm -r typecheck` and `pnpm build` passed after the implementation
changes.
- Adapter launch/redaction: 9 tests passed. Projection and actual proxy:
12 tests passed before the review fix; the expanded projection suite
passed all 12 cases after the fix. The proxy test exercises two runs in
one process against a real local HTTP receiver and a fake provider.
- Full OpenCode driver/projection suite: 72 passed, one existing
response_wake test timed out at five seconds. A focused check then
passed both existing omitted-continuation cases and the new trace export
case. The timeout cause remains unconfirmed.
- Runner package TypeScript and Rust `cargo check` passed. Map and UI
token checks passed.
- Prior journey validation: 273 tests across 12 files and the journey
TypeScript check passed.
- Broad local `pnpm test:run` encountered native-runtime integration
failures with repeated embedded PostgreSQL initialization failures and
was stopped. All 16 failing cases passed in an isolated run outside the
filesystem sandbox (961 unrelated cases unselected). The broad local run
is not a clean acceptance result. A later focused database-backed
chat/heartbeat run passed all six selected observability cases,
including native OpenCode launch and successful allocation (1,809
unrelated cases were unselected).
- All CI gates passed for `21085f880d8babc9efeb22d0623db99613d33093`,
including packaged-runner, clean-install, browser and build checks:
https://github.com/paperclipai/paperclip/actions/runs/40884658995 .
Greptile reviewed the same commit at 5/5 with no unresolved findings.
- Verified OTLP JSON acceptance and indexing with an explicitly
synthetic transport marker. No live OpenCode model trace or deployed
smoke acceptance is claimed yet.

## Risks

Export is best effort. Abrupt termination, recovered in-flight turns
without a new submitted event, limits or receiver failure can lose
traces. Export failure does not change task success. The projection
represents observed normalized events, not raw native model spans or
hidden reasoning. Known-secret redaction is not an OS isolation
boundary. UI changes can break journey locators. Deployment adapters
retain credential, ownership and cleanup responsibility. Both the
controller and native runner bundle must be updated before live
qualification.

## Model Used

OpenAI Codex, GPT-6, with reasoning, code execution and browser tools.
The exact serving model ID and context size are not exposed to this
session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass (targeted suites; broad
local limitation documented above)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 08:57:12 -05:00
DottaandPaperclip 7d8d1fbc1d fix(adapter-utils): provide a default author for local commits (#18094)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/209/changes/paperclip/209
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Agents use managed launchers for Git and GitHub commands.
> - These launchers exclude host credentials and host Git identity.
> - A checkout without an author cannot save a local commit when managed
GitHub identity is absent.
> - A local author default belongs in the launcher that owns this
isolation.
> - This pull request supplies a private Paperclip default and preserves
explicit and managed identity selection.
> - Agents can save local work without manual author setup or extra
GitHub access.

## Linked Issues or Issue Description

**What happened?**

An ordinary `git commit` fails with `Author identity unknown` in a fresh
checkout without author settings or a usable managed GitHub identity. An
agent must set its own author to continue.

**Expected behavior**

The managed launcher supplies a default local author. Repository and
command settings override that default. A current managed identity
retains its existing precedence.

**Steps to reproduce**

Run the managed launcher in a fresh Git repository without author
settings or broker credentials. Add a file, then run `git commit -m
work`.

**Paperclip version or commit**

Reproduced at `063cfd43813cabf18417605fb9eefb9aacf95c8d` on Linux with
Node 25.9.0 and pnpm 9.15.4.

**Deployment mode**

Managed sandbox execution. The shared launcher also serves local and SSH
execution that selects managed access.

Related: #16662 changes precedence for a connected GitHub account. #8945
assigns identity to managed worktrees. This repair supplies the missing
anonymous launcher default and keeps the current managed precedence. It
does not require either change.

### Hypothesis and thesis for a fix

**Hypothesis:** The launcher removes inherited author variables and host
Git config. Without a broker identity or explicit repository settings,
it has no author. Four real-Git cases reproduce the reported error on
the base revision.

**Thesis for a fix:** Put `Paperclip <noreply@paperclip.ing>` in a
private Git config for each operation. Git treats it as global config,
so repository and command settings can override it. The existing broker
environment still takes precedence. Do not store a person's identity in
shared checkout config, where it could remain after steering or
revocation. The default grants no GitHub access.

## What Changed

- Write the default author to the existing private operation directory
with mode `0600`. Remove it when the operation exits.
- Point managed Git at this file while keeping host global/system
config, credentials and SSH identity excluded.
- Add real-Git regressions for missing, absent, unavailable and rejected
access. Preserve explicit overrides, identity changes and revocation
controls.
- Verify two shell commits through normal launcher staging and a commit
after anonymous heartbeat cleanup. Check saved files, commit metadata
and temporary config cleanup.
- Update identity documentation and the two run map recipes.

## Verification

- Red: the four new local-commit cases fail on the base launcher with
`Author identity unknown`.
- Green: all 80 focused tests pass in one run across
`github-launcher.test.ts`, `github-launcher-environment.test.ts`,
`heartbeat-github-launchers.test.ts` and `native-github-access.test.ts`
(23.31 seconds).
- A controlled filesystem failure first made the candidate discard valid
managed credentials. After the correction, the same real launcher
process retains them. Default-author file failure does not change
operation-directory readiness.
- Review found a second failure: a partial write can leave invalid Git
config. The real-process test failed before the repair with `fatal: bad
config line` from `git status`. The launcher now selects the default
file only after the write succeeds. Both write-failure cases retain
managed credentials, allow status, require identity when no default is
available, and save a commit with explicit identity. The test reads the
stored commit metadata with real Git.
- Real shells, generated launchers and Git create and inspect saved
commits. Sandbox transport and broker replies use controlled fixtures.
No live cloud rollout or GitHub write acceptance is claimed.
- The isolated test process excludes inherited task launcher paths, Git
config and broker authentication variables. An initial run exposed those
test-environment inputs; the isolated replay passed. The heartbeat
assertion now checks the private default file and its cleanup instead of
expecting `/dev/null`.
- Adapter-utils typecheck and build pass. Map validation and `git diff
--check` pass.
- Conflict repair on 2026-10-29: merged master
`fa5e70faf47ef2ca20bf2daf95b7503c94469b89` into the PR branch. Resolved
19 conflict paths by retaining master for unrelated files. All seven Git
identity files remain byte-for-byte equal to the reviewed fix. The final
diff is seven files, 145 additions and 15 deletions.
- At head `c501e3f28369d404c91082b89188dc150c9362a9`, all 80 focused
tests pass again (37.53 seconds). Adapter-utils typecheck and build
pass. Map validation and migration checks pass. The PR diff passes `git
diff --check`.
- Full workspace typecheck and build were attempted again. Both stop
because this sandbox has no Rust `cargo`. The duplicate full local
Vitest run was stopped after about five minutes without a final result
while full CI was running. The earlier full local attempt was stopped
without a final result. No local full-suite pass is claimed.
- GitHub now reports the PR as mergeable. All current-head checks have
completed. [Full CI run
40878973679](https://github.com/paperclipai/paperclip/actions/runs/40878973679)
passes, including typecheck, build, Rust, test shards and all eight E2E
shards. The exact-head check inventory has 54 successes, one neutral
Paperclip Review and two Storybook skips. Snyk passes. Greptile and
Paperclip each reviewed `c501e3f28369d404c91082b89188dc150c9362a9` at
5/5 with no actionable findings. All review threads are resolved. GitHub
reports the PR as clean and mergeable.
- The prior CI run had one failed E2E test: `a lost creation response
requires reload and cannot blindly replay commands`. Its YAML parser
received page text that starts with `Skip to Main Content`. The new run
passes E2E shard 7/8 and the full E2E gate. The prior failure remains
part of this record. A passing run does not establish the earlier
failure's cause. This change does not alter that test or the agent
configuration UI.

## Risks

- Commits without explicit or managed identity now use the generic
Paperclip author. Operators can still set repository or command
identity.
- `git config --global` writes to temporary operation config and does
not persist. The documentation states this behavior.
- If the private config directory cannot be prepared, commits still need
explicit identity. Existing redacted diagnostics and credential
isolation remain.
- One small synchronous file write is added to a directory the launcher
already creates. No new subprocess, network request, persistent identity
or authority cache is added.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

OpenAI Codex, based on GPT-6, with reasoning, shell execution and tool
use. The runtime does not expose the exact model ID or context window
size to this agent.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 08:56:12 -05:00
0f6f0a3fee fix(server): schedule issue monitors without heartbeat polling (#17863)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/56/changes/paperclip/56
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Issue monitors save a future check on an existing issue.
> - The heartbeat timer still scans monitors on every tick, even when
none are due.
> - The saved deadline and claim already provide durable scheduling
state.
> - This pull request gives monitors their own deadline worker and
connects state changes to it.
> - Idle monitor work stops querying. Existing admission and recovery
rules remain in force.

## Linked Issues or Issue Description

Refs #17840, #16325. Related: #17171 addresses rearming a monitor after
its admitted run fails. This PR changes when monitor inspection runs and
follows the merged routine prerequisite.

**What existing behavior does this improve?**

Issue-monitor scheduling and idle database use.

**Current behavior**

Heartbeat ticks call the combined agent and monitor sweep. The existing
next-deadline query only retains future monitors. Polling covers overdue
leftovers, stale claims, and changes that make a saved monitor eligible.

**Proposed behavior**

Use the shared deadline worker. Retain overdue work with bounded
retries. Wake after committed changes to monitor state, issue
eligibility, company state, or native ownership. Keep legacy agent ticks
separate for the next slice.

## What Changed

- Add monitor-specific sweep and deadline methods to the existing
scheduling owner. Keep the manual combined method.
- Include overdue work and the strict five-minute claim fence. Exclude
active native owners until their state changes.
- Register monitors with the shared deadline worker. Heartbeat ticks
wake only the legacy agent timer worker.
- Connect direct issue-state writers and existing execution-control
notifications to monitor work. Checkout uses a short transaction around
its existing CAS. Provider work stays outside it.
- Add real database lifecycle tests and retain routine, startup,
admission, execution-control, and native-projection coverage.
- Record the obligation, producer inventory, recovery behavior, and
limits in `doc/plans/2026-10-27-issue-monitor-sleep-audit.md`.

## Verification

- **1,233 passing cases in 35 complete files**, no skips, on accepted
source `c24aadfc91e9394d73c799f9e05fc67202160557`. Coverage includes
real monitor scheduling/admission, native settlement, committed
producers, retained routines and all shared deadline consumer
integration suites.
- Database build, production server typechecking/build, module
boundaries, target migration order and Runner profile identity pass.
Twenty-four fresh PostgreSQL 17 schemas plus per-file fixtures applied
all 412 journal entries through index 413; every selected source hash
and temporary fixture import was restored exactly.
- Normal parent reconciliation preserves master's admitted-wake result
and scoped issue deletion while keeping committed monitor notifications.
All other paths match the automatic merge; packages remain byte-exact to
the qualified parent. The final routine-parent publication changes only
its audit.
- Historical failures and corrections remain in [the monitor
audit](doc/plans/2026-10-27-issue-monitor-sleep-audit.md). Old
delegated-Slack rate and Runner drain CI failures are retained; the
current inherited clock fixture and package source are byte-identical to
merged #17835. Fresh final-head CI remains required.
- No full local repository-suite, live provider, deployed suspend/wake,
external-alarm, production-load or fleet-savings claim. Final-head
CI/security, exact-head Greptile 5/5 and actionable Ponytail findings
remain separate merge gates.

## Risks

- A missing producer notification can strand a monitor after polling is
removed. The audit covers ordinary writes, direct status/assignment
writers, recovery, and native ownership changes.
- The writer model is process-local. Independent SQL writers and other
replicas need a supported notification or reconciliation contract.
- Overdue work uses the configured heartbeat interval as a retry floor
for the monitor worker. New notifications during that backoff wait for
its next pass. Normal state-change bursts coalesce for one second.
- Notification fanout can inspect monitors during other active work. An
unchanged idle subsystem has no recurring monitor scan.
- The legacy agent timer still polls. Cloud sleep proofs and external
alarm coverage are unchanged.

## Model Used

OpenAI Codex (GPT-6-based coding agent), using repository inspection,
ordinary Git merges, composition proofs, PostgreSQL fixtures and
complete local integration suites. No subagents were used in this
reconciliation.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Codex <noreply@openai.com>
2026-10-29 08:40:56 -05:00
929e840595 fix(server): schedule routines without heartbeat polling (#17840)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/47/changes/paperclip/47
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Routines create work at saved cron deadlines.
> - The heartbeat still wakes the routine worker when nothing is due.
> - Its old next-deadline query also drops overdue work left by capped
catch-up.
> - Removing the heartbeat alone can strand that work and miss company
reactivation.
> - This pull request uses saved deadlines and committed producer
changes.
> - Idle routine scheduling stops querying until a change, retry, or
real deadline.

## Linked Issues or Issue Description

Refs #16514. Merged prerequisite: #17836. Related Cloud wake contract:
#16215.

**What happened?**

Every heartbeat wakes the routine scheduler. The next-deadline query
excludes overdue triggers. A 27-tick hourly backlog loses its deadline
after the first 25-run pass. Company and budget lifecycle changes also
lack routine schedule signals.

**Expected behavior**

Use the actual next saved deadline. Retain overdue work. Refresh after
supported producer transactions commit. Keep idle schedules quiet
between obligations.

**Steps to reproduce**

1. Create an hourly routine with capped catch-up and 27 overdue ticks.
2. Run the registered worker once. The base processes 25 ticks and
reports no next wake.
3. Create a future schedule and pause or reactivate its company. The
base does not refresh its registered deadline until another wake.

## What Changed

- Remove only the routine worker wake from the heartbeat tick.
- Put routine eligibility and the next-deadline read in
`routineService`. Include overdue triggers. Keep trigger/routine company
scope consistent and require an active company.
- Reuse `registerDeadlineWork` for retries, request generations, and
passive drain behavior. Narrow its coordinator type to the `register`
method it uses. Existing consumers keep the same runtime behavior.
- Signal routine work from manual schedule invocation, company
pause/resume/archive/delete, and budget-induced company pause/resume.
Existing routine and trigger producers retain their transaction signals.
- Stop between trigger batches during drain/shutdown. Finish a claimed
batch so its advanced timestamp does not discard admitted work.
- Add real PostgreSQL lifecycle tests and extend startup/query fixtures.
Add a validated external database option to the company suite, including
migrations and client closure.
- Record producer coverage and limits in
`doc/plans/2026-10-27-routine-schedule-sleep.md`.

## Verification

- **417 passing unique cases across 14 complete files**, no skips, on
accepted source `4659ef76d398193b15e7812d4a97f3da3b743226`. Coverage
includes the real deadline worker, database eligibility queries, routine
services/HTTP/routes/plugins, budget/company producers, git/device
fixtures, startup and shared coordinator.
- The first combined run passed 416 cases and had one UUID HTTP
authorization timeout at its unchanged 20-second limit. One fresh
complete 13-case E2E diagnostic passed (the affected case took 425 ms).
No assertions, timeouts or production source were changed; the initial
timeout's cause is not established.
- Database build, production server typechecking/build, module
boundaries, target migration order and Runner profile identity pass.
Fresh PostgreSQL 17 fixtures applied all 412 journal entries through
index 413; all selected test hashes and temporary fixture imports were
restored exactly.
- Normal parent merges preserve the tested production and test source.
Historical acceptance and review corrections remain in [the routine
audit](doc/plans/2026-10-27-routine-schedule-sleep.md).
- No full local repository-suite, deployed suspend/wake, external alarm,
live provider or fleet-cost claim. Final-head CI, security, exact-head
Greptile 5/5 and actionable Ponytail findings remain separate merge
gates.

## Risks

- Company pause now prevents due routine claims, matching the prior
deadline query. Rows remain saved for reactivation. Existing routine
reactivation, project-pause skip records, cron, timezone, catch-up, and
concurrency policies remain with the routine owner.
- Signals cover supported service writers in one process. Independent
SQL writers and other replicas need their own integration.
- This proves worker quiet, not host/database suspension or fleet
savings. Cloud idle proof and external wake coverage are unchanged.
- Issue-monitor and legacy-agent-timer polling remain separate duties.
This slice does not finish the full migration stack or its CI/review
work.

## Model Used

OpenAI Codex (GPT-6-based coding agent), using repository inspection,
ordinary Git merges, source-composition proofs, PostgreSQL fixtures and
local lifecycle tests. No subagents were used in the current
reconciliation.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Codex <noreply@openai.com>
2026-10-29 08:08:04 -05:00
fa5e70faf4 fix(server): schedule automatic backups through shared lifecycle (#17836)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/39/changes/paperclip/39
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip manages agent work and its durable state.
> - Automatic database backups protect that state on a configured
schedule.
> - Their independent interval is outside the shared deadline and
shutdown lifecycle.
> - An enabled backup schedule owes real work even when no queue
changed.
> - The existing coordinator can own this deadline without another table
or notification protocol.
> - This change preserves backup policy and moves scheduling into that
shared lifecycle.

## Linked Issues or Issue Description

Refs: #17835. Related work: #11756 (abortable backups), #3549
(stale-backup catch-up), #2120 (interval unref), #16364 (bounded
shutdown steps). This slice changes scheduling; it does not implement
those separate features.

**What existing behavior does this improve?**

Automatic database backup scheduling and shutdown ownership.

**Current behavior**

A standalone interval invokes backups, skips drain and warm standby, and
is not registered with the shared work scheduler. Its future deadline is
invisible there. The interval is not cleared or joined by the delivery
coordinator during shutdown.

**Proposed behavior**

Register the configured backup deadline with the shared coordinator.
Call the existing backup owner only when due. Keep the startup-relative
phase, skip missed slots, retain the next interval after failure or a
busy-owner skip, and join active scheduled work on shutdown.

**Reason and benefit**

One scheduling lifecycle owns overlap, admission, deadlines and
shutdown. Waiting does not query the database. This is a true periodic
obligation, so enabled backups still recur; it is not an empty-queue
polling removal or a claim of measured savings.

This existing slice now follows the merged import-spool parent #17835
and targets master. Merge authorization and exact-head CI/review gates
are tracked separately.

## What Changed

- Add a small backup scheduling owner using the existing coordinator and
scheduler.
- Replace the automatic-backup interval in startup. Register only when
backups are enabled, independently of heartbeat scheduling.
- Preserve the existing backup executor, manual serialization, retention
reads, pre-sleep verification, restart marker and host-sleep gates.
- Test deadlines, drain/standby, failures, busy-owner skips, slow
attempts, restart and shutdown. Update startup-marker tests to exercise
the registered deadline.
- Record the audit and update inventory item 15. No schema or backup
format changes.

## Verification

- Current source acceptance: **130 passing cases in four complete
files**, no skips: backup worker, startup checkpoints, scoped deadline
work and delivery coordinator. Database build, production server
typechecking/build, module boundaries, target migration order and Runner
profile identity pass.
- Runtime and all four selected test sources are byte-identical to
accepted source `11775eee7ed795b989cbb31052e69643c468c3cf` after normal
parent reconciliation. The parent carries the tool-access test-order
repair; it changes no backup behavior.
- Historical broader checks and the real JavaScript backup/restore
probe, including their intermediate failures and limits, remain in [the
backup audit](doc/plans/2026-10-26-database-backup-sleep-schedule.md).
They are not claimed as repeated current-head acceptance.
- No full local repository-suite, deployed suspend/wake, pg_dump, live
provider or cost-savings claim. Final-head CI, security, Greptile 5/5
and any actionable Ponytail findings remain separate merge gates.

## Risks

- Enabled backups still require periodic database and disk work. This
change centralizes the deadline; it does not reduce backup frequency or
establish deployed cost savings.
- The backup engine has no AbortSignal contract. Coordinator stop joins
an active scheduled backup, so a stalled backup can delay graceful
shutdown. Bounded backup cancellation remains separate work.
- Restart still starts a new ordinary interval; it does not replay
historical slots. The existing pre-sleep marker still requests an
immediate verified restart backup and persists on failure.
- A due backup waits during drain or standby and retries on the next
coordinator attempt after admission reopens, within one configured
interval.
- The internal deadline is not a persisted Cloud alarm. Existing
scheduled-backup and checkpoint sleep gates remain unchanged. The real
probe qualifies the JavaScript engine only, not pg_dump or deployed
shutdown latency.

## Model Used

OpenAI Codex (GPT-6-based coding agent). Repository inspection, ordinary
Git merges, source-composition proofs and local lifecycle tests were
used for this reconciliation. No subagents were used in the current
merge campaign.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes:` / `Closes:`
/ `Refs:` OR (b) described the issue in-PR following the relevant issue
template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub URLs)
- [x] My branch name describes the change and contains no internal
Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Codex <noreply@openai.com>
2026-10-29 07:55:53 -05:00
1bceae0c91 Make import spool cleanup wake on changes and saved deadlines (#17835)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/38/changes/paperclip/38
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip manages agent work and the files that support it.
> - Resumable company imports keep uploaded parts until apply or expiry.
> - An hourly cleanup loop reads the database for every retained upload
directory.
> - Failed and applying imports can retain files without owing periodic
cleanup.
> - Existing transfer rows and file timestamps already identify real
deadlines.
> - This change schedules those deadlines and wakes cleanup after
relevant changes.

## Linked Issues or Issue Description

Refs: #17801.

**What problem does this solve?**

The hourly import sweep keeps querying retained uploads when no cleanup
is due. It also treats a failed database read as a missing transfer row.
That can cause deletion of a live upload whose directory is old.

**What is the proposed solution?**

Use the existing delivery coordinator with per-transfer deadlines. Keep
commit-aware notifications in the transfer ledger service. Keep
filesystem change notifications in the spool owner. Recover pending
cleanup from existing files and rows at startup.

**What alternatives have you considered?**

A slower periodic sweep would still query idle history. A new job table
would duplicate the existing ledger and directory timestamps. Retrying
only after successful uploads would miss partial file writes that leave
cleanup work.

This is slice 59. Parent #17801 has merged. This publication targets
master and preserves that landed prerequisite. Fresh current-head CI and
review remain required.

## What Changed

- Repair an inherited CI concurrency test. Observe exact PostgreSQL
blockers instead of assuming lock order from two 50 ms sleeps. Keep
production authorization and all fail-closed assertions unchanged.

- Refresh verified-upload activity before writing bytes. Preserve the
guarded cleanup claim without recording a part receipt before the file
exists.

- Isolate unreadable child directories so healthy cleanup continues. Use
unique, self-cleaning route fixtures for external database reruns.

- Replace the hourly timer with the existing scoped deadline worker. No
new table or independent scheduler.
- Schedule open uploads at saved activity time plus 24 hours, preserving
the strict cutoff and guarded cancellation before deletion.
- Keep failed and applying imports quiet while retaining their files.
Clean completed/cancelled leftovers immediately.
- Register run-scoped write intent before every supported ledger
mutation, including nested transactions. The helper stays inside the
existing ledger owner.
- Wake from filesystem changes, including failed writes and removals.
Reconstruct orphan deadlines from directory timestamps after restart.
- Propagate database and permission errors. Only a missing directory
proves absence. Read only the four ledger fields needed for cleanup.
- Preserve startup-only stranded-apply recovery. The cleanup worker
cannot fail live applies. Remove its filesystem subscription and join
active cleanup on shutdown.
- Record producer coverage and limits in
`doc/plans/2026-10-26-import-spool-cleanup-sleep.md`.

## Verification

Current repair source: `5d974e5eb28fc3e28b5e75e36fb18c61582348d5`. The
publication adds a test-fixture repair and audit text to the previously
tested import-spool source; runtime code is unchanged. **765 distinct
cases pass across nine complete files:** the original 293 consumer cases
remain hash-identical, and the full tool-access file passes all 472 in
20.86 seconds.

Controlled evidence: a 500 ms cleanup-query delay fails all three old
timing cases; observed lock barriers pass all three with the same delay
and unchanged policy assertions. The artificial delay is not committed.
Current-head CI's original audience-race failure is preserved. The first
local full-file run also retains one separate 15-second stdio HTTP
timeout; one fresh diagnostic full run passes all 472, without
establishing that timeout's cause or changing its limit. Fresh CI and
reviews are required on this new publication head.

Accepted production source: `87549234b125464dc7fa216227fc9bfa1d93f3d7`.
Publication head: `016b3af51a734ad0ddf574de701679a7bdc33d06`. Adopting
the actual parent squash preserves the complete accepted child tree. The
subsequent changes are the CI test fixture and its audit text.

- **293 cases pass across eight complete server files, with zero
skips:** spool worker 18; HTTP import transfers 25; transfer ledger 9;
cloud floor 8; portability 114; startup 92; coordinator 26; scoped
deadlines 1. Runtime: 12.28 seconds.
- Real filesystem and PostgreSQL cases cover zero idle SQL/directory
scans, actual deadlines, first/concurrent writes, nested
commit/rollback, restart, failure, drain/resume, root and symlink
boundaries, and joined shutdown. Three fresh PostgreSQL 17 fixtures and
isolated PAPERCLIP_HOME keep the run separate. All eight source hashes
remain exact; no assertion, timeout, or source adaptation.
- **Static gates pass:** database build; server typecheck/build; module
boundaries; migration order; profile identity. All 412 migration journal
entries are present through index/tag 0413_tired_kronos.
- **Composition:** 1,237 parent-only and eight owned-only paths remain
exact; 11,521 identical paths and two automatic shared production
results are preserved. The only manual conflict is the status ledger.
Packages and other native worker services equal the parent. Its 4,192
selected cases are prior source-scoped evidence, not added to this
count.
- **Historical failures remain recorded:** earlier trusted-runner and
Greptile service errors are not current passes. The older Ponytail Ship
verdict names another head. Fresh CI, security, and exact-head Greptile
5/5 must pass before merge.
- [Master integration and spool acceptance
audit](https://github.com/paperclipai/paperclip/blob/016b3af51a734ad0ddf574de701679a7bdc33d06/doc/plans/2026-10-26-import-spool-cleanup-sleep.md#current-master-integration-and-spool-acceptance-2026-10-29).
No full local repository, live provider, or deployed sleep claim is
made.

<details><summary>Earlier revision verification and failure
history</summary>

Receiver failure fairness: a controlled 1,100 ms batch reproduced a
30-second delay for healthy due receivers. The worker now supplies its
existing per-item deadline through `nextRunAtOnError`. All 20 receiver
lifecycle tests pass on the owner and combined tip
`31c12f1d68ff4a51e06fc2be2abf2c2aee9f9d3a`; server production
typechecking passes on the owner. The failed receiver retains its own
backoff, and settled receivers return to zero recurring SQL. The
five-second assertion budget is unchanged. See [the owning
audit](https://github.com/paperclipai/paperclip/blob/7435a19f6d18f14466175d72b3b7d893ed39acd0/doc/plans/2026-10-25-chat-receiver-discovery-sleep-audit.md#healthy-receiver-progress-after-a-slow-failed-batch).
Current-head CI and review remain required.

Approved delegated Test-tab calls now evaluate caller and target
policies in the existing claim transaction. Real HTTP regressions first
showed a missing caller charge and shared-limit self-rejection. All 78
connection-management cases and 92 gateway cases now pass on the owning
branch, along with server production typechecking. All 78
connection-management cases also pass at combined tip
`d25f830db89c1623bff3547bfc68015c1c66e0cf`. The three new cases cover
shared charges, separate charges, rollback on denial, duplicate
approval, and rejection of a later authorized call. Intermediate
counter/identity fixture failures and a reused-database Slack collision
are recorded in [the owning
audit](https://github.com/paperclipai/paperclip/blob/1509a56a97f2ffb2ab59a9a27f6d7be16ab46569/doc/idle-approved-tool-recovery.md#delegated-test-tab-admission-after-policy-changes).
The earlier combined checks below remain evidence for their stated
revisions. Current-head CI and review remain required.

Inherited voice-cleanup verification: the controlled slow-provider
regression and all 13 lifecycle tests passed on its owner and combined
tip `ab22d8ed0c09028315607414b83b375e5cc0a60a`. That repair changed only
the fixture clock advancement and its audit note.

Current head: `7435a19f6d18f14466175d72b3b7d893ed39acd0`. This remains a
single-duty PR stacked on #17801.

- Integrated pinned master `8548173fc9efdc0fa07644fb92dcc0b6851a95e5`
with normal merges. Every branch passed generated-schema checks and its
target-branch migration-order gate. Existing SQL is unchanged; the 25
stack migrations follow master’s new migration.
- Duty-specific producer coverage, lifecycle tests, and earlier failure
records:
[2026-10-24-recurring-server-sleep-stack.md](https://github.com/paperclipai/paperclip/blob/47ba0a93c4b01484ad58d16bbeb5a372c76b5a0d/doc/plans/2026-10-24-recurring-server-sleep-stack.md),
[2026-10-26-import-spool-cleanup-sleep.md](https://github.com/paperclipai/paperclip/blob/47ba0a93c4b01484ad58d16bbeb5a372c76b5a0d/doc/plans/2026-10-26-import-spool-cleanup-sleep.md).
- Combined tip `51e6cbe67979b55b340ea9f0f434c5b5c682ccd6`: **355
startup/cancellation/recovery/dispatch/preservation tests**, **75
connection-management tests**, and production server typechecking pass.
These combined checks do not mean every intermediate PR independently
ran the full repository suite.
- Real master-to-stack database upgrade passes: **379 unchanged prior
migration receipts plus 25 new migrations**, with the gateway
responsibility fixture preserved.
- Owning-branch checks: 84 runner installation/settlement cases plus
runner typechecking and generated TypeScript/Rust profile agreement; 253
GitHub review workflow cases. Stop-attribution and held-worker readiness
regressions failed before their fixes.
- Failure accounting: the initial combined run passed 349 cases and
failed six idle assertions in a reused preservation database containing
old cancelled runs. Repeating the combined command with a fresh
preservation database passed. Earlier invalid project selection, merge
import/type errors, and the interrupted full local suite are not counted
as passing checks.
- **Latest-head CI and review remain required.** Prior CI findings
include GitHub idle observation, route teardown, attention cleanup,
touch-picker E2E, workspace health, and voice-cleanup timing; local
passes do not erase those failures. No full local repository-suite,
deployed sleep, fleet cost, or live Copilot qualification claim is made.


