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fa3cd6f330 |
fix(native): end provider startup rejections with Retry instead of an ownership hold (#20808)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work
> - The Paperclip Runner starts Codex for native runs. On a remote
sandbox such as Daytona, the sandbox is the OS boundary.
> - A Codex planning run on Daytona failed in `session.open`. Codex's
read-only sandbox helper could not set up loopback in the container
(`bwrap: loopback: Failed RTM_NEWADDR`), and Codex loads `AGENTS.md`
through that helper.
> - The server treated that definite provider rejection as an
interrupted transport. Its same-run bootstrap retry went through remote
restart recovery and stopped on `ambiguous_remote_recovery_evidence`.
The task showed "Recovering saved work…" and no Retry, although no
provider work was done.
> - This pull request gives such startup rejections a named, permanent
outcome with a working Retry, and pins ask and standard runs to the
external sandbox policy.
> - The benefit is that a provider startup refusal ends as a clear
failure with Retry, never as an ownership hold.
## Linked Issues or Issue Description
**What happened?**
A Codex planning run on a Daytona sandbox failed in `session.open` with
`error creating thread: failed to load AGENTS.md instructions ... bwrap:
loopback: Failed RTM_NEWADDR: Operation not permitted`. The server
recorded `native_session_interrupted` with recovery mode
`bootstrap_retry`. Thirty seconds later, remote restart recovery blocked
the run with `native_restart_recovery_blocked` /
`ambiguous_remote_recovery_evidence`. No server restart happened. All
default-mode Codex runs on the same image succeeded that day; only the
planning run failed.
**Expected behavior**
A provider startup failure with no provider work must end as a clear
failure with a working Retry, or get a bounded automatic retry that also
ends with Retry. It must never become an ambiguous-ownership hold.
**Steps to reproduce**
1. `cd server && npx vitest run
src/services/native-runtime/native-startup-rejected-retry.integration.test.ts`.
On master the deterministic case is `retryable_failure` /
`native_session_interrupted`.
2. `npx vitest run
src/services/native-runtime/native-session-executor.test.ts -t "provider
itself rejected"`. On master the new code is not produced.
**Paperclip version or commit**
master at
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556b249897 |
fix: preserve exact Markdown in native document writes (#20605)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Agents save Markdown documents through native tools and REST routes. > - The native write_document handler trims the supplied body. > - This removes final newlines and can change Markdown whitespace. > - This pull request preserves the original body after required-content validation. > - Agents can now write and read the same Markdown string across these paths. ## Linked Issues or Issue Description **What happened?** The native write_document tool removes leading and trailing whitespace. A body with one final newline loses that newline on read-back. The REST document PUT and write_task_document preserve it. **Expected behavior** The native write_document tool must preserve the supplied Markdown body exactly. Required-content checks and key and title normalization must stay in place. REST-backed paths retain surrounding whitespace and keep their existing escaped-line-break conversion for single-line payloads. **Steps to reproduce** 1. Write a disposable document through write_document with a final newline. 2. Read the document and compare the full body with the supplied string. 3. Repeat through write_task_document and REST. These paths preserve the string. Related work: Refs #18824. That change aligns document keys. This change preserves body strings. A search of open and closed PRs found no duplicate fix. ## What Changed - Use a separate untrimmed required-string helper for the document body. Keep the existing requiredString callback signature and all other field normalization. - Add real tool-handler, database, and authenticated HTTP tests for create, update, read-back, and replay. Cover leading spaces, hard breaks, blank lines, final newlines, no final newline, Unicode, and mixed line endings. - Keep blank and invalid bodies rejected. Document whitespace preservation and the existing REST escaped-line-break exception. - Fix the Runner support archive-scanner shutdown defect exposed by CI: rejected ZIP scanners now receive SIGKILL so an ignored SIGTERM cannot leave publication waiting for process closure. Keep all secret and archive limits unchanged. A real child-process regression fails before the change and passes afterward. - Address all three initial review findings: callback type compatibility, contribution comment policy, and the REST documentation limit. ## Verification Final tested head: `c9ff8cf3f83aa19e5d8313c65816a3a2e6562368`. - All applicable [CI checks](https://github.com/paperclipai/paperclip/actions/runs/43019885807) passed. This includes typecheck, build, Runner support, Rust, native Runner, general tests, serialized suites, all eight E2E shards, and the required aggregate gates. - [Greptile review](https://github.com/paperclipai/paperclip/runs/130520170309) passed on this head with confidence 5/5. All three review threads are resolved. The independent Paperclip review also reports 5/5 with no findings. - Red at `7368a0b15c2f02107778a961144d86e2eb59a952`: `pnpm --dir server exec vitest run src/services/native-runtime/task-document-body.integration.test.ts` failed because write_document removed the final newline. Cross-task and REST cases passed. - Green on the final source: 176 tests passed across the document body, document key, native tool authority, task scope, document service, and document route suites. The tests cover create, update, exact read-back, replay, blank rejection, revision guards, and company scope. - The ZIP shutdown regression failed before repair with “scanner did not stop”. After repair, 54 tests passed across zip-inspection-shutdown, private-reporter-artifacts, manual-private-cell-report-assets, and private-evidence-budget. The regression uses a real process that ignores SIGTERM. - Earlier CI runs had two archive-related timeouts. The source repair above replaces blind reruns. The Runner support suite and aggregate verify gate now pass. - A disposable live native document reproduced the original whitespace loss. REST preserved the same string. The fixed handler passed local integration tests. The running service has not been deployed. - Local environment: Linux x64, Node 25.9.0, Vitest 5.0.3, and embedded PostgreSQL. Local Rust preparation was unavailable because cargo is absent. Final-head CI passed Rust verification. `pnpm verify --explain` requested broad CI because evidence.ts is a global input. Required CI supplied that coverage. ## Risks Low risk. The change retains required-content validation. The product change affects document body whitespace handling. The CI repair forcefully stops only already-rejected archive scanners; it retains fail-closed publication and all existing scan limits. It does not change schema, authorization, revision guards, receipts, or persistence. ## Model Used CI repair continuation: GPT-6.1, using repository tools and code execution. OpenAI Codex, GPT-6 (the exact serving model ID and context window were not exposed in this session). Used reasoning, repository tools, and code execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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84fc67317e |
feat(runner): export authorized read responses as artifacts (#20606)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Native agents use authorized API reads to get task evidence. > - Small responses return inline JSON, so an agent must copy each document into a local helper. > - Copying changes bytes and uses model output for data transport. > - This pull request adds an explicit artifact export for non-sensitive GET reads. > - Helpers can download the exact response bytes and check their identity. ## Linked Issues or Issue Description **What existing behavior does this improve?** The native `call_api` response capture path. **Current behavior** Small JSON responses have no artifact reference. Local helpers need the model to copy the JSON data. **Proposed behavior** `saveResponse: true` saves a complete authorized GET response below or above the inline threshold. Zero-byte success returns an explicit empty receipt without storage. The receipt returns an artifact ID, byte size and SHA-256 for `download_artifact`. Other callers keep the current behavior. Related work: #17393 covers saved app-tool result size. #18105 covers mutation response paging. This change adds an explicit read export. ## What Changed - Add GET-only `saveResponse` validation and capture through the current artifact store. - Refuse sensitive operations, denied reads, partial responses and combined text paging. - Keep route authorization, actor visibility, storage budgets and download integrity checks. - Update the native tool contract, generated catalogs and API guide. - Add boundary and real-route byte comparison tests. - Preserve saved run state. This is an optional input field; old calls and receipts keep their current shape. No schema migration or identity reset is needed. The seeded catalog fixture is generated. ## Verification - Final published head `d47b52e1bf412418e24768f865cc139097a6d068`: [typecheck, build, all tests, Linux Rust and aggregate verify passed](https://github.com/paperclipai/paperclip/actions/runs/42918883477); [Windows Rust passed](https://github.com/paperclipai/paperclip/actions/runs/42918883348); [quality gate passed](https://github.com/paperclipai/paperclip/actions/runs/42918883016). Greptile completed successfully at this exact head, 5/5; all five review threads resolved. Automated Paperclip review remains queued due to a failed reviewer run; no final verdict is claimed for that service. - Current head: `d47b52e1bf412418e24768f865cc139097a6d068`. Merged current master to refresh GitHub's stale base snapshot; the PR now contains exactly nine intended artifact transport files, with no lockfile or UI changes. Fresh final-head CI/review is required. - Previous head `986ad87490fff93cfec313ba6fd56d3dc0bb665b` passed typecheck, build, Rust verification, artifact/native suites and completed test shards; remaining shards were still running when the base snapshot was refreshed. Greptile was 5/5, with one unrelated master UI finding resolved as outside the corrected PR diff. - Review fixes verified at `986ad87490fff93cfec313ba6fd56d3dc0bb665b`: 2,135 checks passed across the five focused suites; Runner TypeScript build and regenerated contract/catalog checks passed. This head replays the original implementation on current master and retains the original PR commit in its history. - Review red/green at replayed baseline `da3a1d4de9`: empty HTTP 200/204 tests failed with real storage's `File is empty`, then passed with zero new assets or quota reservations. Error-body tests failed without size/truncation fields, then passed. - Empty successes now return `empty: true`, `byteSize: 0`, `data: null` without storage. Nonempty JSON results such as `[]` export normally. Error receipts report byte size and truncation. Docs and tool guidance state the existing 10 MiB download limit and paged text alternative. - Previous-head CI typecheck/build/tests passed except the Rust process-lineage cleanup test (`unattributed_orphan`); final-head CI and fresh review remain required. - Red at `7368a0b15c`: the small-document export test failed with `Invalid call_api arguments` before production edits. The same check passed after the change. - Final post-rebase run at `6e7a35ed6a59bb74f4218312d9f10557099433c3`: all 2,124 checks passed across the API, capture, artifact boundary, real-route export and artifact download suites. - Real-route export test passed: HTTP bytes, stored bytes and downloaded bytes were equal. Foreign-company access and forged download metadata were rejected. - Existing API integration and artifact suites passed. Nearby API integration checks also passed (59 passed, 2 skipped). - Disposable native helper scan passed: 12 existing documents, 15 GET requests, zero mutations, 73,919 bytes, 17.985 seconds. All files passed size/hash checks. The bridge passed file references only. Production token savings were not measured. - Runner TypeScript build and generated contract checks passed. - `pnpm verify` returned exit 2 and required broader CI coverage. Local preflight stopped at missing Cargo after dependency and SDK setup. The local server typecheck stopped during the cycle layer without a diagnostic; the container recorded an OOM kill. This check has no pass verdict. Required CI must cover typecheck, build and test at the final head. ## Risks - Each explicit export uses the current capture budget and storage admission. Frequent small exports can reach that budget. - An artifact holds one HTTP response. Callers must still follow list pagination. - No database or saved-state migration is required. The option does not change default response behavior. ## Model Used OpenAI `gpt-6.1-sol`, through Codex in Paperclip Runner. Used reasoning, shell execution and native tools. The active agent configuration supplied this exact model ID. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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bc453342ef |
fix(native): start a cold server from active database checkpoints (#20792)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Native runs save their controller state in complete encrypted database checkpoints. > - A rolling update starts a replacement with an empty local home while the old server still owns active remote work. > - Startup required a local controller marker before it checked the active database authority. > - The replacement could report `native_controllers_require_migration` even when the checkpoint, workspace and live owner were valid. > - This change uses the existing complete checkpoint proof when the local marker is absent. A marker that exists keeps its strict validation. > - The benefit is that a cold replacement can start while supported remote work continues. ## Linked Issues or Issue Description **What happened?** A volume-free replacement failed startup with `native_controllers_require_migration`. The old server had a local external-control marker and a valid active database checkpoint. The replacement had the checkpoint but no local marker. **Expected behavior** An absent local marker must not make a complete, valid database checkpoint into a local migration obligation. Missing, corrupt or mismatched durable evidence must still refuse startup. **Steps to reproduce** 1. Save a full native checkpoint with its real checkpoint writer. Keep its source run active with a live generation-one owner and its bound remote workspace. 2. Remove only the local controller marker to represent a cold replacement home. 3. Inspect native controller obligations. Before this change, the inspection returns true. **Paperclip version or commit** Reproduced on `eb75c9bb855ce83915256efc9d6b308a272cdeff`. The fix is based on `c44a422607f9f08c39ad98f9c830fe6e3dba8dc2`. **Deployment mode** Volume-free server with native remote execution and database checkpoint persistence. ## What Changed - Let an absent local marker use the existing full checkpoint, run, session, workspace and owner checks. - Keep validation of every present marker and the final file reread that detects a change during inspection. - Add a cold-home variant of the existing real PostgreSQL active-checkpoint regression. Its live source owner has a different boot ID from the inspecting process. - Run the same refusal controls for missing checkpoint parts, invalid identity, stale leases, changed task/workspace bindings and invalid local markers. ## Verification - Genuine RED: the cold-home case failed on unchanged production code with `expected true to be false` after the real checkpoint was saved and only its local marker was removed. - Rebased GREEN, Node 24: `node node_modules/vitest/vitest.mjs run --project @paperclipai/server server/src/services/native-runtime/native-controller-migration.integration.test.ts -t 'offline native controller migration \(active_(durable|durable_cold|warm)\)'` — 3 passed, 53 unrelated cases filtered out. These controls use disposable real PostgreSQL and the canonical encrypted checkpoint writer/reader. - Server layered TypeScript check: `cd server && node scripts/typecheck-layers.mjs` — PASS for all source and test layers. - `node scripts/check-module-boundaries.mjs` and `git diff --check` — PASS. - [Required CI](https://github.com/paperclipai/paperclip/actions/runs/43003635878) passed on `7c5cb8fc16f3f7e3bcfec0ce10bf0b43d638d09b`. All 60 check runs are terminal: 55 success, 4 skipped and one neutral 5/5 review. Greptile is 5/5 with no review threads. Live rolling-update acceptance remains a separate delivery check. ## Risks - No schema or saved-state format changes. State saved by the previous release uses the same checkpoint reader. - The absent-marker path still needs a complete valid checkpoint and the existing identity, workspace and owner proof. Present legacy or malformed markers still refuse. - This changes eligibility only. It does not take ownership, launch work, copy state, release a lease or alter admission. - No command or configuration changes need operator documentation. ## Model Used OpenAI Codex, GPT-6, with reasoning, tool use and code execution. The host does not expose a more specific model ID or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal issue id - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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c44a422607 |
fix(native): retry a follow-up whose own server stopped serving before its remote runner (#20786)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The native runtime runs each agent task through a Runner. On a graceful shutdown (SIGTERM), the server closes its runtime API listener first, then drains runs. > - A run that is still preparing can reach the runtime API lookup after the listener closed. It then fails with `local_runtime_api_listener_unavailable` before it reaches its Runner. > - For a remote (sandbox) Runner, the executor already settles this failure as a same-run bootstrap retry, so the next server restarts it with no manual Retry. > - A follow-up run is different. Admission rebinds the settled predecessor's provider session into the follow-up's run as its checkpoint. The recovery evidence saw "a checkpoint exists" and called the failure `ambiguous_state`. That blocked the task and the user had to click Retry. > - This pull request recognizes that carried checkpoint. When this server's own listener closed, the run has no Runner checkpoint and no provider event of its own, and a settled predecessor saved that exact provider session, the failure is a same-run bootstrap retry. > - The benefit is that a graceful restart during a follow-up's preparation no longer needs a manual Retry. ## Linked Issues or Issue Description **What happened?** In a Daytona restart-chaos wave (codex, remote sandbox Runner), a follow-up run was created. About 2 s later a graceful SIGTERM drain began. The draining server kept preparing the run. `resolveLocalRuntimeApiUrl()` in `createRunnerdBackendWithinSessionClaim` threw `LocalRuntimeApiListenerClosedError`. The run failed with `local_runtime_api_listener_unavailable`. The task went to `blocked` with a board-owned recovery action, and it needed a manual Retry. The manual Retry worked. **Expected behavior** No provider work started for the run. The next server must pick it up automatically. **Steps to reproduce** 1. Finish a remote native run for a task, so that its provider session is saved. 2. Comment on the task to start a follow-up run. The follow-up carries the saved provider session as its admission checkpoint. 3. Send SIGTERM while the follow-up is in preparation, before it reaches its Runner. 4. The follow-up fails with `ambiguous_state` and the task is blocked. **Paperclip version or commit** `master` at `62b7733161` (wave) and `eb75c9bb85` (this branch base). Refs #20514, #20721 ## What Changed - `native-session-executor.ts` (`nativeProviderRecoveryEvidence`): add one narrow case before the generic checks. When all of these are true, return `bootstrap_retry` (with `checkpointExists: true` and `providerSessionEstablished: false`): - the source failure is `local_runtime_api_listener_unavailable` (this server stopped serving); - the target is remote, the run has the current preparation fencing version, and the run has no Runner controller checkpoint; - the run has no provider event; - the run checkpoint has no cursor, turn, terminal, result, or pending request of its own; - a settled earlier run of the same native session saved that exact provider session. - `native-restart-recovery.ts`: export the existing `carriesSettledPredecessorSession` proof, so that the executor uses the same proof that restart recovery uses for rebound sessions. - `native-controller-recovery.integration.test.ts`: add a regression test. It also shows that the verdict stays `ambiguous_state` for a different failure code, for an unknown provider session, for a checkpoint with its own turn, and for a run with a provider event. ## Verification - Red on master: `cd server && npx vitest run src/services/native-runtime/native-controller-recovery.integration.test.ts -t "own server stopped serving"` returned `recoveryMode: "ambiguous_state", providerSessionEstablished: true`. - Green with the fix: the same file passes (25 tests). - `npx vitest run src/services/native-runtime/native-startup-retry.integration.test.ts src/services/native-runtime/native-runner-restart-preparation.integration.test.ts`: 43 passed (the existing closed-listener bootstrap-retry and ambiguous cases are unchanged). - `cd server && pnpm typecheck`: passed. - Not run: a live restart-chaos wave. ## Risks - Low risk. The new case applies only to the closed-listener failure on a remote target. It needs durable proof that the run has no Runner checkpoint and no provider event, and that the provider session belongs to a settled predecessor. All other cases keep their earlier verdict. - If the retry later finds different evidence, the existing restart recovery and resumption checks re-prove it and fail closed. The task then keeps a working Retry. - Upgrade safety: no persisted shape changes. The proof reads only rows that older servers already write (`sessionCheckpoint`, `nativePreparationFencingVersion`, Runner checkpoints, run events). A run that an older server prepared without the fencing version keeps its earlier verdict. - No waits are added before `turn.start`. The new queries run only on the failure path. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, with tool use and code execution in Claude Code. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude <noreply@anthropic.com> |
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59ded526be |
fix(native): ask once to re-check Paperclip before resting blocked on its own stall (#20779)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Native runs report their result through a completion report. The server checks the report before it accepts it. > - When the Paperclip server pauses or restarts, the agent's Paperclip tool calls stay unanswered. They return later, all together. > - The agent can read that silence as an outage. It then reports a blocker owned by a "Paperclip ... service" with reasonCode `external_service_unavailable`. > - The server accepts that report. The task rests blocked with no Retry. Paperclip's own stall stops the task. Our rule says that must not happen. > - This pull request rejects that blocker report one time per run. The correction tells the agent that Paperclip is reachable now and to re-check. > - The benefit is that the agent continues in the same turn and reports the real outcome. ## Linked Issues or Issue Description **What happened?** In a restart-chaos test, the server was paused (SIGSTOP) for about 2 to 5 minutes while a Codex agent saved a task document. `write_document` and `read_document` did not return during the pause. After the pause, the save had succeeded, but the agent reported a blocker: owner "Paperclip document service", reasonCode `external_service_unavailable`. The run succeeded with disposition `blocked`. The task rested blocked with `canRetry=false` and no automatic recovery. A second test (two long server holds, then a same-run resume) gave the same result. **Expected behavior** A Paperclip stall or restart must not leave a task stuck. The agent must re-check Paperclip after it is reachable and finish the task. **Steps to reproduce** 1. Start a native Codex task that saves a task document. 2. Pause the server process with SIGSTOP for about 2 minutes during the save, then resume it. 3. The agent reports a blocker owned by a Paperclip service. The task rests blocked with no Retry. **Paperclip version or commit** master at |
