Commit Graph
12 Commits
Author SHA1 Message Date
Nicky LeachandPaperclip af6b32d82a feat(observability): add provider OTel spans - cache-hit flag, plugin tracer, Daytona pack/transfer spans (#10764)
## Thinking Path

> - Paperclip uses pull requests to ship control-plane changes with
review and audit.
> - This change extends sandbox provider telemetry.
> - The first PR added startup and exec spans.
> - This PR adds provider spans for cache hits, plugin tracer flow, and
Daytona file sync steps.
> - The host must keep the trust boundary and reject unsafe span data.
> - The result is fuller OTel coverage with bounded labels and safe
parentage.

## Linked Issues or Issue Description

**Problem or motivation**

Sandbox provider telemetry lacks an explicit cache-hit signal, plugin
span context, and file-sync pack and transfer spans.
The current proxy for a cache hit is fragile.
The plugin SDK also needs a safe tracer surface and a per-call parent
context.

**Proposed solution**

Add an explicit `cacheHit` flag from the Daytona sandbox handle lookup.
Expose `ctx.tracer` on the plugin context and pass a `traceparent`
string with each call.
Record provider spans on the host with allowlist clamping and capability
checks.
Wrap Daytona file sync pack and transfer steps in spans.

**Alternatives considered**

Keep the old `providerGetMs == 0` proxy.
Reject that path because the cache-hit decision belongs at the handle
lookup, not in a timing proxy.

The host stays the trust boundary for worker span data.
It clamps labels, rejects bad parent data, and gates the worker-to-host
span RPC by capability.
A security review completed before this PR opened.

## What Changed

- Added an explicit `cacheHit` flag from the Daytona sandbox handle
lookup.
- Added `ctx.tracer` on the plugin context and a `traceparent` field in
the per-call context.
- Added host-side span recording with attribute clamping and capability
checks.
- Wrapped Daytona file sync pack and transfer steps in spans.
- Added tests for the host trust boundary, the plugin tracer no-op path,
and the Daytona span paths.

## Verification

- `pnpm --filter @paperclipai/plugin-daytona exec vitest run`
- `pnpm --filter @paperclipai/plugin-sdk exec vitest run`
- `pnpm --filter @paperclipai/server exec vitest run
plugin-host-services environment-execution-target instrumentation
plugin-worker-manager`
- `tsc --noEmit` for server, plugin-sdk, and adapter-utils

## Risks

- Span data now crosses the worker boundary, so the host allowlist and
capability gate must stay strict.
- The `traceparent` path must stay valid and host-owned.
- Daytona file sync spans must not add new round trips.

## Model Used

OpenAI Codex, GPT-5, tool use.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used with version and capability
details
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either linked existing issues with `Fixes:` / `Closes:` /
`Refs:` or described the issue in the PR body
- [x] I have not referenced internal or instance-local Paperclip issues
or links
- [x] My branch name describes the change and contains no internal
Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-08-03 13:09:01 -07:00
Devin FoleyandPaperclip 5c5366d0c1 fix(server): honor explicit plugin RPC timeouts (#10460)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Plugin workers connect Paperclip to external runtimes and sandbox
providers.
> - Some adapter heartbeats run a full sandbox session inside one
`environmentExecute` RPC.
> - The worker manager limited every RPC timeout to 15 minutes, even
when the caller gave a longer timeout.
> - This pull request keeps the normal default timeout behavior but
honors explicit caller timeouts.
> - The benefit is that long sandboxed agent sessions can continue past
15 minutes while other safety guards still bound hung work.

## Linked Issues or Issue Description

No public GitHub issue exists for this bug.

### Bug Report

Pre-submission checklist:
- Searched existing open and closed issues and did not find a duplicate.
- Confirmed the bug is reproducible on `master` from the current source
tree.
- Confirmed the error starts in Paperclip timeout handling, not in an
adapter provider or local configuration.

What happened?
- A sandbox-backed adapter heartbeat can run a full agent session inside
one `environmentExecute` plugin RPC.
- The plugin worker manager capped every RPC timeout at 15 minutes.
- The cap also applied when the caller passed a longer explicit timeout
for an execute-style call.
- A long sandbox command could fail before the adapter budget expired.

Expected behavior:
- Ordinary plugin RPC calls should keep the normal 30-second default
timeout.
- The default timeout path should still have a 15-minute maximum.
- A caller-supplied positive finite timeout should be honored, including
values above 15 minutes.