</details>

## Risks

- Expiry and active apply must keep their guarded ledger claims. A stale
read must never authorize file deletion after a concurrent resume.
- Database and permission failures remain unresolved work. They cannot
be interpreted as missing rows or empty directories.
- Only supported ledger and spool owner writers emit these local
notifications. Independent processes or SQL writers need ingress;
startup recovery alone cannot wake stopped compute.
- Cloud sleep blockers remain. No deployed suspension, external alarm
coverage, live provider qualification, or cost savings is claimed.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, code execution, real
PostgreSQL and filesystem tests, and GitHub tools. The exact runtime
model identifier and context-window size are not exposed in this
session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes:` / `Closes:`
/ `Refs:` OR (b) described the issue in-PR following the relevant issue
template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub URLs)
- [x] My branch name describes the change and contains no internal
Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Codex <noreply@openai.com>
2026-10-29 07:42:14 -05:00
c8b7afee06 fix(server): schedule native environment lease settlement (#17801)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/24/changes/paperclip/24
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip manages AI agents and the resources used by their work.
> - Native run completion has several independent settlement duties.
> - The recurring run reaper repeated environment-release discovery for
completed native history.
> - Existing lease rows already record releases that still need work.
> - This pull request wakes the existing release owners from committed
changes and schedules only unfinished release debt.
> - Completed history becomes quiet while stop evidence, workspace
preservation, and retention policy keep their existing owners.

## Linked Issues or Issue Description

Refs: #17793, #17717.

**What problem does this solve?**

Periodic native finalization replay calls environment release even when
no lease needs work. This adds recurring database traffic to an idle
instance.

**What is the proposed solution?**

Register one scoped worker on the existing delivery coordinator.
Discover work from native finalizations and existing environment leases.
Wake it from native, lease, and settings transactions. Keep the release
owner's saved pending-cleanup deadlines. Keep retries only while a
concrete lease still needs settlement.

**What alternatives have you considered?**

A slower unconditional scan still queries idle history. A new job table
duplicates existing lease truth. Replacing the compound callback would
also change runtime-service and agent-status duties; those remain
separate slices.

This is slice 58. Parent #17793 has merged. This publication targets
master and preserves that landed prerequisite. Fresh current-head checks
and review remain required.

## What Changed

- Keep ordinary company-only finalization hints out of environment
settlement. Prove zero candidate SQL after quiet and preserve real lease
delivery.

- Reuse the existing durable destroy claim for run-owned cleanup,
excluding concurrent attempts and fencing late receipts while preserving
cleanup recovery.

- Scope lease cleanup notifications to their company/run so settlement
does not rediscover the entire backlog after each release.

- Read only `nativeWorkspaceSync` and `workspaceExportRetry` JSON fields
when discovering environment cleanup. Preserve saved run data and
existing release decisions.

- Reuse the environment runtime's release predicate for discovery. Add
no table or independent timer.
- Wake from existing finalization, projection, lifecycle, recovery,
lease, and settings transaction boundaries. Simple lease acquisition now
uses a transaction too.
- Preserve recorded retention policy, pending-cleanup deadlines,
original lease/provider ownership, and current release guards.
- Re-read durable lease state after a release. A logged or swallowed
per-lease failure does not discharge the obligation.
- Delegate only periodic environment release. Preserve default
live/manual behavior, runtime-service release, and agent-status
callbacks.
- Add an owner/producer/lifecycle audit and real database tests.

## Verification

Accepted production source: `9596fa022b57feea026c4728c80bdc36037b804f`.
Publication head: `fb252c8b0e52ce355e7d98db2e392e4831f99c61`. The actual
parent squash is adopted by a normal merge with the complete accepted
child tree unchanged. Only audit text follows.

- **4,172 distinct cases in 64 complete server files pass**, plus **20
selected chat cases** (4,192 selected total). The main batch reports
3,440 passes and 49 skips. Both complete Stop/read files then pass 51 +
6 cases on separate fresh databases through their supported override.
Their eight pure cases are counted once; skipped cases are never counted
as passes. Separate process recovery passes 410; review response passes
273. The other 1,794 chat cases were not run locally.
- **Quiet producer proof:** the controlled unscoped baseline fails with
three candidate SELECTs after three routine company-only hints. The
scoped case performs zero, releases a real eligible committed-run lease,
and returns to quiet. The same test hash spans red and green.
- **Static gates pass:** database build; server typecheck/build; module
boundaries; migration order; current Copilot profile identity. Packages
equal the accepted parent byte for byte.
- **Fresh fixtures:** 39 prepared PostgreSQL 17 databases plus fresh
helper-owned databases. The schema has all 412 journal entries through
index/tag 0413_tired_kronos. All 65 original test hashes restore
exactly; the indirect Stop fixture is also hashed. No assertion or
timeout changes.
- **Preserved records:** original 49 skips and their completed coverage
remain documented. Parent handoff timeout and prior chat-idle failure
records remain in their owning audits. This does not claim full
repository, full chat, live provider, or deployed sleep acceptance.
- [Current integration and native lease
audit](https://github.com/paperclipai/paperclip/blob/fb252c8b0e52ce355e7d98db2e392e4831f99c61/doc/plans/2026-10-26-native-environment-settlement-sleep.md#current-master-integration-and-native-lease-quiet-proof-2026-10-29).
Fresh CI, security, and exact-head Greptile 5/5 must pass before merge.

<details><summary>Earlier revision verification and failure
history</summary>

Receiver failure fairness: a controlled 1,100 ms batch reproduced a
30-second delay for healthy due receivers. The worker now supplies its
existing per-item deadline through `nextRunAtOnError`. All 20 receiver
lifecycle tests pass on the owner and combined tip
`31c12f1d68ff4a51e06fc2be2abf2c2aee9f9d3a`; server production
typechecking passes on the owner. The failed receiver retains its own
backoff, and settled receivers return to zero recurring SQL. The
five-second assertion budget is unchanged. See [the owning
audit](https://github.com/paperclipai/paperclip/blob/6f3a0b8de149fb5620f15909473eb7c4455b9824/doc/plans/2026-10-25-chat-receiver-discovery-sleep-audit.md#healthy-receiver-progress-after-a-slow-failed-batch).
Current-head CI and review remain required.

Approved delegated Test-tab calls now evaluate caller and target
policies in the existing claim transaction. Real HTTP regressions first
showed a missing caller charge and shared-limit self-rejection. All 78
connection-management cases and 92 gateway cases now pass on the owning
branch, along with server production typechecking. All 78
connection-management cases also pass at combined tip
`d25f830db89c1623bff3547bfc68015c1c66e0cf`. The three new cases cover
shared charges, separate charges, rollback on denial, duplicate
approval, and rejection of a later authorized call. Intermediate
counter/identity fixture failures and a reused-database Slack collision
are recorded in [the owning
audit](https://github.com/paperclipai/paperclip/blob/ae9bff1c06e34702f64a399e58b45a657c133bd1/doc/idle-approved-tool-recovery.md#delegated-test-tab-admission-after-policy-changes).
The earlier combined checks below remain evidence for their stated
revisions. Current-head CI and review remain required.

Inherited voice-cleanup verification: the controlled slow-provider
regression and all 13 lifecycle tests passed on its owner and combined
tip `ab22d8ed0c09028315607414b83b375e5cc0a60a`. That repair changed only
the fixture clock advancement and its audit note.

Current head: `6f3a0b8de149fb5620f15909473eb7c4455b9824`. This remains a
single-duty PR stacked on #17793.

- Integrated pinned master `8548173fc9efdc0fa07644fb92dcc0b6851a95e5`
with normal merges. Every branch passed generated-schema checks and its
target-branch migration-order gate. Existing SQL is unchanged; the 25
stack migrations follow master’s new migration.
- Duty-specific producer coverage, lifecycle tests, and earlier failure
records:
[2026-10-24-recurring-server-sleep-stack.md](https://github.com/paperclipai/paperclip/blob/7e619453567e078a7d745f28bfe8e5ede571f282/doc/plans/2026-10-24-recurring-server-sleep-stack.md),
[2026-10-26-native-environment-settlement-sleep.md](https://github.com/paperclipai/paperclip/blob/7e619453567e078a7d745f28bfe8e5ede571f282/doc/plans/2026-10-26-native-environment-settlement-sleep.md).
- Combined tip `51e6cbe67979b55b340ea9f0f434c5b5c682ccd6`: **355
startup/cancellation/recovery/dispatch/preservation tests**, **75
connection-management tests**, and production server typechecking pass.
These combined checks do not mean every intermediate PR independently
ran the full repository suite.
- Real master-to-stack database upgrade passes: **379 unchanged prior
migration receipts plus 25 new migrations**, with the gateway
responsibility fixture preserved.
- Owning-branch checks: 84 runner installation/settlement cases plus
runner typechecking and generated TypeScript/Rust profile agreement; 253
GitHub review workflow cases. Stop-attribution and held-worker readiness
regressions failed before their fixes.
- Failure accounting: the initial combined run passed 349 cases and
failed six idle assertions in a reused preservation database containing
old cancelled runs. Repeating the combined command with a fresh
preservation database passed. Earlier invalid project selection, merge
import/type errors, and the interrupted full local suite are not counted
as passing checks.
- **Latest-head CI and review remain required.** Prior CI findings
include GitHub idle observation, route teardown, attention cleanup,
touch-picker E2E, workspace health, and voice-cleanup timing; local
passes do not erase those failures. No full local repository-suite,
deployed sleep, fleet cost, or live Copilot qualification claim is made.


</details>

## Risks

- Existing lease owners retain destruction claims, provider identity,
stop evidence, retention policy, and pending-cleanup deadlines.
Incorrect changes here can release a live resource or lose a cleanup
obligation.
- Logged or swallowed release failures remain concrete debt. Real
retries must retain their saved floor across unrelated hints.
- In-process signals do not cover independent SQL or other replicas
without ingress.
- This delegates only periodic environment settlement. Runtime-service
and agent-status duties remain separate. Existing Cloud blockers remain;
no deployed sleep, database suspension, external alarm coverage, or cost
savings is claimed.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, code execution, real
PostgreSQL tests, and GitHub tools. The exact runtime model identifier
and context-window size are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes:` / `Closes:`
/ `Refs:` OR (b) described the issue in-PR following the relevant issue
template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub URLs)
- [x] My branch name describes the change and contains no internal
Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Codex <noreply@openai.com>
2026-10-29 06:37:48 -05:00
829f9e7eaf fix(server): settle Muse terminal assignments from committed changes (#17793)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/12/changes/paperclip/12
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Its external-agent module owns Muse assignments, operation receipts,
and worker holds.
> - Running assignments and retained terminal history must not cause an
empty maintenance scan every five seconds.
> - Terminal run changes and operation results already have durable
database transactions.
> - This pull request wakes the existing maintenance worker from those
commits and reconstructs work at startup.
> - The worker retries only concrete settlement debt. It retains
qualification deadlines and authority checks.

## Linked Issues or Issue Description

Refs: #17772. This is slice 57. Parent #17772 has merged.
Related: #17000, #17525, #17752, #17758. The publication targets master
and preserves the merged parent.

**What existing behavior does this improve?**

Muse terminal assignment settlement and the existing Muse maintenance
worker.

**Current behavior**

A running assignment can keep maintenance scanning every five seconds.
Terminal reconciliation rewrites unchanged history. Native finalization
also calls that reconciliation during periodic replay. Discovery
excludes a revoked original binding even when its assignment still needs
settlement.

**Proposed behavior**

Committed run changes and operation receipts wake the existing worker
with the original company, run or binding identity. Startup reconstructs
actionable work from existing rows. Maintenance processes bounded
batches and disarms after settlement. Default live and manual callbacks
remain. The periodic callback delegates this one duty.

**Reason and benefit**

Configured but idle instances stop querying for this obligation. Late
receipts, restarts, drain and historical bindings still have recovery
paths. No table or independent timer is added.

**Breaking changes**

No schema, endpoint or provider protocol changes. Explicit manual
reconciliation retains its unbounded default. This does not alter Cloud
sleep admission or claim that all instance work can sleep.

## What Changed

- Add an owner predicate shared by discovery and locked settlement.
Fenced private-worker uncertainty remains held without an automatic
retry loop.
- Preserve original binding generation and company/agent/run identity,
including revoked bindings. Fence only the terminal assignment during
reconciliation.
- Extend existing maintenance with scoped hints, bounded batches,
concrete-debt retry, startup reconstruction and quiet drain behavior.
- Register notifications inside existing terminal, projection,
cancellation, operation-result and send-failure transactions. Keep
qualification and OAuth signals explicitly global when coalesced with
scoped changes.
- Serialize only four domain IDs. Real native-finalizer tests caught and
prevent a circular-object serialization failure at this boundary.
- Use existing restore/worktree suppression and settings reactivation.
Delegate both periodic finalizer branches while retaining resource
callbacks and default live/manual settlement.
- Add the producer audit and regression evidence in
`doc/plans/2026-10-26-muse-terminal-settlement-sleep.md`.

## Verification

Accepted production source: `584015018ed4a9d57d2b0f192b75847503b54e53`.
Publication head: `305014b030d6c5eb891c70bc57036f4192d4fdad`. Normal
adoption of the actual parent squash preserves the complete accepted
child tree. Only audit text, a migration-count clarification, and the
proved Photon test extension follow.

- **3,715 distinct cases in 52 complete server files pass**, plus **20
selected chat cases** (3,735 selected total). The main 49-file batch
passes 3,008; process recovery passes 410; review response passes 273;
the full Photon file passes 24. The other 1,794 chat cases were not run
locally.
- **Quiet producer proof:** moving only the Muse fanout outside its
parent guard produces six candidate SELECTs and fails the regression.
Keeping the guard yields zero and still settles a real terminal run. The
same test hash spans the controlled red/green pair.
- **Photon review evidence:** repeated active callbacks produce zero
settlement hints/candidate SQL. Three concurrent attention recoveries
produce exactly one of each. The existing locked attention guard was
correct; production needed no fix. The parent security check accepted
the resolved finding before merge. This PR keeps the additional
settlement queue in the existing regression.
- **Static checks pass:** database build; server typecheck/build; module
boundaries; migration order; current Copilot identity. Packages equal
the accepted parent byte for byte. No new live provider qualification is
claimed.
- **Fixtures and failures:** 34 fresh PostgreSQL 17 fixtures have 412
applied migration receipts through tag 0413_tired_kronos, plus fresh
per-call helper fixtures. All 52 original test hashes restore exactly.
The additional Photon test hash matches its passing proof. Earlier
remote chat passive-idle failure remains recorded; both passive/missing
cases pass in the new selection. Parent handoff timeout/fresh-file-pass
accounting remains in its audit. No assertion or timeout was weakened.
- [Integration and quiet producer
audit](https://github.com/paperclipai/paperclip/blob/305014b030d6c5eb891c70bc57036f4192d4fdad/doc/plans/2026-10-26-muse-terminal-settlement-sleep.md#current-master-integration-and-quiet-producers-2026-10-29).
Fresh CI, security, and exact-head Greptile 5/5 must pass before merge.

<details><summary>Earlier revision verification and failure
history</summary>

Receiver failure fairness: a controlled 1,100 ms batch reproduced a
30-second delay for healthy due receivers. The worker now supplies its
existing per-item deadline through `nextRunAtOnError`. All 20 receiver
lifecycle tests pass on the owner and combined tip
`31c12f1d68ff4a51e06fc2be2abf2c2aee9f9d3a`; server production
typechecking passes on the owner. The failed receiver retains its own
backoff, and settled receivers return to zero recurring SQL. The
five-second assertion budget is unchanged. See [the owning
audit](https://github.com/paperclipai/paperclip/blob/f7477933469fdc960f555425dce66eff25a94e54/doc/plans/2026-10-25-chat-receiver-discovery-sleep-audit.md#healthy-receiver-progress-after-a-slow-failed-batch).
Current-head CI and review remain required.

Approved delegated Test-tab calls now evaluate caller and target
policies in the existing claim transaction. Real HTTP regressions first
showed a missing caller charge and shared-limit self-rejection. All 78
connection-management cases and 92 gateway cases now pass on the owning
branch, along with server production typechecking. All 78
connection-management cases also pass at combined tip
`d25f830db89c1623bff3547bfc68015c1c66e0cf`. The three new cases cover
shared charges, separate charges, rollback on denial, duplicate
approval, and rejection of a later authorized call. Intermediate
counter/identity fixture failures and a reused-database Slack collision
are recorded in [the owning
audit](https://github.com/paperclipai/paperclip/blob/bbd31dea5ef3a4875950a87b4636af8b6bde858e/doc/idle-approved-tool-recovery.md#delegated-test-tab-admission-after-policy-changes).
The earlier combined checks below remain evidence for their stated
revisions. Current-head CI and review remain required.

Inherited voice-cleanup verification: the controlled slow-provider
regression and all 13 lifecycle tests passed on its owner and combined
tip `ab22d8ed0c09028315607414b83b375e5cc0a60a`. That repair changed only
the fixture clock advancement and its audit note.

Current head: `f7477933469fdc960f555425dce66eff25a94e54`. This remains a
single-duty PR stacked on #17772.

- Integrated pinned master `8548173fc9efdc0fa07644fb92dcc0b6851a95e5`
with normal merges. Every branch passed generated-schema checks and its
target-branch migration-order gate. Existing SQL is unchanged; the 25
stack migrations follow master’s new migration.
- Duty-specific producer coverage, lifecycle tests, and earlier failure
records:
[2026-10-24-recurring-server-sleep-stack.md](https://github.com/paperclipai/paperclip/blob/ff196791db6dada2dc04ea9db0d58c5c3beb4a41/doc/plans/2026-10-24-recurring-server-sleep-stack.md),
[2026-10-26-muse-terminal-settlement-sleep.md](https://github.com/paperclipai/paperclip/blob/ff196791db6dada2dc04ea9db0d58c5c3beb4a41/doc/plans/2026-10-26-muse-terminal-settlement-sleep.md).
- Combined tip `51e6cbe67979b55b340ea9f0f434c5b5c682ccd6`: **355
startup/cancellation/recovery/dispatch/preservation tests**, **75
connection-management tests**, and production server typechecking pass.
These combined checks do not mean every intermediate PR independently
ran the full repository suite.
- Real master-to-stack database upgrade passes: **379 unchanged prior
migration receipts plus 25 new migrations**, with the gateway
responsibility fixture preserved.
- Owning-branch checks: 84 runner installation/settlement cases plus
runner typechecking and generated TypeScript/Rust profile agreement; 253
GitHub review workflow cases. Stop-attribution and held-worker readiness
regressions failed before their fixes.
- Failure accounting: the initial combined run passed 349 cases and
failed six idle assertions in a reused preservation database containing
old cancelled runs. Repeating the combined command with a fresh
preservation database passed. Earlier invalid project selection, merge
import/type errors, and the interrupted full local suite are not counted
as passing checks.
- **Latest-head CI and review remain required.** Prior CI findings
include GitHub idle observation, route teardown, attention cleanup,
touch-picker E2E, workspace health, and voice-cleanup timing; local
passes do not erase those failures. No full local repository-suite,
deployed sleep, fleet cost, or live Copilot qualification claim is made.


</details>

## Risks

- In-process signals do not capture independent SQL or other replicas.
Supported external events still need ingress.
- Pending assignments and operation receipts retain their original
binding identity. A new agent configuration cannot take their ownership.
- Genuine qualification, OAuth, and recovery deadlines remain
obligations. They must not be discarded merely to make the worker quiet.
- The parent coarse-hint guard prevents recurring Muse discovery; real
company/binding authority changes retain their signals.
- No full local repository suite, full chat suite, live Muse or Copilot
qualification, deployed sleep, database suspension, external alarm
coverage, or cost savings is claimed. Existing Cloud blockers remain.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, code execution, real
PostgreSQL tests, and GitHub tools. The exact runtime model identifier
and context-window size are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Codex <noreply@openai.com>
2026-10-29 06:18:40 -05:00
4d0847c4ca fix(server): settle external conversations from committed work (#17772)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/6/changes/paperclip/6
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip manages AI agents and the tasks that they execute.
> - External conversations must become idle after an authorized response
is published and all related work is complete.
> - Native replay and stranded-task recovery still discover this
settlement work through recurring scans.
> - A new deadline worker must preserve response ordering, monitor
handoffs, and unfinished work.
> - This pull request gives settlement one shared readiness predicate
and activates its worker from committed changes.
> - Existing rows provide recovery truth. No new table or per-feature
timer is added.
> - The benefit is a settlement worker that becomes quiet and resumes
when relevant work changes.

## Linked Issues or Issue Description

Refs #17758. This is slice 56. Slice 55 has merged. Related: #17606
(chat milestones), #17663 (bounded run reads), #17665 (monitor proof),
and #13809 (answered Slack conversation lifecycle). The provider
applicability remains Slack and Speko-owned conversations. This does not
extend Telegram settlement from #16559.

**What happened?**

Conversation settlement depended on periodic native replay and generic
task recovery. An exhausted monitor also cleared its schedule before
recovery admission. During that gap, an answered conversation could look
finished. Failed or deferred admission lost the monitor schedule.

**Expected behavior**

Relevant committed changes activate settlement. The worker uses the
owning service's evidence and becomes quiet when no settlement is owed.
Monitor recovery stays pending until admission, and restart does not
admit an already accepted recovery twice.

**Steps to reproduce**

1. Create an active external conversation with a successful run and an
authorized published response.
2. Keep execution, approval, a goal, or a monitor pending. Let the
settlement worker become quiet.
3. Resolve that prerequisite through its owning service. Verify that the
conversation settles without another periodic sweep.
4. Delay or fail exhausted-monitor recovery admission. Verify that the
monitor remains pending and the conversation cannot settle during the
handoff.

**Paperclip version or commit**

Accepted production source: `50f4432ed88537b8d522cf1dce24c33588db0bac`.
Parent #17758 merged as `8ac5a128e66fb672e88106412f76cf278599bfc4`. The
publication adopts that actual squash through a normal merge with an
unchanged complete child tree.

## What Changed

- Preserve quiet after coarse company-only maintenance hints. The shared
inbound-notice and response-availability helpers keep settlement enabled
by default. Only the milestone dispatcher suppresses their duplicate
settlement fanout. Its scoped issue-review signal and the explicit
company-authority signal still wake real work. Four database cases prove
both quiet and real company-wide producer delivery.
- Preserve source-generation checks for chat handoff,
task-before-comment locking, issue-scoped decision invalidation, and
current conversation event columns from master.
- Track initial external conversation settlement through shutdown
without blocking HTTP readiness on endpoint or task locks.

- Reuse the real queue's coalesced recovery receipt after restart,
without admitting the same monitor recovery again.

- Share the existing conversation readiness predicate between bounded
discovery and locked settlement. Preserve current provider policy,
run/publication proof, company boundaries, and endpoint-to-issue lock
order.
- Register a scoped deadline worker through the delivery coordinator.
Preserve startup, restore/worktree suppression, drain/resume, failure
recovery, and joined shutdown.
- Extend existing review, milestone, wake-notice, and finalization
signals. Add notifications at independent issue, comment, goal, session,
and wake-receipt unblocks.
- Keep monitor owner recovery pending until guarded admission. Reuse an
accepted receipt for the same monitor schedule after restart, even when
its limit reason changes; retain compatibility with legacy receipt keys.
Commit board escalation and its monitor clear together.
- Delegate periodic native settlement while preserving resource
callbacks. Keep direct/manual defaults and preserve generic recovery
ordering with a read-only readiness guard.
- Add the producer and lifecycle audit in
`doc/plans/2026-10-26-external-conversation-settlement-sleep.md` and
update the stack ledger.

## Verification

Accepted production source: `50f4432ed88537b8d522cf1dce24c33588db0bac`.
Publication head: `b256bb52647affd9f5279ea8c40f48bbe40f031f`.
The complete accepted child tree stays unchanged when adopting merged
parent #17758. This publication adds only the audit document.

- **3,129 distinct cases in 37 complete server files pass**, plus **18
selected chat-response cases** (3,147 selected cases). The other 1,796
chat cases were not run locally. Full settlement, queue, scheduling,
run-state, goals, interactions, task Retry, decision targets, status
reassessment, workspace, process recovery, and review consumers are
covered.
- **Preserved failure:** the first 35-file command passed 2,445 cases
and timed out one restored-work handoff at its existing 15-second limit.
That aggregate command failed. The unchanged full 89-case actions file
then passed on a fresh fixture; the affected case took 22 ms. Root cause
was not established. No timeout or assertion changed. The 34 other files
passed originally. Distinct counts exclude duplicate actions passes.
Fresh CI remains a separate gate.
- **Indirect wake regression:** the original unconditional baseline
failed two quiet checks. Guards alone left the chat case failing with
three candidate queries. The final controlled indirect baseline fails
one of four cases; the repair passes all four with the same test hash.
Positive controls preserve real company-only producers.
- **Source and fixture controls:** all 38 selected test files restore to
their exact committed hashes after fixture imports. Fresh PostgreSQL 17
fixtures use 413 migrations. All five manual merge resolutions preserve
current authority, locking, and event-column contracts.
- **Static checks pass:** database build; server typecheck and build;
module boundaries; migration order; Copilot profile identity. Runner
packages equal the accepted parent byte for byte. No new Runner/package
qualification is claimed.
- [Current integration and wake
audit](https://github.com/paperclipai/paperclip/blob/b256bb52647affd9f5279ea8c40f48bbe40f031f/doc/plans/2026-10-26-external-conversation-settlement-sleep.md#current-master-integration-and-indirect-wake-audit-2026-10-29).
Latest-head CI and exact-head Greptile 5/5 must pass before merge.

<details><summary>Earlier revision verification and preserved failure
history</summary>

Receiver failure fairness: a controlled 1,100 ms batch reproduced a
30-second delay for healthy due receivers. The worker now supplies its
existing per-item deadline through `nextRunAtOnError`. All 20 receiver
lifecycle tests pass on the owner and combined tip
`31c12f1d68ff4a51e06fc2be2abf2c2aee9f9d3a`; server production
typechecking passes on the owner. The failed receiver retains its own
backoff, and settled receivers return to zero recurring SQL. The
five-second assertion budget is unchanged. See [the owning
audit](https://github.com/paperclipai/paperclip/blob/83204a67880d980cfbea3771cee19a3cda0022b7/doc/plans/2026-10-25-chat-receiver-discovery-sleep-audit.md#healthy-receiver-progress-after-a-slow-failed-batch).
Current-head CI and review remain required.

Approved delegated Test-tab calls now evaluate caller and target
policies in the existing claim transaction. Real HTTP regressions first
showed a missing caller charge and shared-limit self-rejection. All 78
connection-management cases and 92 gateway cases now pass on the owning
branch, along with server production typechecking. All 78
connection-management cases also pass at combined tip
`d25f830db89c1623bff3547bfc68015c1c66e0cf`. The three new cases cover
shared charges, separate charges, rollback on denial, duplicate
approval, and rejection of a later authorized call. Intermediate
counter/identity fixture failures and a reused-database Slack collision
are recorded in [the owning
audit](https://github.com/paperclipai/paperclip/blob/ef9ae5767430d0093efc736ae0b303ba5afaae65/doc/idle-approved-tool-recovery.md#delegated-test-tab-admission-after-policy-changes).
The earlier combined checks below remain evidence for their stated
revisions. Current-head CI and review remain required.

Inherited voice-cleanup verification: the controlled slow-provider
regression and all 13 lifecycle tests passed on its owner and combined
tip `ab22d8ed0c09028315607414b83b375e5cc0a60a`. That repair changed only
the fixture clock advancement and its audit note.

Current head: `83204a67880d980cfbea3771cee19a3cda0022b7`. This remains a
single-duty PR stacked on #17758.

- Integrated pinned master `8548173fc9efdc0fa07644fb92dcc0b6851a95e5`
with normal merges. Every branch passed generated-schema checks and its
target-branch migration-order gate. Existing SQL is unchanged; the 25
stack migrations follow master’s new migration.
- Duty-specific producer coverage, lifecycle tests, and earlier failure
records:
[2026-10-24-recurring-server-sleep-stack.md](https://github.com/paperclipai/paperclip/blob/d6d8e4ffa6b330ebf4647aec997ee2dde6abc321/doc/plans/2026-10-24-recurring-server-sleep-stack.md),
[2026-10-26-external-conversation-settlement-sleep.md](https://github.com/paperclipai/paperclip/blob/d6d8e4ffa6b330ebf4647aec997ee2dde6abc321/doc/plans/2026-10-26-external-conversation-settlement-sleep.md).
- Combined tip `51e6cbe67979b55b340ea9f0f434c5b5c682ccd6`: **355
startup/cancellation/recovery/dispatch/preservation tests**, **75
connection-management tests**, and production server typechecking pass.
These combined checks do not mean every intermediate PR independently
ran the full repository suite.
- Real master-to-stack database upgrade passes: **379 unchanged prior
migration receipts plus 25 new migrations**, with the gateway
responsibility fixture preserved.
- Owning-branch checks: 84 runner installation/settlement cases plus
runner typechecking and generated TypeScript/Rust profile agreement; 253
GitHub review workflow cases. Stop-attribution and held-worker readiness
regressions failed before their fixes.
- Failure accounting: the initial combined run passed 349 cases and
failed six idle assertions in a reused preservation database containing
old cancelled runs. Repeating the combined command with a fresh
preservation database passed. Earlier invalid project selection, merge
import/type errors, and the interrupted full local suite are not counted
as passing checks.
- **Latest-head CI and review remain required.** Prior CI findings
include GitHub idle observation, route teardown, attention cleanup,
touch-picker E2E, workspace health, and voice-cleanup timing; local
passes do not erase those failures. No full local repository-suite,
deployed sleep, fleet cost, or live Copilot qualification claim is made.