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eb75c9bb85 |
fix(native): resend a throttled harness backup upload instead of losing it (#20772)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - After a native run in a per-turn remote sandbox, the server saves a durable harness backup to object storage. The next run restores the provider session from it. > - On staging, two OpenCode runs had an accepted result, but `harness_state.backup.persist` failed. The run log for both says `remote checkpoint failed: Please reduce your request rate.` This is the S3 `SlowDown` (HTTP 503) answer. > - The backup and the OpenCode provider-artifact bundle were uploaded as one stream `PUT`. The S3 SDK cannot send a stream body again, and this path had no retry for a request-rate limit. One `SlowDown` lost the backup. > - The sandbox was then released. The follow-up run had no state to resume and failed with `PRP provider resume state is unavailable` (class P, see #20757). > - This pull request uploads both objects from their encrypted scratch file, as workspace snapshots already do. The existing throttled-retry path then sends them again. > - The benefit is that a short request-rate limit no longer loses the only copy of a provider session. ## Linked Issues or Issue Description Refs #20757 (the failure this causes on the next run). Refs #19917 (added the file-source upload path that this change uses). **What happened?** 1. An OpenCode run in a per-turn Daytona sandbox finished, and its result was accepted. 2. The server uploaded the encrypted harness backup with `storage.putFile` and a stream body. 3. Object storage answered `503 SlowDown` ("Please reduce your request rate."). Nothing sent the request again. 4. `harness_state.backup.persist` failed, and `native.post_result_failure` was recorded. 5. The next run for the same chat task started in a new sandbox and could not resume the provider session. **Expected behavior** A request-rate limit slows the upload down. It does not lose the backup. **Steps to reproduce** 1. Point the storage service at an S3 endpoint that answers the first `PUT` of each object with `503 SlowDown`. 2. Call `persistNativeHarnessBackup`. 3. On `master` it throws `SlowDown: Please reduce your request rate.` **Paperclip version or commit** `master` at `9574065a28`. ## What Changed - `server/src/services/native-runtime/native-harness-backup-storage.ts`: pass the encrypted scratch file as `sourceFile` to `putFile`. - `server/src/services/native-runtime/native-provider-artifacts.ts`: the same for the provider-artifact bundle. - `native-harness-backup-throttle.integration.test.ts` (new, focused file): a real S3 client against a local endpoint that throttles the first `PUT` of each object once. Cases for a Codex backup, and for an OpenCode backup with provider artifacts. Each case also throttles the first read-back of each object once. Each case checks that the backup is current and restores the provider session bytes. ## Verification - `cd server && npx vitest run src/services/native-runtime/native-harness-backup-throttle.integration.test.ts`: both cases fail on `master` with `SlowDown: Please reduce your request rate.` and pass with this change. - `cd server && npx vitest run src/services/native-runtime/native-harness-backup-storage.integration.test.ts`: 68 pass (file unchanged). - `cd server && npx tsc --noEmit -p .`: clean. - `pnpm verify`: it selected the full server suite and failed 16 of 34,997 tests, all local-environment failures unrelated to object storage: missing `.claude/skills/*/SKILL.md` files in this worktree, `ENAMETOOLONG` under the macOS temp directory, and 30 s hook timeouts under load. Required CI is the authority for that suite. ## Risks - Low. A file source also sends a `Content-MD5` header, so the backend rejects any byte it did not receive intact. Workspace snapshots have used this path since #19917. - An upload above 16 MiB now uses the file multipart path. That path has the same verified-part retry. - The read-back check (`getObject`) needs no change: a GET has no body, so the S3 client resends it after `SlowDown`. The test now also throttles the first read of each object once and proves the backup still publishes. - The Rust Runner is unchanged. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code, with tool use (shell, file edit, test execution) and read-only staging API reads. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude <noreply@anthropic.com> |
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4d141cdf64 | Carry plugin task refusals and batch project reads (#20762) | ||
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1ac8b6a711 |
fix(workspaces): stop re-saving a retained sandbox whose disk is still full (#20758)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - After a native run on a remote sandbox, Paperclip saves the sandbox workspace back to durable storage. When that save fails, saved-work recovery saves the files again from the retained sandbox, with no provider turn. > - A staging census of the last 48 hours (`doc/plans/2026-11-11-staging-failures-vs-chaos-coverage.md`, class F) found saves that failed because the sandbox disk was full. > - #20678 already ends finalization at the first full-disk copy-back and hands the work to saved-work recovery. Recovery then deletes inactive tool caches that it can prove safe, and saves again. > - When that save still found the disk full, recovery recorded a transient `export_interrupted` failure with cause `provider_error`. It then saved again on its automatic schedule (up to 5 retries in 30 minutes). Nothing frees space in a stopped, retained sandbox between those attempts, so each attempt failed the same way. The task showed "Recovering saved work…" and no Retry while this went on. > - This pull request ends the recovery generation at the first such failure with a named cause, `sandbox_disk_full`, and hands it to the board with a Retry. > - The benefit is that the task does not spend 30 minutes on saves that cannot succeed, the user sees why, and one Retry saves the files and starts one run. ## Linked Issues or Issue Description Refs #20678, #20695 (named sandbox disk-full failures for copy-back and restore) **What happened?** A native run on a remote sandbox finished, and its workspace copy-back hit a full sandbox disk. Finalization handed the task to saved-work recovery (#20678). Recovery's own save also hit the full disk. Recovery classified this as `export_interrupted` / `retry_transient` with cause `provider_error`, so it scheduled more automatic saves of the same sandbox. Each one failed the same way. The task showed "Recovering saved work…" with no Retry until the 30-minute window ran out. **Expected behavior** A save that still finds the disk full after the safe cache cleanup is not repeated automatically. The recovery ends at once with the cause `sandbox_disk_full`, and the board gets a Retry. The workspace keeps its previous saved version, and the run's unsaved files stay in the retained sandbox. One Retry saves the files once there is room and starts exactly one run. **Steps to reproduce** 1. Give a native run an accepted result whose copy-back failed (`native_workspace_sync_out_retry_exhausted`). 2. Make every save from its retained sandbox fail with `remote_workspace_sandbox_disk_full`, with no inactive tool cache to delete. 3. Run saved-work recovery. Before this change, it records `export_interrupted` with cause `provider_error` and schedules another save. ## What Changed - `workspace-recovery.ts`: a save that fails with `remote_workspace_sandbox_disk_full` after a confirmed cache cleanup (or with nothing to clean up) now fails the generation with `export_interrupted`, retry class `user_action_required`, and cause `{ label: "sandbox_disk_full", code: "ENOSPC" }`. That class is not retried automatically, and it is not a permanent-source class, so recovery never falls back to the last save and never drops the run's unsaved files. The next sweep hands the hold to the board. - A cleanup whose outcome is unknown (lost acknowledgement, interrupted journal) keeps the existing scheduled retry, because its journal resumes on the next attempt and can still free space. - `retained-provider-cache.ts`: `reclaimInactiveNativeProviderCache` returns `{ changed, confirmed }` instead of a boolean, so the caller can tell "nothing to delete" from "outcome unknown". It has one caller. - `system-recovery-state.ts`: the board handoff text for this cause says that the sandbox disk is full, that Paperclip deletes only inactive tool caches it can prove safe, and that Retry saves the files again. - New `workspace-recovery-disk-full.test.ts` covers the whole path: one failed attempt, no further automatic saves, the board handoff text, the previous saved version unchanged, the agent's files still in the sandbox, no unfinished in-sandbox capture attempt, a Retry offered in the task presentation and blocker, `POST /issues/:id/retry` accepted (202), the files saved after Retry, and exactly one run started (also with a replayed dispatch). - `doc/execution-semantics.md`: documents the behavior. ## Verification - Red on master: `cd server && npx vitest run src/services/workspace-recovery-disk-full.test.ts` fails. The recovery state is `scheduled` with cause `provider_error` instead of `exhausted` with cause `sandbox_disk_full`. - Green on this branch: the same command passes. - Related suites pass: `workspace-recovery-retry-copyback.test.ts` (79 tests, including the 8 cache-cleanup resume tests that need the scheduled retry after an unconfirmed cleanup), `system-recovery-state.test.ts`, `workspace-recovery-capture-policy.test.ts`, `workspace-recovery-fallback.test.ts`, `workspace-recovery-stop-proof.test.ts`, `native-run-finalizer-telemetry.test.ts` (167 tests in all). - `npx tsc --noEmit -p server/tsconfig.json` is clean. - `pnpm verify`: exit 2 (broader verification required), because `doc/execution-semantics.md` is a global CI input. The focused checks above pass. Required CI supplies the broad coverage. ## Risks - Low. The change touches only the saved-work recovery path when its save fails with the exact full-disk message. - Upgrade-safe: the failure code (`export_interrupted`), the retry class (`user_action_required`) and the cause label all pass the earlier release's recovery schema. An earlier release that reads this state shows its generic "Retry to try again" text. - A full-disk failure no longer gets automatic retries in its 30-minute window. If space became free by itself in that window, the user must now press Retry. Nothing in a stopped, retained sandbox frees space by itself, so this is expected to be rare. - No Runner (Rust) change, so no new sandbox image is needed. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, used through Claude Code with tool use (shell, file editing, test execution) and extended reasoning. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude <noreply@anthropic.com> |
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f25fee3532 |
fix(native): hash runner artifacts and run archive tar off the event loop (#20722)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - One server process prepares native runs, renews every controller lease on timers, and serves every request > - On a run path, the server hashed the 31 MB runner binary with `readFileSync` (more than once per run), hashed provider packs and harness backups synchronously, and ran `tar` with `execFileSync` (timeouts up to 60 s, one with no timeout) > - On a slow disk, each of these calls freezes the whole process. A 103 s stall on a hosted instance lapsed every lease. The last event before that stall was immediately before a synchronous read and hash of the runner binary (see #20694 and #20709) > - This pull request moves those reads, hashes and archive commands off the event loop. It computes the runner binary digest once per boot > - The benefit is that a slow disk delays only the run that waits for it. Turns also start faster, because the runner binary is no longer re-read for every run ## Linked Issues or Issue Description Refs #20694, #20709 **What happened?** On a hosted instance, the server process stopped for 103 s without a restart. Every controller lease lapsed, and two tasks needed a manual Retry. The last run event before the gap was immediately before `matchesControllerRunnerArtifact`, which does `createHash("sha256").update(readFileSync(controllerRunnerBinary))`. Four workspace restores were running at the same time, and file I/O was very slow (a 43 s archive hash, 20 s snapshot decrypts). The trigger is not proven. But each synchronous call below blocks the event loop for as long as the disk is slow. **Expected behavior** File hashing and archive commands on a run path must not block the event loop. A slow disk must delay only the run that waits for it. **Steps to reproduce** 1. Make a remote runner binary slow to read (the test uses a FIFO whose writer waits), or make `tar` slow (the test puts a `tar` wrapper that sleeps first on `PATH`). 2. Call `resolveRemotePaperclipRunnerBinary`, `stageRemoteRunnerDirectory`, or `syncRemoteRunnerDirectoryOut` while a 10 ms timer runs. 3. Before this change, the timer stops for the whole slow step (814 ms, 1,764 ms and 3,379 ms). After this change, it keeps firing. ## What Changed - `server/src/services/native-runtime/off-loop-file-work.ts` (new): - `sha256FileStreamed` - `cachedFileSha256`: a streamed digest, reused while the file's device, inode, size, mtime and ctime do not change - `binaryTargetFromHeader`: reads 64 KiB; reads the rest of the file only when the header cannot answer, so the result equals `runnerBinaryTarget(readFileSync(path))` - `sha256DirectoryTreeStreamed` - `execFileBuffered`: `execFile` with stdin input, `maxBuffer`, `timeout` and `env`. It rejects on a non-zero exit, a timeout or a `maxBuffer` overflow, like `execFileSync`. - `native-session-executor.ts`: - `matchesControllerRunnerArtifact` uses `cachedFileSha256`. Each boot reads the binary once, not once or twice for every run. - The remote Claude daemon target is read from the binary header. - The bundled remote runner binary is checked by `verifiedBundledRemoteRunnerBinary`: the same checks and errors, with a cached digest. - Provider-pack upload verification uses the new `verifyRemoteProviderPackManifest`. It runs the same checks, in the same order, with the same errors. One generator drives both the sync and the streamed readers. - Harness backup build and verify on run paths use streamed digests (`buildNativeHarnessBackupManifestStreamed`, `verifyNativeHarnessBackupStreamed`). The digest format does not change. - `stageRemoteRunnerDirectory` (3 calls), `assertSafeRemoteCheckpointArchive` (3 calls) and the checkpoint extract use `execFileBuffered`, with the same arguments, timeouts and buffer limits. `stageRemoteRunnerFile` uses `readFile`. - `packages/paperclip-runner/src/live/runner-binary.ts`: the default daemon lookup (`resolvePackagedRunnerBinary`, used by the local and remote resolvers) classifies the daemon with `runnerBinaryFileTarget`. It reads the 64 KiB header, not the whole file. - `packages/paperclip-runner/src/live/bundled-remote-provider-pack.ts`: the release-manifest checks now live in one helper, `bundledRemoteRunnerRelease`. The sync `bundledRemoteRunnerBinary` and the server's streamed check both use it. - `native-codex-runner.ts`: - `resolveRemotePaperclipRunnerBinary` reads only the header. - The local `runnerDigest` uses `cachedFileSha256`. - New `verifiedBundledRemoteRunnerBinary`. **Ordering and atomicity.** I checked each converted call for code that relied on the sync call being atomic with respect to other runs: - **Checkpoint copy-back.** It extracts into a private `mkdtemp` directory. The replace sequence (`existsSync`, `rename`, `rename`, `rm`) stays synchronous, so no other run can see a half-installed checkpoint. This function already awaited a remote command before the extract, so this change adds no new interleaving with the target. - **Harness backup verify then restore.** The verify was sync, but the restore after it was already async. The window between them existed before. One owner serializes the turns of a session, so no other turn publishes a backup for that session while a turn verifies it. - **Staging and provider-pack hashing.** These read build-owned, immutable trees, or the private staging copies of a run. ## Verification - Red/green: `pnpm --filter @paperclipai/server exec vitest run src/services/native-runtime/off-loop-file-work.test.ts` - With `native-session-executor.ts` and `native-codex-runner.ts` from `origin/master`: 3 failed. The longest timer gaps were 814 ms (runner binary target read), 1,764 ms (directory staging tar) and 3,379 ms (checkpoint list, size check and extract). - With this change: 6 passed. The gaps stay under 400 ms. The same file also checks the digest cache, the header fallback, and the `execFileSync`-like errors (exit code, timeout kill, `ERR_CHILD_PROCESS_STDIO_MAXBUFFER`). - `native-session-executor.test.ts`: - The streamed provider-pack verifier returns the same manifest as the sync reader, and rejects a changed asset tree with the same error. - The streamed harness backup manifest equals the sync one. - The streamed verify agrees with the sync verify, for a valid backup and for a corrupt one. - Run together: `native-session-executor`, `off-loop-file-work`, `native-codex-runner`, `setup-readiness`, `antigravity-connection-probe` (1,653 passed). `run-completion.test.ts` passed all 153 tests. Its `afterAll` embedded-Postgres cleanup timed out locally, which is not related to this change; CI runs it. - `pnpm --filter @paperclipai/server exec tsc --noEmit` passes. ## Risks - **Turn start.** This change adds no wait before `turn.start`; it removes work. The first run of a boot streams the runner binary once. Later runs reuse the digest after one `stat`. - **Cache staleness.** The cache keys on device, inode, size, mtime and ctime. An in-place rewrite changes mtime and ctime, and a replaced file changes its inode, so a changed binary is hashed again. - **stderr.** `execFileSync` wrote a child's stderr to the server's stderr. `execFileBuffered` captures it. Tar warnings no longer appear in server logs; errors and exit codes are unchanged. - **Persisted state.** No persisted shape changes. Old saved state and new code (and the reverse) read the same manifests and digests. - **Not converted in this PR:** small metadata syscalls (`existsSync`, `lstatSync`, `readdirSync`, small JSON reads and writes, renames) in the native state machines. Some of these rely on running synchronously. Also not converted: the sync harness backup verify inside the sync restart-authority checks, and the sync stamp verify in `native-harness-backup-storage.ts`. Both are listed for a follow-up. ## Model Used - Anthropic Claude Opus 5.5 (`claude-opus-5-5`), used through Claude Code with tool use, shell, and code execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes (code comments carry the contract) - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude <noreply@anthropic.com> |
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94c7c83ce8 |
fix(runner): refuse a moved-root same-session checkpoint by name (#20723)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Native runs on a remote sandbox resume a task's provider session from a saved checkpoint > - #20712 made a checkpoint that names an abandoned remote workspace root decline recovery, so a replacement session opens in the new root > - A checkpoint that requires the same session (an unfinished goal, `same_session_only`) cannot be replaced. It then failed with the generic `native_session_recovery_failed`, which recovery treats as a retryable interruption > - A retry cannot move a saved session to another root, so the failure repeats. The upgrade-safe rule requires a permanent, named code for this case > - Also, the working-directory errors said "Codex" on Claude and other ACPX runs, because one app-server driver serves all of them > - This pull request reports the moved root as provider state that is incompatible, and makes the errors name the agent generically > - The benefit is a named, permanent refusal with a working board Retry, and error text that is correct for every agent ## Linked Issues or Issue Description Refs #20712 **What happened?** After #20712, a `same_session_only` checkpoint with a moved remote root ended with `native_session_recovery_failed: persisted session working directory is not the assigned remote workspace`. That is not a named permanent code, so recovery could retry a run that cannot succeed. On ACPX Claude runs, path errors read "Remote Codex working directory ...". **Expected behavior** The run ends with the permanent code `native_provider_state_incompatible`. Automatic retries stop. A board Retry continues the task in a fresh provider session in the same workspace. Errors do not name Codex on other agents. **Steps to reproduce** 1. Save a native checkpoint with `providerRecoveryPolicy: same_session_only` under one remote workspace root. 2. Assign the run a different sibling root (the epoch was abandoned). 3. Resume the run. ## What Changed - `codex-app-server-driver-impl.ts`: the moved-root decline from #20712 now carries `failureClass: provider_state_incompatible`. The runtime already maps that class: - checkpoint allows replacement (`allow_replacement_after_resume_failure`): a replacement session opens in the assigned root, as before; - checkpoint requires the same session: `NativeProviderStateIncompatibleError`, code `native_provider_state_incompatible`. - The server already treats `native_provider_state_incompatible` as a permanent failure (no automatic retry, board action text "Retry the task to continue in a fresh provider session with the same workspace"). `rebindNativeSessionCheckpoint` returns no checkpoint after that code, so a board Retry starts a fresh session in the same workspace. No server change is needed. - A moved-root checkpoint with an active turn or a pending runtime request now reports `provider_side_effect_pending`. The runtime never replaces it under any policy, and the run ends with the permanent code `native_provider_side_effect_pending` for an operator to reconcile. Before, it threw the working-directory refusal, which recovery recorded as the retryable `native_session_interrupted`. - `harness-driver.ts`: the `PROVIDER_STATE_INCOMPATIBLE` doc now names the moved-workspace case. - `codex-boundaries.ts`: working-directory errors say "Agent working directory", "Remote agent working directory" and "Provider thread response" instead of "Codex". Tests updated to the new text. - Tests: - `native-session-runtime.test.ts`: the real app-server backend with `remote_runner` authority and a moved root, for each recovery policy. Same-session policies end with `native_provider_state_incompatible`, the replacement policy opens a replacement in the assigned root, an in-flight turn ends with `native_provider_side_effect_pending` under every policy, and no transport starts. - `native-backend-factory.test.ts`: the decline carries the failure class, and an ACPX Claude refusal reads "Remote agent working directory does not match the assigned workspace". Previous-release story: no persisted shape changes. Saved checkpoints are classified at recovery time. A saved same-session checkpoint under an old root now ends with the named permanent code instead of a generic one. ## Verification - Red: without the failure classes, the same-session and in-flight runtime cases fail (generic `native_session_recovery_failed`). Before the rename, the ACPX Claude message test fails. - Green: `cd packages/paperclip-runner && npx vitest run src/backends src/drivers/codex src/live/runner-prepared-launch-workspace.test.ts src/native-session-runtime.test.ts` passes (784 tests). - `npx tsc --noEmit -p packages/paperclip-runner` passes. - Existing server coverage for the code: `native-session-resume.test.ts` (no rebind after `native_provider_state_incompatible`) and `native-session-executor.test.ts` (source-code mapping). ## Risks - Low. Error message text changes. A search found no code that matches on the old text outside the updated tests. - Same-session checkpoints with a moved root now stop for a board Retry instead of a generic interruption. That is the intended behavior: a retry cannot succeed. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, used through Claude Code with tool use (shell, file edit, test execution). ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude <noreply@anthropic.com> |