Steps to reproduce:
1. Use a plugin environment driver that calls `environmentExecute` with
an explicit timeout above 15 minutes.
2. Run a command that stays active longer than 15 minutes and remains
inside the adapter budget.
3. Observe that the worker manager times out the RPC at 15 minutes
before this fix.
4. Run the same path after this fix and observe that the explicit
timeout is used.

Paperclip version or commit:
- Reproduced from the current `master` line before this change.

Deployment mode:
- Local dev or self-hosted server with sandbox-backed execution.

Installation method:
- Built from source.

Agent adapter(s) involved:
- Codex.
- Custom or external plugin adapter.
- Core plugin worker timeout handling.

Database mode:
- Not database-related.

Access context:
- Agent execution context.

Node.js version:
- Not version-specific.

Operating system:
- Not OS-specific.

Relevant logs or output:
```shell
RPC call "environmentExecute" timed out after 900000ms
```

Relevant config:
- Not config-related.

Additional context:
- Execute-style sandbox calls already have adapter inactivity monitors,
platform silent-run checks, and provider command timeouts. This PR
removes the unintended worker-manager clamp only for explicit positive
finite caller timeouts.

Privacy checklist:
- Reviewed all pasted output for PII, user paths, API keys, tokens,
company names, and internal instance links.

Duplicate search:
- Searched open PRs and open issues in `paperclipai/paperclip` for
`environmentExecute timeout`, `MAX_RPC_TIMEOUT_MS`, and
`plugin-worker-manager timeout`.
- Searched the same terms in `HenkDz/paperclip`.
- Found no matching open PRs or issues.
- Compared this patch-id against my open PRs in `paperclipai/paperclip`;
no match was found.

## What Changed

- Added `resolveRpcCallTimeoutMs()` to keep explicit positive finite
timeouts intact.
- Kept the 15-minute maximum only for the default timeout path.
- Updated `callInternal()` to use the new resolver.
- Added unit tests for explicit long timeouts, default timeout clamping,
fractional values, and invalid explicit values.
- Clarified why notification invocation scopes still use the 15-minute
TTL.

## Verification

- `corepack pnpm install --frozen-lockfile`
- `corepack pnpm --filter @paperclipai/plugin-sdk ensure-build-deps`
- `corepack pnpm --filter @paperclipai/server exec vitest run
src/__tests__/plugin-worker-manager.test.ts`
- `corepack pnpm --filter @paperclipai/server exec tsc --noEmit`
- `git diff --check 9574cad3e8 HEAD`
- GitHub PR checks on `bf7bfd0d`: all passing; Storybook visual
regression skipped by workflow.
- Greptile on `bf7bfd0d`: 5/5, no blocking failure remains; prior P2
thread resolved.

## Risks

Low risk. The change affects RPC timeout resolution in the plugin worker
manager. Ordinary plugin calls still use the 30-second default and the
default path is still capped at 15 minutes. Callers that pass explicit
long timeouts now own that budget. Adapter inactivity monitors and
platform silent-run safety checks still bound hung runs.

## Model Used

OpenAI Codex, GPT-5-based coding agent, with shell and GitHub CLI tool
use.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-07-29 14:27:23 -07:00
Michael NguyenandClaude Opus 4.8 f2f168f6a1 fix(plugins): seed proactive company scopes before worker setup() + events.subscribe resolver parity (LOOA-695) (#10113)
- [x] I searched the GitHub PR list for similar PRs (dedup search). No
open PR touches the proactive `events.subscribe` ordering path; #10103
(merged) is the predecessor whose ordering bug this fixes.

## Thinking Path

The gateway worker's outbound push path is permanently dead
(`eventSubscriptions: 0`, `notifier.received: 0`, `decisions.delivered:
0`). The plugin loader authorizes the worker's **proactive company
scopes only AFTER `startWorker` resolves**, but a proactive plugin
issues its one-shot `events.subscribe` calls from `setup()` — which runs
*while `startWorker` is still awaiting the worker's initialize
response*.

So at subscribe time `proactiveCompanyScopes` is still empty →
`contextForWorkerMessage` resolves no scope → the governed-access gate
rejects every subscribe with `company context is required`. The gateway
subscribes once and never retries, so `eventSubscriptions` stays 0 for
the worker's life. This is an **ordering bug in the #10103 fix**, not a
new method — same #9557 governed-access class as `config.get` (#10092)
and `state.get` (#10103).

Confirmed live at the 18:21:21Z worker respawn on `3093c5e` (host log),
and again at the 19:01:04Z restart (still `events.subscribe: company
context is required`, `eventSubscriptions:0`).