</details>

## Risks

- Signals cover supported in-process writers. They do not supply change
capture for independent SQL or other replicas.
- Real company-wide changes can inspect active candidates. Coarse
maintenance hints do not activate settlement. Configured idle and
retained history must remain quiet.
- Monitor receipt binding and admission order must preserve company,
agent, issue, and exact schedule identity. Current parent handoff locks
and source-generation checks remain intact.
- The local restored-work timeout is retained above. A fresh full-file
pass does not establish its cause; latest-head CI must also pass.
- Generic recovery and Muse/resource duties remain separate slices. This
does not make the whole server idle. Existing Cloud sleep blockers
remain. No deployed sleep, database suspension, external alarm coverage,
fleet cost, or live provider qualification claim is made.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, code execution, PostgreSQL
tests, and GitHub tools. The exact runtime model identifier and
context-window size are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Codex <noreply@openai.com>
2026-10-29 06:02:43 -05:00
8ac5a128e6 fix(server): resolve native finalization notices from committed wakes (#17758)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Native finalization can commit before its recovery notice is
resolved.
> - The periodic orphan pass revisits committed runs to resolve those
notices.
> - Retained completed history should not require repeated discovery.
> - This PR moves that one duty to transaction wakes and concrete
failure retries.
> - Existing notice rows reconstruct work after restart. The action
service still owns resolution.
> - Other completion and resource duties keep their current recovery
paths.

## Linked Issues or Issue Description

Refs #17752 (stack parent: committed run projection), #17748
(accepted-result commit), and #17734 (workspace finalization). These are
distinct recovery obligations. This slice incorporates parent #17752 at
`a49a2dac13b0e1c19da5d3d6b435c781703b1c0b`, now merged as
`50fe32684d2d4e1db129e3c1bb455571344a0c09`. Related #17724 retires
obsolete exact-session notices for terminal runs with no result and
preserves their replay hold. This slice resolves notices after a result
committed; it does not change that no-replay policy.

**Current behavior**
Committed native finalization recovery repeatedly inspects active
watchdog notices. A notice can also be updated in place to describe a
different run, so resolving a previously selected ID alone is unsafe.

**Proposed behavior**
Wake a scoped worker from relevant committed writes. Reconstruct active
finalization notices at startup. Resolve only the current notice after
the native owner rechecks its binding under lifecycle locks. Stop
scheduled work when no matching obligation remains.

**Reason and benefit**
Notice recovery becomes quiet after settlement and reacts to real
changes without a polling delay. Reused notices remain attached to their
current incident. This does not claim that every remaining server duty
or the host can sleep yet.

## What Changed

- Track the initial recovery-notice sweep through shutdown without
blocking HTTP readiness on task locks.
- Require issue/run scope for ordinary finalization fanout. Routine
company-only hints leave dormant notices quiet; dedicated owner and
explicit settings signals retain their scopes.

- Extract the native finalization notice predicate and resolution owner.
Keep the existing recovery-action service responsible for writing the
resolution.
- Bind candidates by company, issue and run. Require a committed result
and an active or escalated finalization notice. Exclude held ownership,
pending status effects and unfinished run projection.
- Recheck coordinator, issue, run and matching actions under locks. A
newer incident cannot be resolved from a stale candidate snapshot.
- Use the shared scoped worker, transaction signals, retry backoff and
lifecycle handling. Add no table, per-feature timer or provider branch.
- Signal action insertion, update, supersession and resolution;
finalization and effect changes; run projection and ownership release;
issue changes; settings activation; and the recovery route that reopens
an action.
- Preserve no-op resolution quiet. Serialize only the three supported
notification IDs, even when a caller supplies a larger internal object.
- Delegate only notice resolution from the periodic path. Keep
manual/default finalization and other completion/resource work.
- Add real PostgreSQL producer, concurrency and lifecycle coverage and a
detailed audit.

## Verification

- Current local source `730e00a7b007a36d188ca0a328ef050d3a25d1ee`
incorporates the parent with a normal merge. All 1,209 parent-only,
eight owned-only and 12 automatic shared paths are preserved. The two
manual paths retain both chat import sets and scope the new notice
fanout. The entire package tree matches parent profile 80 byte-for-byte.
- Controlled real-database regression: original notice-only unscoped
fanout produces three candidate SELECTs for routine company hints. The
same zero-query assertion passes after restoring scoped fanout. The real
notice writer then creates and resolves an action for a committed run
and returns to quiet. Both phases restore production bytes exactly; the
22 cases outside this focused pattern are not counted as passing there.
- The complete main command passes **1,873 cases in 21 files**, without
skips, in 309.69 seconds. It includes all 23 notice-worker cases, full
presentation/ownership read coverage, 88 startup cases, and the
projection/result/physical-work consumers. Process recovery passes 410
in 163.54 seconds and external-chat response passes 273 in 53.48
seconds. Total complete-file acceptance: **2,556 cases in 23 complete
files**, with no skips. The additional focused chat selection passes 18
cases in 13.44 seconds; 1,796 unselected chat cases do not count. Total
selected passes: **2,574**. Normal merge
`a0f2b3f4348b078219a53d8cc135c84202ba505e` adopts actual parent ancestry
with this complete tested child tree unchanged.
- The chat selection covers the real reply/notice row-lock regression,
Slack and Telegram response recovery, current-authority denial cases,
exact canonical response binding and internal GitHub attachment
navigation. Other cases in the giant chat file remain unselected; this
is not full chat-suite acceptance.
- Production server typecheck, build, module boundaries, migration order
and source identity checks pass. Twenty dedicated PostgreSQL 17
databases use the unchanged migration 413 schema. Embedded-only
invocations use the existing fresh-per-call recovery helper. All
temporary imports restore exactly and all 24 selected test hashes match
after completion. No assertion or timeout is relaxed.
- Parent package acceptance remains applicable: 130 passing
installation/compatibility/transport cases, 22 installed ACPX/Grok
contract cases and 26 native-provider Rust cases. One existing opt-in
closed Pi snapshot case is skipped because its distribution root is
unset. This does not qualify a live provider.
- Failure history and scope are retained in
`doc/plans/2026-10-26-native-recovery-notice-sleep-audit.md`.
Current-head acceptance: all 57 checks are clean, including protected CI
and security. Greptile gives 5/5 on
`2a8777bbed8b1e10810e3d6d99aae3f25b4854ef`, with no actionable findings.
Prior scores do not substitute. No Ponytail verdict is present under the
authorized missing-review policy. No full local repository suite,
deployed sleep, expanded Cloud wake coverage or measured savings is
claimed.

## Risks

- Resolution takes coordinator, issue, run and action locks in the
native recovery order. Contention must preserve the current incident;
the real concurrent-upsert and competing-resolver cases exercise this
boundary.
- Process-local signals cover instrumented application writers. They do
not add support for independent SQL writers or replicas without
supported ingress. Startup reconstructs the existing durable rows.
- Completed finalization is not proof that external conversation
settlement, Muse reconciliation or physical cleanup finished. Those
obligations retain their owners and recovery paths.
- Discovery uses narrow keyset pages. No fleet benchmark, host
suspension or cost reduction is claimed. Cloud wake coverage remains
unchanged.
- Parent #17752 has merged. This PR targets master at
`50fe32684d2d4e1db129e3c1bb455571344a0c09`. Fresh current-head CI and
review must pass before the authorized protected merge.

## Model Used

OpenAI Codex, GPT-6 family, with repository tools and code execution.
The exact serving model ID and context-window size are not exposed in
this session. No subagent was used for this slice.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Codex <noreply@openai.com>
2026-10-29 05:35:01 -05:00
50fe32684d fix(server): wake committed native run projection from durable changes (#17752)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - A native run has separate result acceptance, task decision, run
status, and resource settlement steps.
> - A task decision can commit before its run status is saved.
> - Recovery currently revisits committed decisions through the periodic
orphan pass.
> - This PR gives the existing run projection repair its own
transaction-driven worker.
> - Existing records reconstruct unfinished work after restart.
Completed history becomes quiet.
> - Other completion and resource obligations keep their existing
recovery paths.

## Linked Issues or Issue Description

Refs #17748 (stack parent: accepted-result commit), #17734 (workspace
finalization), and #17717 (retained session cleanup). Related #17614
preserves terminal notifications. This slice is prepared on current
parent #17748 at `b2efdb2dbbbef5b2227ffa2bd2a9a6cfe3867fe2`; the parent
has merged as `28e38da7e6bdd6af4092dda56bc2be05bed47af5`.

**Current behavior**
The native recovery pass revisits committed decisions to repair the
heartbeat-run status and metadata. A crash between decision and run
writes creates real work, but periodic scanning also revisits retained
history.

**Proposed behavior**
Wake projection repair after committed producer changes. Reconstruct
mismatches on startup and settings activation. Retry concrete failures
through the shared scheduler. Keep the run projection before resource
settlement.

**Reason and benefit**
The repair worker performs no recurring SQL after its work settles. A
real decision, effect settlement, or ownership release reactivates it.
This is one worker migration; it does not establish host or database
suspension.

## What Changed

- Extract the existing projection predicate and write into their
native-runtime owner. The finalizer keeps initial metadata enrichment
and task decision authority.
- Discover accepted, committed, mismatched run projections with company,
issue and run bindings. Exclude pending status effects and held runner
ownership. Read narrow fields instead of whole result payloads.
- Use existing transaction hints, scoped delivery scheduling, failure
backoff and lifecycle handling. Add no tables or per-feature timers.
- Require issue/run scope for ordinary finalization fanout. Routine
company-only hints leave dormant projection quiet; explicit settings and
dedicated producer signals keep their existing contract.
- Connect finalization, pending effects, lifecycle status writes, issue
changes and worktree execution activation. Preserve outer transaction
commit and rollback behavior.
- Lock the current run before deciding which terminal event and
completion time to save. Concurrent live and recovery projection must
not announce the same transition twice.
- Delegate only already-committed projection from the periodic pass. Its
candidate scan uses the same pending predicate to defer remaining
consequences and cleanup until projection finishes.
- Add real PostgreSQL producer, race and lifecycle tests plus an owner
audit.

## Verification

- Current local source `a83b9449233a275176e637c765059f414305d7c1`
incorporates the parent with a normal merge. All 1,208 parent-only,
seven owned-only and ten automatic shared paths are preserved. The only
manual conflict keeps new projection fanout inside the ordinary
issue/run guard. The complete package tree matches parent profile 80
byte-for-byte.
- Controlled real-database regression: the original projection-only
unscoped fanout produces three candidate SELECTs for routine company
hints. The same zero-query assertion passes with scoped fanout. A real
committed result then repairs the run and emits one terminal event
before returning to quiet. Production bytes restore exactly in both
phases. Twenty cases outside that focused pattern are not counted as
passing there.
- The complete main command passes **1,830 cases in 19 files**, without
skips, in 301.14 seconds. It includes all 21 projection cases, 85
startup cases, required quality review and heartbeat run lifecycle, plus
physical-work and result-commit consumers. Separate process recovery
passes 410 in 163.58 seconds and external-chat response passes 273 in
53.26 seconds. Total: **2,513 distinct passes in 21 complete files**,
with no skips. Normal merge `d4b46fd29cb23126d556cc3aeb883e6b41f1a8a5`
adopts the actual parent squash with this entire tested child tree
unchanged.
- Production server typecheck, build, module boundaries, migration order
and source identity checks pass. Seventeen dedicated PostgreSQL 17
databases use the unchanged migration 413 schema. Embedded-only calls
use the existing fresh-per-call recovery helper. All temporary imports
restore byte-exact and all 21 selected test hashes match after
completion. No assertion or timeout is relaxed.
- Parent package acceptance remains applicable: 130 passing
installation/compatibility/transport cases, 22 installed ACPX/Grok
contract cases and 26 native-provider Rust cases. One pre-existing
opt-in closed Pi snapshot case is skipped because its distribution root
is not configured. No live provider qualification is claimed.
- The owner audit at
`doc/plans/2026-10-26-native-run-projection-sleep-audit.md` retains
prior failures and their disposition. Current-head acceptance: all 57
checks are clean, including protected CI and security. Greptile gives
5/5 on `a49a2dac13b0e1c19da5d3d6b435c781703b1c0b`, with no actionable
findings. Old scores do not substitute. No Ponytail verdict is present
under the authorized missing-review policy.
- These checks do not claim a full local repository suite, deployed
suspension, expanded Cloud wake coverage or measured cost savings.

## Risks

- Process-local signals cover instrumented application writers.
Independent SQL writers and replicas without supported ingress are not
newly covered. Durable startup reconstruction remains enabled.
- Projection must precede remaining committed resource settlement. The
real reconciler test proves the periodic path defers cleanup while
projection is pending and resumes it after repair.
- Status decisions, external conversation settlement, watchdog
resolution, Muse reconciliation and resource release keep their own
authority and recovery. A committed result alone is not proof of
completed cleanup.
- Candidate discovery uses narrow bounded pages. There is no large-fleet
performance or deployed sleep claim. Existing Cloud wake coverage and
sleep blockers remain unchanged.
- Parent #17748 has merged. This PR targets master at
`28e38da7e6bdd6af4092dda56bc2be05bed47af5`. Current-head CI and review
must pass before the authorized protected merge.

## Model Used

OpenAI Codex, GPT-6 family, with repository tools and code execution.
The exact serving model ID and context-window size are not exposed in
this session. No subagent was used for this slice.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Codex <noreply@openai.com>
2026-10-29 05:10:16 -05:00
28e38da7e6 fix(server): wake native result commits from durable work (#17748)
## Thinking Path

> - Paperclip manages AI agents and preserves their results through
failures.
> - Native completion must save workspace output before it commits the
accepted result.
> - The orphan recovery pass repeatedly revisits this work even when the
subsystem is idle.
> - Accepted results, workspace receipts, retry dates and leases already
provide durable truth.
> - This PR wakes a scoped worker from those writes and schedules only
real unfinished work.
> - It preserves existing finalization authority and keeps later
projection and resource recovery separate.

## Linked Issues or Issue Description

Refs #17734 and #17717. This is slice 53 of the existing sleep stack,
targeting master after parent #17734 merged at
`a019d00a393b57f531afe8dd8ab0b8a1820d1c4c`.
A current search found no duplicate accepted-result commit PR.

**What problem does this solve?**
Native accepted-result recovery currently depends on periodic orphan
scanning. Quiet instances keep doing work to discover that no result
needs a commit.

**What improvement do you propose?**
Use the shared delivery coordinator with transaction-bound producer
signals. Reconstruct unfinished results at startup. Preserve saved retry
and lease deadlines. Remove only uncommitted-result execution from the
periodic pass.

**Why is this useful?**
The accepted-result worker becomes quiet with no work or retained
completed history. Real results and completed workspace operations
reactivate it without a polling delay. This does not claim that the
whole server or database can sleep yet.

## What Changed

- Track the initial result-commit sweep through shutdown without
blocking HTTP readiness on recovery locks.
- Keep ordinary company-only finalization hints from reconstructing
dormant result work. Existing company settings and dedicated owner
signals remain supported.

- Add a native result-commit worker. Bind candidates by company, issue,
run, accepted result and a successful workspace receipt. Exclude
committed, terminal, held and pending-effect work.
- Signal both accepted-result writers and workspace receipt writes
before their transaction changes. Extend the existing finalization
fanout for retry, lease, effect and completion transitions.
- Add an optional atomic due-date check to the existing finalizer claim.
A lease collision or later retry does not consume a failed attempt.
- Signal native retry cancellation so it removes the saved wake after
commit.
- Register through the existing heartbeat suppression and shared
delivery lifecycle. Preserve outer commit/rollback, drain/resume,
settings activation and shutdown behavior.
- Delegate only uncommitted-result execution from the periodic orphan
pass. Keep committed projection and resource settlement recovery
enabled.
- Add real producer/lifecycle tests and a detailed audit. No new tables,
provider branches or per-feature timers.

## Verification

- Current local source `2af88fa55f961a74340880240019f6cd31e21bf1`
incorporates the parent with a normal merge. All 1,203 parent-only, nine
owned-only and 12 automatic shared paths are preserved. The only manual
conflict keeps the new result fanout inside the existing ordinary
issue/run scope guard. The complete package tree matches parent profile
80 byte-for-byte.
- Controlled real-database regression: the original result-only unscoped
fanout produces three candidate SELECTs for routine company hints. The
same zero-query assertion passes after restoring the scoped fanout. A
real workspace receipt and accepted result then commit exactly one
decision and return to quiet. Red and green restore production bytes
exactly. Twenty cases outside the focused pattern are not counted as
passing there.
- The complete main selection passes **1,746 cases in 16 files**,
without skips, in 277.97 seconds. This includes all 21 result-worker
lifecycle cases and 82 startup cases, including held result recovery,
HTTP readiness and shutdown joining. Separate process recovery passes
410 cases in 162.42 seconds and external-chat response passes 273 in
53.41 seconds. Total: **2,429 distinct passes in 18 complete files**,
with no skips. Normal merge `998239b019defe52e7b5d64f884de4e871ccd736`
adopts the actual parent squash and preserves this complete tested child
tree.
- Production server typecheck, build, module boundaries, migration order
and source identity checks pass. Fifteen dedicated PostgreSQL 17
databases use the unchanged migration 413 schema. Embedded-only calls
use the existing fresh-per-call recovery helper. All temporary imports
restore byte-exact, and every selected test hash matches after
completion. No assertion or timeout is relaxed.
- Runner validation belongs to the unchanged parent package tree: 130
passing installation/compatibility/transport cases, 22 installed
ACPX/Grok contract cases and 26 native-provider Rust cases. One existing
opt-in closed Pi snapshot case is skipped because its distribution root
is not configured. This does not claim live provider qualification.
- Earlier Greptile 4/5 on `656f6722be1aedf3d52b7f853956e15838204278`
correctly identified startup blocking on result recovery. The prior
branch `108cf0dc8296bf451b721ddac55ecbcd035d00f0` already tracks its
ready promise through the existing lifecycle owner. Current full startup
acceptance verifies the fix in the merged context. The later Greptile
service error is not a pass; current-head acceptance now passes: all 57
checks are clean, including protected CI and security. Greptile gives
5/5 on `b2efdb2dbbbef5b2227ffa2bd2a9a6cfe3867fe2`, with no actionable
findings. No Ponytail verdict is present under the authorized
missing-review policy.
- The owner audit at
`doc/plans/2026-10-26-native-result-commit-sleep-audit.md` retains
earlier failures and their disposition. These checks do not claim a full
local repository suite, deployed app/database suspension, expanded Cloud
wake coverage or measured cost savings.

## Risks

- Process-local signals cover instrumented application writes in the
owning server process. They do not cover independent SQL writers or
another replica without supported ingress. Durable startup
reconstruction remains enabled.
- The initial native decision and its run projection are separate
transactions. The periodic reconciler still repairs already-committed
results and releases resources. This PR must not be used to infer that
committed means fully settled.
- Candidate discovery adds bounded, narrow reads at startup and after
signals. No large-fleet query benchmark is claimed.
- Existing Cloud alarm coverage, host sleep safety and resource blockers
are unchanged. No deployed sleep or savings claim is made.
- Parent #17734 has merged. This PR targets master at
`a019d00a393b57f531afe8dd8ab0b8a1820d1c4c`. Fresh current-head CI and
review remain required before merge.

## Model Used

OpenAI Codex, GPT-6 family, with repository tools and code execution.
The exact serving model ID and context-window size are not exposed in
this session. No subagent was used for this slice.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Codex <noreply@openai.com>
2026-10-29 04:53:11 -05:00
a019d00a39 fix(server): wake native workspace finalization from committed work (#17734)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Native runs can accept a result before workspace copy-back finishes.
> - The periodic orphan pass repeatedly tries this recovery, including
cases that require operator action.
> - Copy-back needs exact ownership evidence. A generic timer cannot
grant that authority.
> - This pull request wakes workspace recovery from committed changes
and local owner completion.
> - Saved retries use the existing scheduler. Empty work, completed
barriers, and operator holds become quiet.

## Linked Issues or Issue Description

Refs #17717. This is slice 52 of the recurring-server sleep stack,
targeting master after parent #17717 merged at
`4c56702e06c698cc10d4a86514669aba0f4d9a9b`. Related work: #17709 (status
reassessment), #17687 (unsafe export recovery), and #16478 (workspace
repair holds).

This PR covers native workspace copy-back and validation. Result
commit/projection and resource settlement remain separate recovery
duties. It does not claim full-instance sleep.

## What Changed

- Register a company/run/task-scoped workspace worker. Reconstruct
accepted, unfinished work from existing records. Use saved retry and
lease deadlines.
- Notify from both accepted-result writers (control-plane and PRP
coordinator), workspace receipts, coordinator changes, operator
confirmation, retained workspace repair, and relevant task updates.
Notifications follow the outer transaction.
- Distinguish active local ownership, busy external ownership, pending
Cloud evidence, operator-required evidence, and changed bindings. Only
concrete external ownership/evidence waits receive a scoped retry.
- Preserve advisory locks, signed stop proof, exact binding checks,
physical callback joins, and existing failure policy. Join physical
operations during shutdown.
- Respect the existing heartbeat execution-suppression policy before
discovery and execution; wake suppressed work on settings activation.
- Skip physical workspace recovery in the enabled periodic orphan pass.
Keep direct/startup reconciliation and the remaining result/cleanup
recovery paths.
- Keep routine company-only finalization hints quiet. Ordinary work
requires issue/run scope; explicit settings and owner-release events
keep their company-wide contract.
- Preserve the parent's entire Runner/package tree, profile 80 and all
historical identities. Add the dated obligation, producer, lifecycle and
limitation audit.

## Verification

- Current local source: `4059b24e3ea5c623be54ade18ec9b6ab78eb0289`,
prepared by a normal merge of the current parent. The sole manual
conflict keeps ordinary workspace fanout inside the existing issue/run
guard. All 1,198 parent-only, 15 owned-only and 10 automatic shared
paths are preserved. The complete package tree matches the parent
byte-for-byte.
- Controlled regression: the original workspace-only unscoped fanout
performs three candidate SELECTs for routine company hints. The same
zero-query assertion passes with scoped fanout. A real accepted result
then produces one successful workspace settlement and returns to quiet.
The failed baseline remains in the audit.
- The first complete local group passes **1,693 cases in 14 files**,
including all 19 workspace-worker cases. It covers both accepted-result
producers, physical ownership, export retry/failure, finalization
recovery, arbiter corpus, issue recovery actions, control-plane port,
workspace recovery, heartbeat recovery, startup, retained cleanup and
native execution.
- Separate process-recovery and external-chat response files qualify the
changed recovery/settlement paths without sharing their general test
database with other files. Both pass in full: 410 process-recovery cases
in 162.79 seconds and 273 external-chat cases in 53.79 seconds. The
total is **2,376 distinct passes in 16 complete files**, with no skips.
Normal merge `5c46c52873158529736b8349e4d44658865108ee` adopts the
parent squash with this entire tested child tree unchanged.
- Production server typechecking, build, module boundaries, migration
order and source-profile checks pass. Thirteen dedicated PostgreSQL 17
fixtures use the unchanged migration 413 schema. Embedded-only paths use
the existing recovery helper with fresh per-call fixtures. All temporary
imports are restored byte-exact. No test assertion or timeout is
relaxed.
- Runner validation belongs to the unchanged parent package tree: 130
passing installation/compatibility/transport cases, 22 installed
ACPX/Grok contract cases and 26 native-provider Rust cases. One existing
opt-in closed Pi snapshot case is skipped because its distribution root
is not configured. These are source-scoped checks, with no live provider
qualification claim.
- The owner audit at
`doc/plans/2026-10-26-native-workspace-finalization-sleep-audit.md`
preserves earlier failures and their disposition. Current-head
acceptance: all 57 checks are clean, including protected CI and
security. Greptile gives 5/5 on
`7df5c9c44ea9e171be3c61b4430d3727b10f3337` with no actionable findings.
Earlier scores do not substitute for this result. No Ponytail verdict is
present under the authorized missing-review policy.
- No claim of a full local repository suite, deployed app/database
sleep, expanded Cloud wake coverage or measured cost savings is made.

## Risks

- Supported wake producers are in-process application services. This
adds no cross-replica or independent SQL-writer transport.
- A real unresolved export still needs recovery. Busy owners and pending
Cloud stop evidence retain a 30-second scoped check. No timeout
authorizes copy-back.
- Result projection and resource release still use their existing
recovery. Some existing cleanup failures remain best effort; this PR
does not infer cleanup success from a workspace barrier.
- Cloud alarm coverage and host-sleep safety remain unchanged. No
deployed suspension or cost savings have been measured.
- Parent #17717 is merged. Current base is master at
`4c56702e06c698cc10d4a86514669aba0f4d9a9b`. Fresh current-head CI and
review must pass before this slice merges.

## Model Used

OpenAI Codex, GPT-6 family, with repository tools and code execution.
The exact serving model ID and context-window size are not exposed in
this session. No subagent was used for this slice.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Codex <noreply@openai.com>
2026-10-29 04:40:01 -05:00
4c56702e06 fix(server): schedule retained native-session cleanup (#17717)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Native runs can retain a local session after an interrupted durable
suspend.
> - The orphan reaper repeatedly scans completed history for that
cleanup duty.
> - Idle scans keep the database active. Removing them requires complete
wake and ownership paths.
> - This pull request moves retained-session cleanup to committed
signals, local release events and saved deadlines.
> - Existing physical proof checks still decide whether cleanup is safe.
The shared scheduler does not grant execution authority.
> - The benefit is quiet retained history with recoverable cleanup and
owned shutdown.

## Linked Issues or Issue Description

Refs #17709 and #18135. This is slice 51 of the existing
recurring-server sleep stack. Both referenced dependencies have merged.
The target is `master`.

**What happened?**

The periodic orphan pass scans retained native sessions even after their
cleanup is complete or no automatic action is safe. Some eligible
sessions also depend on a local session, environment lease or original
maintenance callback releasing ownership. An earlier decision
notification can be consumed before the run's later terminal projection
commits.

**Expected behavior**

Reconstruct existing work at startup. Wake from committed writes and
actual owner release. Register the saved claim expiry or a probe for a
specific live process. Stop recurring discovery when no obligation
remains. Preserve original callback ownership and all existing cleanup
proof checks.

**Steps to reproduce**

1. Retain completed native runs with a durable-suspend close failure.
2. Let the periodic orphan pass run with no new work.
3. Observe repeated cleanup discovery. Separately, delay terminal
projection after its decision notification is consumed and observe the
missing cleanup wake.

**Paperclip version or commit**

Parent #17709 at reviewed head
`3b75f4bc1da1370304f069fc287af3d693575716`, landed as
`df6156c2e37f542a69f393dde31e357b82b7cac1`. Current integrated master:
`31b927e3013a8a4b3266854b740cf40a24753788`.

## What Changed

- Move scoped, paged discovery to the retained cleanup owner. Preserve
explicit manual recovery.
- Register the duty with the shared scheduler and remove it from the
periodic orphan pass. Keep concrete lease expiry and live-process probe
obligations.
- Use typed outcomes for settled/refused work and process, session,
environment, maintenance or lease waits. Keep physical proof and
quarantine decisions in the executor.
- Wake from committed finalization and terminal projection writes,
durable process/lease release, and local session or callback settlement.
Routine company-only finalization hints leave dormant cleanup quiet.
- Join duplicate cleanup and serialize inspections on one database lane.
Keep original Runner callbacks owned until settlement and shutdown.
- Preserve all master profile fixtures and the branch's historical
identities. Save the colliding sleep profile 79 separately. Generate
combined Copilot profile 80 from its source and retain master's other
provider profiles.
- Add the owner audit and regression coverage. No new table, migration
or independent maintenance timer is added.