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08ff0828d6 |
fix(native): offer Retry at once when the Runner refuses a turn start on a closed session (#20729)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - A native ACPX run (for example Claude) starts each turn with `turn.start`. When a start is cut off, the Runner reads the sidecar's dispatch journal (#20675). > - If the prompt never left, the Runner keeps the session reopenable, and the same-run resume sends the prompt once. If the prompt may have left, the Runner closes the session, because a resend could duplicate it. > - A closed session cannot reopen for the same run. Every same-run resume got `ACPX session is not open`. The server treated that as a generic interruption and spent three attempts (about 95 s) before the board offered Retry. > - This pull request gives that refusal a closed class in the Runner and a permanent, named failure code in the server. > - The benefit is that the board offers a working Retry on the first refusal, while every recoverable case keeps recovering by itself. ## Linked Issues or Issue Description **What happened?** Restart-chaos wave `w-20261111T011704-s9107`, task t05 (local, claude, workload C1, fault TM2). A freeze cut off a turn start, and the Runner saved the session `closed`. Three same-run resumes each failed with `PRP command turn.start failed: … "message":"ACPX session is not open"`. Recovery stopped with `native_session_retry_exhausted` at 01:25:14, and the board then offered Retry. The Retry run succeeded. **Expected behavior** When the Runner proves the session is closed for this run, the run stops at the first refusal with a named failure, and the board offers a Retry that works. A start that the Runner proved never reached the provider still recovers by itself. **Steps to reproduce** 1. `cd server && npx vitest run src/services/native-runtime/native-closed-session-retry.integration.test.ts` 2. On master, "offers Retry on the first refusal, and Retry starts a new run" fails: the coordinator is `retryable_failure` / `native_session_interrupted` (a same-run retry in 30 s). Refs #20675, #20720 ## What Changed - Runner (`durable/mod.rs`, `acpx_provider_backend.rs`): new closed class `provider_session_closed`. The Runner sets it on these refusals: - a turn start that saves the session `closed` (`ACPX turn start failed closed: …`), but not the rejected-checkpoint case, which stays `prepared` and reopens; - `ACPX session is not open` when the saved lifecycle is `closed` for this run; - the saved turn-end-restart refusal for this run (asserted in `acpx_turn_end_restart`). A session that waits for provider-exit proof can reopen after a restart. Its refusal gets no class. - Server (`native-session-executor.ts`): a `turn.start` failure with that class maps to the new permanent code `native_provider_session_closed`. The server reads the class from the authenticated command result, and from the command-failure text if the error was rewrapped. `nativeSessionFailureDisposition` treats the code as permanent, so the first refusal ends the run as `terminal_failure` with a board owner and a plain next action. - Docs: `packages/paperclip-runner/docs/durable-recovery.md` states the class and the older-Runner behavior. - Tests: - `native-closed-session-retry.integration.test.ts` (new, embedded Postgres) drives `executePaperclipNativeSession` with the Runner refusal. On the first refusal, the board shows `canRetry: true`. `requestTaskRetry` is accepted, and `resumeTaskRetry` starts exactly one new run with a fresh provider session. A start proved undispatched stays `retryable_failure`. - Unit tests in `native-session-executor.test.ts`: both closed refusals, a rewrapped error, an undispatched start, an unclassified older-Runner refusal, and a class on another command. - Rust `acpx_cut_turn_start`: a start cut off before dispatch has no class. A start cut off after dispatch, and the later refusal, carry `provider_session_closed`. ## Verification - Red on master, green here: step 1 above. - `npx vitest run src/services/native-runtime/native-session-executor.test.ts`: 1358/1358 pass. - `cargo test -p paperclip-runner-core --test acpx_park_preparation` (26 pass), `--lib acpx` (94 pass), `--test acpx_provider_turns --test acpx_provider_session --test acpx_warm_attachment` (all pass), `cargo fmt --check` clean. - `npx tsc --noEmit -p server/tsconfig.json`: clean. - Not run: a chaos wave. ## Risks - This changes the Rust Runner. Daytona needs a new runner image before remote runs get the class. Until then, an older Runner sends the refusal without the class, and the server keeps today's bounded same-run retries. That path is unchanged and ends with a working Retry. The server does not trust the text alone, because an older Runner sends the same text for a session that can still reopen. - The class is set only where the Runner's saved state proves that no later start of this run can reopen the session. A false class would cost one automatic resume and show Retry earlier. It never replays provider work. - No persisted shape changes. The class is an optional field of a failed command result. Old saved state resumes unchanged. Nothing new runs before `turn.start`. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - Claude (Anthropic), model ID `claude-opus-5-5`, run in Claude Code with tool use (shell, file edit) and extended reasoning. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude <noreply@anthropic.com> |
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16024ffa2a |
fix(native): a same-boot stall never leaves a run waiting on itself (#20721)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Native runs keep an execution lease. Restart recovery takes over a run only when it can prove that the recorded controller stopped. > - A stall (SIGSTOP) longer than the lease, with no restart, makes the executor lose its own lease. The executor then detaches for "the next controller" and exits. > - The next controller is this same process. Recovery asks the PID probe if the recorded controller is alive. The recorded controller is this process, so the answer is always "alive". > - The task then waits forever: `in_progress`, no Retry, an active run, and an active environment lease. > - A second gap: after back-to-back stalls mid-tool, the executor returns and nothing in this process ever looks at the run again. No terminal state, no recovery and no Retry. > - This pull request lets recovery recognise its own process. When this process no longer drives the run and its own lease lapsed, the prior owner is gone. The existing evidence checks then decide, as for any stopped controller. > - It also makes heartbeat schedule that recovery as soon as such an executor exits. > - The benefit is that a same-boot stall never needs a manual Retry. When provider work may have started, the run fails with a working Retry instead of a wait with no end. ## Linked Issues or Issue Description Refs #20694 (the same class of fix for legacy `preparing` runs), #20529, #20691. **What happened?** Chaos wave `w-20261111T034105-s9330`, task t02 (Daytona, OpenCode, fault TM1). The server process was frozen with SIGSTOP for about 84 s while run `89a3922b` prepared. After SIGCONT, `native.process_start_requested` was recorded and `native.session.execute` failed after 118 ms: the lease renewal found the lease lapsed, and the executor detached and exited. From then on, recovery recorded `native.recovery.transition` "waiting for safe ownership evidence" with reason `controller_still_alive` every 30 s for more than 20 minutes. The run stayed `running`, the issue stayed `in_progress`, no Retry was shown, and the environment lease stayed `active`. Chaos wave `w-20261111T040439-s9331` (Daytona, codex/claude/opencode, T1, TM1). Three stalls of about 90 s came back to back, with less than 1 s between them. Each run was in a tool call. After the second thaw, `native.session.execute` failed for all three runs (lease lost, executor detached). After that, no run had any event: no terminal state, no `native.recovery.transition` and no Retry, for 20 minutes. The in-sandbox turns kept going. A single 90 s stall (wave s9340) stays green, because a later recovery signal happens to find the run. With stacked stalls, that signal can land while the executor is still tearing down, so it skips the run and sets no deadline. **Expected behavior** When this process no longer drives a run that it recorded as its own, recovery takes the run back. No turn reached the runner here, so the bootstrap restarts on the same run. When a turn or runner work may have started, the run fails and shows a working Retry. **Steps to reproduce** 1. Start a native remote (Daytona) run. 2. Send SIGSTOP to the server during preparation, and hold it longer than the execution lease. 3. Send SIGCONT. The executor loses its lease, detaches and exits. 4. See that every recovery scan waits with `controller_still_alive`, and the run never settles. The new tests in `native-runner-restart-recovery.integration.test.ts` ("same-boot controller whose own lease lapsed") reproduce this at the recovery layer. ## What Changed - `claimNativeRestartRecoveries`: when the recorded controller is this exact process (same boot ID and PID): - If this process still drives the run (heartbeat execution or native executor registered), recovery leaves the run to it (`current_controller_preparing`). - If neither drives it and the self lease lapsed, the takeover is allowed (`current_controller_released`). The existing evidence checks then choose the outcome: bootstrap again on the same run when a durable record proves no command reached the runner, or fail with a Retry (`blocked`) when runner or provider work may have started. - An unexpired self lease still waits. A claim that has not reached its executor holds it, and it lapses by itself. - A run that this process handed to the next server (graceful drain `restart_suspended` record, or the in-process hot-restart handoff marker) stays with the next server. - `heartbeat.ts`: when the executor ends with `NativeControllerDetachedForRestartError`, there was no shutdown or hot-restart handoff, and this process's own lease lapsed (`ownNativeExecutionLeaseLapsed`), heartbeat schedules restart recovery for the run when the executor exits. Recovery then reattaches the remote runner whose turn is still running, restarts an unstarted bootstrap, or fails the run with a working Retry. - `claimNativeRestartRecoveries`: a self-owned lease that is still live, with no driver here, now returns a `retryAt` at its expiry, so the wait is bounded. - `heartbeat/shutdown-handoff.ts`: add `isRunHandedOffForShutdown`. Heartbeat recovery passes it to the claim. - `suspendedByCleanDrain` now uses the shared `handedToNextControllerSinceClaim` helper. Behavior is the same. - Heartbeat test: an executor detaches after its own lease lapsed, with no restart. The same process must take the run back. Red before (timed out, the run stayed `running`), green after. - Tests: five cases for the same-boot lapsed lease: bootstrap again with no runner command; fail with a working Retry when a runner identity was recorded; leave the run to a live in-process executor; leave a handed-off run to the next server; still wait for a different live controller. ## Verification - Red before the fix: the three same-boot cases returned `awaiting_evidence` / `controller_still_alive`. - Green after the fix: - `pnpm --dir server exec vitest run src/services/native-runtime/native-runner-restart-recovery.integration.test.ts src/services/native-runtime/native-restart-recovery.test.ts src/__tests__/heartbeat-native-restart-suspension.test.ts` - Daytona wave `w-20261111T050504-s9331` from this branch (same seed and shape as s9331: 3 tasks, concurrency 3, three 90 s TM1 stalls with about 1 s between them). All 3 tasks reached `done` with no Retry. Run `632f0564` (claude) shows the exact s9331 sequence: `native.session.execute` failed after 216 s, then `reattach_remote_runner` 0.4 s later (before the third stall), then a second reattach after it, and the turn completed. Two tasks are graded FAIL only on the T1 crossing check: their own fault landed after their tool loop ended (for example loop ended 05:11:26, fault 05:11:44). Their status is `done`, with no Retry. - `tsc --noEmit -p server` is clean. ## Risks - A same-process recovery scan can now claim a run that this process recorded as its own. The guard needs all of these: the self lease lapsed, no in-process execution of the run, and no handoff to the next server. A claim that is still on its way to its executor holds a live lease, so it is not taken twice. - Upgrade safety: the decision uses only the coordinator row and in-process state. Old saved rows are judged by the same rules. A new process never matches an old boot ID, so deploys keep the existing proof path. - No new waits or file operations run before `turn.start`. - There is still no ceiling on `awaiting_evidence` for a genuinely different live controller (case c). This PR does not change that policy. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), via Claude Code, with tool use (shell, file edit) and extended reasoning. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude <noreply@anthropic.com> |
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200c6e40e2 |
fix(native): restart a bootstrap whose Runner suspended before the provider opened (#20691)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - When a native run's first provider start fails before any session opens, Paperclip retries the bootstrap on the same run. Durable controller evidence proves that no provider session or provider event exists. > - A remote sandbox keeps the Runner state inside the workspace. A replacement sandbox gets that state back when the saved workspace is restored. > - When the provider refused `session.open` (for example an Anthropic 429), the Runner still suspended cleanly. Its state says `suspended`, but the provider state has no session identity. > - The same-run restart handled a Runner that never suspended. It did not handle a Runner that suspended before the provider opened a session. It failed with `runner_harness_state_mismatch: provider_identity_incomplete (provider_not_suspended)`, and the task showed "Recovery needed" without Retry. > - This pull request lets that proven restart set the unopened session aside and start the provider again. > - The benefit is that a rate-limited provider start continues by itself after the limit resets. ## Linked Issues or Issue Description Refs #20627 and #20683 (other restore paths). This PR changes only the same-run bootstrap restart. **What happened?** Two ACPX Claude tasks on remote Daytona sandboxes, on staging: 1. The first attempt sent `session.open`. ACPX rejected it with `classification=provider_rate_limit` (Anthropic 429). The Runner exited with `lifecycle=suspended`. 2. Paperclip recorded `recoveryMode: bootstrap_retry`, `providerSessionEstablished: false`, `providerEventsExist: false`, and a retry after the limit reset. 3. One hour later the retry ran as `bootstrap_incomplete` on the same run, in a new sandbox with the saved workspace restored. 4. Host preparation inspected the restored Runner state. The Runner was `suspended`, but the provider had no session identity. The inspection threw `provider_identity_incomplete (provider_not_suspended)` before the bootstrap restart branch ran. 5. The run failed. The task stopped at "Recovery needed" with only inspect actions. **Expected behavior** The restart sets the unopened session aside and opens a new provider session, as it already does for a Runner that never suspended. **Steps to reproduce** 1. Restart a remote run as `bootstrap_incomplete` with a proven bootstrap restart. 2. Give the sandbox a Runner state for this run with `lifecycle: suspended` and a provider state with no session identity. 3. Prepare the host. On `master` it throws `runner_harness_state_mismatch: provider_identity_incomplete`. The new `interrupted_bootstrap_unopened` cases of `bootstraps only an untouched provider session in a $outcome workspace lease` run these steps for a created and a resumed lease. **Paperclip version or commit** `master` at `7435abcc63`. ## What Changed - During host preparation, a Runner state that is suspended with no provider session identity returns the new incomplete reason `provider_unopened`, but only when all of these hold: - the run is restarting as `bootstrap_incomplete`; - the state belongs to this same run; - the controller already recorded the bootstrap restart proof (its durable journal shows no provider turn, and the old Runner is stopped or absent). - the provider state is the one saved before any session opened (`remoteProviderStateNeverOpened`): `prepared`, no session or identity, no turn in progress, no unconfirmed exit. Only ACPX and Codex-family states qualify. - The created-lease and resumed-lease restart branches share one check (`restartableBootstrapState`) and accept `provider_unopened` exactly like `not_suspended`. They move the old session aside and claim a new, untouched session root. - Every other case still throws `provider_identity_incomplete`: another run's state, a restart without the proof, a normal resume, and close checkpointing. ## Verification - `pnpm --filter @paperclipai/server exec vitest run src/services/native-runtime/native-session-executor.test.ts -t "bootstraps only an untouched provider session"`: 47 passed. - Red on `master`: the `created` and `resumed` `interrupted_bootstrap_unopened` cases fail with `runner_harness_state_mismatch: provider_identity_incomplete (identity_binding)`. Green with this change. - Fail-closed cases stay red-proof: `interrupted_bootstrap_unopened_unproven` (no restart proof) and `interrupted_bootstrap_unopened_other_run` (another run's state) still throw. - Full `native-session-executor.test.ts` and `pnpm --filter @paperclipai/server typecheck` pass. ## Risks - Low risk. The new branch needs the same proof that already authorizes a fresh bootstrap for a Runner that never suspended. The proof comes from the controller's durable journal, not from the sandbox. - The normal path is unchanged and has no added wait. - Not proven live: I did not confirm on staging that the controller recorded the restart proof for these runs. If it did not, the run still fails closed as before. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, with tool use and code execution in Claude Code. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude <noreply@anthropic.com> |
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a46b9ac724 |
fix(native): wait out an ACP usage limit's reported reset, then Retry the task (#20692)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work
> - Native runs (Paperclip Runner with an ACP harness, such as Claude)
can stop because the provider account runs out of its usage allowance
> - The ACP harness reports this as a "terminal limit failure".
Paperclip blocked the task behind a board hold that called the session
state ambiguous, and the only way forward was a manual Retry
> - The provider also says when the limit resets, for example "resets
Nov 12, 6pm (UTC)" for a weekly limit. Paperclip read only clock-only
resets ("resets 2am"), so the agent-level wait fell back to one hour.
Each later wake for the agent then hit the limit again and blocked
another task
> - This pull request reads calendar resets, says on the hold when the
limit resets, and requests the task's Retry itself at that time when the
reset is reported and bounded
> - The benefit is that a usage limit no longer needs a person to click
Retry, and the agent's other tasks wait instead of failing one by one
## Linked Issues or Issue Description
**What happened?**
A native ACP run failed with `native_provider_usage_limit` ("ACP agent
reported a terminal limit failure. You've hit your weekly limit · resets
Nov 12, 6pm (UTC)"). The task went to `blocked` with a board-owned hold.
The hold said "Inspect the original provider failure and explicitly
resolve the ambiguous session state". Nothing resumed the task after the
reset. The agent-level `provider_limit_wait` recorded "no reset time was
reported, so Paperclip waits one hour", so every hour another wake
dispatched, hit the limit, and blocked another task. In one 48-hour
window on a staging instance, this blocked 7 tasks for one agent.
**What did you expect?**
When the provider reports a bounded reset, the task waits and continues
after the reset, like the existing `provider_limit_wait` path. When the
reset is unknown, the task fails with a clear message and a working
Retry.
**Steps to reproduce**
1. Run a native ACP agent until its provider reports a weekly or session
limit with a reset time.
2. Look at the task: it is blocked with an "ambiguous session state"
hold.
3. Wait past the reported reset: the task stays blocked until a person
clicks Retry.
Refs #20666 (other recovery work in the same staging census; not changed
here)
## What Changed
- `provider-quota-reset.ts`: parse calendar resets such as "resets Nov
12, 6pm (UTC)", "resets Jul 17th at 4:30 PM (America/Chicago)" and
"Resets on August 2, 9am (UTC)". A past date rolls into next year. An
impossible date (Nov 31) is refused. Clock-only parsing is unchanged.
This also fixes the agent-level `provider_limit_wait` reset and the
legacy `provider_quota` reset for these messages.
- New `native-runtime/provider-limit-resume.ts`:
- `readNativeUsageLimitReset` reads the reset only from the run's own
durable events. The last turn event must be a provider-observed
`turn.failed` with a `rate_limit` or `quota_exhausted` provider failure,
and the reset must be at most eight days out.
- `requestProviderLimitResumeRetry` asks for the task's Retry
(`requestTaskRetry`, `initiatedBy: "provider_limit_reset"`) on behalf of
the user who requested the run, or the run's accountable user for
automatic wakes. It is idempotent per run and records its outcome on the
hold. At most three automatic Retries follow one another without a
successful run.
- `registerProviderLimitResumeWork` is a scoped deadline owner (shared
work scheduler, no polling). Each active usage-limit hold is due at its
reset. Startup rebuilds it from the holds, and the executor notifies it
in the hold's transaction.
- `native-session-executor.ts`: for a terminal usage limit, the hold and
run failure detail say when the limit resets and whether Paperclip
retries then, instead of "ambiguous session state". The evidence records
`providerLimitResetAt`.
- `task-retry.ts`: accept `initiatedBy: "provider_limit_reset"`. Its
activity is recorded as system actor `provider-limit-reset` on behalf of
the user, like `restart_recovery`.
- `doc/execution-semantics.md`: document the wait and its limits.
Previous-release story: holds saved by the previous release carry
forward. At startup the owner reads each active
`native_provider_usage_limit` hold. It rewrites the hold's message with
the reset when the reset is known and still ahead, and it requests the
Retry at the reset. Holds whose reset is unknown, more than a day in the
past, or that have no accountable user keep their Retry and are recorded
as not requested, so they are not read again.
## Verification
- `npx vitest run server/src/services/provider-quota-reset.test.ts` — 4
tests. Three fail on `origin/master` code (calendar resets return
`null`), all pass with this change.
- `npx vitest run
server/src/services/native-runtime/native-provider-capacity.integration.test.ts`
— 5 tests on embedded Postgres:
- the existing usage-terminal test (both replay modes) still blocks with
a Retry, and no automatic Retry is requested without a reported reset;
- "waits for a reported usage-limit reset and then requests the task's
Retry once": the hold says when the limit resets, an old-release hold is
rewritten, nothing starts before the reset, one Retry receipt is created
for the accountable user at the reset, and a second pass does nothing.
Fails on `origin/master` executor code;
- "starts the Retry from the hold's own deadline": a real delivery
coordinator rebuilds the deadline from the hold and calls Retry dispatch
once, after the reset;
- "leaves a visible Retry when no user is accountable for the run".
Fails on `origin/master` executor code.
- Focused regression suites pass (642 tests): `task-retry`,
`quarantined-task-retry`, `heartbeat-native-restart-suspension`,
`native-startup-retry.integration`, `provider-failure-classification`,
`heartbeat-provider-limit-wait`, `deferred-execution-receipt-work`,
`chat-run-publications`, `native-runner-restart-recovery.integration`,
`native-remote-retry-admission`.