## What Changed

1. **Loader ordering** (`plugin-loader.ts`): load
`registry.listConfigs(pluginId)` in a new step 4b **before**
`startWorker`, and thread the configured company set into
`WorkerStartOptions.proactiveCompanyScopes` so the worker handle is
authorized *before the child process issues any host call*. The same
rows are reused for startup config delivery (step 5b) — no second
`listConfigs` round-trip. The runtime config-change path
(`routes/plugins.ts`) still refreshes scopes via
`setProactiveCompanyScopes` (unchanged).
2. **Handle seed** (`plugin-worker-manager.ts`):
`createPluginWorkerHandle` seeds its `proactiveCompanyScopes` set from
options at creation, before spawn.
3. **Resolver/gate parity** (`plugin-worker-manager.ts`):
`referencedCompanyId(method, params)` now mirrors the SDK gate
`requestedCompanyScope` exactly in the functional direction — adds
`events.subscribe → params.filter.companyId` (how `ctx.events.on(name, {
companyId }, fn)` issues its subscribe), and declines the gate's
wildcard cases (`companies.list`, `scopeKind:"company"` without
`scopeId`) so proactive access only ever grants a **single explicit
configured company, never "all"**. Answers LOOA-693 AC#4 (host/gate
extraction parity) in the functional direction.

## Tests

New `plugin-worker-manager.test.ts` cases (drive a real worker):
- a `setup()`-time `events.subscribe({ filter: { companyId } })` for an
options-seeded company is **admitted** (fails on prior code — no options
seed, no filter parity);
- an unconfigured company stays **denied**;
- an unseeded worker stays **denied**.

Full `plugin-worker-manager.test.ts` suite: **21 passed**. Server `tsc
--noEmit`: clean. All PR CI green (typecheck, server/workspace suites,
e2e, build, security scans).

## Risks

- **Scope-widening risk (primary).** The change grants proactive host
access keyed off configured company rows. Mitigated by: the authorized
set is exactly `registry.listConfigs(pluginId).map(companyId)`; wildcard
cases (`companies.list`, company-scoped key without `scopeId`) resolve
to `null`, never `{ kind: all }`; empty/whitespace ids dropped; an empty
config set grants zero proactive access. This is the surface
SecurityEngineer must sign off (see Security gate).
- **In-invocation path unchanged.** Calls carrying a host-issued
`paperclipInvocationId` keep the existing strict single-company match;
the proactive branch only applies when there is no invocation id — so no
regression to the enforced request path.
- **Blast radius.** Loader step 4b is best-effort: a `listConfigs`
failure logs and proceeds with an empty seed (fails closed — no push,
not a crash), matching today's behavior.

## Model Used

Claude Opus 4.8 (`claude-opus-4-8`) via Claude Code (agent: CTO).

## Security gate

Touches the company-scope resolution path (same surface as #10103).
Routed through **SecurityEngineer review before merge** (tracked on
LOOA-696) — must not widen beyond configured companies; in-invocation
strict single-company match untouched; wildcard cases deliberately
declined in the proactive direction.

## Verification once live

- Host log clean of `events.subscribe: company context is required` at
worker start
- loader logs `eventSubscriptions: N>0`
- beat `notifier.received` / `decisions.delivered` move on real
issue/approval activity

Parent: LOOA-629 (outbound push half of "gateway active"). LOOA-695.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>
2026-07-23 12:32:10 -07:00
Michael NguyenandPaperclip 3093c5e694 fix(plugin-worker): resolve a company scope for proactive worker→host calls (#10103)
Host authorizes the plugin's configured companies as the worker's proactive scopes, set by the loader right after the #10092 config-delivery step and refreshed on operator config-save. At the single worker→host chokepoint, a no-invocation call (notifier drain, decision reconcile, mirror drain, digest, aging, liveness beat) that references a configured company resolves to that company's scope, so the #9557 governed-access gate admits it. One change covers the full proactive surface (state.*, issues.*, approvals.*, config.get, secrets.resolve, etc.).

Safety: never widens beyond configured companies (any other company stays denied); in-invocation calls keep #9557's strict single-company match untouched.

Fixes the Slack gateway DM round-trip for LOOA-629. Security review PASS (LOOA-693); non-blocking LOW follow-up tracked in LOOA-694.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-07-23 11:06:02 -07:00
ece8a51e22 [codex] Bundle local branch fixes from PAP-10032 (#6604)
## Thinking Path

> - Paperclip orchestrates AI agents for zero-human companies.
> - This branch accumulated multiple already-tested control-plane,
adapter runtime, invite, workspace, plugin, and UI quality fixes on the
primary Paperclip checkout.
> - `origin/master` advanced while those commits were still local, so
the branch needed to be preserved and reconciled before review.
> - Splitting the branch commit-by-commit against the new base produced
overlapping conflicts with recently merged upstream PRs.
> - This pull request keeps the remaining branch as one standalone PR
because the final diff is 38 files after removing screenshot artifacts,
under Greptile's 100-file cap, and can be merged independently after
review.
> - The benefit is that none of the local work is lost, the branch is
now based on current `origin/master`, and reviewers can evaluate the
reconciled changes in one place.