## Verification

- Server acceptance: **2,342 distinct passing cases in 18 complete
files**. The 14-file unaffected group contributes 1,532 passes. Full
startup contributes 76, process recovery 410, environment service 51,
and external-chat response 273. The 29-case cleanup worker suite and
977-case executor suite run in full. No case in these files is skipped.
- Controlled scope regression: removing only the ordinary finalization
issue/run guard wakes dormant retained cleanup; the same assertion
passes after restoring it. A real local owner release still resumes the
durable candidate.
- Preserve the first broad failure: 1,607 passed and one startup
shutdown case failed because the coordinator mock lacked `stop()`. Add
only that mock method. All 76 unchanged startup cases then pass. Do not
treat the first broad command as green.
- Dedicated PostgreSQL 17 databases use the existing migration 413
schema. Embedded-only fixtures use the existing recovery helper with
fresh per-call databases. All temporary imports are restored byte-exact.
No assertion or timeout is relaxed.
- Current-master integration preserves both complete source histories.
The server, UI and database trees are identical to the server-tested
source. All master historical profile fixtures remain byte-exact. The
prepared sleep profile 79 remains independently inspectable.
- Current runtime validation at
`d08f764e3efe75e96929173afe7ee8739121ad9f` passes all 12 commands (22
installed ACPX/Grok contract cases and 26 native-provider Rust cases):
`pnpm install --frozen-lockfile --ignore-scripts`; Copilot/Grok identity
and generated profile checks; Runner and server typechecking; server
build; Copilot/Pi installation, profile compatibility and transport
settlement files (130 passed; one opt-in closed Pi snapshot case skipped
because its distribution root is not configured); installed ACPX
model/reconnect package contract and Grok identity tests; Rust
native-provider backend tests; module boundaries and migration order.
- Earlier 94-case installation/settlement acceptance applies to the
prepared profile 79 source. It is retained as history and does not
substitute for the current profile 80 validation above.
- Failure history and duty-specific evidence remain in
`doc/plans/2026-10-26-retained-native-session-cleanup-sleep-audit.md`.
Exact-current-head acceptance: all 60 checks are clean, including
protected CI and security; Greptile gives 5/5 for
`281d579de0d08e907194b8b790a0597b07d16b7b` with no actionable findings.
No Ponytail review is present under the authorized missing-review
policy.
- These checks do not claim a full local repository suite, live Copilot
or Daytona qualification, deployed host/database suspension, or measured
cost savings.

## Risks

- Missing a supported producer could strand cleanup. Tests exercise real
finalizer, heartbeat, environment and process writers. Process-local
signals cover in-process writers; no multi-replica or external SQL
notification transport is added.
- A timeout can leave an original callback active. Cleanup and shutdown
must keep waiting for it. The existing global maintenance drain is
conservative across roots.
- A retained live process still has a scoped 30-second absence probe. A
saved lease keeps its actual deadline. Operational errors retain retry
work. Immutable proof refusals and operator-required histories do not
gain automatic retry authority.
- Cleanup keeps all existing artifact, identity, claim, no-launch and
quarantine checks. Terminal status alone does not authorize physical
cleanup.
- This PR does not expand Cloud alarm coverage or relax host sleep
eligibility. It proves worker behavior, not deployed app/database
suspension.
- The Copilot source identity has changed; these checks do not claim new
live provider qualification.
- The parent has merged. This PR is merged only after its current-head
protected CI and review gates pass under the existing campaign
authorization.

## Model Used

OpenAI Codex, GPT-6 family, with code execution and repository tools.
The exact serving variant and context-window size are not exposed in
this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Codex <noreply@openai.com>
2026-10-29 04:24:57 -05:00
df6156c2e3 fix(server): wake native status reassessment from committed changes (#17709)
## Thinking Path

> - Paperclip manages agents, tasks and their durable native results.
> - Changed evidence, task authority or review retirement can require a
new status assessment.
> - Periodic orphan recovery repeatedly reads history to find these
changes.
> - This change gives reassessment an owner driven by committed changes
and saved deadlines.
> - Existing result, assessment, decision and task rows remain durable
truth.
> - The status committer still verifies current sources and authority
before writing.
> - Settled or insufficient evidence becomes quiet until a supported
producer changes it.

## Linked Issues or Issue Description

Refs #17702 (merged), #17679 and #17680. This is slice 50, now based on
master. It owns native status reassessment; workspace settlement,
retained sessions and other orphan duties remain separate.

**What happened?**

Periodic recovery repeatedly inspects completed native results. Removing
that scan without complete writer coverage or current authority checks
could strand new evidence or commit an old result over newer work.

**Expected behavior**

Reassess from existing durable facts after relevant outer transactions
commit. Retain real retry/lease deadlines and restart/drain recovery.
Preserve current authority, quality-review and supersession checks. Make
no recurring SQL when work is settled or dormant.

**Steps to reproduce**

Complete a native result awaiting evidence or review, leave it idle,
then approve a real work product or retire the selected automatic
review. Its saved result should advance once when authorized, or record
the existing nonterminal business gate, without a periodic scan.

## What Changed

- Extract reassessment and its pure status policy from finalization
recovery into their owning modules. Add a scoped worker using the
existing delivery coordinator and scheduler; no queue table or migration
is added.
- Retain the three durable discovery triggers: changed work-product
history, authoritative task status/version, or retirement of the
selected automatic completion review. Preserve selected-source,
ownership, effects, retry and lease fences under the existing committer.
- Notify from actual task/work-product, claim release, approval,
interaction, OAuth, event evidence and workspace-settlement owners
before their transaction writes. Keep provider calls outside short
transactions and nested writes behind outer commit.
- Scope ordinary milestone/finalization/coalesced-input wakes to an
issue/run. Keep genuine company authority restoration explicit. Real
Photon and coalescer regressions cover all three response/status queues.
- Move the current parent's required quality policy into the owner and
apply it to every reassessment that could complete a task. An unmet
review records the existing in-progress decision and next action,
avoiding an operational retry loop. Preserve conversation/session reset
locks and the workspace omission-barrier signal.
- Skip reassessment in periodic recovery while preserving
explicit/startup recovery and the historical supersession guard before
independent workspace work. Document the source contract, producer
inventory, failures and qualifications in the linked audit.

## Verification

- Broad source `9fddb3f0b1157df32b64fb1f22e9d6e9624470e8` passes **2731
distinct cases in 28 complete files**, with no skips: 2458
producer/owner/authority/workspace/quality cases in 394.43 seconds and
all 273 governed-response cases in 53.74 seconds. Nineteen dedicated
fresh PostgreSQL 17 databases migrate through 0413; eighteen
embedded-only invocations preserve fresh-per-call isolation through the
existing recovery helper. All 22 temporary imports restore exactly and
all 28 hashes match.
- Final runtime source `5ea3b0fd016bf7e63ba82a7044825a46a0cd2082` passes
**1211 cases in five complete affected files** in 108.23 seconds after
the narrowly reproduced evidence-trigger fix: all 43 worker, 145 corpus,
32 finalization-recovery, 968 native-session and 23 quality-review
cases. Four fresh databases plus the quality helper's own fresh fixture
use PostgreSQL 17. Its one adapted import restores exactly; all five
hashes match. The other 27 broad-run test files are unchanged. These
qualifications are source-scoped and not cumulatively double-counted.
- Required/optional real regressions reproduce retry loops on
retired-review and evidence-approval paths before repair; both become
SQL quiet afterward with unchanged assertions/time limits. Controlled
removal of only ordinary scope guards reproduces two coarse-hint SQL
failures; exact guard restoration passes. Real producer, outer
transaction, claim, authority, 103-item backlog, retry and drain cases
pass. Photon transport is mocked; callbacks, locks and observed SQL are
real.
- Normal merges preserve 12661 parent/unrelated entries, 35 owned
entries and 21 automatic shared results, with five original conflicts
reviewed explicitly. The parent's actual squash reconciliation preserves
the entire held child tree. The final quality fix changes only its owner
and tests. Fourteen added comments are removed with identical nontrivia
tokens; no directives are removed and the final comment check is empty.
- Database build, server types/build, boundaries and exact-head
migration order pass. The database tree is identical to merged #17702:
no new SQL, queue table or snapshot is generated. Earlier benchmarks,
host limitations, failed assertions and their repairs remain in
`doc/plans/2026-10-26-native-status-reassessment-sleep-audit.md` and
`doc/idle-native-status-reassessment.md`.
- This qualifies targeted external PostgreSQL behavior, not embedded
bootstrap on the semaphore-exhausted host, a full local repository
suite, deployed sleep or measured fleet savings. Fresh exact-head CI and
review remain required.

## Risks

- Notifications retain the process-local supported-writer contract.
Independent SQL writers and uncoordinated replicas are not covered by a
new transport.
- Reassessment competes with current authority changes. Existing
row/source locks and retries remain required; arbitrary missing
identities have no row to lock, so this is not a general predicate-lock
guarantee.
- Discovery pages 100 rows but retains outstanding candidates in memory.
It remains proportional to backlog size, and cancellation occurs between
queries.
- Other orphan/workspace/session duties and Cloud sleep eligibility
remain unchanged. Missing supported producer coverage could strand
dormant work, so the producer audit and real callback/transaction tests
remain part of acceptance.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, repository tools, shell
execution and PostgreSQL tests. The runtime does not expose a more
specific serving snapshot or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass (targeted scope is stated
above)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Codex <noreply@openai.com>
2026-10-29 03:40:01 -05:00
79ce86630a fix(server): schedule governed review response recovery (#17702)
## Thinking Path

> - Paperclip manages agents, tasks and their external chat responses.
> - A completed chat turn can owe a response while an earlier review
gate remains pending.
> - Periodic recovery revisits that response history even when no work
can advance.
> - This change uses the existing delivery coordinator and saved retry
deadlines.
> - Approval, interaction and authority changes wake the affected issue
or run after commit.
> - The existing presentation owner verifies the durable result and
current authority.
> - Settled and dormant history becomes quiet without losing future
eligible responses.

## Linked Issues or Issue Description

Refs #17696 (merged) and #15625. This is slice 49, now based on master.
It owns governed-review response presentation. Accepted responses and
pending decision effects keep their existing owners.

**What happened?**

Native finalization recovery repeatedly inspects committed review
responses. Removing the scan without covering approval, interaction,
task-policy and authority changes would strand responses that become
eligible later.

**Expected behavior**

Recover an owed response once from existing durable facts. Enforce
authority at publication, wake after relevant outer transactions commit,
retain real retry deadlines and restart/drain recovery, and stop
recurring SQL when no response can advance.

**Steps to reproduce**

Complete an external chat turn while an earlier completion review
remains pending. Block its response behind an approval or interaction,
then resolve that blocker. The response must appear once without a
periodic scan or resolving the original review gate.

## What Changed

- Add a scoped governed-review worker using the existing coordinator,
finalizations, decisions and comment receipts. No queue table or
transaction wrapper is added.
- Keep recovery and publication policy in the native finalizer. Preserve
binding, source/session authority, ownership, deadline and
deleted-comment fences; match coordinator-before-issue lock ordering.
- Notify through actual approval, interaction, OAuth, task-policy and
lifecycle producers before their owned writes. Serialize approval
resolution with task linking so a concurrent link retains its wake.
Nested transactions still settle at outer commit.
- Scope ordinary milestones, finalization and coalesced input to their
issue/run. Use the explicit company authority boundary for genuine
global restoration, including membership changes. Both response workers
share this boundary.
- Register under maintenance and drain gates, disable the two periodic
repair entrances, and retain fresh finalization and explicit recovery.
Add the concurrent 0413 comment-receipt index and migration
registration; retain five snapshots.
- Preserve the producer inventory, source qualifications and earlier
failures in the owner audit. Retain a real Photon regression proving
routine ownership assertions stay quiet and concurrent authority
restoration wakes each worker once.

## Verification

- Scoped repair source `2341714720b5c273f0ce011b48345af0ef39227f` passes
**2053 distinct cases**: 1703 in 15 complete producer/authority/recovery
files, including all 273 governed-response cases and 95 wake-queue
adapter cases, plus 350 selected chat cases. Another 1463 chat cases are
outside that selection. Thirteen fresh PostgreSQL 17 fixtures migrate
through unchanged 0413; the one temporary queue-fixture import restores
exactly. All sixteen captured hashes match.
- Two actual repeated coarse-hint SQL regressions fail before repair and
pass afterward. Actual membership restoration passes before and after.
The same assertions and time limits prove dormant work stays quiet and
real authority restoration still publishes once. Real coalesced input
covers both queues after commit.
- Combined source `586f5674cd9798b33cd22437255e0480b5726d20`, including
independent master #18129, passes **1297 distinct cases**: 1093 in five
complete server files, 185 in five runner files, 14 Node protocol cases
and five UI registry cases. This includes the complete 22-case Photon
file for both response workers. The external Photon transport is mocked;
Paperclip callbacks, transaction fences and observed SQL are real. The
earlier and combined case counts are separate, with no cumulative
double-counting.
- A normal merge retains both complete owned and independent master
binary patches. All twelve new-context hashes and sixteen earlier repair
hashes match. Three dedicated fresh 0413 fixtures plus the live-event
helper's own fresh database use PostgreSQL 17 without source
adaptations. Database build, server types/build, boundaries, full-SHA
migration order and generated TS/Rust profiles pass. The new inherited
Runner vendor inputs rebuild successfully.
- Database bytes remain identical to the previously qualified 0413
source. The recorded populated 0412-to0413 upgrade retains all 411 prior
receipts and 38 companies, appends one receipt and none on replay; the
index is valid and ready. The earlier 2828-case acceptance, CLI journey,
setup failures and their repairs retain their recorded source scope in
`doc/plans/2026-10-26-governed-review-response-sleep-audit.md`.
- Parent #17696 merged with 58 clean checks, Greptile 5/5 and Ponytail
5/5. Its Photon warning was disproved by real callback/SQL evidence and
the security check became successful. This PR still requires its own
fresh exact-head CI and review gates. No deployed sleep, external alarm
or fleet savings claim is made.

## Risks

- Notifications use the existing process-local writer contract.
Independent SQL writers and uncoordinated replicas are outside its
coverage.
- Genuine startup and company authority reconstruction remain
proportional to the owed backlog. Queries page 100 rows, but discovery
accumulates the candidates; this is not a constant-cost global
operation.
- Current publication authorization, durable binding, ownership and lock
ordering remain mandatory. The worker does not resolve the original
review gate.
- The concurrent index uses existing migration replay handling. Other
recovery duties and Cloud sleep eligibility remain separate.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, repository tools, shell
execution and PostgreSQL tests. The runtime does not expose a more
specific serving snapshot or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Codex <noreply@openai.com>
2026-10-29 02:54:46 -05:00
Nicky LeachandPaperclip 80a2b9284b Define durable runtime activity events (#18129)
## Thinking Path

> - Paperclip manages agents and tasks.
> - Runner reports durable run events through PRP.
> - Runtime clients need a typed record of reported activity.
> - The event must keep the normal run authority and read boundaries.
> - This pull request adds the generic runtime activity event contract.
> - Later PRs can publish and consume this contract without private
plugin coupling.

## Linked Issues or Issue Description

First feature prerequisite extracted from #18050. Runner publishing is
#18050; the dependent consumer is #18131. Related independent test
stability work: #18128. The parent search and review history is
preserved in [the verification
archive](https://github.com/paperclipai/paperclip/pull/18050#issuecomment-6489369676).

**Subsystem affected**

Runner event protocol, server run-event persistence and redaction, and
UI event taxonomy.

**Problem or motivation**

Core needs a durable, typed activity record tied to the authenticated
run. A text marker is not an event contract.

**Proposed solution**

Add `runtime.activity.recorded` as a P1 event with a closed `{
namespace, activityKey }` payload. Runner knows no plugin or panel
identity. Run/session identity, sequence and emission time stay in the
outer envelope; Core resolves company, task and agent through the
authorized run binding. Use the existing authenticated persistence,
acknowledgement, replay and redaction paths.

## What Changed

- Define and validate the event in PRP v1, v2 and v3. Update the
generated protocol artifacts and event catalog.
- Preserve saved and live event redaction. Test persistence, replay
deduplication and the existing run-read boundary.
- Register the event in the UI taxonomy without changing panel display
behavior.
- Advance the source-bound Copilot identity to 78. Retain all published
historical identity fixtures without changing their bytes.

## Verification

- Root `pnpm typecheck` and `pnpm build`: passed for the revised
activity contract.
- Node protocol checks: 14 passed. Provider identity and registry tests:
185 passed. Server tests: 103 passed. UI event registry: five passed.
- Maintained Grok and Copilot identity generator checks and `git diff
--check`: passed.
- The first activity-contract review scored 4/5 because the dependent
producer and readers still used the earlier contract. Both dependent PRs
are now updated and restacked; the finding is resolved and review is
running again.
- Initial extraction retained a consumer-only import in one server
suite. That suite failed to load. The consumer case and import were
moved out; the final three server files passed all 103 cases.
- Earlier panel-specific head `6137c50bc` had green CI and standard/Apex
5/5. Those scores do not qualify this revised activity contract. Fresh
CI and reviews are pending. Earlier combined results in the archive
apply only to their recorded source revisions.

## Risks

This change is additive. It adds no route, publisher, filesystem
transport, provider sandbox grant, or panel display behavior. Activation
hints grant no permission to read a plugin view. Provider identities
bind the changed protocol source; historical identities remain
decode-only. No schema migration or dependency change is required.

## Model Used

OpenAI Codex, based on GPT-6, with reasoning, repository tools and code
execution. The exact serving snapshot is not exposed.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 00:32:12 -07:00
ec3b558277 fix(server): schedule accepted native response recovery (#17696)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Native runs store accepted results and their finalization decisions.
> - A completed run can still owe its public answer after an
interruption.
> - Periodic recovery scans for that answer even when no new work
exists.
> - This pull request wakes recovery from committed changes and saved
retry deadlines.
> - The existing owner still verifies the result, source, and current
publication authority.
> - Settled or dormant response work no longer needs its own periodic
scan.

## Linked Issues or Issue Description

Refs #17690 (merged). This is slice 48 of the sleep migration stack, now
based on master. Related: #17661 handles GitHub terminal publication;
this change handles native accepted-response presentation.
Governed-review presentation remains a separate duty.

**What happened?**

Native finalization recovery repeatedly checks already accepted results
for a missing answer. Removing that check without complete notifications
would lose responses when evidence arrives late, an agent resumes, or
admission settles after execution.

**Expected behavior**

Recover the answer from its saved result when a supported change makes
it eligible. Retain real retry deadlines. Stop querying when the answer
is selected or cannot currently be published. Reconstruct work after
restart.

**Steps to reproduce**

1. Commit a native accepted result with no selected response comment.
2. Run finalization recovery while its source is unavailable or locked.
3. Restore that source or release the lock. The answer must appear once
without repeating provider execution.

## What Changed

- Honor recorded non-create decisions and skip-comment policy in both
discovery and recovery. Apply durable conversation/result/continuation
guards before recovery locks. Preserve genuine unanswered and legacy
recovery.
- Scope routine response wakes to the affected issue/run. Coalesced
input names its active run; pending-effect settlement names its issue.
Sixteen existing global authority/configuration hooks use one explicit
company invalidation boundary. No new transaction wrappers or tables are
added.
- Add an accepted-response worker using the existing delivery
coordinator and scoped deadline helper. Preserve saved retry deadlines
and pending-effect fences under the owner's lock.
- Share the finalization notification boundary. Wake on finalization
settlement, exact accepted-result/final-message evidence, agent
availability, retry admission, and existing chat authority changes.
- Keep lifecycle policy in services. A narrow pre-write status hook lets
lifecycle retain ownership of its transaction and status transitions.
- Register the worker during enabled maintenance startup. Remove its
authority subscription on shutdown. Periodic replay skips this duty on
both committed and fresh-commit paths; ordinary finalization and
explicit recovery retain their behavior.
- Add a partial index and expression statistics for unpresented native
runs. Migration 0412 supports concurrent replay and adds no queue table.
- Add real PostgreSQL and lifecycle coverage. Preserve the
implementation and producer audit in the plan document.

## Verification

- Additional real Photon callback acceptance on the published production
code disproves the security warning: ten active assertions cause zero
response-recovery hints/SELECTs, while three concurrent assertions
during an actual attention-to-active recovery cause exactly one
wake/SELECT. The existing locked status guard already enforces this
boundary. No production change was needed; the resolved finding now has
a successful current-head security check. The regression will be
retained with the next slice.
- Eligibility repair source `892f36e5f66ba1af123034936a7160c64c3ab883`
passes **1489 distinct server cases**: 1139 in six complete
recovery/finalizer/monitor/summary/workspace suites (81.02 seconds),
plus 350 selected chat cases (297.68s). Another 1463 chat cases are
outside the pattern; the complete 1813-case file is not claimed. All
eleven new regressions are included in that count. Five dedicated fresh
PostgreSQL 17 databases migrate through unchanged 0412, with no
fixture-source adaptations. Database build, server types/build,
boundaries and full-SHA migration ordering pass. All seven test source
hashes match.
- The exact published baseline first fails eight behavioral assertions
while the three genuine-answer cases pass. The same corrected test
source passes all eleven after repair: recorded none/reuse remain
suppressed; five ineligible history families take zero recovery row
locks across repeated issue hints; missing/legacy/create-null answers
still publish once; fresh periodic finalization defers presentation to
its worker. Earlier fixture setup and variable/compiler failures remain
explained in the audit, rather than erased by later success.
- Repair source `2fc8b0614aaf9ac7337045de4ced7325f95edc45` passes **1821
server cases**: 1496 in 13 complete producer/lifecycle/authority suites
(110.63 seconds), plus 325 selected chat cases (278.99 seconds).
Coverage includes all native-session cases, queue admission, status
decisions, membership/board access, the complete GitHub workflow,
accepted-response lifecycle and real authority restoration. The other
1477 chat cases are outside this selection; the complete 1802-case file
is not claimed for this repair run.
- Actual PostgreSQL regressions first reproduce a coalesced-input hint
missing its run scope and two routine hint paths producing 12
response-history SELECTs each after three notifications. The same
assertions pass with run-scoped coalescing and zero response-history
SELECTs for unscoped routine hints. Actual membership restoration still
publishes the waiting response once. Assertion time limits are
unchanged; this measures real driver SQL and persisted producer work.
- Eleven dedicated fresh PostgreSQL 17 databases migrate through 0412.
One embedded-only wake-queue fixture import temporarily uses its own
external database and restores byte for byte. All 14 selected source
files match pre-run hashes. This qualifies external-database behavior
rather than reproducing embedded CI locally.
- Master advanced independently with #18126's Pi archive retry fix.
Normal merge `2a535bc61259ef99387369e8b32498f774e5ba2c` preserves both
complete binary patches. All accepted server/database/UI/test/CLI trees
stay identical; the three independent runner installer/manifest files
are retained. All 13 installer tests pass, including stalled header/body
cancellation. Combined server types/build, boundaries and full-SHA
migration order pass. A subsequent normal merge of #18128 at
`e8b78cce5bb557b086bee9ca930eeaab1d09b244` retains its three test-only
file changes with both complete patches preserved. The changed HTTPS
backfill case passes on a fresh PostgreSQL fixture (1 selected case; 178
outside the pattern), and combined types/build, boundaries and migration
order pass again. All 14 repair source hashes remain unchanged. The
independent browser fixture changes are preserved; no local browser run
is claimed.
- The earlier source `9feec170ef8174011fc3c5d3d6d76f0a0f39fea0` passed
the 4171-case full baseline before this scope repair. That scope is
preserved in the audit rather than represented as a current full rerun.
All 0412 database bytes remain unchanged: original concurrent
index/statistics/ANALYZE, prior executable history, journal entries and
retained snapshots. Five snapshots 0408 through 0412 remain. The
populated 0411-to0412 upgrade preserved 410 prior receipts and 38
companies, appended one receipt and none on replay; index/statistic
checks passed.
- The earlier P2 security failure, Greptile's former conditional
dependency on #17702, and the subsequent actual Ponytail eligibility
findings are recorded in
`doc/plans/2026-10-25-native-response-presentation-sleep-audit.md`. This
PR now includes the issue-scoped pending-effect notification fix itself,
so it is independently correct before #17702. Fresh published-head CI,
Greptile 5/5 and a clean security scan remain required. No
deployed-sleep, external-wake or fleet-savings claim is made.


## Risks

- The writer contract is process-local. Independent SQL writers and
other replicas are not covered by these notifications.
- Unpresented backlog reconstruction still has memory and time cost
proportional to candidate count. Pages contain at most 100 rows;
execution uses the shared fair batch. Selected history is excluded.
Health-only signals do not trigger reconstruction.
- Publication policy remains with its current owner. Digest, company/run
binding, source authorization, selected-answer suppression, and
ownership fences remain required.
- The rest of native recovery and governed-review presentation still run
separately. This PR does not relax Cloud sleep eligibility or add
external wake coverage.
- The stack parent has merged and its actual ancestry is reconciled.
This publication still needs fresh current-head CI and review.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, repository tools, shell
execution, and PostgreSQL tests. The runtime does not expose a more
specific model identifier or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Codex <noreply@openai.com>
2026-10-29 02:31:20 -05:00
Nicky LeachandPaperclip e8b78cce5b Isolate browser fixtures and reserve HTTPS test ports (#18128)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/234/changes/paperclip/234
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip manages agents and their tasks.
> - CI verifies runtime setup and task execution in browsers.
> - Shared fixtures and port collisions can fail unrelated changes.
> - Copying configuration during navigation can observe incomplete
state.
> - This pull request isolates fixtures and waits for completed reloads.
> - These changes make the existing checks more reliable.

## Linked Issues or Issue Description

Extracted from #18050 so test stability can be reviewed on its own.
Searches for signoff fixture and HTTPS backfill port fixes found no
separate duplicate of these three edits.

**What happened?**

The signoff suite shares company and agent state across scenarios. The
HTTPS backfill fixture probes only one listener and can select ephemeral
client ports. The YAML reload test reads before navigation and reload
readiness are complete.

**Expected behavior**

Each scenario has its own state. Both app and HMR ports are available.
The YAML test reads after the canonical route and reload action are
ready.

**Steps to reproduce**

Run the signoff scenarios in sequence, run the HTTPS backfill test with
other local sockets, or run the YAML lost-response reload case during
navigation.

## What Changed

- Create and clean up signoff company and agent fixtures for each
scenario.
- Probe both app and HMR ports below the ephemeral client range.
- Wait for the canonical agent route and enabled reload action before
checking the saved document.

## Verification

- These exact fixture changes passed the selected HTTPS test and all 12
YAML/signoff browser cases in the combined change. Those results apply
to that earlier source.
- Fresh local checks and CI for this isolated branch are pending. No
full pass is claimed for this new head yet.
- No production source or dependency change is included.

## Risks

Test isolation creates more fixture companies. Each case cleans its
fixtures. Product behavior and assertions stay the same. No user
documentation change is needed.

## Model Used

OpenAI Codex, based on GPT-6, with reasoning, repository tools and code
execution. The exact serving snapshot is not exposed.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [ ] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-28 23:15:10 -07:00
a8a038e659 fix(server): schedule native pending effect recovery (#17690)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Native status decisions store effect targets and a delivery ledger.
> - Historical pending or failed effects still need recovery.
> - The periodic finalizer queries that ledger even when work is
complete.
> - This pull request gives pending effects their own commit-driven
worker and saved deadlines.
> - Completed history becomes quiet while incomplete effects remain
recoverable.

## Linked Issues or Issue Description

Refs #17687 (merged). This is slice 47 of the sleep migration stack, now
based on master.

**What problem does this solve?**

Periodic native finalization repeatedly checks effect delivery. A tenant
with completed history should not perform recurring SQL for this duty.
Historical unresolved effects must still recover without duplicating
their targets.

**Proposed solution**

Reconstruct current pending effects at startup. Wake from committed
coordinator changes. Use the saved retry and ownership deadlines. Keep
the existing dispatcher as the only recovery mutation owner.

**Alternatives considered**

A slower unconditional scan still creates idle traffic. A new queue
table duplicates existing durable state. Replaying materialization can
duplicate effects. This change uses the existing ledger, transaction
signals, and shared scheduler.

## What Changed

- Add a scoped worker with 100-row discovery pages and fair 25-entry
dispatch batches. Delivered, superseded, and terminal-failure history
has no recurring scan.
- Preserve exact company/issue/run/decision binding and validate
materialized targets before settling effects. Recheck phase, saved
result, retry, and lease under the coordinator lock. Missing targets
retain recovery.
- Notify from decision replay, accepted-result recovery, coordinator
claim/retry/release, attention replay, and execution-control recovery.
Only two DB-only producer writes need a new transaction wrapper. Nested
transactions use the existing outer-commit boundary.
- Exclude pending-effect candidates from periodic finalization so it
cannot skip ahead of their owner. Keep explicit and startup recovery
behavior compatible. Respect maintenance disablement, drain, standby,
and shutdown.
- Add concurrent, idempotent migration 0411 with partial indexes for
pending effects and their current coordinator binding. Retain the five
newest schema snapshots.
- Document producers, query evidence, failure history, and scope in
`doc/plans/2026-10-25-native-pending-effects-sleep-audit.md`.

## Verification

- Source `ba38ee465df02b6026286b5d5e15ae49fe07a367` passes all 2284
distinct cases across 25 complete files, without skips. The main
selection passes 2225 in 203.94 seconds; safe-replacement passes 59 in
26.03 seconds. Coverage includes all 968 native-session cases, the
94-case status-authority/pending-effect corpus, actual decision/lease
producers, Stop, queue, interaction, reconstruction and Slack consumers.
The audit gives per-file counts.
- The complete 94-case corpus passes again on the same database in 16.03
seconds. Retained PSC/OUT rows and an unrelated sentinel remain
unchanged. The repeat is not counted again as distinct coverage.
- Twenty-one separate fresh PostgreSQL 17 databases migrate through 0411
before setup. Four embedded-only fixture imports temporarily use their
own external database on this IPC-exhausted host and are restored byte
for byte. Assertions and timing limits stay unchanged. This qualifies
external-database behavior; it does not claim an unmodified embedded CI
run.
- Database build, server typecheck/build, module boundaries and
exact-head migration order pass. Original runtime/schema edits and
unrelated upstream blobs are preserved. Both original concurrent index
statements, all prior executable history, journal entries and retained
snapshot bytes are unchanged; five snapshots 0407 through 0411 remain.
- Populated 0410-to0411 upgrade preserves all 409 prior migration
receipts and 38 companies, appends one receipt and adds none on replay.
Both indexes are valid and ready on fresh and upgraded databases.
- Adopting the latest prepared prerequisite changes ancestry and parent
audits only. All accepted core trees remain identical. The audit retains
earlier failures and qualifications. Actual landed-parent ancestry is
now reconciled; fresh published-head CI and exact-head Greptile 5/5
remain required. No deployed sleep, Cloud-wake or fleet-cost claim is
made.