- `pnpm --filter @paperclipai/server exec tsc --noEmit` passes.
- `pnpm verify` selected a broad run (exit 2, because the docs file is a
global CI input). CI supplies the broad coverage.
## Risks
- The automatic Retry uses the accountable user's authority for
automatic (system) wakes. It is the same Retry the hold already offered
that user, and dispatch still checks Retry authority, stop proof, saved
work and action reconciliation. It is never broader than a click.
- A provider that keeps reporting resets that do not restore capacity
gets at most three automatic Retries in a row; then the Retry stays
visible.
- The deadline owner reads all active usage-limit holds at startup
(limit 500 rows). The number of such holds is small.
- Not changed: the agent-level wait still holds new wakes for at most
one day, as before.
## Model Used
- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with
tool use (shell, file edits, read-only staging API reads). Extended
reasoning enabled.
## Checklist
- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge
🤖 Generated with [Claude Code](https://claude.com/claude-code)
---------
Co-authored-by: Claude <noreply@anthropic.com>
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a1ec05a1a4 |
fix(native): read settled harness state again after a dropped sandbox connection (#20690)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Native Runner keeps one provider conversation across the per-turn runs of a task. After each turn, the controller reads the settled Runner and provider state out of the sandbox and saves it as the harness backup. > - A per-turn sandbox is released after the turn. The harness backup is then the only copy of the provider session. > - On staging, one dropped sandbox connection (`write ECONNRESET`) during that read lost the backup. The run itself succeeded, because its result was already accepted. > - The next run of the task could not resume the conversation: `PRP provider resume state is unavailable`. When the task was waiting for a reply, the run stopped at "Recovery needed" with no Retry. A person had to send a message to start a new conversation. > - This pull request reads the settled state again when the sandbox connection drops during that read. > - The benefit is that one network reset no longer loses a task's conversation. ## Linked Issues or Issue Description Refs #20627 (warm backup restore when the source sandbox is idle) and #20683 (relaunch of a settled runner). This PR changes a different step: the backup capture at the end of a turn. **What happened?** A per-turn OpenCode task ran on a remote Daytona sandbox with reuse disabled. 1. Run A accepted its result. The Runner suspended. 2. The controller read the settled state out of the sandbox. The read failed with `remote checkpoint failed: write ECONNRESET`. `harness_state.backup.persist` and `session.checkpoint.persist` failed. 3. Run A still finished as `succeeded`, because the result was durable. The sandbox was released. No harness backup of turn A existed. 4. Run B started in a new sandbox. It failed in 0.2 s with `native_session_recovery_failed: Error: PRP provider resume state is unavailable`. When the prior turn yielded for a reply, the checkpoint policy does not allow a replacement session, so the task showed "Recovery needed" with only inspect actions. On staging this happened on 4 tasks in 48 hours. In all 3 predecessor runs that I could inspect, the backup capture failed. 2 of them show the `ECONNRESET` in the run log. No deploy happened between run A and run B in one case, so a deploy is not the cause. **Expected behavior** A transient connection drop while reading settled state does not lose the provider conversation. The read is repeated, and the backup is saved. **Steps to reproduce** 1. Run the first durable turn of a remote OpenCode session. 2. Make the sandbox `syncOut` of the backup directories fail once with `ECONNRESET`. 3. Call the settled checkpoint. On `master` it throws `write ECONNRESET`, and no backup is saved. The new test `uses the bundled Linux image authority for remote opencode-new-durable-reset without controller overrides` runs these steps. **Paperclip version or commit** `master` at `7435abcc63`. ## What Changed - The settled-state capture (inspect plus `syncOut` of each persistence directory into a pending directory) is now one step that can repeat. The step writes nothing durable, so it is safe to repeat. - A dropped, reset or refused sandbox connection repeats the step, at most 3 attempts, with 1 s and 2 s delays. Each repeat clears the pending directory and inspects the live state again, so the copy always matches the inspected identity. - Any other failure fails at once, as before: a state mismatch, a missing directory, an unsafe archive, or a TLS failure. - The durable backup upload and the local publish run only after a complete capture. They did not change. - `isTransientRemoteCheckpointReadFailure` classifies the error with the existing `classifyRemoteConnectionError`, plus a message match for SDK errors that lose their `code`. - The first completeness inspection and its visibility-window re-reads use the same bounded retry (`retryTransientRemoteCheckpointRead`). A dropped provider-state read keeps its `provider_state_unreadable` refusal for every other caller, but the checkpoint retry looks through it to the dropped read. Undici `fetch failed` and `no response returned` also count as drops. ## Verification - `pnpm --filter @paperclipai/server exec vitest run src/services/native-runtime/native-session-executor.test.ts`: 1343 passed. - Red on `master`: the new `opencode-new-durable-reset` case fails with `Error: write ECONNRESET`. Green with this change. - The `isTransientRemoteCheckpointReadFailure` test checks that state mismatches, unsafe archives and TLS failures do not repeat. - `pnpm --filter @paperclipai/server typecheck` passes. ## Risks - Low risk. The normal path has no added wait. A repeat adds at most 3 s, and only after a connection failure. - A repeated read inspects the live state again. If the state changed between attempts, the existing identity checks still refuse it. - A connection that stays down for all 3 attempts fails the same way as before. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, with tool use and code execution in Claude Code. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude <noreply@anthropic.com> |
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06af074452 |
fix(native): deliver the retry after a failed native turn, once per chain (#20681)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The native runtime decides a task's next status after each run, through the status arbiter and the status-decision committer > - When a native turn fails without a classified provider error, the arbiter keeps the task's status and asks for one retry (`schedule_retry`) > - The native-status wake dispatcher refused that retry wake, because its provenance check accepted only `enqueue_continuation` effects > - So the task stayed `in_progress` with no live run, no queued wake and no visible cause, until a person noticed it > - This pull request lets the dispatcher accept the committed retry effect, keeps the retry on its chat route, and limits the automatic continuation to one per chain > - The benefit is that a failed turn always ends with either queued work or a blocked task with a working Retry ## Linked Issues or Issue Description **What happened?** A native run that ends with a failed turn and no classified provider error leaves its task stranded. Examples: an OpenCode server that the sandbox killed with SIGKILL during a turn (`opencode_server_exited`), or an OpenCode turn that ended without an answer (`opencode_empty_response`). The run's accepted result is finalized as `run_failed_partial_evidence_preserved`. The committer queues a `schedule_retry` wake. The dispatcher then skips the wake with `chat_control_recovery_proof_unresolved`. The task stays `in_progress` with no run, no wake and no blocker. **Steps to reproduce** 1. Run a native task. Make the provider turn fail with `opencode_server_exited` or `opencode_empty_response` and an accepted `needs_review` result. 2. Finalize the run. 3. Run the native-status wake dispatcher. 4. See that the retry wake and its dispatch receipt are `skipped`, and that no run starts. **Expected behavior** The task gets its automatic continuation. If that continuation fails the same way, the task is blocked with a clear board blocker and a Retry that starts a new run. **Paperclip version or commit** `origin/master` at |
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7435abcc63 |
fix(native): wait out a run-event append before saving provider-pack admission (#20682)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - A native OpenCode run in a remote sandbox records a provider-pack admission receipt on its run row after the provider session opens. Artifact retention then requires that receipt. > - `recordNativeProviderPackAdmission` locked the run row with `FOR UPDATE NOWAIT`. > - A run-event append locks the same run row for a few milliseconds (`FOR NO KEY UPDATE` since #20670, `FOR UPDATE` before). Both conflict with `FOR UPDATE`. Startup appends many events at the same moment. > - When the two met, the admission write failed with `55P03`. The admission state stayed `pending`. Artifact retention then failed the run with `native_provider_artifacts_admission_unverified`. The task stopped as "Recovery needed" with no Retry. > - This pull request makes the admission write wait for the run-row lock within the existing 1000 ms `lock_timeout`. The coordinator claim keeps its `NOWAIT` fence. > - The benefit is that an ordinary concurrent event append no longer fails a healthy run before its first turn. ## Linked Issues or Issue Description Refs #20670 (changed the append lock mode; the conflict with `FOR UPDATE NOWAIT` remains). **What happened?** On a hosted staging instance, three OpenCode runs on remote sandboxes failed in the first minute with `native_provider_artifacts_admission_unverified`. Each run log shows `native provider-pack admission receipt could not be saved` about 0.2–0.7 s after the runner authenticated. The run profile kept `nativeProviderPackAdmissionState.state = "pending"`. The tasks stayed blocked. **Steps to reproduce** 1. Start a native run and hold its `heartbeat_runs` row lock in another transaction, as a run-event append does. 2. Call `recordNativeProviderPackAdmission` for that run. 3. Observe `could not obtain lock on row in relation "heartbeat_runs"` (`55P03`). **Expected behavior** The admission waits a short, bounded time for the append to commit, then saves the receipt. ## What Changed - `recordNativeProviderPackAdmission` sets `lock_timeout = 1000ms` for every call, not only `waitForClaim` calls. - The run-row lock is now `FOR UPDATE` without `NOWAIT`, so it waits for a concurrent append within that bound. - The coordinator (`native_run_finalizations`) lock keeps `NOWAIT` when the caller does not wait for the claim. The existing fence tests still pass. - New PostgreSQL test: `waits for a concurrent run-event append's run-row lock instead of losing the admission` (both `waitForClaim` modes). ## Verification - RED on `origin/master` (`c444da7d05`): the new test fails with `55P03` in both modes. - GREEN with this change: `pnpm --filter @paperclipai/server exec vitest run src/services/native-runtime/native-provider-pack-admission.test.ts` (37 passed). - `pnpm --filter @paperclipai/server typecheck` passes. - `pnpm verify`: see the result below. ## Risks - Low risk. The normal path has no contention and does not wait. Under contention the admission waits at most 1000 ms, before any provider turn. - A lock wait between the coordinator row and the run row can now meet a deadlock. PostgreSQL detects it and raises an error. That error takes the same caught path as the earlier `55P03`, so the result is no worse than before. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with tool use (shell, file edits, read-only staging API reads). ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude <noreply@anthropic.com> |
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6e524d8a69 |
fix(workspaces): stop retrying a copy-back that hit a full sandbox disk (#20678)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - After a native run, Paperclip copies the agent's sandbox workspace back to durable storage. This is finalization. > - The copy-back builds an archive inside the sandbox. When the sandbox disk is full, the copy-back fails with `remote_workspace_sandbox_disk_full`. > - Finalization treated that failure as transient. It retried three times. Each attempt took about 15 minutes for a large workspace, and nothing freed space between attempts. > - Saved-work recovery already reclaims the retained sandbox's inactive provider cache when a save hits a full disk. It runs only after finalization ends. > - This pull request ends finalization on the first full-disk copy-back failure, with the accepted result kept, so saved-work recovery starts at once. > - The benefit is that the task gets its files saved sooner, and the user sees what happened instead of "failed after 3 attempts". ## Linked Issues or Issue Description Refs #19619 (related: records why the read-only capture fallback failed; this PR does not change that path) **What happened?** On staging, a native run finished its turn and its result was accepted. The workspace copy-back then failed three times with `remote_workspace_sandbox_disk_full` (about 7.5 GB of workspace, about 6 GB free). The three attempts spanned about one hour across deploys. Finalization then ended as `native_workspace_sync_out_retry_exhausted`. Saved-work recovery reclaimed the inactive provider cache (about 3 GB freed) and saved the files. **Expected behavior** A full sandbox disk is recognised on the first failure. Paperclip does not spend the finalization budget on attempts that cannot succeed. The agent's result is kept. The user sees that the disk is full and that Paperclip saves the files again without another provider turn. **Steps to reproduce** 1. Run a native task on a remote sandbox whose workspace is larger than the free sandbox space. 2. Let the provider turn finish. 3. Observe three copy-back attempts that each fail with `remote_workspace_sandbox_disk_full`. ## What Changed - `recordRetryableFailure` treats a workspace failure whose cause starts with `remote_workspace_sandbox_disk_full:` as an exhausted budget on the first attempt. The code stays `native_workspace_sync_out_retry_exhausted`, so the existing export hold, saved-work recovery, and export Retry apply unchanged. - The run error for that case says that the sandbox disk is full and that Paperclip saves the files again without repeating the agent's work. It no longer says "after 3 attempts". - Other copy-back failures keep their bounded retry. - `captureRemoteWorkspaceArchive` rethrows the read-only fallback's own failure when that fallback only lost its connection (`transport_closed`, `provider_unavailable`, `provider_rate_limited`, `sandbox_state_transition`). That failure is not disk-full, so finalization keeps its bounded retry for it. Other fallback failures keep the disk-full code. - `remoteWorkspaceFailureCause` records the server-built read-only capture failure, so a failed save names where the fallback stopped. - The transport exports `REMOTE_WORKSPACE_SANDBOX_DISK_FULL_CODE`. The finalizer and tests use it. - `doc/execution-semantics.md` describes the new rule. ## Verification - `cd server && npx vitest run src/services/native-runtime/native-run-finalizer-telemetry.test.ts src/services/remote-workspace-transport.test.ts` (195 pass). - New test "hands a full sandbox disk to saved-work recovery on the first copy-back failure" fails on `origin/master` (the failure stays `retryable_failure`) and passes with this change. It completes an accepted result first and checks that the result stays linked and that no agent wakeup is created. - New transport test "keeps a full disk only when the read-only fallback did not just lose its connection": the two dropped-connection cases fail on `origin/master` and pass with this change. - New test "keeps other copy-back failures on their bounded retry" passes before and after. - `cd server && npx tsc --noEmit` passes. `pnpm verify` selected 2504 test files because the finalizer is widely imported; its first selected batch passed, and required CI supplies the full run. ## Risks - Low risk. The terminal state is the same state that three failed attempts produce today. Only the timing changes. - A sandbox whose disk frees space by itself between attempts now waits for saved-work recovery instead of the next finalizer attempt. Saved-work recovery repeats the save with its own bounded attempts, so this does not lose work. - Upgrade safety: a run saved by an older release in `retryable_failure` with this cause ends on its next full-disk failure. No migration is needed. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, with tool use (shell, file edits) in Claude Code. Extended reasoning was not configured. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude <noreply@anthropic.com> |
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2eede8b318 |
fix(native): give a relaunched settled runner its admitted provider pack (#20683)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - After a server restart or a same-run retry, a remote native run reattaches to its runner in the sandbox (`reattach_remote_runner`). > - When the controller saved the runner artifact, the executor prepares that run as an adoption. It skips provider-pack selection, because a live adopted runner keeps its launched provider. > - The reattach probe can instead find the runner settled and exited (`verifyRemoteRunnerOrSettledExit`). Then nothing is adopted, and the transport relaunches the runner from its durable state. That relaunch must start the provider again, so it needs the provider-pack launch inputs. > - The executor did not give them. OpenCode failed with "OpenCode executable is missing from the provider pack". ACPX failed with "ACPX launch profile omitted its provider-pack authority or verified artifact digests". Both ended the run. > - This pull request selects the saved (admitted) provider-pack authority on that settled-exit relaunch and verifies it as an exact installed identity, as an ordinary reattach does. > - The benefit is that a restart or a same-run retry can resume an exited runner with the same provider pack, instead of failing. ## Linked Issues or Issue Description **What happened?** On a hosted staging instance, two OpenCode runs and one ACPX (Claude) run were interrupted by a deploy (SIGTERM) or ended a turn without a result. The server scheduled a same-run retry that reattached to the existing remote runner. The runner had exited cleanly (`runner_remote_process_exited lifecycle=suspended`). The retry then failed within three seconds with `runner_remote_provider_artifact_incompatible`. **Steps to reproduce** 1. Prepare a remote OpenCode or ACPX run with a persisted runner artifact (`controllerPersistence.runnerArtifact`). 2. Reattach with `restartRecovery.kind = "reattach_remote_runner"`, where the runner process is not running and its state is `suspended` and settled. 3. Observe that the transport options have no `adoptExistingRunner`, no `providerPackAuthorityDigest` and no `opencodeCommand` / `acpxSidecarSha256`. **Expected behavior** The relaunch gets the admitted provider pack's launch inputs, or it fails with a clear pack-identity error. ## What Changed - `createRunnerdBackend` (native session executor): when a persisted-runner reattachment finds no live runner to adopt, select the saved provider-pack authority (`reattach: true`), so `expectedProviderPackManifest` is the admitted pack. - `prepareRemoteRunnerAssets` no longer returns early for that relaunch. It verifies the installed pack as an exact identity and sets the active pack root, the same path as a reattach without a persisted artifact. - A live adopted runner is unchanged: it still skips pack selection. - The test `uses the bundled Linux image authority for remote opencode|claude-x64` now also covers the settled-exit relaunch for OpenCode and ACPX. ## Verification - RED on `origin/master` (`c444da7d05`): the extended test fails for `opencode` and `claude-x64` (the relaunch options have no provider-pack inputs). - GREEN with this change: `pnpm --filter @paperclipai/server exec vitest run src/services/native-runtime/native-session-executor.test.ts -t "uses the bundled Linux image authority"` (14 passed). - `pnpm --filter @paperclipai/server typecheck` passes. - `pnpm verify`: see the result below. ## Risks - Upgrade safety: the relaunch reads the saved authority, so a newer controller does not select a newer pack for an older session. It requires an exact installed identity. If the sandbox no longer has that pack, the relaunch fails with a pack-identity error, and the existing Retry path applies, as before. - No change to a live adoption, to fresh runs or to the normal path before `turn.start`. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with tool use (shell, file edits, read-only staging API reads). ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-authored-by: Claude <noreply@anthropic.com> |
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e33ede9a8a |
fix(native): settle a restart-orphaned write_document from its transactional receipt (#20674)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - A native run calls Paperclip tools such as `write_document`. The runner saves each tool input durably before the server runs the tool, and the server saves a result receipt > - A control-plane restart can cut a `write_document` call after the runner saved its input and before any result was saved > - Recovery then has no proof of the outcome. A call from an earlier server process settles as "unknown outcome" (#20628). A call the current server process admitted stays pending, close cannot prove that the provider drained, and the session quarantines (`native_session_cleanup_quarantined`). A person must click Retry > - `write_document` saves its revision and its idempotency receipt in one database transaction, under the run and issue row locks. The revision is also compare-and-swap on `baseRevisionId`. So the receipt is a durable outcome record: present means applied, absent means not applied > - This pull request makes recovery use that proof. Recovery runs the same receipt-guarded write. It replays the saved result, or it applies the write exactly once > - The benefit is that an orphaned `write_document` settles with its real result. The document is never written twice, and the run does not need Retry for this call ## Linked Issues or Issue Description **What happened?** Daytona restart-chaos wave `w-20261110T174930-s9205`, task t01 (codex, workload C1, fault RR2). A restart cut a `write_document` call. The close settlement showed `semanticTools.pending: [{ operationId: "write_document", callId: "exec-8b79ab78-…" }]` and `providerDrained: false`. The session quarantined with `native_session_cleanup_quarantined`, and the task needed Retry. Since #20628, a call that an earlier server process admitted settles as `tool_call_interrupted_by_restart` with an unknown outcome. The agent then has to guess whether the write applied. **Expected behavior** When a durable record proves the outcome, recovery uses it. A write that applied returns its saved result. A write that did not apply runs once. When the record cannot prove it, the call stays as it is today. **Steps to reproduce** 1. On master, run `pnpm --filter @paperclipai/server exec vitest run src/services/native-runtime/paperclip-runner-tool-authority.test.ts -t "orphaned"`. 2. `authority.recover()` returns `null` for a `write_document` that has no receipt, so the call stays unsettled. Refs #20628, #20639, #20507 ## What Changed - `PaperclipRunnerToolAuthority.recover()` now settles `write_document` through its transactional receipt (`#recoverTransactionalWrite`). It runs the same receipt-guarded mutation as an ordinary call. If the receipt exists, it returns the saved result and writes nothing. If no receipt exists, it applies the write once. - A definite refusal that rolls the transaction back (a 4xx such as a stale `baseRevisionId`, a reused idempotency key, invalid input) settles as a tool error. Any other failure leaves the call unsettled, as before. - The set of operations with this proof is explicit: `TRANSACTIONAL_RECEIPT_OPERATIONS` contains only `write_document`. Other tools keep their current recovery rules. - New test: an orphaned `write_document` with no receipt applies once; a second recovery and a late original call replay the receipt; an applied write recovers its saved result; a stale base settles as a tool error with no change. - Updated test: a reused idempotency key with other input now settles as an `paperclip_runner_tool_idempotency_conflict` tool error instead of staying pending. The receipt proves that this call can never apply under that key. - Docs: `packages/paperclip-runner/docs/durable-recovery.md` (semantic operations that outlive a turn) and a new design note, `doc/plans/2026-11-10-durable-turn-start-and-tool-call-records.md`. The note also covers the second change (an ACPX turn start cut off before the prompt reached the provider), which comes in a separate pull request. ## Verification - Red on master, green here: `pnpm --filter @paperclipai/server exec vitest run src/services/native-runtime/paperclip-runner-tool-authority.test.ts` (43 passed). - `pnpm --filter @paperclipai/server exec vitest run src/services/native-runtime/native-runner-restart-recovery.integration.test.ts`: 178 passed. One unrelated ACPX timing test failed once under load and passed when run alone. - Server typecheck: `npx tsc --noEmit -p server/tsconfig.json` passes. - `pnpm verify` exits 2 (a runner doc changed), so required CI supplies the broad coverage. - Live restart-chaos wave: see the comment on this pull request. ## Risks - Recovery can now apply a write that never applied before the restart. This is the call the agent made, applied once. The write is compare-and-swap on `baseRevisionId`, so it cannot overwrite a revision that someone wrote after the agent read the document. That case settles as a conflict error. - Upgrade safety: no saved shape changes. Receipts saved by the previous release have the same shape. A server on the previous release keeps its current recovery for these calls. - Time to first token: no change. This code runs only during recovery. - No runner source changes, so no new runner image is needed. ## Model Used Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, with tool use (shell, file editing) in Claude Code. Extended reasoning was used. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude <noreply@anthropic.com> |