## What Changed

- Merged the local accumulated branch with current `origin/master` and
resolved the invite-flow overlaps from the newer upstream companies
query helper.
- Preserved the local fixes for invite existing-member behavior, invite
link copy fallback, reusable workspace selection, worktree auth, static
SPA fallback, markdown wrapping, plugin slot registration, cloud
upstream UX/server polish, project sorting, and related tests.
- Removed screenshot artifacts from the PR per review request.
- Kept the PR under the requested file limit: 38 files changed, with no
`pnpm-lock.yaml` or `.github/workflows/*` changes.

## Verification

- `NODE_ENV=test pnpm exec vitest run
ui/src/pages/CompanyInvites.test.tsx ui/src/pages/InviteLanding.test.tsx
ui/src/pages/Projects.test.tsx ui/src/plugins/slots.test.ts
ui/src/components/MarkdownBody.test.tsx
server/src/__tests__/invite-accept-existing-member.test.ts
server/src/__tests__/static-index-html.test.ts
server/src/__tests__/execution-workspaces-service.test.ts
server/src/__tests__/better-auth.test.ts
server/src/__tests__/worktree-config.test.ts`
- `NODE_ENV=test pnpm --filter @paperclipai/ui typecheck`
- `NODE_ENV=test pnpm --filter @paperclipai/server typecheck`
- Confirmed `git diff --name-only origin/master...HEAD | wc -l` is `38`.
- Confirmed no PR diff entries match `pnpm-lock.yaml`,
`.github/workflows/*`, or `screenshots/*`.

## Risks

- Medium review risk because this is a bundled rescue PR rather than
several narrow feature PRs.
- Invite flow and company cache behavior overlapped with newer upstream
changes; the merge resolution intentionally keeps the shared
`companiesListQueryOptions` helper while preserving local
existing-member invite behavior.
- Visual review evidence is no longer attached in-repo because
screenshots were removed from this PR per review request.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex, GPT-5-based coding agent, with repository tool access,
terminal execution, and git/GitHub CLI operations.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] UI screenshots were intentionally removed from this PR per review
request
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Claude Opus 4.7 <noreply@anthropic.com>
Co-authored-by: CodexCoder <codexcoder@paperclip.local>
2026-05-25 07:25:26 -05:00
Dotta a1835cfa5e [codex] Harden plugin runtime invocation scope (#6547)
## Thinking Path

> - Paperclip orchestrates AI-agent companies through a company-scoped
control plane.
> - Plugins extend that control plane, but plugin workers still call
back into host APIs.
> - Those worker-to-host calls need the same company boundary guarantees
as normal API routes.
> - Plugin action handlers also need authenticated actor context from
the host instead of trusting caller-supplied params.
> - This pull request hardens plugin bridge/action scope and keeps
plugin operation issues out of normal issue surfaces.
> - The benefit is safer plugin execution with clearer authorization
boundaries and better test coverage.

## What Changed

- Added host-owned invocation context plumbing for nested plugin worker
calls.
- Added actor context to plugin `performAction` calls and test harness
helpers.
- Enforced company invocation scope on worker-to-host calls and filtered
company lists to the active invocation scope.
- Extended plugin action route tests for board and agent actor context,
spoofed company params, and cross-company rejection.
- Extended plugin worker manager coverage for invocation-scope
propagation.
- Filtered typed and legacy plugin operation issue origins from default
issue/inbox lists.

## Verification

- `pnpm --filter @paperclipai/plugin-sdk build`
- `NODE_ENV=test pnpm exec vitest run
packages/plugins/sdk/tests/host-client-factory.test.ts
packages/plugins/sdk/tests/testing-actions.test.ts
server/src/__tests__/plugin-routes-authz.test.ts
server/src/__tests__/plugin-worker-manager.test.ts
server/src/__tests__/issues-service.test.ts`

Note: embedded Postgres issue-service tests reported host-level Postgres
init skip for 47 tests; the non-embedded targeted tests passed.