- Current parent context: integration
`5f7cd7bc589ad0169dfb5f33df611ead56510ca3` changes only the parent's
GitHub observation bound and independent cleanup assertion. All
production code, packages and 25 accepted test files remain unchanged.
Both focused GitHub idle cases pass in 15.26 seconds and the complete
six-case cleanup suite passes in 8.47 seconds on two fresh 0411
PostgreSQL fixtures. This does not claim the full parent workflow was
rerun here.

## Risks

- A missing producer can delay work until restart. The audit covers
current supported writers. Independent SQL and other processes remain
outside the local notification contract.
- Recovery validates existing targets; it cannot recreate a missing
target or silently mark it delivered. Such work retains an error and
retry.
- The indexes add write/storage cost and use the existing restart-safe
concurrent migration runner.
- Other finalization duties still poll until their separate migrations.
This PR does not prove host/database suspension, extend Cloud alarms, or
claim fleet savings.
- The actual prerequisite squash is adopted through a normal merge. Its
complete tree equals the reviewed parent, and the complete accepted
child tree is preserved. Fresh published-head CI and review remain
required.

## Model Used

OpenAI Codex, based on GPT-6, with reasoning and code-execution tools.
The exact serving model ID and context-window size are not exposed in
this session.

## Checklist


- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Codex <noreply@openai.com>
2026-10-29 00:28:00 -05:00
DottaandPaperclip 4e715eb7ea fix(server): schedule historical unsafe export recovery (#17687)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Native runs can retain accepted results after an unsafe workspace
export fails.
> - Historical recovery can retire an old notice or resume the accepted
result without another provider turn.
> - The periodic reaper repeatedly scans failures that cannot currently
recover.
> - Existing rows and committed changes can identify the actual recovery
obligation.
> - This pull request wakes recovery from those changes and retries only
owed work.
> - Dormant history becomes quiet while ownership and explicit operator
decisions remain protected.

## Linked Issues or Issue Description

**What happened?**

The native finalization reaper repeatedly visits historical unsafe
workspace-export failures. Cancelled tasks, newer runs, changed
contracts, and explicit operator decisions can make those rows
permanently ineligible. They still produce periodic database reads.

**What did you expect?**

Retire stale unsafe-export notices and recover eligible accepted
results. Stop reading dormant history until a relevant committed change
occurs. Keep a retry while a real obligation is blocked by ownership or
a transient failure.

**Steps to reproduce**

Retain an unsafe-export terminal failure whose task is cancelled or
superseded. Leave the instance idle after startup. The periodic reaper
continues reading that history.

Prerequisite #17680 is merged into master. Related: #14402 established
safe export finalization; #14329 was an earlier historical recovery
proposal. #17679 owns separate policy-review cleanup. This PR changes
only historical unsafe-export scheduling and its producers.

## What Changed

- Register a scoped worker through the existing coordinator and
scheduler. Remove this duty from periodic reaping. Preserve the
manual/startup recovery entry point.
- Distinguish stale notices, eligible accepted results, dormant history,
and concrete ownership contention. Reuse the existing mutation owner and
lock order. Preserve explicit settlement vetoes and exact
result/contract identity.
- Signal relevant task, run, action, and deletion writes before they
commit. Existing transaction boundaries handle nested commits and
uncertain outcomes. Notifications contain only scope IDs.
- Retain a retry only for owed work. Reconstruct work at startup,
preserve drain/resume, and stop through the shared lifecycle.
- Add concurrent, idempotent partial index migration 0410 for unsafe
terminal failures. Keep the five newest generated schema snapshots.
- Document producer coverage, query plans, supported writer boundaries,
and test failures in the unsafe-export audit.

## Verification

- Source `2a13dd08a6cc52f0adab09e3df9ce31e97b746b9` passes all 2188
cases across 24 complete files, without skips. The main selection passes
2129 cases in 192.58 seconds; safe-replacement passes 59 in 26.04
seconds. Coverage includes all 968 native-session cases, real
export/action producers, explicit continuation, workspace
reconstruction, interaction routing, Stop, queue and Slack consumers.
The audit gives per-file counts.
- Twenty separate fresh PostgreSQL 17 databases migrate through 0410
before setup. Four embedded-only fixture imports temporarily use their
own external database on this IPC-exhausted host, then are restored byte
for byte. Assertions and timing limits stay unchanged. This is qualified
external-database acceptance, not an unmodified embedded CI run.
- Database build, server typecheck/build, module boundaries and
exact-head migration order pass. Normal integration preserves the
complete original runtime/schema patch and unrelated upstream blobs.
Original concurrent index SQL, all prior executable history, journal
entries and retained snapshot bytes are unchanged; five snapshots 0406
through 0410 remain. Added comment removal preserves the full
non-comment TypeScript token streams.
- A populated 0409-to0410 upgrade preserves all 408 prior migration
receipts and 38 companies. It appends exactly one receipt; replay adds
none. The index is valid and ready on fresh and upgraded databases.
- The owning audit retains earlier fixture failures, skipped checks and
notice-retirement regression history. Older combined stack checks retain
their original scope in their owning audits. Actual parent
`73d24aa5acfcf17b3f676b4da7cd05eb70b60b99` is reconciled through a
normal merge. Its tree equals the reviewed ancestor and the complete
accepted child tree is unchanged. Fresh published-head CI and Greptile
5/5 remain required. No deployed sleep, fleet-cost or live provider
qualification claim is made.

- Inherited prefix correction: current integration
`8f43c9f81fac23b50997e7f0e1d0d9cf383a8109` changes only two values in a
previously unselected corpus fixture. All production code, the complete
package tree and all 24 accepted test files remain byte-identical to the
2188-case source above. The additional complete 72-case corpus passes in
14.00 seconds and again on the same database in 13.08 seconds. Retained
PSC/OUT and sentinel rows remain unchanged. The repeat is not
double-counted. The parent audit retains the original collision and
rejected cleanup attempt.

- Latest parent context: integration
`4d51231abe8b68c21ce896d0d2ac16865978c8ab` carries only the parent's
one-argument GitHub observation correction and an independent master
cleanup assertion. All production code, packages, 24 accepted suite
files and the additional corpus are unchanged. The two focused
native-presentation cases pass in 15.14 seconds and the complete
cleanup-removal suite passes all six cases in 8.31 seconds on two fresh
0410 PostgreSQL fixtures. This does not claim the full parent workflow
was rerun here.

Current head `b28399babac72ba9db1c4a4ef882c5e87aded38c` has passing CI
and Greptile 5/5 with no actionable findings. The first CI attempt lost
runners: fourteen jobs explicitly received simultaneous shutdown
signals, two reported lost runner communication, and two aggregate gates
failed downstream. One failed-job retry on unchanged source passes. The
underlying host shutdown cause remains unconfirmed; no code fix or extra
retry is claimed. [CI run and
attempts](https://github.com/paperclipai/paperclip/actions/runs/40819408528).
No Ponytail verdict is present.

## Risks

- A missing future producer can delay dormant-history discovery until
restart. The audit names current producers. Independent SQL writers and
other server processes remain outside the process-local signal contract.
- Physical ownership and uncertain operations retain retries. Time alone
does not authorize taking workspace ownership. No provider turn or
unsafe archive retry is added.
- The recovery owner remains authoritative if state changes after
discovery. Terminal UI status does not authorize resource destruction or
accepted-result replay.
- The partial index adds matching-row write/storage cost. It builds
concurrently through the existing restart-safe migration runner.
- This proves the changed worker becomes quiet. It does not prove host
suspension, external wake coverage, or fleet cost savings. Other sleep
migrations remain. This slice still requires fresh current-head CI and
reviews.

## Model Used

OpenAI Codex, based on GPT-6, with reasoning and code-execution tools.
The exact serving model ID and context-window size are not exposed in
this session.

## Checklist


- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 00:13:22 -05:00
DottaandPaperclip 73d24aa5ac fix(server): schedule automatic completion review retirement (#17680)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Native finalization preserves accepted work and resolves task
status.
> - A historical cleanup removes automatic completion-review cards that
current policy no longer creates.
> - The periodic finalization pass repeats that lookup even after all
matching cards are gone.
> - This PR gives this cleanup its own committed hints and pending-card
retries.
> - The existing owner retains withdrawal receipts and protects genuine
reviews.
> - Idle history stops causing recurring cleanup reads.

## Linked Issues or Issue Description

Refs #17679. This is a separate stacked slice for automatic
completion-review retirement. Obsolete version-change reviews belong to
the parent PR.

**What needs to be improved?**

`reconcileNativeFinalizations` repeatedly discovers old automatic
completion reviews. The discovery helper also converts SQL errors to an
empty result, which would let a new event-driven worker forget failed
reconstruction.

**Why is this improvement important?**

Idle tenants should not query for absent cleanup work. Failed discovery
must preserve the retry, and removing a historical card must preserve
the durable trigger for later evidence reassessment.

**Proposed solution**

Use the existing card, decision, effect, assessment and contract rows.
Reconstruct candidates at startup, signal the existing decision commit,
and retry exact pending cards. Keep the direct cleanup call inside
active finalization. ROADMAP.md and the related native review work were
inspected; this change owns the scheduling migration only.

## What Changed

- Add automatic completion-review registration to the shared scoped
deadline worker. Reconstruct 100-row keyset pages and dispatch fair
batches of twenty.
- Signal company/issue IDs before the native decision transaction
writes. Keep outer-transaction settlement with the existing work-signal
boundary.
- Split raw discovery from the public helper's compatibility error
handling. Worker lookup failures propagate so the shared scheduler
retains dirty scope and retry.
- Reuse the complete historical predicate and existing withdrawal owner.
Recheck the selected card identity, payload and system author fields in
the conditional update.
- Preserve the withdrawal reason, chat publication, activity record,
direct finalizer call, startup/manual recovery, and subsequent evidence
reassessment.
- Skip only this duty in periodic reaping. Retain admission,
drain/standby, retry and joined shutdown.
- Add producer/lifecycle documentation. Add no table, schema migration,
provider branch or independent timer.

## Verification

- Current source `3f4d35ac0154aedc76cc39486d3758c73b1e6ff4`: all 462
cases across seven complete files pass with no skips in 49.31 seconds.
This covers both review workers through the real status-authority
corpus, startup/timing, recovery, finalization, external chat and
governed milestones. Nested corpus fixtures are not double-counted.
- Five separate fresh PostgreSQL fixtures migrated through parent 0409
before setup. Database build, server typecheck/build, module boundaries
and target migration order pass. The whole database source tree matches
the parent; no migration or table is added.
- Normal integration preserves substantive owned edits and unrelated
upstream blobs. Actual landed-parent ancestry and fresh current-head
Greptile 5/5 and clean CI remain required. This is worker and
integration acceptance, not deployed sleep qualification.

- The inherited P2 fix changes only two fixture prefix values. All
production code, other fixtures, assertions and timing limits are
unchanged. The full 72-case corpus also passes again on the same
database in 12.95 seconds. Retained PSC/OUT rows and an unrelated
sentinel remain unchanged after both runs. The repeat is not
double-counted among the 462 distinct cases. The parent audit retains
the original collision and rejected cleanup attempt.

- CI correction: the 40f head fails the passive native-presentation
initial idle observation in chat shard 1. An unchanged local pair
passes. A controlled committed hint plus a 600 ms held run attempt makes
the original one-second observation fail; the identical probe passes
with the established five-second observation bound. This demonstrates
the coalescing boundary, not the unrecorded exact CI token timeline. No
unchanged-head CI retry was used.
- The probe is removed. The only permanent code change is that initial
poll bound. It still requires zero active work and no deadline, followed
by two minutes with no SQL, transaction or provider writes. Production
code, worker/business deadlines, rollback and committed-settlement
assertions are unchanged. All 274 cases in the named GitHub agent-review
workflow pass in 232.06 seconds. Other cases in the large file are
outside that named selection. The earlier 462-case selection retains
identical source. Both owning audits preserve the failure and scope
limits. Fresh updated-head CI and reviews remain required.

- Master integration: independent master
`49fe8b87a49aa5a8985a08dd3d5ce57bdd24756c` adds one company-skill
cleanup assertion. A normal merge preserves both complete binary
patches. All production code and the accepted GitHub integration file
are unchanged. The full six-case cleanup-removal suite passes in 8.16
seconds on fresh PostgreSQL. Database history is unchanged.

## Risks

- A normal native decision can cause one scoped lookup even when it
creates no historical card. It retains no periodic scan when settled.
- Startup reconstruction cost scales with historical data and joins. No
constant-cost or fleet-savings claim is made.
- Process-local signals cover instrumented writers. Independent SQL
writers and concurrent older controllers need explicit integration.
- Retirement and status reassessment are distinct obligations. The
existing durable withdrawal receipt and remaining finalization owner are
preserved.
- Failed withdrawals retain retries while exact pending cards remain. A
database lookup failure must not be interpreted as completion.
- Other finalization and recovery duties remain. Cloud wake coverage and
host-sleep eligibility are unchanged.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, shell tools, and PostgreSQL
tests. The runtime does not expose a more precise model ID or
context-window size for this turn.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Remote acceptance: head `be668fb975f119efeb4830405d4bb1ab65791f87` has
53 successful gates, verified with `gh pr checks` (no non-passing
checks). Greptile reviewed that head at 5/5. There are no unresolved
review threads. The PR remains draft and unmerged.

Current published head `181bf800a79449961e09c995f2785dd7f8060bb3` has
passing CI, fresh Greptile 5/5 and Ponytail 5/5 with no actionable
findings. Earlier failures remain recorded in the audits.

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-28 23:40:45 -05:00
lorenzozaneandAndrew Aymeloglu 49fe8b87a4 test: assert company skills are removed during company cleanup (#13490)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Company removal must remove company-owned database rows.
> - The cleanup path already removes company skills.
> - The existing test creates a company skill but does not check its
removal.
> - This pull request adds that missing assertion.
> - The assertion guards the company cleanup contract.

## Linked Issues or Issue Description

Refs: #3038

Supersedes #13240. This PR restores the original change after its branch
was deleted.

## What Changed

- Assert that no company_skills rows remain after company removal.

## Verification

- The cleanup-removal-service.test.ts suite passed all four tests in CI
run 35006708817.
- That run failed in execution-control-reconciliation.test.ts and
composer-stop.spec.ts.
- Those failures concern code outside this one-line test change.
- CI must run again after the branch update.
- No local test run has been completed during adoption.

## Risks

- Low risk. This change adds one test assertion and changes no
production code.

## Model Used

- Adoption assistance: OpenAI Codex, based on GPT-6, with code review,
shell tool use, and GitHub inspection.
- The exact backend model ID and context window are not exposed in this
session.
- This assistance covers CI diagnosis, this description update, and
branch integration.
- The original author's model use was not disclosed.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [ ] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [ ] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` /
`Closes: #` / `Refs: #` OR (b) described the issue in-PR following the
relevant issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [ ] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [ ] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Andrew Aymeloglu <aaymeloglu@gmail.com>
2026-10-28 23:20:13 -05:00
DottaandPaperclip dfd5b1ac62 fix(server): wake obsolete policy review cleanup from commits (#17679)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Native finalization repairs saved results and related task state.
> - Its periodic pass also searches for obsolete policy-review cards.
> - Those cards have a precise historical signature and existing durable
rows.
> - This PR gives that cleanup its own committed signals and
pending-work retries.
> - The existing owner still protects real reviews and later task
changes.
> - Settled review history no longer causes repeated cleanup queries.

## Linked Issues or Issue Description

Refs #17677. This PR is stacked on cancelled workspace preservation. It
owns only obsolete policy-review cleanup within the native finalization
reconciler.

**What needs to be improved?**

Every periodic native finalization pass queries for old version-change
review cards, even after all such cards are gone. The parent reaper
combines this cleanup with unrelated finalization and recovery duties.

**Why is this improvement important?**

Empty queries prevent idle tenants from becoming quiet. Removing the
query must preserve historical repair, real review requests, task status
authority, and cleanup after a failed write.

**Proposed solution**

Reconstruct matching pending cards at startup. Signal the existing
native decision transaction before its writes. Schedule bounded cleanup
only while an exact card remains pending. Skip this duty in periodic
reaping while keeping startup and manual entry points. ROADMAP.md and
related PR search found no duplicate of this migration.

## What Changed

- Register obsolete-review cleanup with the existing scoped deadline
worker. Reconstruct in 100-row keyset pages and process fair batches of
twenty.
- Use company/issue hints from the existing status-decision commit
boundary. Serialize only the two IDs; preserve outer commit and
rollback.
- Reuse the exact historical signature and existing cleanup owner. Keep
status-version, decision-pointer, separate-review, activity and
chat-publication guards.
- Recheck selected payload and system-card identity in the conditional
withdrawal so a concurrent edit cannot be cancelled from a stale
snapshot.
- Retain a 30-second retry only while a matching pending card survives.
Preserve drain, standby, startup and joined shutdown.
- Skip only this duty in the periodic finalization pass. Automatic
completion reviews, unsafe exports, status effects, evidence
reassessment and workspace finalization remain separate migrations.
- Add the owner audit and validated external-test database support for
the existing status-authority corpus. Add no schema, table, independent
timer or provider branch.

## Verification

- Current source `4cc0d03ae96bd92a4fdad44168c2a8647d42466c`: all 443
cases across seven complete files pass with no skips in 46.46 seconds.
This covers the full status-authority corpus and cleanup worker,
startup/timing, heartbeat recovery, native finalization, external chat
and governed milestones. The audit gives per-file counts without
double-counting fixtures inside the corpus matrix.
- Five distinct fresh PostgreSQL fixtures migrated through parent 0409
before setup. Database build, server typecheck/build, module boundaries
and target migration order pass. The whole database source tree matches
the parent; no migration or table is added.
- Normal integration preserves substantive owned edits and unrelated
upstream blobs. The earlier circular notification-payload failure
remains in the audit. Actual parent
`51c3f8924cb0bd5fe7cbda15ad9b8f06a6a11055` is reconciled through a
normal merge, with its full tree equal to the reviewed ancestor and the
entire accepted child tree unchanged. Fresh current-head Greptile 5/5
and clean CI are still required. No deployed sleep qualification is
claimed.

- Review correction: the old head reproduces a fixed-prefix collision on
a same-database corpus rerun. The initial deletion attempt passed
assertions but failed teardown on non-cascading audit foreign keys; it
was removed. The final two-value change uses each fixture company UUID
in its prefix and changes no production behavior, assertions, timing
limits or teardown.
- The complete 56-case corpus passes a second time on the same database
in 10.15 seconds. Retained PSC/OUT rows and an unrelated sentinel
company remain unchanged after both runs. The repeat is not
double-counted among the 443 distinct cases. The audit retains both
failures and their causes. Fresh CI and Greptile are required for the
updated head.

## Risks

- Startup reconstruction still scans historical candidates and joins;
its cost scales with history. Scoped commits use existing indexes. No
recurring query remains after this worker settles.
- The signal covers instrumented single-process writes. Independent SQL
writers and concurrent older controllers need explicit integration.
- A normal native decision can cause one scoped lookup, even when it
creates no obsolete review. It does not retain a periodic scan.
- Failed withdrawals retain retries while matching cards remain. Actual
cleanup still uses the existing locking, authority and activity owner.
- Other finalization duties still run. This PR does not establish
whole-instance quiet, external alarm coverage, provider suspension or
fleet savings.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, shell tools, and PostgreSQL
tests. The runtime does not expose a more precise model ID or
context-window size for this turn.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Current published head `9aa67199da64d700fd6230829d38f2ef522a07fe` has
fresh Greptile 5/5, Ponytail 5/5 with an unconditional ship verdict, and
all current CI checks passing or skipped. The reproduced rerun P2 is
fixed and its thread is resolved.

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-28 22:53:19 -05:00
DottaandPaperclip 51c3f8924c fix(server): schedule cancelled workspace preservation (#17677)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - A cancelled native run may still owe preservation of prepared
workspace files.
> - The existing recovery receipt and source lease record that
obligation.
> - The orphan reaper still searches for these cancellations on every
pass.
> - This PR registers committed cancellations with the shared deadline
worker.
> - The existing retention owner keeps file pinning and ownership
checks.
> - Idle and completed history no longer causes this preservation scan.

## Linked Issues or Issue Description

Refs #17674 and #17145. Stopped instruction collection is merged into
master. It owns file-preservation discovery only. The existing
environment cleanup worker continues to own stop-only teardown.

**What needs to be improved?**

`preserveCancelledNativeWorkspaces` runs from every orphan-reaper pass.
It queries even when no cancelled native workspace needs a file-recovery
hold. Current foreground Stop can also defer retention after a lock or
database failure, so startup-only recovery would be insufficient.

**Why is this improvement important?**

Empty queries keep idle tenants active. Removing them must not lose user
files, weaken Stop ownership, replay cancelled work, or turn a retained
allocation into destructive cleanup.

**Proposed solution**

Register the existing durable obligation from committed run-status,
cancellation-acknowledgement and workspace-reference writes. Reconstruct
it at startup. Keep retries while actual preservation remains
unresolved. Disarm after the existing owner records the hold. Related-PR
search and ROADMAP.md review found no duplicate of this scheduling
migration.

## What Changed

- Add a company/run-scoped preservation worker with 100-row keyset
reconstruction and fair batches of five.
- Separate pending file debt from immediate coordinator/lease readiness.
Retain a 30-second retry for known unfinished preservation and shared
failure backoff for errors.
- Signal the existing status, acknowledgement, workspace-reference,
deletion and settings transactions. Add no table or independent timer.
- Keep exact source checks, no-workspace contracts, task/coordinator/run
lock order, retention receipt and no-replay recovery card with their
owners.
- Recheck cancellation acknowledgement, run status and coordinator phase
under the retention locks. Preserve the existing foreground preterminal
API.
- Keep startup/manual recovery; skip only this duty in periodic reaping.
Preserve drain/standby and shutdown behavior.
- Add concurrent, replay-safe partial index migration 0409 and retain
the five newest snapshots.
- Add the producer and lifecycle audit in
`doc/plans/2026-10-25-cancelled-workspace-preservation-sleep-audit.md`.

## Verification

- Current source `21b46a8e4293ca670235117458b984493a181759`: all 1472
cases in 16 complete files pass without skips. The owner passes 84 cases
in 14.93 seconds. Fifteen consumer files pass 1388 cases in 133.46
seconds, including all 968 native-session cases and Stop, dispatch,
restart, workspace-sync and upgrade-readiness coverage.
- Twelve separate fresh PostgreSQL 17 databases migrated through 0409
before setup. The embedded-only lifecycle fixture temporarily used its
own external database on this IPC-exhausted host and was restored byte
for byte. Assertions and timing limits stayed unchanged. This qualifies
external-database behavior; it does not claim an unmodified embedded CI
run.
- Database build, server typecheck/build, module boundaries and
exact-head migration order pass. The complete original runtime/schema
patch and unrelated current-parent blobs are preserved. Original
concurrent index SQL, all earlier executable history and retained
snapshot bytes are unchanged; five snapshots 0405 through 0409 remain.
- A populated 0408-to0409 upgrade preserves all 407 prior receipts and
38 companies. Exactly one receipt is appended; replay adds none. The
preservation index is valid and ready on fresh and upgraded databases.
- Actual parent `82529741418e138d9d623bf13d2fa22c1ff79d36` is merged
through a normal ancestry reconciliation. Its complete tree equals the
reviewed parent. The entire accepted child tree and all source hashes
are preserved. The audit retains earlier failures, qualifications and
per-file counts. Published head
`b34f0589847f33754ecde9413fd36bf007353d2c` has Greptile 5/5 and all 57
checks passing or skipped. No Ponytail review is present. These checks
do not establish deployed host/database suspension or Cloud alarm
delivery.

## Risks

- Signals cover instrumented single-process writers. Independent SQL
writers and additional replicas need integration.
- Status signals may inspect a run without relevant file debt once. They
do not create recurring work. Discovery and memory still scale with
actual candidates.
- Missing ownership or stop evidence remains pending. Active retries are
intentional while a concrete file obligation is unresolved.
- Retry timing is process-local; startup reconstructs durable debt. The
worker does not overwrite another native-finalizer deadline.
- Admitted database operations may finish after drain begins. Shutdown
joins them. Provider teardown remains with the existing cleanup owner.
- The partial index adds storage and write cost. Its concurrent
migration uses the existing interrupted-index repair path.
- Cloud alarm coverage, sleep eligibility and host suspension are
unchanged. This proves worker behavior, not fleet savings.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, shell tools, and PostgreSQL
tests. The runtime does not expose a more precise model ID or
context-window size for this turn.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-28 22:27:11 -05:00
DottaandPaperclip 8252974141 fix(server): schedule stopped instruction collection (#17674)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Runs can stop while their private instruction edits still need
collection.
> - Existing copy rows and stop evidence describe that unfinished work.
> - The orphan reaper still queries for it on every maintenance pass.
> - This PR activates collection from committed copy and run
transitions.
> - It uses saved retry deadlines when stop proof or collection remains
pending.
> - Active copies and completed history no longer cause collection
polling.

## Linked Issues or Issue Description

Refs #17671 and #17670. Both prerequisites are merged into master.
Captured saves and post-save release remain separate reasons with their
own workers.

**What needs to be improved?**

`recoverStopped` queries instruction copies on every orphan-reaper pass,
even when no terminal run owes collection. A run can become terminal
without changing its copy row, so copy-only notifications would miss
real work.

**Why is this improvement important?**

Repeated empty queries prevent idle tenant instances from becoming
quiet. Removing them must preserve edits, stop proof, current ownership,
and recovery after restart.

**Proposed solution**

Use the existing transaction signals, scoped deadline worker, and
scheduler. Reconstruct eligible copies at startup, signal supported copy
and terminal-run writers, and retain saved retry deadlines for
unresolved work. Preserve the existing collection and directory owners.

Related PR search found the warm agent-file ownership work (#14695),
verified stop boundary (#14311), and task-workspace cleanup (#16464).
This PR does not replace those contracts. ROADMAP.md has no duplicate
migration.

## What Changed

- Add scoped stopped-instruction collection with keyset reconstruction
and fair batches of 20.
- Signal before copy preparation, mutation and adoption writes, and
before terminal run writes in their existing transactions.
- Cover heartbeat, native finalization/restart/session recovery,
execution-control, queue and dispatch producers.
- Signal settings changes and company/agent deletion. Preserve drain,
standby, restart and shutdown ownership.
- Recheck terminal-run eligibility in the due-time claim. Keep terminal
status separate from process-stop proof.
- Retain existing stop checks, attempt limits, saved candidate bytes and
remote-resource fencing.
- Skip only this lane in periodic orphan recovery. Preserve
manual/startup recovery.
- Add concurrent, replay-safe partial index 0408 and retain the five
newest snapshots. Add no table.
- Record the owner and producer audit in
`doc/plans/2026-10-25-stopped-instruction-collection-sleep-audit.md`.

## Verification

- Source `cb2818a8f46ef961f744977a258f0e9042e31a42`: all 1469 cases
across 14 complete files pass without skips in 141.69 seconds. This
includes all 968 native-session cases, filesystem saves, startup,
terminal-run producers, dispatch, queue, execution-control, finalization
and lifecycle.
- Eleven separate fresh PostgreSQL 17 databases migrated through 0408.
The embedded-only lifecycle fixture temporarily used its own external
database on this IPC-exhausted host and was restored byte for byte.
Assertions and timing limits stayed unchanged. This qualifies
external-database behavior; it does not claim an unmodified embedded CI
run.
- Database build, server typecheck/build, module boundaries and
exact-current migration order pass. The original concurrent index SQL is
unchanged. All prior executable migration history, journal entries and
retained snapshot bytes are preserved; the five newest snapshots are
0404 through 0408.
- A populated 0407-to0408 upgrade preserves all 406 prior migration
receipts and 38 companies. It appends exactly one receipt. Replay adds
none. The collection index is valid and ready on fresh and upgraded
databases.
- The normal merge of actual parent
`267842fc3c6e6542deed8a1bcc2c78bec8df7862` preserves both complete
patches, all independent sidebar changes from #18117, and the full
accepted server/package/test trees. The complete sidebar test file
passes all 36 cases on the combined tree. React act warnings remain.
- Prior failures and fixture qualifications remain in the audit.
Published head `d176d731f083c7edd2ede688cb901d1e66d8f1d8` has Greptile
5/5, all 57 checks passing or skipped, and no unresolved review threads.
No Ponytail review is present. These local tests do not establish
deployed host/database suspension or Cloud alarm delivery.

## Risks

- Process-local signals cover instrumented writers. Independent SQL
writers and additional replicas still need integration.
- Terminal-run signals can cause one scoped inspection even if no
instruction copy exists. They do not create a recurring scan.
- Reconstruction and memory scale with actual pending candidates; active
candidates are filtered by the run join.
- Admitted file/provider operations can outlive a later drain request.
Shutdown joins them. Uncertain ownership remains pending rather than
being discarded.
- The partial index adds storage and write cost. Its concurrent
migration uses the existing interrupted-index repair path.
- Cloud alarms, sleep eligibility and provider suspension are unchanged.
Worker quiet is not a claim of deployed host/database sleep or measured
savings.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, shell tools, and
PostgreSQL/filesystem tests. The runtime does not expose a more precise
model ID or context-window size for this turn.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-28 22:13:57 -05:00
DottaandPaperclip 267842fc3c fix(server): schedule owed agent directory cleanup (#17671)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Agent runs can save their directory before temporary-file cleanup
finishes.
> - The existing receipt records stop proof and unfinished cleanup.
> - The orphan reaper still searches for this debt on every maintenance
pass.
> - This PR activates cleanup from committed changes and saved retry
deadlines.
> - The directory owner keeps its resource checks and file lock.
> - Settled directory history no longer causes recurring cleanup
queries.