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cec903c6f0 |
fix(native): retire a finished remote owner whose gone Runner left a delivery unacknowledged (#20677)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - A native follow-up run on a remote sandbox first proves that the previous per-turn owner finished. Then it retires that owner's controller journal and starts a new Runner. > - The proof requires a settled journal. A command that the Runner did not acknowledge holds the owner. > - On staging, a per-turn owner committed its result and its Daytona sandbox was destroyed after the turn (`paperclip_runner_destroy_after_turn`, cleanup `success`). Its journal still held a `run.attach` or a `semantic_tool.result` that the Runner never acknowledged. > - The next run failed with `prior_owner_terminal_state_indeterminate; retirement_refused=journal_commands_unsettled(run.attach.pending)` (or `semantic_tool.result.pending`). A Retry or a new message gets the same journal, so it fails the same way. The task stays blocked. > - Retirement already excuses the Runner's own lifecycle commands when the prior sandbox lease ended on another sandbox. This pull request applies the same rule to deliveries that only that gone Runner could receive. > - The benefit is that these follow-ups start by themselves. Commands that carry user intent still hold the owner. ## Linked Issues or Issue Description **What happened?** A census of staging failures (48 h, Nov 9–10) found 6 failed runs with `prior_owner_terminal_state_indeterminate` and `retirement_refused=journal_commands_unsettled(run.attach.pending | semantic_tool.result.pending)`. The last one was at 18:56 UTC on Nov 10. In two examples that I checked: - The previous run succeeded. Its result was committed and its coordinator lease was released. - Its lease policy was `ephemeral`. The lease is `expired`, with `failureReason=paperclip_runner_destroy_after_turn` and `cleanupStatus=success`. - The follow-up got a new sandbox (a different provider lease) and refused in about 11 s. It started no Runner. The task became `blocked`, and the next action was "Send a message to continue". **Expected behavior** When the record proves that the previous Runner is gone, an undelivered attachment, tool answer or read cannot run. The follow-up retires the finished owner and starts a new Runner. Retirement replays no command. **Steps to reproduce** 1. Finish a per-turn remote native run whose controller journal keeps a `run.attach` or `semantic_tool.result` command in `pending`. 2. Let the sandbox lease of that run end (`expired` or `released`) on its own sandbox. 3. Start a follow-up run that gets a new sandbox. 4. Observe `retirement_refused=journal_commands_unsettled(run.attach.pending)`. **Paperclip version or commit** Staging builds of Nov 10. The refusal still reproduces on `master` at `48c6e996da` (the new tests fail there). ## What Changed - `native-session-executor.ts` (`readSettledRunnerdProjection`): when the prior run's sandbox leases ended on another sandbox (`remoteRunnerGone`, the existing proof), unfinished `run.attach`, `semantic_tool.result`, `session.snapshot` and `session.goal.get` commands no longer hold the retirement. These join the lifecycle commands that the rule already excused. - In the same case, a journaled `semantic_tool.result` answers its `semantic_tool.input`. The controller journals the answer after the tool ran. Only its delivery was outstanding. - No other proof changes. The prior run must still be terminal, with a committed result, a released coordinator lease, no recovery state, a stopped or fenced controller, a delivered `run.terminal`, and no live work after it. Quarantine copies must pass the same checks. - `doc/execution-semantics.md`: describe the rule. ## Verification - `server/src/services/native-runtime/native-recovered-owner-followup.test.ts` (real Postgres): - New: "retires a finished remote owner with an unacknowledged pending-attach / pending-tool-result when its sandbox lease ended on another sandbox". It fails on `master` with the exact staging errors `journal_commands_unsettled(run.attach.pending)` and `journal_commands_unsettled(semantic_tool.result.pending)`. It passes with this change, and the log shows the retirement. - Held cases stay held: a lease that is still retained, a lease on this run's sandbox, no lease record, and a tool input with no journaled answer (`journal_tool_input_unanswered`). - New: "keeps a stopped local owner held by an unacknowledged run.attach". A local Runner is not gone by record. - Whole file: 95 passed. - Neighbouring suites pass: `explicit-native-continuation.test.ts` and `native-controller-recovery.integration.test.ts` (460 tests). - `npx tsc --noEmit -p server/tsconfig.json` passes. - `pnpm verify` exits 2: a global CI input changed (`doc/execution-semantics.md`). Required CI supplies the broad coverage. - Live proof: not done. The redeploy chaos scenario (K15) is not on `master` yet. Tests only. ## Risks - The rule applies only when every sandbox lease of the prior run is `released` or `expired`, has a release time, and names a different provider lease than this run's. A reusable sandbox that this run resumed keeps the existing hold. - A command that carries user intent (`turn.start`, `turn.steer`, `request.resolve`, `interaction.receipt`, `external_provider.operation`, `session.goal.set`/`clear`, `session.close`, `run.cancel` and others) still holds the owner. - Retirement archives the old journal under `continuity-breaks` and replays nothing, as before. - No persisted shape changes. Old saved journals are read by the same rule. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, used through Claude Code with tool use and code execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-authored-by: Claude <noreply@anthropic.com> |
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e9db5e0d03 |
perf(github): read the inherited review waits of an issue list in one pass (#20673)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - An agent can review a GitHub pull request. After the agent publishes the review, the task can wait in review for the next GitHub reply. A later run of the same task can inherit this wait. > - Issue lists and inbox attention show these waits. For each waiting task, the server reads the inherited GitHub review wait: the source comment, the latest review, and the review publication. > - The server did these reads one time for each waiting task. A list request with N waiting tasks sent N copies of the prepared review statement and N copies of the publication read. > - On a hosted database, the prepared review statement ran about 270,000 times in about 2.5 hours (up to 87 calls per second). The run identity read before it ran the same number of times. The list read that calls it ran only about 1,400 times, so each list read started about 190 review reads on average. No other caller reads the waits of many runs in a loop. > - This pull request reads the reviews and the publications of all waits of one list request with one statement each. Each wait gets the same result as before. > - The benefit is about 200 times fewer review statements and fewer pool connections for each issue list. ## Linked Issues or Issue Description Refs #20400 (shares review-wait reads between the callers of one request). Refs #20551 (authorizes the waits of one issue page with one read; this change does the same for the inherited GitHub review reads of that page). **What happened** `listExternalReviewWaits` called `readInheritedGitHubReviewWait` one time for each candidate wait, inside `Promise.all`. Each call sent a run identity read, a source-message read, the prepared `inherited_github_review_wait` statement, and a publication read. A list with N waits sent each statement N times. **Expected behavior** One list request sends one review statement and one publication read for each company. The result of each wait does not change. **Steps to reproduce** 1. Put many tasks of one company in review with an inherited GitHub review wait. 2. Open the issue list or the inbox. 3. Count the statements of the database. The review statement runs one time for each waiting task. ## What Changed - `server/src/services/chat-channels/github/review-wait.ts`: - Split `readInheritedGitHubReviewWait` into shared steps: the source comment read, the review checks, the publication key, and the published result. The single-run read uses the same prepared statement and the same checks as before. - Add `readInheritedGitHubReviewWaits(db, runs)`. It reads the source comment of each run with the same lineage check as before. Then, for each company, one `DISTINCT ON` statement reads the latest review for each (source comment, task, agent) key, with the same joins, filters and order as the prepared statement. One read finds the processed publications. Each run gets the same result as a separate call: `null`, `revoked`, or `published`. - `server/src/services/native-runtime/external-review-wait.ts`: `listExternalReviewWaits` uses the batch read. The rest of the list and its authorization do not change. - `server/src/__tests__/github-review-wait.test.ts`: a new test reads 18 runs in one batch and compares each result with a separate single-run read. The runs include each revocation case (connection disabled or inactive, review state, review agent, repository, repository id, thread, publication, identity, company), a newer unreviewed head, no identity, no task, an endpoint of another agent, a run in another company and a duplicate run. The test also makes sure that the batch sends one review statement and one publication read for each company. The existing revocation tests also check the batch read. - `server/src/__tests__/helpers/github-review-wait.ts`: the seed helper can add a wait to an existing company and agent. ## Verification - `pnpm vitest run server/src/__tests__/github-review-wait.test.ts server/src/__tests__/github-review-check-state.test.ts server/src/__tests__/issue-list-review-wait-authorization.integration.test.ts server/src/__tests__/blocked-inbox-review-wait-scope.test.ts` - Focused local run of every test that imports the changed modules or the seed helper (7 files, 335 tests passed), including `external-chat-wait.integration.test.ts`, `external-review-wait.test.ts` and `legacy-execution-recovery.test.ts`. The change to the shared seed helper makes `pnpm verify` select the full server suite, so CI supplies that coverage. - Local measurement on real PostgreSQL (embedded PostgreSQL, `ANALYZE` after seeding). One company and agent, each wait has 5 reviews and 10 outbound messages. "Before" is the previous list code: one `readInheritedGitHubReviewWait` call for each run in `Promise.all`. "After" is `readInheritedGitHubReviewWaits`. The runs alternate order in each pair. Both return equal results in every sample. | Waits | Version | Statements | Review statements | Median ms | Min–max ms | Samples | | --- | --- | --- | --- | --- | --- | --- | | 200 | before | 800 | 200 | 106.8 | 98.0–117.5 | 10 | | 200 | after | 402 | 1 | 44.3 | 41.6–50.9 | 10 | | 20 | before | 80 | 20 | 9.8 | 8.6–14.7 | 12 | | 20 | after | 42 | 1 | 6.3 | 5.3–7.0 | 12 | - `EXPLAIN (ANALYZE, BUFFERS)` of the batch review statement for 200 waits: index scans on each join, 6.7 ms execution. The single statement: 0.05 ms execution and about 2.7 ms planning for each call. - The run identity read and the source-message read still run one time for each wait. They are cheap on the hosted database (about 0 ms each), and they keep the lineage check for each run. ## Risks - Low risk. The batch statement uses the same joins, filters and order as the prepared statement, and `DISTINCT ON` keeps the first row for each key. The array filters can also match a mix of two keys. The code uses only rows of exact requested keys. - The single-run read and its prepared statement do not change. The finalizer, the status committer, and the attachment reuse paths still use it. - Errors do not change: a 403 from the lineage check gives `revoked`, and other errors are thrown. - No migration. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, used through Claude Code with tool use (code reading, editing, shell, tests). ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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c14f2fe45d |
fix(native): read the scheduled-resume evidence the resume reconciler claimed (#20656)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - #20645 lets a local same-run scheduled resume send the one same-conversation continuation for a turn lost on restore. It applies only when durable records prove three facts: the previous runner stopped, the attempt was admitted within the budget, and it is the same checkpointed conversation. > - It read the third proof from the coordinator's saved `failure_detail` while the phase was `retryable_failure`. > - In production, the resume reconciler (`claimNativeSessionResumptions`) claims the run first. It moves the coordinator to `observed` and clears `failure_detail`. So the executor never saw that evidence, and #20645 refused every real scheduled resume. > - The restart-chaos L7 wave showed this live. Codex B5 TM2 hit the exact path (`runner.drain` timeout, scheduled resume, `provider_turn_lost_on_restore`), sent no continuation, and needed Retry. > - This pull request makes the reconciler record that evidence durably when it claims the run, and makes the executor read it from there. > - The benefit is that #20645 works on the real path. The proof rule is unchanged. ## Linked Issues or Issue Description Refs #20645 **What happened?** Wave `w-20261110T212307-s9107` (L7, seed 9107, local, master plus #20645), task codex B5 TM2: - `native_session_recovery_failed: runner_local_connect_failed: PRP command runner.drain timed out`; - `retryable_failure` with `recoveryMode: "exact_checkpoint_resume"`, `recoverable`, `providerSessionEstablished` and `checkpointExists` all set; - `native.local_process_stopped`; - attempt 2 started; - `turn.failed` with `provider_turn_lost_on_restore` for the same turn ID that the checkpoint was running. No continuation was sent. The run failed with `native_provider_terminal_failed` and was preserved with `uncertain_provider_action`. **Expected behavior** The proven scheduled resume sends the single continuation. **Steps to reproduce** The new integration test below. The live path is timing-dependent (the L7 command in #20645). ## What Changed - `native-finalization-reconciler.ts`: when it claims a same-run resume, the reconciler appends one `same_run_resume` entry to `recovery_history`. The append is bounded like other history writes, and it runs in the same update that clears the failure. The entry copies `recoveryMode`, `recoverable`, `providerSessionEstablished`, `checkpointExists`, `successorRunId` and `replacementDenied` from the saved failure, with the controller boot and provider attempt. - `scheduled-resume-continuation.ts`: the evidence for the third proof now comes from either of two durable records: - the saved failure, when the executor claims a `retryable_failure` coordinator directly (unchanged); or - a reconciler claim: an `observed` coordinator whose last history entry is a `same_run_resume` entry naming the executor's own controller boot. The two other proofs are unchanged: the stop receipt, and an admitted attempt from 1 to 3. - `native-session-executor.ts`: passes the coordinator's last history entry and the controller boot to the decision. - `doc/execution-semantics.md`: describes the recorded evidence. Readers of `recovery_history` that look at the last entry do so only for restart claims, Stop recovery and shutdown suspension. Restart recovery's previous-claim lookup skips non-claim dispositions, so a `same_run_resume` entry does not change those paths. **Still refused** (tested): - every #20645 case; - the last history entry is not the resume claim, or there is no history; - the resume claim was recorded by another boot; - the claimed evidence is a bootstrap retry, has no checkpoint, or records a replacement; - a reconciler-claimed resume without a stop receipt. ## Verification - `native-scheduled-resume-continuation.integration.test.ts` now also runs through the real reconciler claim (`claimNativeSessionResumptions`) before `executePaperclipNativeSession`. On master the reconciler-claimed allowed case fails (`resumeInterruptedTurn` is false). With this change it is true, and the claim admits attempt 2. A reconciler-claimed resume without a stop receipt still passes false. - `scheduled-resume-continuation.test.ts`: decision cases for the reconciler-claim entry. - `native-session-resumption.test.ts` passes. 54 tests pass across the three files. - `cd server && npx tsc --noEmit` passes. - Live: not yet. The failing wave above is the reproduction. A rerun is timing-dependent. ## Risks - One more `recovery_history` entry per scheduled resume, inside the existing 20-entry bound. - The proof rule itself is unchanged. This only reads the same evidence from the record where it now survives. - No schema change. A run claimed by an earlier build has no `same_run_resume` entry, so it keeps the existing failure: refused, with Retry offered as today. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with tool use (shell, file edits, test runs). Extended reasoning. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude <noreply@anthropic.com> |
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48c6e996da |
fix(native): continue a task whose quarantined completed turn's holds settle (#20662)
<!-- Write all pull request text in Simplified Technical English (ASD-STE100): short sentences, one instruction per sentence, simple approved vocabulary, and the active voice. --> ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Before a remote run starts, workspace preparation attaches the verified saved work of earlier runs of the same task. > - Preparation failed with `remote_workspace_recovery_receipt_invalid` when any earlier run had a recovery receipt that it could not verify. > - A refusal cannot change the saved state, so every Retry failed in the same way, and the task stayed blocked. Recoveries must fall back automatically. > - This pull request skips an unverifiable source. It attaches nothing unverified and starts from the workspace's newest verified save. > - The benefit is that Retry and continuations start again, while strict receipt checks still decide what is attached, and no saved work is changed. ## Linked Issues or Issue Description Refs #20631 **What happened?** On staging, after the deploy that included #20631, a user pressed Retry on a task whose previous run failed with `native_controller_recovery_missing_evidence:runner_not_settled`. The new run failed in setup in under a minute with `setup_failed` / `remote_workspace_recovery_receipt_invalid` (`executionRecovery: bootstrap`, `providerWorkStarted: false`). The task stayed blocked. Another Retry would fail the same way. #20631 accepted one shape of this refusal (a source that saved only the snapshot its own restore loaded). This task had a different shape. **Expected behavior** A Retry starts. A source whose receipt cannot be verified is not attached, and its saved state stays intact for workspace recovery. **Steps to reproduce** 1. Let a remote native run fail before provider work and leave a recovery receipt or restore hold that does not verify (for example a receipt on an unsaved reference, a receipt from another epoch, or a saved reference without a receipt). 2. Press Retry on the task. 3. See the new run fail in setup with `remote_workspace_recovery_receipt_invalid`. **Paperclip version or commit** Staging deploy that includes `e3bc4ca798`. The gap remains on `master` at `a3b34a9d88`. ## What Changed - `attachPreservedRemoteWorkspaceSnapshots` no longer throws for an unverifiable source. Each of the five refusal shapes now skips the source and logs `remote_workspace_recovery_receipt_invalid` with a reason: `receipt_without_reference`, `reference_unreadable`, `receipt_on_unsaved_reference`, `receipt_unverified`, and `receipt_snapshot_missing` (was `remote_workspace_recovery_snapshot_missing`). - `retainRemoteRecoveryAttachments` no longer throws for a retained recovered copy that it cannot verify. It does not publish that copy again. The files stay in the workspace. - The writer check (`remote_workspace_recovery_writer_changed`), the workspace access check, and snapshot read and digest failures still refuse. - `doc/execution-semantics.md` describes the fallback rule. ## Verification - Red on unfixed code: `remote-workspace-recovery-receipt-fallback.test.ts` (moved out of `workspace-recovery-preparation.test.ts` to keep that file under 1,000 lines) "starts a Retry from the newest verified save when a predecessor has %s" (6 shapes: `receipt_without_reference`, `unreadable_reference_with_hold`, `receipt_on_prepared_reference`, `superseded_snapshot_with_hold`, `receipt_from_other_epoch`, `receipt_for_other_run`). All 6 failed with `remote_workspace_recovery_receipt_invalid`. The source is a native run that failed with `runner_not_settled`, and the writer is a Retry (`retryOfRunId`, `taskRetryRequestId`) that follows the real ancestry query. - Green: the same 6 tests pass. They also assert that nothing is attached, and that the source run row, its workspace operations, and its snapshot row are unchanged. - Updated safety tests: the canonical-attachment fault matrix now expects no attachment for receipt faults, and still expects a refusal for a missing or corrupt archive and for a wrong company or task. The retained-history test expects an unverifiable retained copy to be left out of the published list, while verified copies stay published. - `npx vitest run src/services/remote-workspace-recovery-receipt-fallback.test.ts src/services/workspace-recovery-preparation.test.ts`: 91 passed. - `npx tsc --noEmit -p server/tsconfig.json` passes. - `pnpm verify` returns exit 2, because a global doc input changed (`doc/execution-semantics.md`). Required CI supplies the broad coverage. - Not verified live on Daytona. I could not read the staging rows for this task: the browser had no free tab. The tests cover every refusal shape of this function, so the exact staging shape is one of them. ## Risks - Previous-release state: the rule reads the same rows as before (run reference, result hold, workspace operations, recovery actions, snapshots). Rows that earlier releases saved carry forward. No migration. A blocked task recovers on its next Retry or wake. - A Retry can now start without files from an unverifiable source. Those files are not lost: the source's snapshot, restore hold, receipts and recovery action stay unchanged, and workspace recovery still owns them. The skip is logged with a named reason. - A retained copy that fails verification is dropped from the published list. Its directory stays in the workspace and is no longer retired automatically. - A missing or corrupt snapshot archive still refuses. A permanently lost archive therefore still blocks attach. This PR does not change that. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with tool use (shell, file edits). Extended reasoning enabled. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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9296c74e8d |