## Risks

- Medium: plugin host authorization paths are sensitive, and external
plugins may rely on previously loose company params.
- Mitigation: the change only tightens calls when the host attached a
company invocation scope and includes explicit tests for board, agent,
and nested worker calls.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI GPT-5 Codex via `codex_local`, tool-enabled coding session;
exact context window not exposed by this runtime.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] If this change affects the UI, I have included before/after
screenshots
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge
2026-05-22 09:16:24 -05:00
DottaandPaperclip 38c185fb8b [codex] Add agent permissions and controls plan (#6386)
## Thinking Path

> - Paperclip orchestrates AI agents for zero-human companies by keeping
task ownership, approvals, and operator control inside one control
plane.
> - Agent permissions and plugin-hosted company settings sit on the
boundary between autonomy and governance.
> - V1 needs scoped task assignment rules, plugin extension points, and
clearer company access surfaces without weakening company boundaries.
> - The branch builds the core authorization service, plugin SDK/host
APIs, and UI simplifications needed to support those controls.
> - Paperclip EE plugin surfaces were intentionally moved out of this
core PR per review direction, so this PR now carries only the public
core/plugin infrastructure work.
> - The latest updates preserve the PAP-9937 branch changes that belong
in this PR, remove the `design/` artifacts, and exclude the experimental
`plugin-briefs` package.
> - Greptile feedback was applied through the authorization/audit paths
and the final cleanup commit was re-reviewed at 5/5 with no unresolved
Greptile threads.
> - The benefit is safer assignment control with extension hooks for
richer permission products while preserving simple defaults for normal
operators.

## What Changed

- Added scoped task-assignment authorization decisions and routed
issue/agent assignment mutations through the authorization service.
- Added plugin SDK and host APIs for company settings slots,
authorization policy/grant management, assignment previews, and bridge
invocation scope propagation.
- Simplified core company access UI and moved advanced controls behind
plugin-provided settings surfaces.
- Added retry-now affordances for blocked issue next-step notices.
- Added protected-assignment enforcement for persisted
agent/project/issue policies, including explicit-grant fallback
behavior.
- Added incremental principal-access compatibility backfill for active
agent memberships and role-default human permission grants.
- Added the Markdown code block wrap action fix from the latest branch
changes.
- Removed `design/` artifacts from the PR and removed
`packages/plugins/plugin-briefs` from the final diff.
- Addressed Greptile feedback for plugin actor sanitization, legacy
membership handling, audit pagination, unknown grant-scope metadata, and
startup test mocks.

## Verification

- `pnpm exec vitest run server/src/__tests__/access-service.test.ts
server/src/__tests__/company-portability.test.ts` -> 2 files passed, 54
tests passed.
- `pnpm exec vitest run
server/src/__tests__/server-startup-feedback-export.test.ts
server/src/__tests__/access-service.test.ts
server/src/__tests__/company-portability.test.ts` -> 3 files passed, 62
tests passed.
- `pnpm exec vitest run
server/src/__tests__/authorization-service.test.ts
server/src/__tests__/plugin-access-authorization-host-services.test.ts
server/src/__tests__/server-startup-feedback-export.test.ts` -> 3 files
passed, 28 tests passed.
- `pnpm --filter @paperclipai/server typecheck` -> passed.
- `git diff --check` -> passed.
- `node ./scripts/check-docker-deps-stage.mjs` -> passed.
- `CI=true pnpm install --frozen-lockfile --ignore-scripts` -> passed
with no lockfile update.
- `pnpm exec vitest run
ui/src/components/MarkdownBody.interaction.test.tsx` -> 1 test passed.
- `git ls-files design packages/plugins/plugin-briefs | wc -l` -> 0.
- GitHub CI on `40cd83b53` -> all checks passed, merge state `CLEAN`.
- Greptile on `40cd83b53` -> 5/5, 102 files reviewed, 0
comments/annotations added, 0 unresolved review threads.
- Confirmed the PR diff contains no `design/`,
`packages/plugins/plugin-briefs`, `pnpm-lock.yaml`, or
`.github/workflows` changes.

## Risks

- Medium: task assignment authorization paths are behaviorally stricter
for protected/private policy data, so existing plugin-authored policies
may block assignment until explicit grants or approval flows are
configured.
- Medium: plugin-host authorization APIs expand the surface area
available to trusted plugins and need careful review for company
scoping.
- Low: startup now performs a principal-access compatibility backfill,
but the migration and runtime backfill use conflict-tolerant inserts.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex, GPT-5 coding agent, tool-enabled workflow with shell,
git, and GitHub CLI access.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] If this change affects the UI, I have included before/after
screenshots
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-05-22 08:12:52 -05:00
DottaandPaperclip c91a062326 [codex] Runtime control-plane fixes (#6380)
## Thinking Path