## Linked Issues or Issue Description

Refs #17670, the merged captured-instruction commit slice. This PR
targets master. It does not include stopped instruction collection or
change the saved-file contract from #14695.

**What needs to be improved?**

The post-save part of `recoverCaptured` queries directory copies on each
orphan-reaper pass, even after all temporary directories have been
released.

**Why is this improvement important?**

Empty database work prevents idle tenant instances from becoming quiet.
Cleanup must still survive a crash after a save and preserve files when
stop or resource ownership is uncertain.

**Proposed solution**

Use existing copy receipts as the source of truth. Notify the shared
coordinator inside relevant copy-write transactions. Reconstruct pending
work at startup and register each saved retry deadline. Keep physical
cleanup in the directory owner. Add a partial index over unfinished
cleanup rather than a new queue table.

Related-PR search found workspace archive and SSH task-workspace cleanup
changes (#17175 and #16464). They own different resources and do not
replace this stopped agent-directory receipt recovery. ROADMAP.md has no
duplicate migration.

## What Changed

- Add a scoped directory cleanup worker with keyset discovery and
batches of 20.
- Signal relevant copy transitions, company/agent deletion, and worktree
execution policy changes.
- Preserve the due-time claim, current receipt read, directory lock,
stop proof, and exact remote-resource checks.
- Read the receipt after release; a returned promise does not establish
cleanup completion.
- Keep unresolved cleanup on its saved retry or shared failure backoff.
Final receipts disarm the worker.
- Register the worker during startup and skip only this lane in periodic
recovery. Keep manual recovery compatible.
- Add concurrent, replay-safe partial index migration
`0407_greedy_star_brand.sql`. Retain the five newest schema snapshots.
- Add the producer audit and lifecycle evidence in
`doc/plans/2026-10-25-directory-cleanup-sleep-audit.md`.

## Verification

Published head: `210fcb1215a3b5e5ed84e420ddb73ab5952d9365`. Source
acceptance: `70a6800eea874bdb87685bf6eea66de79c48b577`. Parent #17670
landed as `b294de546bf9cd3a8578a7a66d7e8ec0eb939799`; normal
squash-ancestry reconciliation preserves the entire accepted descendant
tree. Final follow-ups change audits only.

- All 284 cases in six complete filesystem, startup and heartbeat owner
files pass, without skips, in 48.88 seconds. Four unused fresh
PostgreSQL 17 databases migrated through 0407 isolate destructive
fixtures.
- Three fixtures use supported external database paths. The
embedded-only lifecycle fixture temporarily uses its own external
database on this IPC-exhausted host, then is restored byte for byte. All
assertions and original timing limits remain unchanged. This qualifies
the local result; CI must still pass with the original embedded fixture.
- Actual database build, server typecheck/build, module boundaries and
exact-current migration order pass. The original concurrent idempotent
index SQL bytes are unchanged. All prior executable migration history,
journal entries and retained snapshots stay intact. The five snapshots
are 0403 through 0407.
- Populated 0406-to0407 upgrade preserves all 405 old receipts and all
38 companies, adds exactly one receipt and adds none on replay. The
cleanup index is valid and ready on fresh and upgraded databases. The
entire current database tree equals the source used for this proof.
- Both complete original and upstream patches are preserved. The actual
parent squash tree equals the already-adopted reviewed parent; resolving
eleven duplicate-ancestry text conflicts leaves the whole accepted tree
unchanged, not just selected files. Complete server, package, UI and
test trees still match the 284-case source acceptance.
- The audit retains earlier ownership, stopped-resource, receipt,
fixture and local-runner failures. The no-projects build filter was not
counted as a build pass; corrected actual build and complete reruns
passed before publication. Old draft review scores do not count for this
new head.
- Current-head Greptile gives 5/5 with no actionable findings, and all
57 checks pass. These checks establish worker behavior, not deployed
host/database suspension or measured savings.

## Risks

- Signals cover the existing single-process writer model. Independent
SQL writers and replicas need separate integration.
- The worker retains identifiers for actual pending work. Its index
excludes completed history but does not make large pending backlogs
free.
- File/provider cleanup can outlive an admission change once started.
Shutdown joins admitted operations. Unknown remote ownership remains
pending and no replacement environment is acquired for cleanup.
- The partial index adds storage and write cost. Its concurrent
migration uses the existing interrupted-index repair path.
- Cloud alarm coverage and host-sleep safety remain unchanged. This
establishes worker quiet, not deployed host/database suspension or
measured savings.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, shell tools, and
PostgreSQL/filesystem tests. The runtime does not expose a more precise
model ID or context-window size for this turn.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-28 21:51:47 -05:00
DottaandPaperclip b294de546b fix(server): recover captured instruction saves from committed deadlines (#17670)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - A stopped run can leave captured instruction edits waiting for a
persistent save.
> - Existing working-copy records retain the candidate bytes, attempt
count, and retry deadline.
> - The orphan reaper scans those records on every heartbeat, even when
no save is due.
> - This PR wakes the existing save owner after committed changes and at
saved deadlines.
> - The worker preserves permissions, conflicts, and bounded retries,
then becomes quiet.

## Linked Issues or Issue Description

Refs #17667, the merged preceding PR in this recurring-server-work
stack. This PR targets master. Related warm-file ownership work: #14695.
Its process-stop and retained-directory guarantees remain with their
existing owner. The dedup search found no equivalent captured-save
scheduling migration.

**What happened?**

The commit portion of `recoverCaptured` runs inside the periodic orphan
sweep. Prepared copies, completed history, conflicts, and exhausted
candidates do not need repeated save discovery. A saved candidate does
need recovery after restart or a failed foreground save.

**Expected behavior**

Committed candidate changes reactivate recovery. The worker honors the
saved deadline and existing three-attempt bound. It stops querying after
settlement or deliberate conflict/exhaustion. Permission checks and
canonical save semantics remain in the revision service.

**Steps to reproduce**

1. Start a server with heartbeat scheduling enabled and no captured save
pending.
2. Observe repeated pending-commit queries from the orphan reaper.
3. Capture edited instructions and fail their first canonical file
replacement. The durable candidate must be saved after its retry
deadline without starting a provider.

**Paperclip version or commit**

Reviewed parent `405e533394b26215e22d0452e9b0207d3f784a79`. Actual
parent squash and current master baseline
`27270e9bf8b7a294cf03f8b84f4857f1b1ff05c7`.

**Deployment mode**

Self-hosted server with the existing single-process transaction signal
model. Local verification uses PostgreSQL 17 and actual managed
instruction files.

## What Changed

- Preserve foreground instruction-save ownership and its failure
deadline before recovery spends another attempt.

- Add a bounded captured-commit worker inside the instruction-copy
owner. Existing rows and deadlines supply its state. No new table,
migration, or external scheduler is added.
- Signal writes entering or leaving pending commit from the existing
copy mutation boundary. Only these writes gain a short transaction. File
collection, file replacement, and provider operations stay outside that
new transaction.
- Signal company/agent deletion and worktree execution setting changes.
Preserve drain, standby, startup reconstruction, shutdown join, and
uncertain-transaction handling through the shared coordinator.
- Guard attempt claims with current copy ownership and a still-due
deadline. A concurrent writer that postpones the retry wins without
consuming an attempt. Manual/startup recovery uses the same guarded
owner.
- Remove only captured commits from periodic reaping. Stopped collection
and the separate post-save directory cleanup sweep remain for later
slices.
- Add real producer, file, transaction, concurrency, and lifecycle
tests. Add guarded external test databases to the two filesystem suites
so they can run where embedded PostgreSQL is unavailable.

## Verification

Published head: `915ef6f20a68fffe89711cc97a6196521ea9885d`. Source
acceptance: `9fb75e508f06b05b740099403ce021a61e7c6603`. The actual
#17667 squash ancestry is recorded by a normal merge. Its entire result
tree equals the prior accepted descendant tree; the final commit changes
the audit only.

- All 268 cases in six complete files pass, without skips, in 41.89
seconds on the updated parent. Coverage includes captured saves,
directory consumers, startup, instruction-copy lifecycle boundaries,
recovery and run lifecycle.
- Four unused fresh PostgreSQL 17 databases migrated through parent 0406
isolate the destructive fixtures. Three use supported external URL
paths. The embedded-only lifecycle fixture temporarily uses its own
external database on this IPC-exhausted host, then is restored byte for
byte. Assertions and original timing limits are unchanged. CI must still
pass with the original embedded fixture.
- Actual database build, server typecheck/build, module boundaries and
exact-current migration order pass. Commands select each operation by
name. The earlier local no-projects filter error remains recorded and is
not treated as a build pass.
- The normal parent merge preserves both complete added/removed patches
and every unrelated upstream blob. The entire database subtree is
parent-identical, with no owned schema or migration changes. New parent
worker behavior has current consumer/startup acceptance here and
separate owner acceptance in #17667.
- Earlier foreground ownership, postponed deadline, attempt cap, drain
hold, fixture and skipped-test findings remain in the audit. The prior
head's Greptile 5/5, Ponytail 5/5 and green CI are historical after this
new publication.
- Current-head Greptile and Ponytail both give 5/5. All 58 checks pass.
Prior stacked-head scores are historical; the new published SHA requires
fresh gates. These checks do not establish deployed host/database
suspension or external wake delivery.

## Risks

- Signals cover supported in-process writers. Independent SQL writers
and other replicas require a separate ingress contract. Startup
reconstructs persisted obligations.
- Exhausted candidates stay preserved under the existing policy; the
worker does not increase retry limits or silently discard saved edits.
Database reconstruction failures retain shared backoff.
- Inventory pages scalar fields but retains candidate identifiers in
memory. The query-plan result covers completed history, not a
constant-cost promise for arbitrary exhausted-pending history.
- File saves can outlive a stop request once admitted. Shutdown joins
them. Exact-byte replay and current authorization remain with the
revision owner.
- Other instruction recovery duties and other stack blockers remain.
This PR does not prove host suspension, database suspension, or external
wake delivery. An ordinary protected merge is authorized only after
current review and CI gates pass.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, shell tools, and local
PostgreSQL/filesystem tests. The runtime does not expose a more precise
model identifier or context-window size for this turn.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge


Review follow-up: remove seven newly added comment lines to satisfy
CONTRIBUTING.md, preserving the explanations in the owning audit. Both
changed files retain the exact non-comment TypeScript token stream;
other source bytes are unchanged. The original cffe server-shard-9 run
ended after a runner shutdown signal and cancellation, without a final
assertion verdict; that failure is retained and not counted as a pass.
No old-head retry is requested. Fresh current-head CI and Greptile are
required.

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-28 21:29:02 -05:00
DottaandPaperclip 27270e9bf8 fix(server): wake interrupted retry cancellation from committed intent (#17667)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - A parked scheduled retry has no executor to finish an interrupted
Stop request.
> - Its saved cancellation fence already records the work that remains.
> - The orphan reaper currently scans for that work on every heartbeat,
including idle periods.
> - This PR registers the existing records with the shared delivery
scheduler and wakes recovery after committed writes.
> - Recovery keeps the existing cancellation guards and settlement
behavior, then becomes quiet.

## Linked Issues or Issue Description

Refs #17666, the merged preceding PR in the recurring-server-work
migration stack. This PR targets master. Related cancellation work found
in the dedup search: #12301 and #7340. This PR changes the trigger for
interrupted parked-retry cancellation; it does not replace their
cancellation or retry policies.

**What happened?**

The periodic orphan reaper queries scheduled retries with cancellation
fences even when no cancellation needs recovery. Its first-20-row scan
can also stop behind malformed evidence.

**Expected behavior**

Committed cancellation intent wakes bounded recovery. Failed work
retains a retry. Startup reconstructs durable work. Empty or settled
work performs no recurring SQL for this duty.

**Steps to reproduce**

1. Start a server with heartbeat scheduling enabled and no interrupted
retry cancellations.
2. Observe the orphan reaper repeatedly query for cancellation fences.
3. Cancel a scheduled retry and fail the final status write after its
fence commits. Recovery must complete the existing Stop request without
running a provider or dropping its metadata.

**Paperclip version or commit**

Current parent squash `7afee8f0622e273d10506b0febfb68f143d168b1`. Source
acceptance `66107ae0a7ad85fd0476f91c4f8f98ae74a7a048`.

**Deployment mode**

Self-hosted server with the existing single-process transaction signal
model. Local evidence uses PostgreSQL 17.

## What Changed

- Add one domain-owned recovery worker over existing heartbeat run rows.
No new table. It delegates to run control and preserves original
cancellation, budget, and operator metadata.
- Signal cancellation fences, lifecycle transitions, dispatch
deferral/promotion/suppression, relevant settings changes, and deletion
within their owning transactions. Wrap only the ordinary database fence
in a short transaction; provider calls stay outside it.
- Keep startup/manual recovery compatible and remove this duty from the
periodic orphan sweep. Other reaper duties remain for separate PRs.
- Extend the shared scoped worker to retain pending work with a
memory-only admission retry while its owner is paused. Without pending
work, it schedules nothing. Existing GitHub consumers retain their
behavior.
- Add a concurrent idempotent partial index and lifecycle/producer
tests. Enable guarded disposable PostgreSQL URLs in affected test
harnesses.
- Reconstruct one hundred candidates per scope per scheduler pass.
Resume from the saved scope cursor and retain fair twenty-item execution
batches. Manual recovery starts cancellation before reading the full
backlog.
- Require the recovered browser reply to be saved before testing reload.
Keep all original assertions and time limits.
- Record the full producer audit, lifecycle limits, and failed attempts
in `doc/plans/2026-10-25-scheduled-retry-cancellation-sleep-audit.md`.

## Verification

Published head: `405e533394b26215e22d0452e9b0207d3f784a79`. Source
acceptance: `a35fa43b98e2bd378d4a920d2775ce243654838b`. The final commit
changes the audit only.

- All 363 backend cases in ten complete owner and consumer files pass
without skips. This includes actual Stop/retry producers, transaction
settlement, interrupted-write recovery, pause/resume, shutdown, fair
backlog processing and quiet after settlement. Seven separate fresh
PostgreSQL 17 databases prevent fixture interference.
- The two embedded-only backend fixtures temporarily use separate
external databases on this IPC-exhausted host. Their fixture imports and
native client teardown are restored byte for byte afterward. Assertions
and timing limits are unchanged. CI must still pass with the original
embedded fixtures.
- Two paging regressions fail on the prior worker and pass on the fix.
They cover cancellation before full reconstruction, a malformed first
page, fair batches, a newly committed intent behind the cursor, and no
later idle SQL. Per-candidate admission reads remain deliberate safety
checks.
- The repeated CI reload failure is reproduced with a temporary
twelve-second fixture settlement delay. The trace retains the same
five-second missing-reply assertion, even though a cleanup race masked
it in the top-level error. Requiring exactly one saved reply from the
resumed run passes under the identical delay. The fault is removed. All
six browser journeys pass on the final source in 40.5 seconds, with zero
retries and the original 120-second case and five-second reload limits.
- Browser acceptance uses the canonical CLI/server/static-UI path and a
fresh external database. Only fixture database-URI setup is temporarily
adapted and then restored. This is not an unmodified embedded
CI-environment reproduction. The six cases include the controlled case;
repeated runs are not added to the distinct count.
- Actual database build, server typecheck/build, module boundaries and
exact-current migration order pass. The database source tree is
unchanged from the verified 0405-to0406 upgrade: all 404 prior receipts
and 300 companies stay intact, exactly one receipt is added, replay adds
none, and the index is valid on upgraded and fresh databases. The five
snapshots remain 0402 through 0406.
- All earlier failures remain recorded in the audit. Prior head
`48b3fcb83f305616df02a4337a42ec0867bb4b80` had exact-head Greptile 5/5
but failed the repeated browser assertion. It was not retried blindly.
Its completed Ponytail review's backlog concern and old migration
paragraph are addressed here. Old scores do not satisfy new-head gates.
- Current-head CI passes. Exact-head Greptile and Ponytail both give
5/5, with no remaining actionable findings. These checks do not prove
deployed instance or database suspension.

## Risks

- Only supported in-process writers produce local transaction signals.
Independent SQL writers or other replicas need a separate ingress
contract. Startup reconstructs saved obligations.
- A real failure retains bounded retries. Unknown commit outcomes retain
the shared intent hold. Neither is discarded to report quiet.
- Per-owner drain uses a memory-only admission recheck. The shared
helper change affects existing consumers, which have focused regression
coverage.
- The partial index is concurrent and idempotent; it adds index storage.
Each scoped load reads at most one hundred rows. The shared helper
retains discovered pending IDs between passes, so a large unresolved
backlog still uses memory.
- Cloud alarms, idle-safety exemptions, and other reaper duties remain
separate. Merge requires passing current-head CI and review gates.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, shell tools, and local
PostgreSQL tests. The runtime does not expose a more precise model
identifier or context-window size for this turn.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-28 21:07:55 -05:00
DottaandPaperclip 7afee8f062 fix(server): schedule direct GitHub webhook recovery from saved deadlines (#17666)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/218/changes/paperclip/218
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - GitHub callbacks can fail before the app records an inbox row.
> - Direct GitHub integrations need bounded recovery from provider
delivery history.
> - The chat timer checks for due recovery every second, even without an
eligible integration.
> - Existing recovery checkpoints already store the next scan time and
runtime epoch.
> - This pull request schedules those saved obligations and wakes on
committed configuration changes.
> - It removes the final chat maintenance interval while preserving
authenticated recovery.

## Linked Issues or Issue Description

**What happened?**

The app queries due GitHub recovery endpoints every second. This still
runs when no direct GitHub integration needs recovery. Other chat
maintenance duties already have independent workers in the preceding
stack.

**What did you expect?**

Reconstruct existing recovery deadlines at startup and after committed
changes. Run only when an eligible endpoint reaches its saved deadline.
Make no recurring SQL or HTTP calls for unconfigured, disabled, or
Cloud-relayed integrations.

**Steps to reproduce**

Start an instance without an active direct GitHub integration. Leave it
idle. The chat maintenance interval continues to call
processFailedGitHubWebhookDeliveries each second.

Follows merged #17664. Related #15981 owns the original GitHub webhook
ingress/recovery separation. #17662 preserves review-check recovery,
which is a separate obligation. No duplicate scheduling migration was
found in the related-PR search.

## What Changed

- Put deadline reconstruction, scopes, and registration in the GitHub
provider owner. Read existing recovery checkpoints in pages of 100.
Reload current eligibility before each dispatch.
- Dispatch batches of five through the existing shared helper. Preserve
company fairness and the default limit of 25 for other consumers.
- Notify inside configuration, credential, checkpoint,
installation-lifecycle, and Cloud-registration transactions. A signed
installation deletion reproduced a missing wake before the fix.
- Detect credential-only epoch changes during a future backoff. Preserve
the existing floor reset without adopting old events into new
credentials.
- Gate every new recovery HTTP call on dispatch admission and shutdown.
Join in-flight work and retain its existing outcome/uncertainty
settlement. Other queues remain independent.
- Remove the final chat reconciliation interval and its unused
coordinator. Update the old coordinator fixtures; preserve the voice
retention worker acceptance.
- Restore known-unsent redelivery claims after drain/shutdown, guarded
by exact attempt identity. Preserve uncertain outcomes after transport
starts and never overwrite a newer receipt.
- Keep all existing redelivery, source, authority, lease, receipt, and
callback checks. Add no table, migration, or external wake contract.

## Verification

Current source: `ab00fc5b30d51d6c85891536599e7bdfd0c822fe`.

- **751 distinct cases pass** at
`3d7f163bc5259b60f9bd19b7fc90b402f0a6e925`: 274 complete GitHub review
cases, 294 other GitHub-named cases, 30 publication cases, 145
voice/retention cases, and eight startup cases.
- All 19 new recovery worker cases and all six stop-before-transport
variants pass. Coverage includes configured eligibility, callback-only
admission, committed configuration changes, outer transaction
settlement, restart/drain/standby, saved deadlines, fair batches,
independent queues, held HTTP, joined shutdown, known-unsent
restoration, and newer-receipt fencing.
- The first workflow filter omitted the separate recovery group. The
saved case list exposed the gap. The second selection ran the remaining
GitHub cases in a new database. Passed-name sets are disjoint. The two
commands filtered 1,504 and 1,484 unrelated cases respectively. No full
chat or repository-suite claim is made.
- Database build, server typecheck/build, module boundaries, and
migration order pass. Five fresh PostgreSQL fixtures receive the
unchanged parent migration history through 0403. This slice adds no
database migration or table.
- The parent browser-fixture repair is carried with both complete
patches preserved. At predecessor
`836acef0370d42323fdfdbd6d62a805b2469f1d4`, entire server, package and
UI source trees and owned hashes match the 751-case acceptance. The
current follow-up adds three test cases and audit evidence; production
source remains unchanged. The parent has merged.
- [The owning
audit](https://github.com/paperclipai/paperclip/blob/ab00fc5b30d51d6c85891536599e7bdfd0c822fe/doc/plans/2026-10-25-github-webhook-recovery-sleep-audit.md)
preserves earlier failures and exact acceptance scope. Fresh exact-head
Greptile and all CI gates remain required.

## Risks

- Direct GitHub endpoints still require the existing one-minute external
history cadence, with five-minute failure/claim backoff and provider
backoff up to one day. Cloud relay endpoints are excluded. This does not
promise network-idle direct integrations.
- The existing history, envelope, attempt, and lease limits remain.
Provider history never substitutes for a genuine authenticated callback.
- Supported producers share the current database owner's process-local
signals. Independent SQL writers and other server processes need their
own integration. Unknown transaction outcomes remain held by the
existing reconciliation protocol.
- Already-started HTTP keeps its existing timeout and is joined during
shutdown. No later request starts after drain or stop; durable attempt
uncertainty is preserved.
- Host-sleep eligibility and Cloud alarm coverage stay unchanged. Local
worker tests do not prove host/database suspension or fleet savings.
- Each remaining sleep slice needs its own current review and CI checks
before merge.

## Model Used

OpenAI Codex (GPT-6), with reasoning and code execution. The exact
serving model ID and context-window size were not exposed.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge


Parent startup-test correction: #17664 fixes its legacy coordinator
boundary marker. This slice removes that coordinator and timer entirely,
so its existing absence assertions supersede that obsolete inspection.
All other parent and upstream changes are preserved. At predecessor
`836acef0370d42323fdfdbd6d62a805b2469f1d4`, complete server, package and
UI trees match the 751-case acceptance; all eight startup cases also
pass after the explicit conflict resolution. Fresh review and CI are
required for this new head.


## Required review finding: orphan assignment investigation

The reported orphan endpoint cannot be committed through the existing
schema: assigned_agent_id is NOT NULL, its agent FK is ON DELETE
RESTRICT, and a validated nondeferrable composite FK enforces the same
company. A first reproduction failed at fixture mutation with PostgreSQL
23502 before reaching the worker; that failure remains recorded. Three
new real-PostgreSQL cases verify NULL/missing/deleted assignments are
rejected, then prove the preserved valid endpoint recovers once, saves
its next deadline, and makes no SQL reads during a 15-second
pre-deadline interval. All 22 recovery-scheduling cases pass (19
previous plus three new); unselected cases are not counted. The
preceding style-only commit preserved production behavior and
non-comment tokens, and the prior 751-case evidence retains its original
scope (754 distinct cases across both selections). A new review must
assess this evidence before merge; the old conditional verdict is not
waived. Actual parent squash ancestry is carried with whole-tree
identity before this test-only follow-up.


Repository style follow-up removes seven new code-comment lines from the
recovery ingress owner and constraint tests. Their explanations remain
in the audit. Both files retain identical non-comment TypeScript token
streams, preserving all guards, assertions and deadlines. Production
eligibility SQL is unchanged. Fresh current-head CI and reviews remain
required.


## CI test corrections

The original strict deletion assertion reproduced CI's PostgreSQL-18
failure locally: the forbidden delete reports 23001 (restrict
violation), versus 23503 on PostgreSQL 17. The corrected assertion
accepts only these integrity codes for deletion, retains exact codes for
NULL/missing assignments, and verifies the original agent and assignment
remain. All 22 recovery cases pass on embedded PostgreSQL 18; the same
three integrity probes pass on PostgreSQL 17.

A delayed real announcement response reproduced the attachment E2E's
filechooser timeout: the dismiss handler tried to click outside an
already-open modal menu. It now closes the menu, dismisses through the
UI, and restores that menu so the original action resumes. Controlled
late-announcement acceptance passes; the temporary fault is removed. All
11 complete attachment receipt journeys pass, retries zero and original
assertions/budgets unchanged, using a fresh supported external
PostgreSQL-17 database with canonical isolated
onboarding/server/UI/storage. An earlier embedded-cluster startup
failure occurred before tests and remains recorded. Production server
typecheck passes; production source and schema are unchanged. Fresh
current-head CI and review are required.

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-28 20:05:31 -05:00
scotttongandPaperclip 71f0c0c99e feat: add opt-in Coordinator workspace for chat, tasks, and decisions (#17983)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/147/changes/paperclip/147
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - People coordinate work through conversations, tasks, and requests
for input.
> - These surfaces must share task state and preserve the context of
each decision.
> - The existing workspace makes people switch surfaces to follow that
context.
> - This pull request adds an optional Coordinator workspace with linked
conversations, tasks, documents, and decisions.
> - Each person can enable it in Settings > Experimental and return to
the classic workspace.
> - The benefit is a coherent path from a request to an assigned task
and reviewed work.

## Linked Issues or Issue Description

**Subsystem affected**
UI, server, shared contracts, and database.

**Problem or motivation**
People need a consistent way to start tasks from agent conversations,
answer questions, review work, and return to the source context.
Decisions and task state must agree across these surfaces.

**Proposed solution**
Add a personal, default-off workspace experiment. Keep one conversation
per agent. Add task proposals, compact task and decision cards,
contextual document panels, and a Needs You queue with search, filters,
sorting, grouping, and history.

**Alternatives considered**
Replacing the classic workspace for everyone would remove the opt-out
path. Keeping separate decision state in each surface would create
conflicting answers. This change uses the existing canonical task and
interaction records instead.

**Roadmap alignment**
This supports the existing agent chat, task management, and human review
capabilities. It is an experimental presentation choice. The user
requested this isolated implementation after design review. No Discord
discussion is claimed.

## What Changed

- Add per-person workspace preferences, a default-off setting, and an
additive migration.
- Add Coordinator navigation, pinned destinations, task lists, agent
switching, and contextual panels.
- Link task suggestions and creation to the source conversation. Default
new task ownership to the current agent unless the user specifies
another owner.
- Share pending questions, decision receipts, exact review targets, and
history across tasks, chat, and Needs You.
- Preserve task access, assignment authorization, revision binding, and
required output review gates.
- Add compact document links, relative timestamps, composer controls,
and reduced-motion support for task and decision transitions.
- Add component stories, regression coverage, and capability-map
documentation.

## Verification

- Final head: `4b839aae1e314bd7e8635a766f1d205ff1c03ba6`, based on
master `8bc051245f77a47bee0f8ba45896b8bfa5922e0a`. Verified October 29,
2026 at 00:10 UTC: **MERGEABLE, 56 checks passed, four conditional
skips, no pending or failed checks**. [Current CI
run](https://github.com/paperclipai/paperclip/actions/runs/40790639688)
passed without a rerun on this head.
- Fresh Greptile **5/5**, zero new comments and zero open review
threads; Superagent passed with no suspicious changes.
[Checks](https://github.com/paperclipai/paperclip/pull/17983/checks).
- Local workspace typecheck/build passed after the latest rebase. The
final account-read patch passed UI typecheck/build and all 12 related
preference/settings tests, including a delayed real-client request
across account changes. Earlier scoped checks cover review
deduplication/replay, decision deep links, cross-surface state, access
boundaries, and migration replay.
- Local database/browser rechecks after the latest rebase were limited
by exhausted macOS shared-memory IDs: `initdb` failed before database
creation. The local run passed 31 UI/snapshot tests and skipped 24
database tests; those skips and the blocked local browser start are not
claimed as passes. The independent Linux CI database and browser checks
passed. No running dev database or host setting was changed.
- Upstream migration 0403 is preserved. Preferences and durable review
retry aliases are generated as replay-safe migrations
`0404_tense_silver_sable.sql` and `0405_harsh_avengers.sql`; five newest
snapshots are retained. Every detected conflict was rebased and pushed
before waiting for CI/review, as requested.
- The PR is unmerged. The active master ruleset still requires
code-owner approval for the changed Paperclip skill; no approval or rule
change was performed.

<details>
<summary>Earlier verification failures, integration history, and
evidence</summary>

These entries preserve prior checkpoints and failures; the current
acceptance result is above.