fix(native): let a restart claim take back its lapsed lease at budget admission (#20650)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - After a control-plane restart, restart recovery claims an interrupted native run (`resume_dead_runner`) and grants a 20-minute lease. Budget admission then re-checks that the claim still owns the run before the resumed run may start provider work. > - A host sleep, or the restart-chaos fault TM2, can make that stored lease look expired while its owner is alive. #20625 lets the owner take back such a lease when the row still shows exactly its own claim. That rule did not cover budget admission. > - So a claim whose lease lapsed before dispatch was refused with `Native recovery no longer owns provider dispatch`. The run failed with `adapter_failed`, recovery held it with `native_continuation_requires_reconciliation`, and the user had to click Retry. > - This pull request applies the #20625 rule in budget admission: the claim takes its lease back through the existing re-acquire condition. > - The benefit is that a run resumed after a restart survives a time jump before dispatch with no Retry. Every fence and every budget check stays the same. ## Linked Issues or Issue Description Refs #20625, #20474 **What happened?** Restart-chaos wave L7 (seed 9107, local) on a branch with #20625, task codex B5 TM2. A TM3 restart claimed the run (`resume_dead_runner`, generation 2). TM2 then aged every database time by one hour before the resume reached dispatch. Budget admission (`lockRunBudgetRecoveryOwnerInTransaction`) required a live lease and threw `Native recovery no longer owns provider dispatch`. The run failed with `adapter_failed`, recovery stopped with `native_continuation_requires_reconciliation` / `preserve_without_replay_v1`, and the task needed Retry. **Expected behavior** The claim's own lapsed lease is taken back, and the resume is admitted when the budget allows it. **Steps to reproduce** `node cli/node_modules/tsx/dist/cli.mjs tests/restart-chaos/main.ts --env local --adapters codex,claude --workloads A1,B5,C1 --faults TM1,TM2,TM3 --time-age-hours 1 --concurrency 3 --tasks 6 --seed 9107` (timing-dependent). ## What Changed - `native-execution-lease.ts`: two new helpers. Both use the #20625 own-claim rule. Neither takes a lock out of order. - `readOwnNativeRecoveryClaimLease` (read-only) returns `live`, `lapsed_own_claim` or `lost`. It compares the lease against the database clock. A lapsed lease counts as `lapsed_own_claim` only when all of these hold: - the same lease owner; - this process's controller boot, pid and process start; - a non-null `recovery_state`; - `nativeExecutionLeaseHeldCondition({ remote: false, controllerGeneration })`, which applies the #20625 own-claim rule and every #20474 untouched check; - no non-local environment lease on the run. - `extendOwnNativeRecoveryClaimInTransaction` extends such a lease by the local execution TTL, with one conditional UPDATE on the same predicate. - `budget-reservations.ts`: - `lockRunBudgetRecoveryOwnerInTransaction` still refuses another owner, and refuses a lapsed lease unless it is the run's own untouched claim. It no longer locks the run row, so the documented coordinator → issue → run order holds. - The lease is extended only at the end of an admitted reservation (`reserveRunBudget`) or an admitted dispatch recheck (`recheckRunBudgetReservationInTransaction`). At those points the caller already holds the run row lock. A refused admission, for example one over budget, leaves the lease lapsed. - `heartbeat-native-restart-suspension.test.ts`: the test "still settles a recovery whose claim merely expired" encoded "expired means not the owner". #20474 and #20625 changed that rule for an untouched own claim. The test now has two cases: - an expired claim that another actor recorded on (`awaiting_evidence`) still settles with no provider session; - an untouched expired claim is dispatched. - `doc/plans/2026-11-09-explicit-native-lease-claim-tokens.md`: Step 1 lists the new user of the rule. ## Verification - New `server/src/__tests__/native-recovery-dispatch-lease-reacquire.test.ts`: - `reserveRunBudget` takes back the claim's own lapsed lease and admits the resume. This fails before the change. - An over-budget resume is still refused, and its lease stays lapsed. - Fenced variants each throw `Native recovery no longer owns provider dispatch` and leave the row unchanged: a graceful-shutdown suspension, an appended failure settlement, `awaiting_evidence`, `blocked`, a claim from an earlier generation, another boot, a remote sandbox lease, and another lease owner. - At the dispatch gate (`recheckRunBudgetReservationInTransaction`), an admitted own claim gets its lease extended, and a fenced claim is refused with the row unchanged. - Related suites pass (308 tests): `native-execution-lease-reacquire.test.ts`, `closed-native-receipt-accounting.test.ts`, `heartbeat-native-predispatch-retry.test.ts`, `run-dispatch/adapters/postgres.test.ts`, `heartbeat-native-restart-suspension.test.ts` and `heartbeat-restart-claim-lapse.test.ts`. - `cd server && npx tsc --noEmit` passes. - Live: one L7 wave (seed 9107) ran on the first commit of this branch (`w-20261110T212307-s9107`). It logged 0 `Native recovery no longer owns provider dispatch` refusals, against 1 in the previous wave. Codex B5 TM2 got past dispatch, but it still needed Retry for another reason: after a `runner.drain` timeout, the scheduled same-run resume did not send the continuation of #20645. That case is tracked separately. The other five tasks passed. ## Risks - This widens when a restart claim can take back its own lapsed lease, and only at budget admission. It is local only. It needs the same owner, boot and generation, and the row must show exactly that claim. A claim that any other actor touched still fails as before. - Budget hard-stop behaviour is unchanged. The lease is extended only after budget admission passes. - No schema change and no migration. Rows saved by earlier releases carry the same history shape. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with tool use (shell, file edits, test runs). Extended reasoning. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude <noreply@anthropic.com> |
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de7ceac0de |
fix: preserve compatible historical Codex WEB evidence (#20665)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Native session migration preserves local evidence in encrypted archives. > - Each WEB receipt binds the exact provider directory and exclusion policy. > - The Codex credential refresh change added two excluded files and changed that policy hash. > - A new reader then rejected old receipts even when their facts, files, skills, and authority still matched. > - This pull request accepts the exact prior Codex policy while checking archive paths against the current credential policy. > - Operators can keep valid saved evidence across the upgrade without copying it again. ## Linked Issues or Issue Description Refs: #19814, #20646. **What happened?** A reader upgrade rejected saved Codex WEB evidence because the profile hash changed when `auth-refresh.json` and `auth-refresh.json.tmp` became excluded credentials. The other receipt bindings still matched. This blocked the native harness migration gate. **Expected behavior** The exact known prior profile remains readable when the current archive path checks accept every saved entry. An archive that includes either newly excluded credential file must still fail. Unknown profiles and changed authority must fail. **Steps to reproduce** 1. Preserve WEB evidence with the frozen prior Codex profile and no credential refresh files. 2. Read its unchanged receipt with the current profile. 3. Observe that the old reader returns false solely because the profile hash changed. **Paperclip version or commit** Reproduced against `a3b34a9d88`; final branch is based on `e9343d8501`. ## What Changed - Accept the exact prior Codex profile hash only when the complete current profile has the reviewed successor hash and the provider is Codex. - Keep the current entry and excluded-path checks. Keep facts, controller, archive, skill, and ownership checks. - Add a frozen prior policy fixture with its literal hash. Test old receipt reads, both credential files, unknown policies, changed authority, and current writes. ## Verification - Real PostgreSQL baseline: the frozen old-policy receipt test failed because the reader returned false. The unchanged fixture passes with this fix. - All 18 selected PostgreSQL cases pass on final head after the master rebase: six new cases and twelve existing WEB archive and authority guards (14.93 seconds). - Full layered server typecheck passes on final head after the rebase. The module boundary check passes. - A single read-only native-only candidate check on the deployed dependency graph validated all 54 retained scopes. The 29 prior failures passed, and the other 25 stayed valid. The check made no storage calls or data writes. It did not replace final deployed enrollment acceptance. - Final head `14112d0e3abb6e318a86fe9799d95bddd2dbf76b` passes all [required CI checks](https://github.com/paperclipai/paperclip/actions/runs/42919867108): 55 successful checks, four expected skips, and one neutral review. The legacy security status also passes. Exact-head Greptile review is 5/5 with no open review threads. ## Risks The compatibility branch accepts only the two reviewed policy hashes. A future policy change can require another explicit compatibility decision. The reader still rejects saved credential refresh files. It does not rewrite receipts or change execution authority. No stored schema or operator command changes. ## Model Used OpenAI Codex, GPT-6 family. The exact serving model ID and context-window capacity are not exposed in this session. Used reasoning, source editing, shell execution, and tool calls. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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30403781b9 |
fix(native): keep crediting proven unstarted restarts past the generation limit (#20647)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - A native run survives a control-plane restart through restart recovery, which resumes the interrupted provider turn > - Restart recovery charges a provider attempt only when the provider did work that could be lost, and it stops after three charged attempts > - From controller generation 12 on, every restart charged an attempt before that work rule was checked > - In a busy restart wave, one long task sees 12 to 15 restarts, most caused by other tasks. A restart that hit before the provider accepted a turn was charged, the budget ran out, and a person had to click Retry > - This pull request keeps the work rule past generation 12 for restarts that a durable record proves did not start the provider, and bounds a crash loop with a count of consecutive restarts without provider progress > - The benefit is that a long task survives many unrelated restarts without a manual Retry, while a run that never makes progress still stops ## Linked Issues or Issue Description Refs #20625 (same restart recovery path). No public issue exists for this case. **What happened?** `restartResumeKeepsAttempt` returned "charge" for every restart once the run reached `NATIVE_PROGRESS_CREDIT_GENERATION_LIMIT` (12) controller generations. It did this before it read the work-based outcome. In a local restart chaos wave (L6, seed 9106, task t03, Claude B5 with RR1) the run reached generation 13. The last restart interrupted a resume whose runner started but whose provider had not accepted a turn. That restart was charged at the last attempt, so the claim failed with `execution_recovery_budget_exhausted` and `native_restart_recovery_blocked`. The task needed a manual Retry. **Expected behavior** A restart that a durable record proves did not start provider work does not spend an attempt, also past generation 12. A crash loop that never makes provider progress still stops automatically. When it stops, the task shows a Retry that works. **Steps to reproduce** Run a native task past controller generation 12. Make the last restart hit after `native.process_start_requested` but before `turn.accepted`, with the provider attempt at 3. The new integration test `does not charge a restart past the generation limit whose resume never started the provider` reproduces the failure before the fix. **Paperclip version or commit** `master` at |
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805531cc71 |
fix(native): never leave a cleanup-gated task without Retry or an owner (#20639)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work
> - Native runs close their provider session at the end of each attempt.
When close cannot prove that the runner stopped, the runner keeps a
cleanup gate (`native_session_cleanup_quarantined`) in server memory
> - #20572 hid Retry for every gated run and said "Paperclip finishes
the cleanup automatically". Only a remote environment release settles
the gate. A local gate that needs an operator never settles, and a
server restart loses it
> - A restart-chaos wave on master found two tasks that rested blocked
with no Retry, no scheduled retry and no recovery owner. A person could
not continue them
> - This pull request makes the run's own recovery retire the gate when
the host proves the old processes stopped. It also offers Retry whenever
nothing settles the gate, and it makes that Retry work
> - The benefit is that a cleanup-gated task either continues by itself
or shows a Retry that starts. It never rests without both
## Linked Issues or Issue Description
Refs #20572, #20578
**What happened?**
Restart-chaos wave `w-20261110T185144-s9107` (local, claude, fault TM2:
the server is paused with SIGSTOP for about 33 s). Tasks t04 and t05
completed their provider turn. The runner checkpoint owner lapsed while
the server was paused (`native_runner_checkpoint_owner_lost`). The
session close then failed with `native_session_close_unrecoverable:
runner did not durably suspend before checkpoint`. The provider had
drained and no tool call was pending. The runner kept an
operator-required cleanup gate. Thirty seconds later the run's own
same-run recovery verified that the runner process and group had stopped
(`native.local_process_stopped`). The gate still refused the recovery,
and the run ended `failed` with `native_session_cleanup_quarantined`.
The task showed `canRetry: false` and a cleanup wait until the deadline.
Nothing owned that wait.
**Expected behavior**
When the old runner and provider processes are proven stopped, the run's
own recovery continues. When nothing settles the gate, the task offers a
Retry that starts.
**Steps to reproduce**
1. Run restart-chaos L7: `--env local --adapters codex,claude
--workloads A1,B5,C1 --faults TM1,TM2,TM3 --time-age-hours 1
--concurrency 3 --tasks 6 --seed 9107`.
2. Observe a claude TM2 task rest `blocked` with `canRetry=false`,
`retryWait=true` and no scheduled retry.
**Paperclip version or commit**
master at
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37c50f70c2 |
fix(native): continue a turn lost on restore in a proven same-run resume (#20645)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - A native run keeps its provider conversation when its local runner dies. When the restored runner finds that the active turn was lost, it reports `provider_turn_lost_on_restore` and does not invent a result. > - After a control-plane restart, the admitted restart attempt may send one continuation in that same conversation (#15297). The agent then reconciles unfinished work. The task is not resent. > - A runner can also be lost without a server restart, for example when `runner.drain` times out. The run then resumes itself after the retry delay from its exact checkpoint. That path never allowed the continuation, because the executor passed `resumeInterruptedTurn` only for a `resume_dead_runner` restart claim. > - So the lost turn failed with `native_provider_terminal_failed`, automatic replacement was refused (`uncertain_provider_action`), and the user had to click Retry. > - This pull request allows the same single continuation for that resume, but only when durable records prove the same three facts that a restart claim proves. > - The benefit is that a runner lost mid-turn continues in the same conversation with no Retry. No case that is refused today becomes allowed without that proof. ## Linked Issues or Issue Description Refs #15297, #20625 **What happened?** Restart-chaos wave L7 (seed 9107, local), task codex B5 TM2, run on master after #20625. A TM3 restart resumed the run (attempt 1). During the TM2 freeze the TS runtime lost its runner: `native_session_recovery_failed: runner_local_connect_failed: PRP command runner.drain timed out`. The executor saved `retryable_failure` with `recoveryMode: "exact_checkpoint_resume"`. After the delay, recovery verified the runner process stopped (`native.local_process_stopped`). The same run then resumed as attempt 2 (`native.process_start_requested`, `providerAttempt: 2`). The restored runner reported `turn.failed` with `provider_turn_lost_on_restore` (`recoverable: true`). No continuation was sent. The run failed with `native_provider_terminal_failed`, recovery stopped with `uncertain_provider_action` / `preserve_without_replay_v1`, and the task needed Retry. **Expected behavior** The run sends the one same-conversation continuation, exactly as it does after a restart claim, and finishes without Retry. **Steps to reproduce** `node cli/node_modules/tsx/dist/cli.mjs tests/restart-chaos/main.ts --env local --adapters codex,claude --workloads A1,B5,C1 --faults TM1,TM2,TM3 --time-age-hours 1 --concurrency 3 --tasks 6 --seed 9107` (timing-dependent: the drain timeout must land during an active turn). ## What Changed - New `server/src/services/native-runtime/scheduled-resume-continuation.ts`. It decides whether a same-run scheduled resume may continue a lost turn. Each of the three proofs comes from a durable record: 1. **The previous runner is stopped.** The latest process record of the run in `heartbeat_run_events` (`native.process_start_requested`, `native.process_identity_recorded`, `native.local_process_stopped`) must be `native.local_process_stopped`. Its `processPid` must equal its `processGroupId`, and neither the pid nor the group may be alive now. This is the existing `readNativeLocalProcessStop` check, read in the claim transaction before this attempt records its own `native.process_start_requested`. 2. **The attempt was admitted under the bounded budget.** The executor's claim moves `native_run_finalizations` from phase `retryable_failure` to `observed`. It charges a provider attempt, and the claim refuses any attempt above 3 (`native_session_retry_exhausted`). The decision also requires `1 <= attempt <= NATIVE_PROVIDER_RECOVERY_ATTEMPT_LIMIT`. 3. **It is the same provider conversation.** The saved `failure_detail` must show `recoveryMode: "exact_checkpoint_resume"`, `recoverable: true`, `providerSessionEstablished: true` and `checkpointExists: true`, with no `successorRunId` or `replacementDenied`. At run time the existing runtime guards still apply: the backend must recover the checkpointed session (`recovered`, not a continuity-break replacement), and the lost turn must equal the checkpoint's `activeTurnId` and the snapshot's interrupted turn. The provider kinds stay codex, acpx and opencode, with no compaction, goal control, held result or pending runtime request. - `native-session-executor.ts`: computes that decision in the coordinator claim. It passes `resumeInterruptedTurn` when either the restart claim is `resume_dead_runner` (unchanged) or the decision allows it. - `doc/execution-semantics.md`: describes the rule and the refused cases. **Cases that stay refused** (each has a test in `scheduled-resume-continuation.test.ts`): - a restart-recovery claim (it keeps its own existing rule); - a remote execution target; - a coordinator that is not `retryable_failure`, including a fresh run; - `recoveryMode` `bootstrap_retry` or `ambiguous_state`, or no saved failure detail; - a failure that is not recoverable; - no established provider session; - no checkpoint; - a recorded replacement (`successorRunId` or `replacementDenied`); - an attempt outside 1..3; - no stop receipt, a stop receipt superseded by a newer launch, a stopped process that is still alive, or a run that never had a process. The runtime-side refusals are unchanged and already covered by `native-session-runtime.test.ts`: real provider errors, historical error-null failures, and no restart permission. ## Verification - `cd server && npx vitest run src/services/native-runtime/scheduled-resume-continuation.test.ts`: 22 tests, covering the decision table and the stop receipt in embedded Postgres. - `cd server && npx tsc --noEmit` passes. - Live: not proven. An L7 wave on this branch (seed 9107) did not reproduce the drain-timeout path, so this pull request has unit and database tests only. In that wave the same cell (codex B5 TM2) needed Retry for a different reason: TM2 aged its restart-recovery claim lease before dispatch, and budget admission refused with `Native recovery no longer owns provider dispatch`. This pull request does not change that path. Four other tasks passed. Claude C1 TM2 rested blocked without a Retry button, which is a separate cleanup-quarantine issue. ## Risks - This allows one more path to send the same-conversation continuation. It is limited to local runs. It needs the same proofs as a restart claim, and it uses the attempt the resume already charged. It does not change the generation cap or `restartResumeKeepsAttempt`. - A rolling deploy reads `failure_detail` and stop events written by earlier releases. Those fields and events already have this shape, so an older saved failure is judged by the same rule. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with tool use (shell, file edits, test runs). Extended reasoning. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude <noreply@anthropic.com> |
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2150820bd8 |
perf(native): parallelize durability eligibility checks (#20646)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - A web server must prove that retained run state is durable before volume-free enrollment. > - The proof reads selected native sessions and validates their existing recovery receipts. > - Serial database checks made a valid inventory take 59.665 seconds. > - The signed preparation request has a 55-second limit. > - This pull request overlaps independent reads within fixed limits. > - The benefit is a faster eligibility check with the same preservation rules. ## Linked Issues or Issue Description Refs #20599 and #20601. A search found no duplicate of this remaining serial-read bottleneck. **What happened?** An actual full startup eligibility check returned eligible with no blockers in 59.665 seconds. Controller checks took 44.134 seconds and harness checks took 8.592 seconds. Signed preparation timed out at 55.002 seconds. **Expected behavior** A durable instance can complete signed preparation within its existing deadline. **Steps to reproduce** 1. Retain many native task sessions with database-backed controller checkpoints and valid filesystem-independence receipts. 2. Run the full startup eligibility check. 3. Observe serial checkpoint and receipt reads consume the signed request budget. ## What Changed - Check the existing terminal-controller metadata and checkpoint-existence predicate within the existing eight-reader source batch. - Validate harness independence receipts with at most four concurrent readers per existing page. - Stop admitting more harness reads after an invalid result or error. Join all started reads before returning or throwing. - Keep large controller, full-checkpoint and legacy archive reads serial. - Add real PostgreSQL regressions for overlap, concurrency limits and failure settlement. ## Verification - Genuine controller regression RED: all 16 checkpoint reads ran, but peak overlap was one. GREEN: 10 focused PostgreSQL controls passed, including bounded overlap, joined failures, active and warm handoffs, and failed-source preservation. The other 45 cases were filtered, not claimed as passes. - Genuine harness regression RED: overlap was one instead of four. GREEN: all three new PostgreSQL controls passed. Six existing authority, replacement and refusal controls also passed. - Final head `c059e031`: the same 10 controller and 9 harness PostgreSQL controls passed after rebasing onto current master and refreshing Runner artifacts. `node node_modules/typescript/bin/tsc --noEmit -p server/tsconfig.json` also passed. The first `pnpm exec` attempt could not start the compiler because package-manager bootstrap fetches failed; it is not counted as a typecheck pass. - `git diff --check` passed. - Actual private-process acceptance with deployed `8e4c5e81` dependencies and only the two changed owners: the complete check passed in 37.596 seconds with no blockers. Nine runs were running before and after; 1,750 sessions were selected. This is 17.4 seconds inside the unchanged request limit. The earlier complete baseline was 59.665 seconds on 1,745 selected sessions, so these are observed timings on a changing dataset, not a controlled exact speedup. No serving process was patched. - The first private candidate check stopped on a native-controller blocker in 18.216 seconds. A targeted follow-up found no blocker without any preservation or business write. Its cause was not identified. It is retained as a nonpass and is not a speedup result. - Current-head Greptile review is 5/5 with no actionable findings. Required CI is running: https://github.com/paperclipai/paperclip/actions/runs/42898013184. ## Risks - The scans now use more simultaneous database reads. Limits remain eight for controller source readers and four for harness proofs. - Invalid or failed proofs still refuse eligibility. All started readers settle before failure leaves the scan. - Previous-release state carries forward unchanged. This changes no stored shape, checkpoint identity, lease rule, schema, deadline or provider protocol. - Large legacy payload reads remain serial, so their existing memory bound is unchanged. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. This is a measured performance defect in the existing enrollment path. ## Model Used OpenAI Codex, based on GPT-6, with reasoning, code execution and parallel agents. The runtime does not expose the exact model variant or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes:` / `Closes:` / `Refs:` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change and contains no internal ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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4398a723c0 |
fix(native): settle tool callbacks and holds that a server restart orphaned (#20628)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work
> - Native runs send provider tool calls to the server as durable
semantic inputs. The server runs the tool and saves the result in the
controller journal
> - Close must prove that every admitted tool call has a saved result.