> - Paperclip orchestrates AI agents through a server-side control plane
> - That control plane depends on reliable issue state transitions,
plugin lifecycle behavior, import limits, and startup/shutdown handling
> - Several small runtime fixes had accumulated on the working branch
and were mixed with larger feature work
> - Keeping them separate makes the correctness fixes reviewable and
mergeable without waiting for cloud-sync UI work
> - This pull request groups the server/runtime control-plane fixes into
one standalone branch
> - The benefit is a tighter, safer runtime baseline for retries,
imports, plugin migrations, feedback flushing, and trusted cloud import
handling

## What Changed

- Fixed updated issue list pagination sorting and scheduled retry
comment handling.
- Re-applied pending plugin migrations during hot reload and fixed
plugin-schema worktree seed restore.
- Hardened public tenant DB startup, portable import body limits,
trusted cloud import errors, and trusted cloud tenant import mutation
access.
- Expired stale request confirmations after user comments.
- Added feedback export shutdown hardening so database-unavailable flush
loops stop cleanly.
- Guarded plugin worker `error` event emission when no listener is
registered.

## Verification

- `pnpm install --frozen-lockfile --ignore-scripts`
- `pnpm --filter @paperclipai/plugin-sdk build`
- `npm run install --prefix
node_modules/.pnpm/sqlite3@5.1.7/node_modules/sqlite3`
- `pnpm exec vitest run server/src/__tests__/issues-service.test.ts
server/src/__tests__/plugin-lifecycle-restart.test.ts
server/src/__tests__/server-startup-feedback-export.test.ts
server/src/__tests__/issue-comment-reopen-routes.test.ts
server/src/__tests__/issue-thread-interactions-service.test.ts
server/src/__tests__/issue-thread-interaction-routes.test.ts
server/src/__tests__/body-limits.test.ts
server/src/__tests__/feedback-flush-controller.test.ts
server/src/__tests__/error-handler.test.ts
server/src/__tests__/board-mutation-guard.test.ts
packages/db/src/backup-lib.test.ts` initially exposed local setup issues
and two 5s test timeouts.
- Rerun after local prereq build: `pnpm exec vitest run --testTimeout
15000 server/src/__tests__/issue-comment-reopen-routes.test.ts
server/src/__tests__/issue-thread-interaction-routes.test.ts
server/src/__tests__/feedback-flush-controller.test.ts
server/src/__tests__/server-startup-feedback-export.test.ts` passed.
- Some embedded Postgres-backed tests skipped on this host because local
Postgres init was unavailable.

## Risks

- Runtime-touching branch: startup/shutdown and issue interaction
behavior should be reviewed carefully.
- The feedback export change disables repeated flush attempts only for
database connection-refused failures; other upload failures still log
normally.
- The plugin worker error guard avoids process crashes from unhandled
EventEmitter errors but may hide errors from code paths that expected an
emitted listener.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex, GPT-5-based coding agent with local shell/git/tool use.
Exact hosted model ID and context-window size are not exposed by the
local Paperclip adapter runtime.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] If this change affects the UI, I have included before/after
screenshots
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-05-20 10:37:11 -05:00
Devin FoleyandPaperclip 1bd44c8a0d Harden Cloudflare sandbox execution (#5967)
## Thinking Path

> - Paperclip orchestrates AI agents for zero-human companies.
> - Remote-managed adapters need sandbox/environment execution to behave
like real agent runs, not just local host probes.
> - The Cloudflare sandbox path was the weakest leg in the SSH +
Cloudflare QA matrix because bridge execution could truncate output,
time out long-running installs, and under-provision the worker instance.
> - That made several adapters fail for reasons unrelated to their
actual business logic, which blocks confidence in Paperclip's non-local
environment model.
> - This pull request hardens the Cloudflare bridge/runtime path and
adjusts sandbox probe budgets so adapter verification matches the
measured behavior of the fixed environment.
> - It also corrects the Pi sandbox install command so the QA matrix
exercises a real, supported install path.
> - The benefit is a materially more reliable SSH + Cloudflare adapter
matrix with fewer false negatives and clearer failure boundaries.

## What Changed

- Switched the Cloudflare bridge worker instance type to `standard-2`
for the QA-matrix execution path.
- Raised Cloudflare bridge/plugin-worker timeout budgets and added SSE
keepalives so long-running install/exec calls can complete instead of
dying at the transport layer.
- Fixed Cloudflare bridge-channel command handling to avoid dropped
final stdout chunks on short-lived execs.
- Made Claude, OpenCode, and Cursor sandbox probe timeouts
configurable/sandbox-aware, then tightened the defaults to the measured
post-fix range.
- Updated the Pi sandbox install command to use the package currently
installed by the official `pi.dev` installer, pinned to a specific npm
version.
- Added/updated tests around Cloudflare bridge behavior and adapter
sandbox probe paths.