- Focused UI and server checks from the isolated build are recorded in
the implementation plan.
- Browser checks covered the opt-in shell, navigation, task/document
links, and decision card states. No new live provider trial is claimed
for this handoff.
- Current acceptance head: `4b839aae1e314bd7e8635a766f1d205ff1c03ba6`,
rebased onto master `8bc051245` immediately after its GitHub
review-repair migration took 0403. Preferences are generated as
idempotent `0404_tense_silver_sable.sql`, preserving upstream
SQL/journal/snapshot history and five newest snapshots. GitHub reports
MERGEABLE after the immediate lease-protected push. Scott's updated
instruction is to rebase and push every conflict resolution first,
without waiting for CI or Greptile; verification follows the push.
- The final reviewed feature tree was consolidated for repeatable
single-commit rebases. The complete previous commit history remains
reachable through local recovery ref
`codex/coordinator-recovery-before-rebase-20261028` (resolved snapshot
`0e1bbdf4e`). The actual rebase completed, and its tree hash exactly
matches that resolved snapshot. The force-with-lease required the known
remote head `0e6ef7c44`, protecting against concurrent branch changes.
No PR merge or permission/runner setting change occurred. Fresh
CI/review are in progress for the current head.
- `2001132fa` received Greptile 5/5 with one nonblocking account-switch
read finding. Current head detaches path-coalesced preference GETs and
disables HTTP caching, retaining React Query's account-scoped sharing. A
delayed real-client GET regression proves account B can load its saved
choice before account A responds, and A's late response only updates A's
cache. Preference/settings tests 12/12 and UI typecheck passed; its
review thread is resolved. Fresh current-head CI/reviews are pending.
The prior CI chat shard 3 ended with “The operation was canceled” and no
assertion failure ([job
123171595631](https://github.com/paperclipai/paperclip/actions/runs/40789688333/job/123171595631),
`/tmp/pr17983-2001132-chat3.log`); no code/timeout change is attributed
to that cancellation.
- `843e823b4` reached fresh Greptile 5/5 with zero comments/open threads
and Superagent pass. All browser tests including the repaired YAML shard
passed, and 54 checks passed. General server shard 9 ended with “The
operation was canceled” and no failed assertion; its test step was
marked cancelled (job
[123164350893](https://github.com/paperclipai/paperclip/actions/runs/40787501761/job/123164350893),
log `/tmp/pr17983-843e-server9.log`). A single unchanged-head rerun was
started after the workflow completed, but master moved while it ran. A
local nested-clone check timed out in its 30-second database-startup
hook and then failed cleanup before the 20 database cases ran; this is
retained as a local verification limit
(`/tmp/pr17983-843e-nested-clone-check.log`), not claimed as a pass or
proof of the CI cancellation cause.
- Following Scott's instruction, the new conflict was rebased and pushed
immediately without waiting for that rerun. Upstream's
`0403_natural_cerise.sql` is preserved; regenerated preferences and
retry-alias migrations are `0404_tense_silver_sable.sql` and
`0405_harsh_avengers.sql`, replay-safe with five newest snapshots
retained. The YAML helper conflict combines upstream's click and header
behavior with the editor-selection guard and injected regression.
Recovery ref `codex/coordinator-recovery-843e823b4` preserves pre-rebase
work. Current head is MERGEABLE. Full workspace typecheck/build passed;
UI and snapshot checks passed 31 tests, but 24 database tests were
skipped by the local support probe, and the local browser server could
not initialize PostgreSQL. A direct disposable `initdb` diagnostic
established the host limitation: `could not create shared memory
segment: No space left on device` (`shmget`, shared-memory IDs
exhausted, not disk space). No dev database or host setting was changed.
Diagnostics: `/tmp/pr17983-2001132-initdb-probe.log`,
`/tmp/pr17983-2001132-db-probe.log`; checks:
`/tmp/pr17983-2001132-tests.log`, `/tmp/pr17983-2001132-browser.log`,
`/tmp/pr17983-2001132-types.log`, `/tmp/pr17983-2001132-build.log`.
These local skipped/blocked checks are not claimed as passes; fresh CI
on independent runners is in progress.
- `d18f683cd` reached fresh Greptile 5/5 with zero comments/open threads
and Superagent pass, but [E2E shard
7](https://github.com/paperclipai/paperclip/actions/runs/40785966243/job/123159719925)
failed parsing an Advanced YAML clipboard read beginning with “Skip to
Main Content.” The log is retained at `/tmp/pr17983-d18f-e2e7.log`.
Current head hardens the test helper to verify editor focus and
selection, clear stale clipboard content, and require the YAML header at
the start of a fresh copy before parsing. Saved-state assertions and
timeouts are unchanged. All six Advanced YAML browser journeys passed on
a disposable local instance (41.0s); the exact lost-response journey
also passed with a one-time injected surrounding-page copy, verifying
rejection/reacquisition (17.6s). The precise browser focus/clipboard
timing in CI remains unproven; the observed invalid-read path is now
guarded and deterministically exercised. Logs:
`/tmp/pr17983-yaml-clipboard-scope-browser.log`,
`/tmp/pr17983-yaml-clipboard-injected-browser.log`. Fresh current-head
CI and reviews are pending.
- `19e6dcb0b` passed Superagent and Greptile 5/5, with one nonblocking
deep-link finding. Current head preserves attention links using
`?decisionId=`: the requested pending decision is rendered even beyond
the first 40 cards, focused and scrolled into view, then only that
parameter is consumed so later refreshes do not refocus. Other URL
parameters remain. Needs You tests 10/10 and UI typecheck passed; its
review thread is resolved. The preceding post-rebase regression run
passed 45/45 tests. Fresh current-head CI/reviews are pending.
- `6d772b7cc` reached Greptile 5/5 with zero comments/open threads and
Superagent pass. While 32 checks had passed, master moved and caused a
documentation conflict in `maps/feature-map/onboarding.md`. Rebased
immediately, preserving both onboarding paragraphs. The complete
four-commit branch was pushed as `19e6dcb0b` before waiting on
CI/review, per Scott's instruction. A transient Git index lock
interrupted the first continue; the command sequence briefly pushed
intermediate `34e298c07`, then the completed rebase was immediately
pushed. All feature and security/retry fixes are present; local recovery
ref `codex/coordinator-recovery-6d772b7cc` preserves the pre-rebase
history. The only tree differences from that ref are upstream's two
smoke-test files and the combined documentation paragraph. GitHub
reports MERGEABLE. Fresh current-head verification is in progress;
prior-head review results are not current acceptance.
- `21efa3120` passed Superagent but Greptile scored 4/5 for a valid
retry-key persistence bug: an acknowledged duplicate key could reopen a
resolved review. Current head adds an additive, replay-safe
`0404_light_swarm.sql` migration for indexed, task-scoped aliases from
acknowledged retry keys to the canonical interaction. Alias registration
and retry lookup occur under the existing task lock; payload/actor
mismatch still conflicts, and each canonical review permits at most 100
aliases. Original and acknowledged keys replay the terminal result
rather than creating a new gate. Five newest migration snapshots are
retained. Service/routes tests 165/165 passed; final quality review plus
migration replay/snapshot checks 25/25 passed; server typecheck passed.
The P1 thread is resolved in code; fresh current-head reviews and CI are
pending.
- `69c2c7543` passed 55 checks and Greptile 5/5 with no open Greptile
findings, but Superagent check
[123140675812](https://github.com/paperclipai/paperclip/pull/17983/checks?check_run_id=123140675812)
correctly flagged unbounded pending quality-card creation. Current head
fixes that under the existing task-row lock: equivalent requests with
fresh idempotency keys reuse the pending card; conflicting requests for
an unresolved deliverable return the existing interaction ID; pending
cards are capped at ten per task across all reviewers. Distinct outputs
remain independent, and already-answered items in a partially pending
batch can receive a fresh review. Added real-database concurrency,
cross-card duplicate, partial-answer, and hard-cap regressions. Quality
review 22/22 tests and final server typecheck passed; earlier
service/routes 163/163 tests passed before the final partial-answer
refinement. One added assertion initially expected a service HTTP error,
but duplicate keys are rejected earlier by the existing shared schema;
the assertion now verifies that validation. Fresh current-head
CI/reviews are pending; the action-required security result is not
treated as passed.
- `c9c575e5f` completed all 56 checks successfully with four conditional
skips, Greptile 5/5, and Superagent pass. Its two P2 review findings are
fixed in the current head: independently bound quality approvals now
each remain visible in attention; changing/clearing URL-backed
assignee/status filters updates the URL and survives task navigation.
Both review threads are resolved. Regression evidence: attention service
34/34 tests passed, CoordinatorTasks 20/20 passed, UI and server
typechecks and the full workspace build passed on `69c2c7543`. The first
new UI test run caught an assertion racing React Router's transition;
waiting for the navigation before asserting passes without weakening the
navigation/remount checks. These older-head green checks are not claimed
for the new fix commit.
- Preceding `0e6ef7c44` completed all 56 checks successfully with four
conditional skips, fresh Greptile 5/5 and no open findings, and passed
Superagent. A fifth migration-metadata collision arrived before the
final Runner job finished. Those green results are preserved as
prior-head evidence, not current acceptance.
- Previous fully verified migration head:
`0e6ef7c44696a377f35e69521b93587576374bd0`, integrating master
`f8226b051` after the fourth migration-number collision. Master added
terminal GitHub-response migration 0401 while the final native check
ran; upstream 0401 SQL/journal/snapshot is preserved unchanged, and
preferences are generated as idempotent `0402_yielding_blink.sql` on
top. Exactly the five newest snapshots remain. GitHub reports MERGEABLE
after the push. All 1,155 relevant
migration/review/interaction/native-execution/remote-assets tests,
workspace typecheck/build, migration guards and whitespace checks pass.
Fresh exact-head CI/Greptile/Superagent are pending.
- Immediately preceding head `36c67cf03` completed all 56 checks
successfully with four conditional skips, fresh Greptile 5/5 and no open
findings, plus passed Superagent security. No retry was needed for that
head's CI. Master advanced and introduced only a migration-metadata
conflict while its final native check ran, so that green result does not
establish acceptance of the current integration. Four consecutive
collisions (0398, 0399, 0400, 0401) during verification are retained as
concrete integration churn; a brief pause of competing migration merges
was requested, without assuming it happened or changing any repo
setting. The PR has not been merged.
- Prior fully verified head: `36c67cf03`, on the clean `30059c0ed`
integration of master `efd65c112`. The last Greptile P2 is fixed: Needs
attention retains the participant-agent scope through authoritative
server membership queries for each pending task, including historical
participation when another agent currently owns the task. It does not
approximate participation with current assignment or enumerate every
company task. The actual view-switch regression and all 31 focused
task/routing/collection tests, UI typecheck/build, token gates and
whitespace checks pass. Greptile completed a fresh 5/5 review on this
exact head (review 19) with zero new comments and no open review
threads. CI and Superagent remain in progress; no current-head CI
failure has been reported.
- Head `30059c0ed` received Greptile 5/5 with that one nonblocking
participant finding, now fixed. Superagent passed that head.
Current-base integration restored the ephemeral RunsOn fleet after a
superseded workflow retained queued aggregate jobs: normal cancellation
was insufficient; the single force-cancel request was interrupted but
readback confirmed that obsolete run cancelled and current CI began on
the trusted fleet. No cancellation retry or runner/security/workflow
changes were made. Its partial CI was superseded by the necessary
participant fix and is not current acceptance.
- Previous compatibility/base-sync head:
`30059c0ededc0eab4e04e8299a884f36db8b292f`, integrating master
`efd65c112` and the Inbox/workspace compatibility fixes. GitHub reports
MERGEABLE after the push. Coordinator keeps Inbox standalone under More
without rewriting the instance's Combined Inbox preference; opting out
restores that preference. Saved merged-Inbox URLs resolve to their
original owner, task status presets remain usable, and canonical
repeated `workspace` parameters retain scoped, deduplicated pagination
(including Needs attention). All 192 broader
routing/Inbox/sidebar/privacy/review tests and the final 16 task-page
tests pass, as do workspace typecheck/build, token gates and whitespace
checks. The two review threads are resolved. Fresh exact-head CI,
Greptile and Superagent results are pending.
- The preceding `d5b9be5bd` remained mergeable but its CI routing gate
intentionally fell back to GitHub-hosted runners: “stacked base merge
commit does not contain the current base branch.” All 45 downstream jobs
stayed queued. Current master was merged cleanly to refresh the pinned
base; no runner/security settings or workflow logic were changed.
Greptile scored that preceding head 4/5 with the two compatibility
findings fixed here. Its automatic Superagent scan was inconclusive at
checkout; the documented retry was still pending when superseded. Those
results do not establish acceptance of this current head.
- Previous approval/migration head:
`d5b9be5bd3b8d6b0437e42bf48138377f34fa67d`, integrating master
`ba5bba86d` and the stale-output approval correction. GitHub reports
MERGEABLE after the push. The fresh P1 finding is fixed: every submitted
item now validates and locks its bound output inside the resolution
transaction, whether or not it carries a required-quality-review
binding. Real database regressions verify that an advanced document
revision or deleted attachment refuses the entire batch without
recording approvals, and current ordinary output reviews still resolve.
All 272 combined migration/review/interaction tests pass; workspace
typecheck/build passed. Fresh exact-head Greptile and CI are pending.
The automatic Superagent scan ended inconclusive at checkout; one
documented on-demand retry is pending. These are explicit verification
limits, not passed security results. The P1 thread is resolved.
- Master consumed the next migration slot three times during this
verification pass: confirmation recovery took 0398, continuation
recovery took 0399, and GitHub acknowledgement recovery took 0400. Each
upstream SQL/journal/snapshot is preserved unchanged. Preferences are
now generated as idempotent `0401_white_lenny_balinger.sql` from
upstream 0400; exactly five snapshots remain, and replay coverage
locates this migration by table content. This is recorded concurrent
integration churn, not a claim that older green results apply to the
latest base.
- Head `ed3b68da9` fixed the two history/URL findings with 26 focused
regression tests, server/UI typechecks, workspace build and token gates
passing. Greptile then scored that head 4/5 with the stale-output P1
corrected in the current head. Its partial CI is superseded, not counted
as current acceptance.
- Previous filter-fix head: `ed3b68da9`, based on the `8458d39d9` merge
of master `063cfd438`. The two fresh Greptile findings are fixed:
history outcome filters now match recorded per-item verdicts in SQL
before pagination (mixed reviews remain in both applicable outcomes),
and same-page URL assignee changes/back/forward navigation update that
filter without clearing independent filters. All 26 focused
database/navigation/collection tests, server/UI typechecks, workspace
build, token gates and whitespace checks pass. The two review threads
are resolved. Fresh exact-head CI, Greptile and Superagent results are
pending.
- The `8458d39d9` migration integration also passed all 328 targeted
migration/interaction/confirmation tests, workspace typecheck/build and
Superagent security scan. Greptile scored that head 4/5 with the two
functional gaps fixed in the current head; those prior-head checks are
not current acceptance.
- Migration integration head:
`8458d39d9721f4cb312c2390070a0609f8cddd1a`, integrating master
`063cfd43813cabf18417605fb9eefb9aacf95c8d`. GitHub reports MERGEABLE
after the push. Master advanced twice during this conflict-resolution
pass: first its confirmation-recovery migration took 0398, then its
continuation-recovery migration took 0399. Both upstream migrations and
journal entries remain unchanged; Coordinator preferences are now
generated as idempotent `0400_sad_guardian.sql` from upstream's latest
snapshot. Exactly the five newest snapshots remain. The replay
regression now locates the table migration by content instead of
hardcoding a renumbered filename.
- All 328 targeted question/review/confirmation/migration tests passed
again after the second merge. Workspace typecheck/build and fresh
exact-head CI/reviews are in progress. The preceding `0c46f46d6` passed
workspace typecheck/build and Superagent security scan, but was
superseded because master consumed migration 0399 while those checks
ran. That prior-head result is not acceptance of the current head. No
production settings or runner/security permissions were changed, and the
PR has not been merged.
- Previous integration head: `0c46f46d6f2b23417ab872ce3cb6ff2673647287`,
integrating master `287b04d72f1b9fca1412e05435c75b8302ba0710`. GitHub
reports MERGEABLE after the push. The renewed conflicts were
`0398_snapshot.json`, `_journal.json`, and the top imports in
`issue-thread-interactions.ts`. Upstream's `0398` confirmation-recovery
index and journal history are preserved unchanged; Coordinator
preferences were regenerated as idempotent `0399_bouncy_miek.sql`, with
replay coverage updated and exactly the five newest snapshots retained.
Both terminal confirmation notifications and Coordinator task
assignment/required review behavior are preserved.
- All 328 targeted interaction/review/confirmation/migration tests pass,
as do workspace typecheck, map validation and whitespace checks. The
workspace build and fresh exact-head CI/Greptile/Superagent checks are
pending. The first migration-generation attempt hit the sandbox's local
IPC restriction before generating files; the unchanged authorized local
generation completed successfully. Prior-head green checks below do not
establish acceptance of this merge.
- Previous acceptance head: `8b7dcf739ed15afc51351fdfa0e0e5fbc75ab788`,
with master `1aa3a21ac` integrated and GitHub reporting MERGEABLE.
Greptile completed a fresh 5/5 review on this exact head with zero new
actionable findings and no open review threads. The [fresh CI
workflow](https://github.com/paperclipai/paperclip/actions/runs/40752864319)
completed SUCCESS on attempt 2 at 19:40:08 UTC, including all eight E2E
shards. Final completed check set: 55 succeeded, four conditional checks
skipped, zero pending/queued/running checks, and one
neutral/inconclusive Superagent scan. The auxiliary commitperclip review
and isolated native Runner compilation/cache-reuse check both passed.
This is not a claim that Superagent produced a passed security verdict.
GitHub still reports MERGEABLE against current master
`60b8089a44b4eaa37e627adbfdf2f130bda13335`.
- Current-head E2E: all eight shards and the aggregate passed, including
the previously failing YAML browser journey. Serialized server shard 9/9
failed: the protected YAML projection test exceeded its original
15-second timeout; its late update request then reached the next test's
reset mock (the captured payload is the prior test's model/label
update). All 88 tests in that exact unchanged file passed locally in
38.03 seconds, with no timeout or assertion changes. The original
slow-request cause remains unproven. CI failure log:
`/tmp/pr17983-8b7-serialized9.log`; local recovery:
`/tmp/pr17983-adapter-yaml-repro.log`. The single bounded unchanged
shard rerun passed, and the workflow completed SUCCESS. Rerun log:
`/tmp/pr17983-8b7-serialized9-rerun.log`. The initial failure is
retained; a passing retry does not establish its original slow-request
cause.
- Greptile scored preceding head `4873704be` 5/5 with one valid P2:
opened task decision records missed company-scoped live invalidation.
The current head uses the existing company decision prefix for
resolution and effect-completion events, and resets private record
payloads on access changes. Its thread is resolved. All 107 focused
record/live-update tests, UI typecheck/build, token checks and
whitespace checks pass.
- CI on `4873704be` failed E2E shard 7/8 in the Advanced YAML
lost-creation-response journey: its clipboard helper selected page text
starting with “Skip to Main Content” instead of YAML. The exact
unchanged journey passed in a disposable local browser instance (1 test,
17.1 seconds). No assertion, timeout or production behavior was
weakened; the original failure cause remains unproven. Failure log:
`/tmp/pr17983-487-e2e7.log`; local check:
`/tmp/pr17983-agent-yaml-repro.log`. The full unchanged Advanced YAML
browser suite also passed locally (6 tests, 37.8 seconds). Fresh
current-head CI subsequently passed this journey and all other E2E
shards.
- Both the automatic and one supported on-demand Superagent scan on
`4873704be` ended neutral/inconclusive: “Pinned PR scan merge-base
checkout failed or timed out.” These do not count as a passed security
verdict. The current head's automatic scan and one documented on-demand
retry also returned the identical neutral checkout failure, with zero
annotations or further diagnostics. This is an external scanner blocker,
not a passed security verdict. No security settings or permissions were
changed.
- Recorded decision links now render and focus the full source-task
record in both Classic and Coordinator, including recorded choice,
submitted inputs, and the existing effect-result resolver. Fresh
terminal records take precedence over older open-decision cache entries.
Context and account checks keep mismatched or inaccessible records out
of the DOM; no decision-history tab was added to tasks or chat. The
shared company live-run feed now drives live-only filtering, including
ended runs and terminal tasks with stale run entries. All 213 focused
tests, UI typecheck/build, token and whitespace checks pass; the final
focus follow-up passed all 188 task-detail tests and UI typecheck. The
first new navigation test failed because its test host omitted company
context; the host was corrected before the passing run.
- Previous integration head: `375c5e89516705050d94bab99336212841b2e6e1`
merges master `1aa3a21ac` after four additional upstream commits. The
sole conflict was competing imports in `server/src/services/issues.ts`;
both quality-review policy and inbound wake-notice notifications are
preserved. The PR-specific review import now sits beside
execution-policy imports instead of the frequently changing first line.
GitHub mergeability is rechecked after the push.
- On the combined master tree, workspace typecheck/build, all 153
affected UI tests, map validation, and whitespace checks pass. Four
server suites passed 77 tests; the fifth suite's module-import hook
timed out while broad verification was running. Its unchanged isolated
run passed all 41 tests in 7.2 seconds with the original timeout. This
records recovery without claiming the original import-timeout cause is
proven. CI on `375c5e895` passed every substantive job, including all
eight E2E shards and Superagent; Greptile found the two functional gaps
fixed in the current head. A short-lived `669d90876` commit added the
main fixes before the focused navigation follow-up.
- Immediately preceding head `9d9737b49` completed all 56 checks
successfully with four conditional skips, Greptile 5/5 and no open
findings, plus a successful Superagent scan. The signoff E2E shard
passed on its single accepted rerun; its initial cancellation/timing
failure is retained below. Master moved again while those checks ran,
requiring this final integration rather than treating the prior head's
green result as current acceptance.
- Previous head `9d9737b496911a6054d0ea22d1b42b28b115e9ab` includes
master `d30c8f42b842327ee1c18c41a2efd6ba623da5cd`; that head was
subsequently conflicted by moving master. The master merge preserved
durable account-bound writes and Coordinator UX. Workspace
typecheck/build, 416 focused UI tests, and 142 affected comment-route
tests passed. A stable full UI run on preceding head `938ad1665` passed
all 9,833 tests across 836 files; its final full workspace build also
passed.
- Greptile found nested proposal project inheritance and Classic
bound-revision links on `91be74952`. Both were fixed with 142
interaction-route tests, 113 focused UI tests, and UI/server typechecks.
Its next review identified a valid draft-preservation bug in the new
Classic loading UI. Head `9d9737b49` keeps loading/error notices outside
editors and annotations while preserving dirty drafts; 115 focused
review UI tests pass, including pending/failed revision loads and
continued draft editing. All related threads are resolved. Greptile
completed a fresh 5/5 review of
`9d9737b496911a6054d0ea22d1b42b28b115e9ab` with no open findings.
- CI on `938ad1665` exposed an integration regression with the newly
merged durable startup saves: the personal preference gate blocked the
task page before its first session lookup. The guarded title editor now
mounts while that lookup is pending, with presentation-specific tools
still gated. All 216 affected component tests pass. The unchanged
five-test `disconnect-write-recovery.spec.ts` browser suite passes
against a newly launched disposable local-trusted PostgreSQL instance on
port 33219, including the exact failed startup-save journey. No live
provider, hosted authentication or production proof is claimed. The
helper-owned test server exited and the port has no listener. UI
typecheck, built-browser assets, token and whitespace checks pass.
- Initial durable-write merge tests found duplicate imports and unscoped
draft fixtures, fixed before 416 focused tests passed. A sandbox
typecheck could not create its IPC socket; the supported rerun passed.
The first revision-link test used a wrong Return to latest button
assertion, corrected before the 113-test pass. The startup E2E
reproduction initially still failed because an outer shell gate also
blocked the page; the subsequent fix passed all five cases without
changing the test or its timeouts. A focused loading-header assertion
initially used an incorrect fixture title; correcting it preceded the
216-test pass. These failures remain recorded.
- Earlier routing gates fell back to GitHub-hosted runners while master
was moving or conflicted. Superseded queued runs were cancelled, then
the `938ad1665` routing gate explicitly selected the ephemeral RunsOn
fleet. Its CI actively executed and completed most tests; only the
diagnosed startup E2E shard and aggregate failed, alongside the valid
Greptile finding. Auxiliary GitHub-hosted workflows also completed
successfully on earlier heads, so queueing alone is not an
administrative blocker. Fresh [CI on
`9d9737b49`](https://github.com/paperclipai/paperclip/actions/runs/40744012678)
is the acceptance target; the previously failing startup E2E shard now
passes. A different signoff E2E shard failed during executor
resubmission when its fixture run was cancelled as
`issue_continuation_waiting_on_review`. The exact unchanged journey
passed locally (1 test, 46 seconds), and the preceding head with
identical server/signoff code passed that CI shard. This supports a
bounded rerun but does not establish the timing failure's root cause.
After the workflow finished, GitHub accepted one rerun of that failed
shard and its dependent aggregate; both passed, completing all checks on
that head. The failure log is retained at `/tmp/pr17983-9d9737-e2e7.log`
and the local reproduction at `/tmp/pr17983-signoff-repro.log`. No
assertion or timeout was weakened.
- On the first merge, full workspace typecheck/build, all 9,622 UI
tests, 267 tests across seven affected server suites, two migration
checks, map validation, token gates, and the PR diff whitespace check
passed. Greptile then found duplicate local task-search filtering and
lost completed item-review detail. Both are fixed, with 42 passing
focused UI tests and passing UI typecheck/build.
- A subsequent Greptile review found attachment confirmations without
working links and mobile history without a visible host. Confirmation
layouts now derive the authenticated immutable-content endpoint from the
attachment ID, and Needs You uses the existing full-screen mobile sheet.
All 119 focused tests pass, including missing/stale display URLs, both
review layouts, and both mobile history entry buttons. UI
typecheck/build and token checks pass. Full workspace typecheck/build
also pass after the second master merge.
- Greptile gave head 22f69c304 a 5/5 score with one non-blocking
desktop-history reopening finding. Head 6dd52b6d3 fixed it, passed all
nine history tests, UI typecheck/build, token gates, and the full
9,679-test UI suite, then received a fresh 5/5 review with zero open
findings. These are prior-head results; review on the master-sync commit
is pending.
- The chat and workspace CI jobs on head 22f69c304 were interrupted by
runner shutdown signals and cancellation before completing their tests.
Their logs do not report failing assertions. Those interrupted jobs are
not claimed as passes. The new head starts fresh runs.
- The first merge CI had a Slack session-sync idle assertion fail after
an unexpected database read. Its exact isolated reproduction passes, and
the chat CI shard passed on head 618c5a2a3. The original failure's cause
remains undetermined. The broader local reproduction, run concurrently
with full verification, instead encountered 21 timeout failures across
its two test chunks; it is not claimed as a passing full local server
run. A concurrent local UI run had eight failures (seven timeouts and
one delayed autosave assertion). The complete UI run on the final head
passed all 9,679 tests across 830 files with two workers; no test
timeout or assertion was weakened. This establishes recovery without
claiming that every earlier timeout's cause has been proved. An earlier
intermediate UI run also overlapped the second master merge and failed
the newly added Advanced-sidebar expectation, so it is not treated as
stable-tree evidence. The newly merged UI dependencies initially
required refreshing the local install from the upstream package
manifest; the generated local lockfile update is not committed, per
repository policy.
- Superagent returned neutral/inconclusive scans on the preceding heads
because its pinned merge-base checkout failed or timed out. The
available retry endpoint returned 404. These are not successful security
verdicts. The fresh scan on `91be74952` passed (PR scan passed; no
suspicious PR changes detected). The `938ad1665` scan again returned
neutral/inconclusive with the same pinned merge-base checkout error; the
check-suite rerun endpoint returned 404. The fresh `9d9737b49` scan
completed successfully at 18:22 UTC with no suspicious changes detected.
Earlier neutral scans are not counted as successful security verdicts.
- Prior head `57902152ac3218096fca669d33ff18400a2a86ae` passed 9,618 UI
tests across 826 files, received Greptile 5/5 with no open findings, and
completed CI with 56 passes and four conditional skips. These are
historical results, not acceptance of the latest merge commit.
- The first full build found generated capability-contract drift. The
generated outputs were refreshed. Initial sandbox runs could not open
local IPC sockets; verification was rerun with local test access.
- Current master was merged. The workspace preference migration was
regenerated after the existing migration history.
- The UI run first found two outdated expectations: early custom-answer
validation and the document access error copy. Both were corrected, and
the full UI suite then passed.
- The local server run found three failures in unchanged tests. The Muse
test passes with Python 3.13 instead of the host's Python 3.9. The two
workspace tests pass when their test process uses the expected master
default branch. These environment settings do not change application
behavior or global machine settings. The unsharded server run was
stopped after those reproductions; CI supplies the full sharded server
result. No successful full local server run is claimed.
- Skill inventory generation needs an external eval checkout, which is
absent locally. The existing generator functions refreshed only the live
skill inventory and its derived files. The checked-in eval inventory was
preserved. The inventory validation gate passes.
- Greptile found a dropped MCP review requirement, missing per-item
output links, generic item-review summaries, and a history-refresh
failure. The fixes have 32 passing database-backed server tests and
focused rendered-card tests. A follow-up partial-review finding was
corrected by forwarding the canonical mutation status before settling
the card. Attachments open through the authenticated immutable-content
route in both card layouts. The final focused UI set has 117 passing
tests, including these regressions.
- Both browser shards that first failed expected a disabled-chat
message. The copy was restored, and those shards passed in CI on the
next commit. The two journeys also passed locally. One local attempt
first timed out before feature disable while waiting for the provider's
initial message; its isolated reproduction passed. That earlier timing
failure remains recorded and is not presented as an explained
infrastructure failure.
- Serialized server shard 9 first failed during pnpm setup with
ECONNRESET, before dependencies or tests ran. Its single rerun passed
setup and all tests. The build and production runtime boot passed on the
first attempt, but that run's public-install step timed out during Pi
setup. The single build-job rerun passed compilation, runtime boot, and
clean public-install verification. Those setup scripts are unchanged by
this PR. The successful retry establishes recovery; the earlier Pi
timeout's underlying cause remains undetermined. The aggregate CI gate
is green: [workflow
run](https://github.com/paperclipai/paperclip/actions/runs/40637789695).