Otherwise it reports `native_session_settlement_incomplete` and the
runner holds a cleanup gate (`native_session_cleanup_quarantined`)
> - A server restart in the middle of a tool call leaves its input
without a result. The new controller asks the tool authority for a
receipt. Tools without a receipt (assigned app tools,
`connections_search`) return nothing, so the input stays pending forever
> - Runs that already failed this way kept no-replay holds for a turn
that had completed. The task stayed blocked with no Retry and no
continuation
> - Restarts are normal. Work that a restart interrupts must settle by
itself, not wait for a person
> - This pull request settles such a callback as interrupted, with an
unknown outcome, when its owner is provably gone, and settles the holds
that earlier releases left once their controller is gone. It never runs
the tool or the turn again
> - The benefit is that close drains after a restart, and tasks that
earlier releases blocked this way continue on their own
## Linked Issues or Issue Description
Refs #20572 (that PR fixed the presentation of this quarantine. Its
Risks section names this runner drain rule as a separate follow-up.)
Refs #20641 (it settles a resolved no-replay hold when a sibling action
saved the run's files. This PR covers a different case: the hold's own
recovery saved the files, and its run's turn completed. Both use the
same recovery receipt, `completedWorkspaceRecoveryCondition`.)
**What happened?**
A remote native run started an assigned app tool call. The server
restarted 3 seconds later. The new server adopted the runner, and the
provider turn completed about 9 minutes later. The tool call never got a
saved result. Close reported `native_session_settlement_incomplete` with
`runnerSuspended: true`, `providerDrained: false` and one pending
callback. The session quarantined, and the same-run recovery was refused
at admission. A second run showed the same shape with a
`connections_search` callback after a later restart.
The first run then had two resolved-but-blocked holds with
`preserve_without_replay_v1` and an unknown action outcome: the
cleanup-quarantine hold, and a continuation hold whose workspace
recovery saved the files. The task view said "Saved work recovered. Send
a message to continue." with no Retry and no continuation. The task
waits on a child task and stays blocked.
**Expected behavior**
After a restart, a tool call without a saved result settles
automatically. A durable receipt is replayed. Without a receipt, the
agent is told that the outcome is unknown. Close proves the drain, and
no cleanup gate is left. Holds that earlier releases left for a
completed turn settle without a person, and the task continues when its
own wait ends.
**Steps to reproduce**
1. Start a native run and call an assigned app tool.
2. Restart the server while the tool call runs.
3. Let the adopted turn complete, then close the session. Close reports
`native_session_settlement_incomplete` and quarantines. The task stays
blocked by the no-replay holds.
**Paperclip version or commit**
master at
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e3bc4ca798 |
fix(native): settle warm follow-ups that a restart left behind (#20631)
<!-- Write all pull request text in Simplified Technical English (ASD-STE100): short sentences, one instruction per sentence, simple approved vocabulary, and the active voice. --> ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Native warm runs on a remote sandbox continue the saved session of the previous run. Admission first proves what happened to the previous Runner. > - A deploy restarted the staging server while warm Runners were idle. Three follow-up runs then failed before provider work, each with a different refusal, and their tasks stayed blocked. > - The refusals asked for proof that a restart had made impossible. A restart is a product failure, so recovery must settle it automatically and keep the strict checks for real uncertainty. > - This pull request accepts the proof that the restart leaves behind, in three places: the warm owner on a replaced sandbox, the suspended Runner with an undelivered suspend receipt, and the restore hold of a run that saved nothing new. > - The benefit is that these follow-up runs start, and state saved by older releases carries forward without a migration. ## Linked Issues or Issue Description Refs #20567, #20346 **What happened?** On staging, a deploy replaced the webserver process at about 18:04 UTC on 2026-11-10 (lease controller boot `348ec0bb` on one deployment, then boot `3e84c195` on a new deployment that started at 18:04:16). Three runs of one Codex agent on Daytona failed between 18:08 and 18:15: 1. A warm follow-up got a newly created sandbox. The previous warm Runner stayed `ready` in its own retained sandbox. Live adoption denied it with `runner_state_identity_mismatch: prior_owner_terminal_state_indeterminate` (`remote-warm-session-recovery.ts:127`), because only a resumed sandbox may be adopted. The per-turn retirement path refused warm owners (`lifecycle_not_per_turn`). 2. A warm follow-up resumed the same sandbox and directory. The previous Runner had been suspended by the shutdown, but the controller stopped before it acknowledged the suspend result. The Runner kept its terminal fence (`pendingTerminalDelivery` for `runner.suspend`). The read refused it with `native_controller_recovery_missing_evidence:runner_not_settled` (`native-session-executor.ts:7032`). 3. A continuation into a fresh workspace failed with `remote_workspace_recovery_receipt_invalid` (`remote-workspace-recovery-attachments.ts:60`). Its predecessor had restored the committed save, failed before provider work, and kept a restore hold with no recovery receipt. Its saved reference named the snapshot it restored. **Expected behavior** After a restart, the next run continues. It retires a finished owner that nobody can adopt, reads a finished suspension, and skips a source that left no unsaved files. Real uncertainty still refuses with a named reason. **Steps to reproduce** 1. Run a warm native Codex turn on a reusable Daytona sandbox and let it commit. 2. Restart the server (deploy) while the Runner is idle. 3. Start the next turn. Get a new sandbox (case 1), or resume the same sandbox after the shutdown suspended the Runner (case 2). 4. For case 3, continue a task whose previous run restored the last save and failed before provider work, into a fresh workspace. **Paperclip version or commit** Staging before `2e3cbe57` (the runs predate that deploy). The gaps remain on `master` at `9b21dcbd`. ## What Changed - `inspectRemoteWarmSessionRecovery` returns `null` when this run's sandbox is `created` or `replacement`. Such a sandbox holds no Runner to adopt. The caller then uses ordinary admission. - `inspectFinishedPerTurnRunnerdOwner` also retires a **warm** owner on a remote sandbox runner when this run's sandbox is `created` or `replacement`. It uses all the existing proofs: terminal run, committed result, released coordinator lease, stopped or fenced controller, settled journal, and quarantine copies. Local warm Runners and resumed sandboxes keep the live path. - `restoreRemoteSuspendedRunnerCheckpoint` accepts a suspended Runner whose only open fence is its own undelivered `runner.suspend` receipt. The fence must name `runner.suspend` with lifecycle `suspended`, it must be the last controller command, and the restored journal must not name that command differently. A provider cleanup, unsent events, a turn's terminal fence or a warm transition still refuse with `runner_not_settled`. A later authorized Runner process reconciles the receipt, as the Runner already does. - `attachPreservedRemoteWorkspaceSnapshots` skips a source with a receipt-less restore hold when its saved reference names the exact committed snapshot that its own succeeded `remote_workspace_restore` loaded at the same epoch. Any other saved snapshot still needs the canonical receipt. - `doc/execution-semantics.md` describes the three rules. ## Verification - Red (unfixed code), each in the exact staging shape: - `native-recovered-owner-followup.test.ts` "retires a finished warm owner left behind by a restart when this run's sandbox is created/replacement" failed with `runner_state_identity_mismatch: prior_owner_terminal_state_indeterminate`. - `native-controller-recovery.integration.test.ts` "defers a remote warm continuation…" failed: live adoption rejected a created/replacement sandbox with the same error. - `native-controller-recovery.integration.test.ts` "reads a resumed sandbox's suspended Runner with an undelivered suspend receipt" failed with `native_controller_recovery_missing_evidence:runner_not_settled`. It reads through a sandbox runner that refuses paths outside the workspace base. - `workspace-recovery-preparation.test.ts` "decides a receipt-less restore hold of a source that restored_unchanged" failed with `remote_workspace_recovery_receipt_invalid`. - Green: the same tests pass. Focused files pass: `native-recovered-owner-followup.test.ts` and `native-controller-recovery.integration.test.ts` (104 tests), `workspace-recovery-preparation.test.ts` (85 tests). - Safety cases (strict checks stay strict): - A warm owner on a resumed sandbox is not retired. - A warm owner with an unsettled journal (pending command, unanswered tool input) stays held and names `retirement_refused=journal_…`. - A warm owner whose finalization lease is still held stays held. - A turn terminal fence, a provider cleanup, unsent events, a fence behind a later command, or a journal that names the command differently still fail with `runner_not_settled` and cache nothing. - A restore-hold source that saved another snapshot, whose restore did not succeed, or whose restore was at another epoch still fails with `remote_workspace_recovery_receipt_invalid`. - Neighbouring suites pass: `native-session-executor.test.ts`, `plugin-runner-release-resume.integration.test.ts`, `explicit-native-continuation.test.ts` and `native-harness-filesystem-independence-continuation.integration.test.ts` (1786 tests). The last one asserted the old warm refusal on a created sandbox. It now shows that the warm follow-up resumes the same provider session for the new run. - `npx tsc --noEmit -p server/tsconfig.json` passes. - `pnpm verify` returns exit 2, because a global doc input changed (`doc/execution-semantics.md`). Required CI supplies the broad coverage. ## Risks - Previous-release state: all three rules read state that earlier releases already save (lease outcome, coordinator rows, Runner state in the sandbox, journal commands, run results and workspace operations). Rows saved by older releases carry forward. No migration. - Case 1 starts a new Runner for a warm session whose old Runner may still exist, idle, in its retained sandbox. Its controller is gone and its result is committed, so it can accept no new commands. The provider session follows the existing resume-or-replace policy. - Case 2 trusts a suspend fence only in the exact shape that the Runner writes before it sends the result. Other fences still refuse. - After case 1, a warm follow-up resumes from its own warm checkpoint. That checkpoint carries no replacement policy, so a failed provider resume is still reported as `native_session_recovery_failed` and is not replaced. This is the existing warm behavior. - Case 3 skips a source only when it provably saved nothing beyond a committed snapshot. That snapshot stays in its own workspace. - The three tasks that already failed stay blocked until their next wake or a user message. This PR does not add an automatic continuation for a completed no-replay hold. A follow-up can add that. - `native-runner-restart-recovery.integration.test.ts` (runs only with a runner container) no longer probes a replacement sandbox, because that probe now retires the owner by design. - Not verified live on Daytona. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with tool use (shell, file edits, read-only browser access to staging). Extended reasoning enabled. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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24661683db |
fix(recovery): bootstrap a remote follow-up that a restart cut before its Runner launched (#20642)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - After a control-plane restart, restart recovery classifies each claimed native run: reattach a live Runner, resume from a checkpoint, or bootstrap again when durable records prove no provider work > - A follow-up run on a continued session gets a rebound admission checkpoint. It names the new run, but it keeps the previous turn's provider session ID > - Recovery read that copied provider session as this run's provider work. A follow-up killed after `native.process_start_requested` but before its remote Runner launched was classified `reattach_remote_runner` > - The reattach then had no Runner to find, failed with `native_continuation_requires_reconciliation`, and the task needed Retry > - This pull request stops the copied session from counting as this run's work, and keeps the existing durable proofs as the authority > - The benefit is that these restarts bootstrap again by themselves and do not repeat provider work ## Linked Issues or Issue Description Refs #20561, #20555 **What happened?** Two Daytona restart-chaos tasks needed a Retry click: - Wave `w-20261110T173243-s9202` t02 (claude C1, K2): the follow-up run was killed at `stage.asset.home`, after `native.process_start_requested`. Recovery chose `reattach_remote_runner`. Verification failed with `native.remote_runner_recovery_failed {stage: runner_state, reason: state_read_failed}` (`runner_remote_state_unavailable: exit=1`): `runner-state.json` did not exist because the Runner never launched. The storage fault window (ST7) had ended 30 s before, so it was not the cause. - Wave `w-20261110T174930-s9205` t04 (codex C1, RR1): the scheduled retry of a `process_lost` run was killed at `session.checkpoint.restore`, after `native.process_start_requested`. Recovery chose `reattach_remote_runner`. Verification failed with `native_remote_recovery_lease_mismatch: stage=runner_verification field=identity_run_id`: the local Runner identity belonged to the previous run, because this run's Runner never started. **Expected behavior** A run whose durable records prove that no Runner received a provider turn bootstraps again without a person. **Steps to reproduce** 1. Start a remote follow-up run on a continued session (for example, a comment after a completed turn). 2. Kill the server after `native.process_start_requested` and before the remote Runner launches. 3. Observe `reattach_remote_runner`, a failed verification and a Retry banner. **Paperclip version or commit** master close to `6d6b2d0e` (waves); still reproduced by the new tests on master `90dd864bff`. ## What Changed - `native-restart-recovery.ts`, no controller checkpoint for the run (`remote_runner_never_received_commands`): a follow-up with `sessionIdBefore` qualifies when it carries only its continued-session checkpoint, and a predecessor's settled Runner identity (`carriesInheritedRunnerIdentity`) no longer disqualifies it. A recorded process identity, a Runner-sent event, a provider event or a pending request still keeps the run held. - `native-restart-recovery.ts`, controller checkpoint exists: the existing Postgres proof (`nativeRunnerCheckpointRemoteBootstrapProof`) now also runs when the run carries only a rebound checkpoint whose provider session a settled earlier run of the same session saved (`carriesSettledPredecessorSession`). The copied provider session then does not count as this run's provider evidence. The controller checkpoint stays the authority: any turn command or turn event keeps the run held. - `doc/execution-semantics.md`: describe the rule. ## Verification - `server/src/services/native-runtime/native-runner-restart-recovery.integration.test.ts` (real Postgres): - "restarts a follow-up whose controller never saved a checkpoint (s9205 t04)" and the variant "with its predecessor's remote runner identity": red on master (`reattach_remote_runner`), green now. - "restarts a follow-up whose saved controller checkpoint proves no provider turn (s9202 t02)": red on master, green now. - Held cases stay held: own recorded Runner identity, a carried active turn, a provider session that no settled earlier run saved, a `turn.start` command, a projected `turn.started` event. - Whole file: 171 passed. - `npx tsc --noEmit -p server` passes. - The executor's existing `bootstrap_incomplete` path handles both shapes: a scoped root that belongs to the previous run goes through the existing prior-owner verification, and a root of this run restored from the controller checkpoint goes through `runnerdStateProvesIncompleteBootstrap` / `runnerdStateProvesNoRemoteProviderTurn`. ## Risks - A run with any recorded Runner process, Runner-sent event, provider event, turn command or pending request keeps today's reattach or hold. - A bootstrap claim charges one provider attempt, as today. The bounded limit (3) still applies. - No persisted shape changes. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, used through Claude Code with tool use and code execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-authored-by: Claude <noreply@anthropic.com> |
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ed5e7493bb |
fix(native): take back a lapsed lease held under the run's own restart claim (#20625)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - A native run holds an execution lease on its `native_run_finalizations` row. The owner renews it every 5 minutes. After a host sleep (or the restart-chaos time fault TM2), the stored lease looks lapsed although the owner is alive. > - #20474 lets the same owner take back a lapsed lease when no other actor recorded anything on the row. One of the checks is "`recovery_state` is null". > - Restart recovery writes `recovery_state` (`resuming_session`, `awaiting_runner_reattach` or `bootstrap_incomplete`) in the same update that grants the lease. The executor keeps that value until a result is accepted. > - So a run that a restart resumed can never take back its own lapsed lease. Renewal interrupts the turn, and failure settlement is refused with `native_session_lease_lost`. The run fails with `adapter_failed`, recovery holds it with `preserve_without_replay_v1`, and the user must click Retry. > - This pull request counts the claim's own record as untouched when the row still shows exactly that claim and nothing recorded since. > - The benefit is that a resumed run survives a later host sleep with no Retry. Every real takeover still fences the late owner out. ## Linked Issues or Issue Description Refs #20474 **What happened?** The zero-retry restart-chaos matrix (local wave L7, seed 9107: TM1, TM2, TM3 with 1 h aging) had 3 of 6 tasks that needed Retry. All three were Codex runs. In each run, a TM3 kill made restart recovery resume the run (`resume_dead_runner`, generation 2). The runner restored the conversation, reported `provider_turn_lost_on_restore`, and the same-conversation restart continuation started as designed. Then the TM2 fault aged every database time by one hour. The execution lease lapsed while its owner was alive. The run then failed with `native_session_lease_lost` (`adapter_failed`), and recovery stopped with `native_continuation_requires_reconciliation` / `preserve_without_replay_v1`. One run had already proposed its result and completed its turn. The Retry click worked every time. **Expected behavior** A run whose lease lapsed only because time jumped, and that no other actor claimed, continues with no Retry. This must also be true after a restart resumed that run. **Steps to reproduce** `node cli/node_modules/tsx/dist/cli.mjs tests/restart-chaos/main.ts --env local --adapters codex,claude --workloads A1,B5,C1 --faults TM1,TM2,TM3 --time-age-hours 1 --concurrency 3 --tasks 6 --seed 9107` ## What Changed - `server/src/services/native-runtime/native-execution-lease.ts`: the "untouched" part of `nativeExecutionLeaseHeldCondition` now also accepts the run's own local restart-recovery claim. All of these must be true: - the last `recovery_history` entry is that claim: same controller boot and generation as the row; - its disposition matches the current `recovery_state` (`resume_dead_runner` → `resuming_session`, `reattach_existing_runner` → `awaiting_runner_reattach`, `bootstrap_incomplete` → `bootstrap_incomplete`); - `recovery_request_id` equals the request that claim recorded. Any later actor appends a history entry (shutdown suspension, failure settlement), moves the state (`awaiting_evidence`, `blocked`), or replaces the owner, boot or generation. Each of these still fences the late owner out. All other untouched checks are unchanged. - `native-execution-lease-reacquire.test.ts`: new cases for each claim kind, a requested claim, failure settlement under the claim, and eight fenced variants. - `doc/plans/2026-11-09-explicit-native-lease-claim-tokens.md`: Step 1 lists the new rule. ## Verification - Red/green: `cd server && npx vitest run src/services/native-runtime/native-execution-lease-reacquire.test.ts`. Without the source change, 5 new cases fail (the three claim kinds, the requested claim, and failure settlement). With it, all 37 pass. - Related suites pass: `native-execution-lease.test.ts`, `heartbeat-restart-claim-lapse.test.ts`, `heartbeat-native-orphan-sweep-lease-race.test.ts`, `native-runner-restart-lease-renewal.integration.test.ts`, `native-runner-restart-preparation.integration.test.ts`. - `cd server && npx tsc --noEmit` passes. - Live: the same L7 wave (seed 9107, local) on this branch. The server log has 0 `native_session_lease_lost` (the baseline had 3). The two tasks whose cells failed this way in the baseline (codex C1 TM1, codex C1 TM3) now pass with no Retry. Two other tasks needed Retry for different causes, which this pull request does not change: codex B5 TM2 (a `runner.drain` timeout, then a same-run retry that may not continue a turn lost on restore) and claude C1 TM2 (`ACPX session is not open` on `turn.start` until the retry budget ran out). The L6 wave (seed 9106) also ran on this branch: 5 of 6 passed. Its one failure is `execution_recovery_budget_exhausted` and is not related to leases. ## Risks - The rule widens when an owner may take back its own lapsed lease. It applies only to local runs, before a result, with the same owner token, attempt, boot, pid, process start and generation. A claim that any other actor changed afterwards does not match. - Rows saved by earlier releases carry the same history entry shape, so a run claimed before a deploy is handled the same way. A deploy changes the boot, so the new process never takes back the old process's lease. - No schema change and no migration. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with tool use (shell, file edits, test runs). Extended reasoning. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude <noreply@anthropic.com> |
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fd6e71a7ff |