## Verification

- `pnpm --filter @paperclipai/adapter-claude-local typecheck`
- `pnpm --filter @paperclipai/adapter-opencode-local typecheck`
- `pnpm --filter @paperclipai/adapter-cursor-local typecheck`
- `pnpm vitest run packages/adapters/cursor-local
packages/adapters/claude-local packages/adapters/opencode-local
packages/adapters/pi-local packages/plugins/sandbox-providers/cloudflare
server/src/services/__tests__/plugin-worker-manager.test.ts`
- Manual QA on the dedicated dev instance using the SSH + Cloudflare
environment matrix (`ENV-29` through `ENV-40`). Clean end-to-end passes:
SSH `claude_local`, `codex_local`, `cursor`, `gemini_local`; Cloudflare
`claude_local`, `codex_local`, `cursor`, `gemini_local`.

## Risks

- Cloudflare sandbox cost increases because the bridge worker now runs
on `standard-2` instead of `lite`.
- Higher timeout ceilings can delay surfacing truly hung Cloudflare
bridge calls, even though they remove transport-level false negatives.
- The manual heartbeat matrix still exposed follow-on
execution/sync/disposition bugs in `opencode_local` and `pi_local`;
those are not fixed by this PR.

## Model Used

- OpenAI `gpt-5.4` via Paperclip `codex_local`, reasoning effort `high`,
tool use enabled, repo search enabled.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] If this change affects the UI, I have included before/after
screenshots (not applicable)
- [x] I have updated relevant documentation to reflect my changes (not
applicable)
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-05-13 22:00:10 -07:00
Devin Foley fe3904f434 Stabilize runtime probes and Codex env tests (#5445)
## Thinking Path

> - Paperclip orchestrates AI agents for zero-human companies
> - Adapters expose a Test action that probes the configured runtime —
install, resolvability, hello — to give operators a fast yes/no on
whether an environment is healthy
> - The Codex test path was running its hello probe directly without
going through the managed-runtime preparation that production runs use,
so a healthy production setup could still report a probe failure
> - The plugin worker manager wasn't surfacing terminated workers
cleanly, leaving the runtime probe waiting on a dead worker until the
request timed out
> - This pull request routes the Codex test probe through
`prepareAdapterExecutionTargetRuntime` (so it sees the same managed
Codex home production sees), exposes `commandCwd` on
`createCommandManagedRuntimeClient` so callers can target a per-probe
directory without leaking the workspace `remoteCwd`, and propagates
plugin-worker termination as a usable error instead of a hang
> - The benefit is the Codex Test action mirrors production behavior
end-to-end, and probes against a terminated plugin worker fail fast
instead of timing out

## What Changed

- `packages/adapter-utils/src/command-managed-runtime.ts`: rename the
`remoteCwd` knob to `commandCwd` so callers can target a per-probe
directory without inheriting the workspace cwd; matching test coverage
in `command-managed-runtime.test.ts`
- `packages/adapter-utils/src/sandbox-callback-bridge.{ts,test.ts}`:
small fixes to keep callback bridge stop semantics deterministic
- `packages/adapters/codex-local/src/server/test.ts`: thread the Codex
hello probe through `prepareAdapterExecutionTargetRuntime` +
`prepareManagedCodexHome` so the probe sees the same managed home
production sees; new `test.remote.test.ts` covers the remote probe path
- `packages/adapters/cursor-local/src/server/execute.ts`: small
probe-side cleanup that aligns with the new commandCwd contract
- `server/src/services/plugin-worker-manager.ts`: surface plugin-worker
termination as a structured error so callers fail fast; new
`plugin-worker-terminated.cjs` fixture and
`plugin-worker-manager.test.ts` cases pin the behavior

## Verification

- `pnpm vitest run --no-coverage --project @paperclipai/adapter-utils
--project @paperclipai/adapter-codex-local --project
@paperclipai/adapter-cursor-local --project @paperclipai/server` —
1749/1750 passing (1 unrelated skip)
- `pnpm typecheck` clean

## Risks

Low–medium. The `remoteCwd → commandCwd` rename is a parameter renaming
on an internal helper used only by adapter test/execute paths in this
repo. The plugin-worker-terminated path was previously a hang; failing
fast may surface latent timeouts as explicit termination errors in
callers that already expected them.