</details>

## Risks

- This touches shared task, interaction, and completion paths.
Regression tests must cover classic and experimental behavior,
authorization, duplicate answers, and stale review targets.
- The additive preference table must migrate before the setting is used.
The setting defaults off.
- The experiment changes navigation and message presentation. Canonical
task and document records remain the source of truth.
- The initial task brief and saved plan can repeat information. This
change fixes chronology; a broader redundancy policy remains a design
decision.

## Model Used

OpenAI GPT-6 Codex with reasoning and tool-assisted code editing, tests,
and browser verification. Earlier iterations used Codex models in this
task; their exact model IDs are not available in the current context.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used
- [x] I have checked ROADMAP.md
- [x] I have searched GitHub for duplicate or related PRs
- [x] I have described the issue in-PR following the relevant issue
template
- [x] I have not referenced internal/instance-local Paperclip issues or
links
- [x] My branch name describes the change
- [x] I have run relevant tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation
- [x] I have documented risks
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open recommendations or follow-ups
- [x] I will address review comments before requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-28 17:20:01 -07:00
Nicky LeachandPaperclip c57af3c564 Reuse prepared Runner storage and installed skill selections (#18089)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/207/changes/paperclip/207
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip manages AI agents and their work.
> - The native Runner prepares selected skills, instructions, and
provider storage.
> - Repeated preparation imports the company skill inventory and
rebuilds Claude storage.
> - Execution environments can already maintain prepared resources.
> - This pull request lets them reuse account storage while Core keeps
execution policy.
> - New retry runs resolve current skills and keep the failed attempt's
history.

## Linked Issues or Issue Description

**What existing behavior does this improve?**

Native Runner preparation and retry skill selection.

**Current behavior**

Explicit installed selections still trigger company inventory
reconciliation. Plugin preparation receives account identity only on
warm transitions. Claude's isolated mode requires a session-specific
configuration directory.

**Proposed behavior**

Skip inventory imports when explicit selections are installed, while
retaining current authorization and version resolution. Send account
identity on initial preparation. Allow an execution environment to
provide persistent Claude storage without enabling preconfigured
permission behavior. A new retry resolves current skill assignments.

**Reason and benefit**

Remove repeated preparation work without adding environment-specific
policy to Core. Related: #13984 describes a similar storage-lifetime
problem in the separate claude_local adapter; this PR does not change
that adapter.

## What Changed

- Derive Claude’s configuration path from the single authoritative
prepared-storage input; separately supplied CLAUDE_CONFIG_DIR values are
overridden.
- Add an explicit prepared Claude storage binding, forward it to the
sidecar, and retain recovery and provider lifetime fencing.
- Refresh Core-owned Claude settings after acquiring the lifetime lease.
Reuse environment-prepared skills.
- Reuse installed explicit skill selections and preserve
missing-selection initialization and current access checks.
- Reserve the prepared-home marker for environment provisioning; task
overrides are rejected and configured bindings are stripped before
native launch.
- Clear inherited skill selection snapshots on new retries. Keep
admitted execution recovery and failed attempt metadata.

## Verification

- Current single-input follow-up `8dbc2f6ec`: 154 focused Runner checks
pass with one existing skip; four Grok identity checks and four Pi
packaged-probe checks pass. Shared immutable source identities advance
to Grok10/Pi32/Copilot74. All56 current-head CI checks pass (four
intentionally skipped); standard and enhanced reviews are both5/5 with
no unresolved threads.
- Focused Runner sandbox tests: 29 passed. Focused environment tests: 16
passed.
- company-skills-empty-runtime: 10 passed.
- Plugin Runner and runtime selection database tests were attempted.
Local execution is blocked because embedded PostgreSQL cannot load
libzstd.1.dylib; these checks remain for CI.
- New database regressions cover installed-selection reuse, initial
account preparation, and retry snapshot removal.
- Prepared-home trust-boundary regressions: 4 targeted checks passed
(task schema, all env binding scopes, native executor).
- Focused Pi public-install probe checks: 4 passed. The build smoke
probe now asserts the current Pi 32 profile and exact digest.
- CI found and fixed retry-context TypeScript inference, stale Pi
identity fixtures, Docker source identity inputs, and the
skill-observability test’s old assumption that every selection imports
inventory. Cold and reused selection coverage remain.
- CI chat shard 2 initially failed three GitHub/Discord idle-database
assertions. An unchanged-head rerun passed; the original cause remains
unexplained.
- Runtime head `f5b53679a` passes all 56 current CI checks (four jobs
intentionally skipped), including the full build/public-install probe,
TypeScript, Rust, Runner and server matrices. Greptile is 5/5 with no
unresolved review threads.
- The requested enhanced review scored 5/5 on `f5b53679a`, with one
nonblocking documentation request. Documentation follow-up `1ac5d26a8`
adds only the documented existing ownership/0700 requirement; the thread
is resolved and all 56 current-head checks pass (four intentionally
skipped). The subsequent single-input runtime follow-up8dbc2f6ec
repeated the complete CI → standard5/5 → enhanced5/5 cycle successfully.
- Broader verification is delegated to GitHub CI as requested. The
initial policy check rejected a generated lockfile repair; that change
was removed because Core CI already resolves stale importer entries.

## Risks

Prepared storage must be provisioned by the execution environment before
launch. It is not credential isolation. Core replaces managed Claude
settings under the existing provider lease. No new per-run harness homes
are created by this option. New retries may select a newer skill
version; recovery of an already admitted provider execution keeps its
saved input.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning and tool use. The exact model
revision is not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
related context above
- [x] I have described the issue in-PR following the relevant issue
template
- [x] I have not referenced internal/instance-local Paperclip issues or
links
- [x] My branch name describes the change
- [x] I have run focused local tests; database and full verification
remain for CI as explained above
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation
- [x] I have considered and documented risks
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-28 17:09:24 -07:00
DottaandPaperclip 8bc051245f fix(server): wake stale GitHub review repair from committed changes (#17664)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/215/changes/paperclip/215
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - GitHub checks and task admission can finish in either order.
> - A check can reject an old head before admission creates its review
row.
> - The chat maintenance loop repeatedly scans for that late review.
> - Existing cancellation and delivery receipts already identify the
repair.
> - This pull request wakes repair from committed changes and leaves
settled history quiet.

## Linked Issues or Issue Description

**What happened?**

GitHub chat maintenance repeatedly scans all review projections. Empty
instances and retained history incur database work even when no repair
is owed.

**What did you expect?**

A committed stale-head cancellation or admitted review should wake
repair. Only the exact delivery's unassessed queued/running review
should become superseded. When no repair remains, this duty should stop
making database calls.

**Steps to reproduce**

Configure a GitHub chat endpoint and leave it idle after all reviews
settle. The previous maintenance callback continues to call
repairSupersededReviews. A rapid push can also cancel a check before
admission inserts its review, which explains why recovery must remain.

Refs #17662, the merged review-check publication parent. Related #17661
and #17656 migrate terminal responses and acknowledgements. This slice
owns only late stale-head projection repair.

## What Changed

- Move the repair predicate and execution into the GitHub provider
owner. Match the original admitted delivery and cancellation receipt.
Recheck state and assessment in the update.
- Register a scoped worker with the existing coordinator. Use keyset
pages and fair bounded dispatch. Keep retries only for unresolved repair
or failed reconstruction.
- Signal before cancellation, automatic receipt insertion,
automatic-review binding, and check-driven review-state writes. Preserve
existing transaction ownership and outer commit behavior.
- Remove the periodic provider wrapper and publication-maintenance
callback. Preserve explicit manual recovery and independent
missed-webhook recovery.
- Add two concurrent, idempotent partial indexes. Use a guarded delivery
UUID lookup and a bounded exact-receipt lookup. Add no tables.
- Add ten real-database lifecycle and producer cases. Document the
producer audit, failure history, and remaining limits.

- Keep YAML browser reads scoped to the editor after focus changes, with
the original journey assertions and deadlines.

## Verification

Current source: `0886a0229b1c4f68d2f582da86aa1f248e9124f3`.

- At `dd6bca0485c3444d6e3d0ee10ec4aa651e801392`, **287 distinct cases
pass**: 274 complete GitHub workflow cases and 13 startup cases. The
GitHub command filters out 1,485 unrelated cases. The workflow suite
uses a new, pre-migrated PostgreSQL database.
- Coverage includes both orders of cancellation and admission, outer
commit and rollback, restart, drain, standby, failed-update retry,
concurrent assessment under an observed row lock, shutdown during that
wait, more than one candidate page, manual history, and settled-history
quiet.
- Database build, server typecheck/build, module boundaries, and target
migration order pass.
- Canonical migration `0403_natural_cerise.sql` preserves both original
index definitions and concurrent idempotent creation. All 401 parent
migration receipts remain unchanged during upgrade. One new receipt is
added. Replay adds none. Both indexes are ready and valid on fresh and
upgraded databases. The five newest snapshots remain.
- The normal parent merge preserved the prepared tree. The later browser
fixture repair changes only its central read helper and verification
note. Entire server, package, and UI trees remain identical to the
accepted source.
- [The owning
audit](https://github.com/paperclipai/paperclip/blob/0886a0229b1c4f68d2f582da86aa1f248e9124f3/doc/plans/2026-10-25-github-review-projection-sleep-audit.md)
records the exact evidence and earlier failures. Earlier query-plan
measurements retain their historical revision scope.
- Fresh current-head CI and Greptile review remain required. No deployed
sleep, full repository-suite, or fleet-savings claim is made.

Failure accounting: browser shard 7 failed twice on
`1453a4447c0d4d33f713ae3e00734c7950f95426` because the YAML helper read
whole-page clipboard text while main was focused. Three isolated
unchanged local passes did not resolve that failure. A controlled native
focus-loss probe reproduced the same error before the repair and passed
after it. The helper now clears stale clipboard data, focuses the
editor, and waits within the existing expectation budget for a fresh
YAML copy. All six complete YAML journeys pass with zero retries in 50.9
seconds. Journey assertions and deadlines are unchanged. The temporary
fault is removed. The exact CI focus-change trigger remains unknown.
[Both CI
attempts](https://github.com/paperclipai/paperclip/actions/runs/40777754306)
remain part of the verification record. Fresh new-head checks are
required.

Ponytail follow-up: the 4/5 review of `b3c81ba` was conditional on
fixing a stale startup-test slice marker, so the merge was held.
Boundary assertions reproduced the invalid -1 end index. The test now
uses the existing timer declaration and checks both bounds; all 13
startup/hostname cases pass. The optional no-op coordinator cleanup is
already in #17666. The six YAML journeys and all production code remain
unchanged. Fresh review and CI are required for this corrected head.

## Risks

- Missing a future producer signal could delay discovery until restart.
Supported writers share the current database owner's process-local
notification scope. Independent SQL writers and other server processes
need their own integration.
- The migration builds indexes concurrently. The existing migration
runner handles interruption and invalid index recovery.
- Direct GitHub missed-webhook discovery remains periodic. This change
does not make the whole chat service idle.
- Existing Cloud wake coverage and sleep blockers remain unchanged.
These tests do not prove deployed host or database suspension.
- Each remaining sleep slice needs its own review and CI checks before
merge.

## Model Used

OpenAI Codex (GPT-6), with reasoning and code execution. The exact
serving model ID and context-window size were not exposed.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-28 18:42:54 -05:00
DottaandPaperclip 65fa1cd617 fix(server): schedule GitHub review checks from committed changes (#17662)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/213/changes/paperclip/213
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - GitHub review checks report the state of admitted agent work.
> - The chat maintenance loop searches for check work even when none
remains.
> - Existing action rows already record unfinished publication and retry
deadlines.
> - Committed changes can wake those rows through the shared
coordinator.
> - An unresolved check must still detect a remote head change when a
webhook is missed.
> - This pull request schedules only outstanding checks and leaves
settled history quiet.

## Linked Issues or Issue Description

**What happened?**

The GitHub chat maintenance callback repeatedly queries review-check
actions. Empty queues and completed history still incur database reads.
Local state changes wait for the maintenance callback.

**Expected behavior**

Committed check creation, review binding, run changes, and
publication-lease release wake the worker. Existing retry and
remote-head deadlines apply only to unfinished checks. A settled worker
makes no recurring database or provider calls.

**Steps to reproduce**

Configure a GitHub bot with no outstanding checks, or finish all of its
checks. Leave the instance idle. The old maintenance callback continues
to call the check service.

Refs #17661, the merged terminal-response parent. Related #17656
migrates response acknowledgements. Related #16385 changes branch-policy
admission; this PR preserves that separate policy boundary. Late
stale-head projection repair remains a separate follow-up slice.

## What Changed

- Move the existing check-state reader into the GitHub provider owner.
Preserve current authority, run selection, assessment ownership, and
check replacement behavior.
- Register a scoped worker with the existing coordinator and scheduler.
Existing received and retryable-failed actions remain durable truth. No
new table is added.
- Signal check enqueue, task review receipts, manual review
insertion/binding, run lifecycle changes, and publication-lease release
through existing transaction ownership.
- Preserve the saved failure backoff, eight-attempt policy, and
competing lease expiry. Keep five-second remote-head reconciliation only
while a received check remains unresolved.
- Check admission before each HTTP request. Shutdown leaves durable work
recoverable without spending a provider failure attempt.
- Remove check dispatch from the periodic GitHub callback. Keep the
separate late-projection repair and the manual combined recovery method
compatible.
- Add an idempotent concurrent partial index for unfinished check
selection. Retain the newest five generated snapshots.
- Add eleven real-database worker cases and startup wiring coverage.
Document producer coverage and the external reconciliation limit.

## Verification

Current reviewed source: `2bba08403b195bf646eda48992b46d6f5cebf756`.

- Normal merges preserve the complete review-check patch, the landed
terminal-response parent, and current master changes. No landed SQL
migration or journal entry changes.
- At `6995f84b240a14a7b8660e1cf095b3aa1e1e3168`, **331 distinct tests
pass**: 264 complete GitHub workflow cases, 30 completion cases, eight
issue-tree producer cases, 16 login-cleanup cases, and 13 startup cases.
The GitHub command filters out 1,485 unrelated cases. Login cleanup uses
its real embedded PostgreSQL fixture.
- Combined-master acceptance: **277 distinct tests pass** at
`9c538aed1251fd7f7cecb829a0ecbce6110fb1ed`: 264 complete GitHub workflow
cases and 13 startup cases. The GitHub command filters out 1,485
unrelated cases. A new PostgreSQL database receives all migrations
through 0402..
- Migration `0402_ancient_malice.sql` preserves the original partial
index definition and concurrent idempotent creation. All 400 prior
migration receipts stay unchanged during upgrade. One new receipt is
added. Replay adds no receipt. The index is ready and valid on fresh and
upgraded PostgreSQL databases. The five newest snapshots are retained.
- A rollback-only query probe adds 10,000 processed actions and one
pending action. The actual parameterized candidate predicate selects the
one pending row through the partial index, with two shared buffers and
0.007 ms execution time. This measures candidate discovery, not all
lease or provenance reads.
- Database build, server typecheck and build, module boundaries,
migration safety and migration order pass. Audit: [GitHub review-check
scheduling](https://github.com/paperclipai/paperclip/blob/2bba08403b195bf646eda48992b46d6f5cebf756/doc/plans/2026-10-25-github-review-check-sleep-audit.md).
- Fresh checks and Greptile review are required for this head. Prior
scores do not count. These checks do not prove deployed host suspension
or fleet savings.

## Risks

- Unresolved queued/running checks still make remote-head requests at
the existing five-second deadline. GitHub webhook receipt does not prove
future pushes cannot be missed. This PR does not claim active reviews
become network-idle.
- Run and configuration hints rebuild outstanding checks for the
affected company. Enqueue, review, and lease hints narrow to the
affected endpoint/repository/PR. Startup and scope reconstruction read
existing pending rows; they are not constant-cost operations.
- Delivery admission failures remain discoverable through the unresolved
check's external reconciliation deadline. Not every shared delivery
mutation gains a new immediate signal.
- Notifications use the existing process-local database ownership
contract. Independent SQL writers and other replicas need their own
supported integration.
- Provider markers, publication leases, and saved actions preserve
recovery after uncertainty. This change does not expand Cloud alarm
coverage or prove deployed host/database suspension.
- Each remaining sleep slice needs its own review and CI checks before
merge.

## Model Used

OpenAI Codex (GPT-6), with reasoning and code execution. The exact
serving model ID and context-window size were not exposed.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-28 17:08:27 -05:00
DottaandPaperclip f8226b0515 fix(server): wake GitHub terminal responses from committed changes (#17661)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/210/changes/paperclip/210
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip coordinates agent work and presents results in chat.
> - GitHub acknowledgements already persist the response action and
provider receipt.
> - A terminal run can still owe a final response after acknowledgement.
> - Periodic maintenance searches those rows even when no relevant state
changed.
> - Committed run, issue, presentation, lease and publication changes
identify when recovery can advance.
> - The owner should recover from those events and real deadlines, then
become quiet.

## Linked Issues or Issue Description

Refs #17656, which is merged. This existing terminal-response slice
targets master.

**Problem:** A saved GitHub response can remain nonfinal while its run,
native presentation, publication or source is unresolved. Removing
maintenance without covering those producers loses recovery. Polling
settled history keeps the tenant active.

**Expected behavior:** Committed supported changes wake the terminal
owner. It reconstructs existing actions, preserves provider authority
and pending publication ownership, waits at saved deadlines where
needed, and becomes quiet after settlement.

## What Changed

- Register terminal GitHub response work with the shared scoped deadline
coordinator, using existing action/delivery/publication/run rows.
- Notify response availability from supported run milestones, native
identity, recovery resolution, issue updates and tree/workspace
restoration writes. Preserve outer transaction commit/rollback.
- Keep GitHub response interpretation in its platform owner. Use the
bounded run projection for both direct authorization and scheduling,
including native presentation guards and deliberate passive outcomes.
- Retain the existing publication lease, markers, source/principal
checks and final receipt precedence. A publication owner or uncertain
outcome keeps its existing authority; the worker does not replay it.
- Remove only recurring terminal-response recovery, preserving the
manual path and neighbouring duties. Add no table or scheduler service.
- Regenerate the original sparse terminal-work index as
`0401_yummy_ultimates.sql`, concurrently and idempotently through the
existing top-level migration runner. Preserve all prior SQL/journal
entries and the five newest snapshots.

## Verification

Published head: `88a209e28b969b5229e9a621aeddfd3cbae9b0cd`, integrated
with landed #17656 (`ba5bba86dcdde32b14d4d7dec1b51898e5f6f22d`) and
master `52b86c2032a189b0ea259c5b0cb7158b07ef788c`.

- **74 distinct current cases pass:** 17 terminal-response
lifecycle/producer cases (1,721 other chat cases skipped), all six
queued-comment consumption regressions for the new upstream query
optimization, all 30 heartbeat completion cases, all eight real/unit
issue-tree control cases and all 13 startup cases. Database build,
server typecheck/build, module boundaries and four fresh migrations
through 0401 pass.
- The earlier **304-case** prepared-parent matrix passes at
`aa72f32641b2e2c680342cd49477272349aca9db`: all 253 GitHub workflow
cases, 30 completion cases, eight issue-tree cases and 13 startup cases.
It retains that revision scope. Repeated cases are not added to the
current 74.
- The terminal matrix covers finalized-history quiet, deleted Board
sources, pending presentation/passive outcomes, outer rollback/commit,
paused/new runs, restart/drain/standby, committed native identity, lease
waits, full-page unrelated history, uncertain publication ownership and
tree/workspace/exhausted-recovery producers.
- A populated 0400 database upgrades to 0401 with all 399 prior
migration receipts identical, exactly one added, and none added on
replay. The terminal index is valid/ready on fresh and upgraded
databases. Its SQL matches the original draft after whitespace
normalization; generation keeps snapshots 0397–0401.
- Normal integration `3c8339a541bf68bc9957b9d5a8df80d3a7c3452d`
preserves the complete 24-path owned binary patch and all five new
master paths. The landed parent tree also equals the previously
published parent tree byte for byte. Both normal merge parents and the
exact composition tree are checked. No force push or rebase occurs.
- [The owner
audit](https://github.com/paperclipai/paperclip/blob/88a209e28b969b5229e9a621aeddfd3cbae9b0cd/doc/plans/2026-10-25-github-terminal-response-sleep-audit.md#acceptance-on-the-landed-github-parent-and-current-master)
preserves the original producer, quietness, failure-isolation,
skipped-suite and presentation-wait results with their scopes. Current
passes do not erase earlier failures or turn skips into passes.
- The audit-only follow-up leaves all owned source/test/migration hashes
unchanged. **Fresh exact-head CI and Greptile 5/5 with no actionable
findings remain required.** No full local repository suite, live GitHub
tenant or deployed sleep result is claimed.

## Risks

- Process-local notifications cover supported application writers and
shared pools. Independent SQL writers and other replicas gain no new
wake guarantee.
- Native terminal status alone does not authorize fallback publication.
Pending presentation and existing publication ownership remain separate
obligations.
- Stop can leave an in-flight provider request settling; admission
fences stop a subsequent request. Unknown outcomes retain their existing
recovery rules.
- Index creation can take time on large histories. Concurrent/idempotent
migration and existing replay recovery remain in charge.
- Worker quiet does not establish host/database suspension. Cloud alarm
coverage and sleep admission remain unchanged.

## Model Used

OpenAI Codex, using reasoning, repository inspection, code execution and
real PostgreSQL tests. The exact model identifier and context-window
size are not exposed in this session.

## Checklist
- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-28 16:51:57 -05:00
DottaandPaperclip f8484a9f8d fix(native): deliver selected skills to remote Codex homes (#18080)
## Thinking Path

> - Paperclip coordinates company agents and preserves their assigned
instructions and approval rules.
> - Native runs pin an immutable skill inventory for each execution.
> - Built-in remote Codex launches prepare that inventory on the
controller, but transfer only authentication, configuration, and the
separate context assets.
> - Codex needs the selected skills under its isolated home. An explicit
skill path does not load a skill outside its registered discovery roots.
> - This pull request transfers the sealed selected inventory to the
path already used by explicit skill inputs.
> - Each launch replaces stale assignments inside the authorized
workspace while preserving provider history.

## Linked Issues or Issue Description

Refs #18025. The corrected first-task instructions exist in the selected
bundle, but remote Codex must receive those bytes before it can follow
them. The legacy skill resolver work in #16646 and #9323 uses different
paths and does not repair native remote launch staging.

**What happened?**

A fresh remote native Codex run could not read its assigned first-task
skill. It produced an approval question instead of the required
confirmation. The Product E2E journey correctly rejected that question
before child creation.

**Expected behavior**

Codex receives the selected immutable skill at the same provider-local
discovery path used by explicit skill input. Removed or unassigned
skills do not remain available after a new launch.

**Steps to reproduce**

1. Prepare an isolated Codex home with one assigned skill.
2. Run the built-in remote launch staging path against a fresh remote
filesystem.
3. Resolve an explicit invocation of that skill. Before the repair, its
provider-local file is missing.

## What Changed

- Transfer only the prepared selected skill inventory into the isolated
remote Codex home before other launch writes.
- Reject writable files, symlinks, missing entries, and extra unassigned
packages in the controller projection.
- Validate each provider-home path component below the authorized
workspace. Reject redirected retained paths before deleting stale
skills.
- Create the private discovery root before native sandbox transfers,
which omit the source-root metadata and can ignore the requested
directory mode.
- Replace stale or empty inventories without changing provider
conversation history, preconfigured homes, other providers, or
plugin-provided launch preparation.
- Exercise the real home materializer and turn resolver through the
existing test-only Runner surface. Document the remote discovery
contract.
- Synchronize an existing Telegram attachment-failure test with the
durable provider-effect commit, preserving its required final states.
This CI repair is a separate test-only commit.

## Verification

- The new production-staging regression failed before the repair because
the resolved skill file was absent.
- All 23 focused staging checks pass. They cover delivery, file modes,
empty/revoked inventories, history retention, extra packages, writable
files, source symlinks, target symlinks, redirected ancestors on
sandbox/SSH, and an authorized workspace alias. The filesystem fixture
packs and extracts actual tar bytes without applying the requested root
mode; it preserves exact projected-file digests and executable bits.
- The unchanged materializer and prepared-launch contracts passed 26
tests. Eight selected native caller checks passed; other cases in that
filtered run were not selected.
- Independent probes used official Codex 0.160.0, the real materializer,
production staging, the real resolver, and a local model endpoint. The
original staging supplied no skill message. The final staging supplied
the complete selected skill body with its exact SHA-256. A final probe
also ran production Daytona `performSyncIn`, backing only its SDK
exec/upload/chmod edge with the local filesystem under umask `022`: the
pre-review source reproduced root `0755`, and the final source retained
root `0700`, package `0555`, file `0444`, and the exact selected digest.
All model requests returned local 403; there were no upstream requests
or credentials.
- Full local `pnpm -r typecheck` and `pnpm build` passed on verification
commit `e7d4e7a9`, based on `60b8089a`. The full local `pnpm test:run`
on that frozen tree was not completed: later embedded PostgreSQL startup
failed because the host could not allocate semaphore sets (`semget`,
SEMMNI/SEMMNS), and the owned attempt was stopped with its log
preserved. Its earlier four caller-fixture failures and one
workspace-conflict failure are recorded separately below; the later
resource error is not an explanation for them. Delivery commit
`567d838d` replayed the initial six-file patch onto `ee67d2ec`;
production was last changed in `23456f51`, followed by test-only commits
`002fa4a7` and `6e8fa595`. All 24 staging checks, all 26
materializer/prepared-launch checks, and the complete native executor
file (968 tests, zero skipped) pass locally. Server typecheck also
passed after these test edits. The complete CI matrix passed on
`002fa4a7`; current-head CI is tracked separately.
- Initial-head CI exposed four caller fixtures that manually wrote
auth/config without preparing the skills inventory. The same four
failures reproduced locally. Those fixtures now use the real home
preparer for their existing empty inventory and assert its transfer; all
34 retained/replacement scenarios and the complete 966-test caller file
pass. A sandboxed full-file attempt could not bind local PostgreSQL
(`EPERM`); it was stopped with its log preserved, then the identical
command passed with local fixture access. Initial-head CI also recorded
timeouts in workspace recovery, approval-queue backoff, and heartbeat
attribution. Their three complete files pass unchanged locally (102
tests); the next CI head also passed those cases. The original slowdown
remains unexplained. The consequent approval cleanup foreign-key failure
is a timeout teardown race already recorded in the owning worker
documentation.
- The frozen full local run also observed an existing workspace-conflict
test fail. The test and owning workspace code are unchanged between the
verification and delivery trees, and the isolated delivery case passes.
The original failure remains unresolved: stopping the later
resource-blocked run prevented the final assertion detail from being
emitted. That isolated pass does not replace the earlier result.
- CI on `23456f51` caught a Telegram test reading
`provider_effect=processing` after observing the provider mock call.
Production commits `processed` later, so the test now waits for the
unchanged complete durable-state assertion. All 18 selected Telegram
attachment/media cases pass (the other 1,670 cases were not selected).
The same CI attempt also recorded an E2E runner shutdown followed by
cancellation, without a failed Playwright assertion; the necessary new
test-only head reruns the matrix. Earlier failures remain preserved and
are not reported as passes.
- Review requested an executor-level preconfigured-home negative test.
Retained and replacement workspace cases now drive the actual launcher,
assert successful context staging, and exclude the isolated home's
skills/auth/config transfers. A counterfactual that removes only the
executor exclusion makes both tests fail; the exact production bytes
were restored before the complete 968-test pass. Flat and nested
selected package delivery is also covered. Optional arbitrary
remote-stderr expansion is deferred; the repair keeps the existing
closed error code and report surface.
- Final head `6e8fa595` passes the complete CI matrix, including
typecheck, build, Runner, browser, and aggregate gates. Two
first-attempt jobs were interrupted by runner shutdown/lost
communication; one unchanged-head rerun of those jobs and their
aggregates passed. The underlying host interruption cause remains
unknown. Both current-head automated reviews are 5/5 with the
implemented finding resolved.
- The original checked-in lockfile fails a fresh frozen install on the
baseline. The repository's maintained resolution-then-frozen sequence
passes. No lockfile change is included.
- Independent source review found and then verified the
retained-ancestor guard. This PR does not claim that the full live Cloud
onboarding campaign has passed. It changes no journey assertion or
approval gate.

## Risks

Launch preparation adds an asynchronous inventory walk, one bounded
remote cleanup command, and one transfer of the selected skill tree.
Those costs grow with selected files and bytes and occur only at
provider launch. A failed validation, cleanup, or transfer prevents
launch. Remote Node is already required by the shared SSH/sandbox
launcher. The selected packages remain read-only; the private discovery
root retains Codex's normal writable mode. No database, API,
credential-routing, or deployment change is included.

## Model Used

OpenAI Codex based on GPT-6, with reasoning, source inspection, tool
use, and code execution. The host does not expose the exact serving
model ID or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-28 16:37:13 -05:00