## Model Used

Claude Opus 4.7 (1M context)

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable — new tests cover
commandCwd, plugin-worker termination, and Codex remote test path
- [x] If this change affects the UI, I have included before/after
screenshots — N/A (no UI)
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge

---

> **Stacked PR.** Sits on top of #5444 which adds the per-run runtime
API surface this PR builds on. Cumulative diff against `master` includes
that PR's content; the files touched by *this* PR's commit are listed
under "What Changed" above. Will rebase onto `master` and force-push
once #5444 merges.
2026-05-07 14:52:31 -07:00
DottaandPaperclip 9c6f551595 [codex] Add plugin orchestration host APIs (#4114)
## Thinking Path

> - Paperclip orchestrates AI agents for zero-human companies.
> - The plugin system is the extension path for optional capabilities
that should not require core product changes for every integration.
> - Plugins need scoped host APIs for issue orchestration, documents,
wakeups, summaries, activity attribution, and isolated database state.
> - Without those host APIs, richer plugins either cannot coordinate
Paperclip work safely or need privileged core-side special cases.
> - This pull request adds the plugin orchestration host surface, scoped
route dispatch, a database namespace layer, and a smoke plugin that
exercises the contract.
> - The benefit is a broader plugin API that remains company-scoped,
auditable, and covered by tests.

## What Changed

- Added plugin orchestration host APIs for issue creation, document
access, wakeups, summaries, plugin-origin activity, and scoped API route
dispatch.
- Added plugin database namespace tables, schema exports, migration
checks, and idempotent replay coverage under migration
`0059_plugin_database_namespaces`.
- Added shared plugin route/API types and validators used by server and
SDK boundaries.
- Expanded plugin SDK types, protocol helpers, worker RPC host behavior,
and testing utilities for orchestration flows.
- Added the `plugin-orchestration-smoke-example` package to exercise
scoped routes, restricted database namespaces, issue orchestration,
documents, wakeups, summaries, and UI status surfaces.
- Kept the new orchestration smoke fixture out of the root pnpm
workspace importer so this PR preserves the repository policy of not
committing `pnpm-lock.yaml`.
- Updated plugin docs and database docs for the new orchestration and
database namespace surfaces.
- Rebased the branch onto `public-gh/master`, resolved conflicts, and
removed `pnpm-lock.yaml` from the final PR diff.

## Verification

- `pnpm install --frozen-lockfile`
- `pnpm --filter @paperclipai/db typecheck`
- `pnpm exec vitest run packages/db/src/client.test.ts`
- `pnpm exec vitest run server/src/__tests__/plugin-database.test.ts
server/src/__tests__/plugin-orchestration-apis.test.ts
server/src/__tests__/plugin-routes-authz.test.ts
server/src/__tests__/plugin-scoped-api-routes.test.ts
server/src/__tests__/plugin-sdk-orchestration-contract.test.ts`
- From `packages/plugins/examples/plugin-orchestration-smoke-example`:
`pnpm exec vitest run --config ./vitest.config.ts`
- `pnpm --dir
packages/plugins/examples/plugin-orchestration-smoke-example run
typecheck`
- `pnpm --filter @paperclipai/server typecheck`
- PR CI on latest head `293fc67c`: `policy`, `verify`, `e2e`, and
`security/snyk` all passed.

## Risks

- Medium risk: this expands plugin host authority, so route auth,
company scoping, and plugin-origin activity attribution need careful
review.
- Medium risk: database namespace migration behavior must remain
idempotent for environments that may have seen earlier branch versions.
- Medium risk: the orchestration smoke fixture is intentionally excluded
from the root workspace importer to avoid a `pnpm-lock.yaml` PR diff;
direct fixture verification remains listed above.
- Low operational risk from the PR setup itself: the branch is rebased
onto current `master`, the migration is ordered after upstream
`0057`/`0058`, and `pnpm-lock.yaml` is not in the final diff.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

Roadmap checked: this work aligns with the completed Plugin system
milestone and extends the plugin surface rather than duplicating an
unrelated planned core feature.

## Model Used

- OpenAI Codex, GPT-5-based coding agent in a tool-enabled CLI
environment. Exact hosted model build and context-window size are not
exposed by the runtime; reasoning/tool use were enabled for repository
inspection, editing, testing, git operations, and PR creation.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] If this change affects the UI, I have included before/after
screenshots (N/A: no core UI screen change; example plugin UI contract
is covered by tests)
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-04-20 08:52:51 -05:00
Dotta 80cdbdbd47 Add plugin framework and settings UI 2026-03-13 16:22:34 -05:00