fix(native): restore a warm backup when its source sandbox is idle (#20627)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Native runs on remote sandboxes keep a warm sandbox and a verified harness backup so the next run continues the same provider session > - A run that starts while the previous run's workspace export is still saving gets a new (created) sandbox lease, because reuse skips an exporting sandbox > - When that run prepares the harness, it finds a backup but no recorded reusable lease, and it fails closed with `runner_harness_state_mismatch: backup_without_reusable_lease` > - #20278 accepted a destroyed source and a settled restore hold as retired backup sources, but not an idle warm source that is still `retained` for reuse > - This pull request accepts an idle warm source under the same proofs, claims it so it is never resumed again, and covers the resumed lease that the failed run leaves behind > - The benefit is that these recoveries continue the same session automatically instead of blocking the task ## Linked Issues or Issue Description Refs #20278 **What happened?** A monitor wake started about 90 seconds after the previous run on the same task finished. The previous run's warm sandbox lease was `retained` with policy `reuse_by_environment`, but its workspace export was still saving. Reuse skipped it and created a new sandbox. Workspace realization waited for the export (about 136 s) and restored the saved files. Then harness preparation found the previous run's backup (its lease stamp names this exact manifest, and no provider work followed it). The source lease was not destroyed and was not a restore hold, so the run failed with `native_session_recovery_failed: Error: runner_harness_state_mismatch: backup_without_reusable_lease` and the task was blocked. **What did you expect?** The run continues the same provider session. The idle source sandbox holds exactly the backed-up state, so restoring the backup into the new sandbox is safe. **Steps to reproduce** 1. Finish a warm native run on a remote sandbox. Its workspace export is still saving. 2. Start the next run on the same task before the export settles. 3. Reuse skips the exporting sandbox and creates a new lease. Harness preparation fails with `backup_without_reusable_lease`. 4. A retry resumes that new lease, which has no harness state, and fails with `resumed_unavailable`. ## What Changed - `native-retired-backup-source.ts`: an idle warm source is a third retired backup source. It must be `released` or `retained` with policy `reuse_by_environment`, its own run must be terminal and not the current run, and it must have no cleanup in flight, no restore hold or pending shutdown settlement, and no pending native workspace export. The backup stamp, single-owner chain, and later-provider-work checks still apply. - Before the restore, the idle source is claimed with a compare-and-swap on the checked row. The claim moves its `reusableSandboxLease` scope into a `reusableSandboxLeaseSuperseded` receipt. Reuse never resumes that older state again, and the next acquisition treats it as obsolete and destroys it. If a run resumed or changed the source first, the claim matches no row and the backup is not restored. - `environments.ts`: a cross-run reuse handoff now requires that the source row has no superseded receipt. The supersede claim and the handoff compete on the same row, so an acquisition that selected the source before the claim cannot resume it afterward. - The proof now rejects a backup whose source is the target allocation itself (`targetProviderLeaseId`). - `native-session-executor.ts`: a resumed lease whose sandbox has no harness state at all (`unavailable`) restores the backup under the same proof. This recovers the lease that the failed run left behind, so rows saved by older releases recover after deploy without a migration. - `doc/execution-semantics.md`: documents the idle-source rule, the supersede claim, and the resumed stateless lease. ## Verification - Red before the fix, green after: - `native-session-executor.test.ts` "restores a warm backup into a created lease only when an idle warm source finished its run and its export" failed with `backup_without_reusable_lease`. - "... a resumed lease never held the session and the warm source is idle" failed with `resumed_unavailable`. - `native-retired-backup-source.integration.test.ts` (real Postgres) "authorizes an idle retained/released warm source and claims it as superseded" failed (returned false). - Integration test "refuses a reuse handoff of a source superseded while its provider resume was pending" fails without the handoff guard and passes with it. - Safety rows stay refused: source run still running, workspace export pending, cleanup in flight, restore into its own allocation, stamp names another checkpoint, provider work after the backup, two host leases for one allocation, claim lost to another run, and a resumed lease that lost its own state. Existing destroyed-source and restore-hold rows are unchanged. - `cd server && npx vitest run src/services/native-runtime/native-session-executor.test.ts src/services/native-runtime/native-retired-backup-source.integration.test.ts src/services/native-runtime/remote-warm-session-recovery.test.ts` passes (1408 tests). - `npx tsc --noEmit -p server/tsconfig.json` passes. - `pnpm verify` exits 2 because a global CI input (`doc/execution-semantics.md`) changed. Required CI supplies the broad coverage. ## Risks - Previous-release story: no persisted shape changes. Lease rows saved by earlier releases carry forward. The new `reusableSandboxLeaseSuperseded` metadata key is additive. - The idle source is destroyed at the next acquisition for its workspace. Its state is the verified backup, which the restored lease now holds, so no work is lost. - Not covered: when the source cannot be proven retired or idle (for example a live owner or later provider work), the run still fails closed with the same named code. An automatic fresh-session fallback for that case is not in this PR. - The root trigger (reuse skips a sandbox while its export saves, then waits for that export) is unchanged. This PR does not change the reuse lookup. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - Claude Opus 5.5 (Anthropic), model ID `claude-opus-5-5`, with tool use and code execution in Claude Code. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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76c787fffc |
fix(runner): report monitor notes length limits (#20604)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Agents use task monitors to resume a future check. > - The monitor schema limits notes to 500 characters. > - The field description did not state the limit. Rejection showed only the schema path. > - This pull request adds the limit to the description and to safe length errors. > - Agents can correct notes before they retry a rejected call. ## Linked Issues or Issue Description Related prior fix: #16868. **What happened?** A native `set_task_monitor` call with 501 characters in `monitor.notes` failed with a path that ended in `notes/maxLength`. The error did not state 500. The schema already had `maxLength: 500`, but the field description did not state it. **Expected behavior** State the limit in the field description and in the rejection. Accept 500 characters. Reject 501 characters before dispatch. Preserve a saved monitor when a replacement is invalid. **Steps to reproduce** 1. Supply a future `monitor.nextCheckAt` and 501 characters in `monitor.notes`. 2. Read the native provider error. 3. Before this fix, it shows the constraint path without the maximum. **Paperclip version or commit** Reproduced on `7368a0b15c2f02107778a961144d86e2eb59a952` in a Linux source checkout, with Node 25.9.0 and Rust 1.97.1. ## What Changed - Use one local value for the published notes limit and its description. The server test checks agreement with the persisted shared validator. Keep the standalone Runner package boundary. - Read the numeric maximum from the authorized JSON Schema validation error. Keep submitted values private and preserve the 512-byte feedback bound. - Test the published schema and real bridge dispatch path at 500 and 501 characters. Test saved contents and rejection without monitor changes with real PostgreSQL. - Refresh generated contracts and document the limit. - Sync two SDK proof lock identities after the reviewed master lock refresh in #20615. This fixes the remaining CI proof mismatch. Keep compiler, parser, Zod, and all rejection checks unchanged. ## Verification - Final head: `bac60234ab3a8fc7043a90c7f9c81b02e250428b`. - Red: the server regression failed because the field description omitted `500`. The Rust regression failed because the error omitted `maximum 500 characters`. - Local passes after the final base update: 44 PostgreSQL monitor/scheduler tests, 14 real-source Rust bridge tests, 11 cache/Docker guard tests, and 56 SDK proof tests. Runner TypeScript build and generated contract checks pass. - The focused Rust check compiles the actual source in a small Cargo workspace. The full Rust CI suites also pass on Linux and Windows. - Final-head [PR CI run](https://github.com/paperclipai/paperclip/actions/runs/42881633978) passes. This includes typecheck, build, Runner support, Runner Rust and Vitest, server tests, serialized tests, and all eight e2e shards. - Final-head [Windows Rust run](https://github.com/paperclipai/paperclip/actions/runs/42881633419) passes. - Greptile: 5/5 on the final head, with no open findings. There are 61 successful checks and five conditional skips. The separate Paperclip Review remains queued; its comment says work is paused. No CI or test check is pending or failed. - `pnpm verify` returned exit 2 and selected broader CI. The full local suite was not run. Final-head CI supplies that coverage. Earlier failed attempts were repaired and are not counted as passes. ## Risks - Low risk. The existing 500-character bound, scheduling semantics, and permissions stay in place. - Length feedback uses only a schema path and numeric bound. It does not print submitted text. - The Runner binary and tool contracts must reach an instance for the new guidance to apply. This PR does not deploy or merge. ## Model Used OpenAI Codex, GPT-6, with reasoning, tool use, and code execution. The runtime does not expose a more specific model ID or context window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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19e938415a |
fix(runtime): omit Codex refresh handoffs from backups (#20614)
## Thinking Path > - Managed ACPX Codex retains its final refresh after provider exit so Core can save it. > - Shutdown saves a checkpoint before Core removes the live credential handoff. > - Checkpoint profiles must exclude the handoff while retaining resumable session history. ## Linked Issues or Issue Description Follow-up to #20580 and its credential-backup review finding. Refs #20457. ## What Changed - Exclude `auth-refresh.json` and `auth-refresh.json.tmp` from the shared Codex checkpoint profile, covering native and ACPX homes. - Extend real checkpoint-copy coverage to ACPX Codex, both handoff filenames, and native Codex. Keep the live files and session history intact. ## Verification - A real ACPX checkpoint-copy test failed before the exclusion fix; Grok passed. - Five targeted real-copy/profile tests pass, including after applying the change to current master. - `git diff --check` and local secret/PII diff review pass. - Full regression coverage runs in GitHub CI at the maintainer's request. No live provider credentials were used. ## Risks - Two entries added to an existing exclusion list; no runtime lifecycle, schema, persisted identity, or session format changes. Saved sessions remain readable. Existing backup restoration uses the same exclusion profile. - Provider credential cleanup still follows final writeback; excluding a backup entry does not delete the live handoff. ## Model Used - OpenAI GPT-6 through Codex, with tool-assisted implementation and verification. The runtime does not expose a more specific model ID or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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17136a6c25 | fix(runtime): persist managed Runner credential refreshes across execution targets (#20580) | ||
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85dec04677 |
fix(native): validate active controller durability during eligibility (#20601)
## Thinking Path > - Paperclip controls agents while their work runs outside the web server. > - A web replacement must retain each controller's durable recovery state. > - Modern controllers commit that state to the database before sending work. > - Their local controller file is only an external-persistence identity marker. > - Disk eligibility still required recovery metadata that can arrive after a run finishes. > - This pull request verifies the complete active database authority instead. > - It also bounds concurrent source reads so a large history does not require serial network waits. ## Linked Issues or Issue Description Refs: #20311, #20584, #20599. **What happened?** A live native run can have a complete database controller checkpoint and no terminal session snapshot yet. The disk-preservation check treats its local identity marker as a local-only obligation. The check also resolves selected sources one at a time. **Expected behavior** Accept a complete, bound active recovery authority. Refuse missing, partial, stale or foreign evidence. Keep all execution and enrollment guards. **Steps to reproduce** Use the new active-controller regression. Start a real Runner controller with the database checkpoint writer. Keep the business run active and omit its terminal snapshot metadata. The previous check returns a local obligation even after the full checkpoint commits. ## What Changed - Require the exact external-persistence marker and a complete decoded encrypted checkpoint for active runs. Match run, agent, task, session, Runner and workspace identities. For warm reuse, also permit an older marker only when its full older checkpoint matches that marker and its exact earlier successful run has a committed accepted result in the same company, agent, task, session, Runner and workspace. Keep the current live writer mandatory. Read the marker again after validation. - Accept that proof only with its fenced live writer and task binding, or the existing exact saved recovery snapshot. The saved-snapshot path still requires the full active journal. - Keep newer remote workspace authority strict. A malformed reference cannot fall back to an older prepared reference. Conflicting plugin task authority remains blocked. - Resolve selected sources at most eight at a time for read-only eligibility. Join every started reader before reporting an error. Keep source order, pagination, predicates and all write paths unchanged. Offline migration and prestaging still resolve sources one at a time. - Add real PostgreSQL regressions for active durability, partial and foreign state, expired ownership, previous prepared-reference state, post-result state and reader failure joining. ## Verification - Canonical Node24 preflight passed in74.2s. It built the current Runner inputs and published the cache. No shared Cargo target or hosted database was used. - Genuine active regression RED: the previous check returned true when false was required. The real checkpoint writer had committed the complete authority and replaced the local file with the Runner marker. Treatment passed, including the refusal controls. - Genuine source-reader RED: sixteen retained pointers used one reader at a time. Treatment used at most eight and joined all eight when the first reader failed. With a controlled20ms reader delay and real PostgreSQL selection, the small fixture changed from497.5ms to85.3ms. This is a bounded-concurrency proof, not a production speedup measurement. - All54 cases in the affected controller migration integration file passed in76.07s, with no skips. These include existing failed-controller, archived-controller, inline database and previous-session preservation cases. - Server TypeScript passed. The normal merge of current master kept both changed files byte-for-byte identical to the54-case proof. Final post-merge focused checks passed two of two in14.83s (52 other cases intentionally unselected); server TypeScript and module boundaries passed. Comment-only correction743 removed all new code comments required by CONTRIBUTING. A later warm-reuse regression reproduced the remaining false blocker through the real Runner rotateRunIdentity API. The bounded treatment uses one exact older-run lookup and full old/current checkpoint validation; it adds no Runner format, release or lineage service. Final normal-merge head `c62d6eb1755cf99b6def9563ba69854dba17de42` includes the new0459 baseline. All three focused PostgreSQL cases passed in21.37s (52 existing cases intentionally unselected); fresh server TypeScript and module boundaries passed. The prior54-case regression evidence is retained; no full matrix was repeated. - `git diff --check` passed. Final-head CI passed:56 checks succeeded and4 were skipped; the separate Paperclip Review advisory was still queued. All required test, build, typecheck and ci/verify gates passed on c62. [Final required workflow](https://github.com/paperclipai/paperclip/actions/runs/42868279612). Fresh [Greptile review](https://github.com/paperclipai/paperclip/pull/20601#issuecomment-6774537057) is5/5 on exact head `c62d6eb1755cf99b6def9563ba69854dba17de42`, with no open review threads. ```sh node scripts/agent-preflight.mjs --skip-rust-debug node --import ./cli/node_modules/tsx/dist/loader.mjs packages/db/src/test-postgres-command.ts pnpm exec vitest run server/src/services/native-runtime/native-controller-migration.integration.test.ts --disableConsoleIntercept pnpm --filter @paperclipai/server exec tsc --noEmit ``` ## Risks - This reports preservation evidence. It does not grant attachment, execution, replacement or enrollment authority. The normal live-owner and admission gates still apply. - A partial old or current checkpoint, stale local controller state, identity mismatch or uncertain owner stays blocked. Warm-marker proof also rejects a foreign agent, newer source, later completion, rejected result, per-turn scope or expired current writer. No source, checkpoint, session, lease, archive or provider state is changed by the check. - The eight readers add bounded database concurrency during an explicit eligibility request. There is no new background scan, cache, row filter or timeout change. Live enumeration time still needs deployed measurement. - The plugin task-lease branch uses the producer's environment lease row ID, as native-session-executor and existing diskless adoption coverage require. A direct active-eligibility positive for that plugin branch is a coverage limit; existing mismatch/conflicting-authority checks remain. The advisory found no must-fix defect, and this does not change the current tested revision. - Saved formats and terminal migration behavior remain unchanged. Older prepared workspace references remain supported. A fully saved result can still pass before the run-status update, but its entire active checkpoint must decode. - The observed staging run finished naturally and became valid on the existing terminal path during investigation. That observation is not deployed verification of the new active path. ## Model Used OpenAI GPT-6 (Codex), with reasoning, tool use and code execution. This runtime does not expose a more specific model ID or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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1b7ec13acb |
perf(native): default remote sandbox runs to a warm, reusable sandbox for measured harnesses (#20048)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work
> - Agents can run in remote sandboxes (Daytona), where each turn needs
the task's workspace and a runner inside the sandbox
> - With a default environment, every remote turn got a brand-new
sandbox: the whole workspace was uploaded again and a new runner
started, even for a follow-up comment
> - In a paperclip-sized workspace that made a follow-up take 30 s to
first token, against 8–10 s with a reusable warm sandbox
> - This pull request makes an agent that never chose a lifecycle run
warm on a sandbox for the measured harnesses (Codex, OpenCode, Claude),
so a follow-up keeps its sandbox, runner and workspace
> - The default applies only where warm can work: a sandbox provider
that keeps reusable leases, and a managed AI account that supports a
warm session. Everywhere else the run is per-turn, exactly as before
> - The benefit is fast remote follow-ups by default, without
re-uploading a large repository every turn
## Linked Issues or Issue Description
**What happened?**
On Daytona, with a fresh paperclip clone as the project workspace, a
follow-up comment took 30 s to its first token. The run log showed
`environment: fresh/created` on every follow-up. It spent 13.3 s in
`workspace_sync.transfer`, a full upload into the new sandbox, and 8–9 s
in `runner.session.resume`.
**Steps to reproduce**
1. Create a Daytona environment with the defaults: lifecycle inherited,
lease reuse off.
2. Run a Codex task in a large repository, then post a follow-up.
3. The follow-up gets a new sandbox, uploads the whole workspace again
and starts a new runner.
**Expected behavior**
A follow-up on the same task reuses the live sandbox, its runner and its
workspace (plan rule 2: no full re-upload per turn).
## What Changed
- **One rule for the default.** `defaultsRemoteSandboxRunToWarm`
(`native-runtime/native-warm-capability.ts`) decides the remote-sandbox
warm default for both the lease (environment view) and the runner
(native session policy), in one vocabulary (runtime backend plus ACPX
agent). It is applied only when no lifecycle was chosen anywhere:
admitted session, environment `runnerLifecycleMode`, or agent
`lifecycleMode`. It holds only when:
1. the harness is measured (Codex, OpenCode, ACPX Claude);
2. the sandbox provider keeps reusable leases (Daytona, CreateOS and
boxd declare them; E2B, Modal and the built-in `fake` do not); and
3. with a managed AI account, that harness supports a managed warm
session (`supportsManagedNativeWarmSession`: Codex).
- **The harness resolves as the runtime resolves it.**
`resolveWarmProviderSelection` uses
`resolvePaperclipRunnerProviderProfile`, so an omitted `provider` is
Codex and ACPX without an agent is Claude, in both decisions. A config
the runtime would refuse gets no default.
- **Lease side** (`runner-environment-lifecycle.ts`,
`environment-run-orchestrator.ts`): for an eligible run only, the
orchestrator asks the provider before acquisition
(`providerSupportsReusableLeases` in `environment-runtime.ts`: the
acquisition rule, one registry lookup for a plugin provider, no
worker-ready wait). With support, the run-scoped view sets `reuseLease:
true` and forwards the warm idle window to the provider's auto-stop. The
shared environment is never rewritten. Every other run resolves exactly
as on master, without the probe.
- **Runner side** (`native-lifecycle.ts`, `runtime-selection.ts`): the
native policy applies the same rule to the acquired lease
(`reusableLeaseConfigured && effectiveCapabilities.reusableLeases`). If
acquisition downgrades the lease anyway, the run falls back to per-turn;
a default never produces
`runner_warm_environment_requires_reusable_lease`.
- **Idle window.** The remote default uses the window the environment
view forwards to the provider: an inheriting environment's
`runnerIdleTimeoutMs`, then the agent's `idleTimeoutMs`, then 5 minutes.
The sandbox execution target now carries the environment's window
(`runnerIdleTimeoutMs`, an optional field in `adapter-utils`'s execution
target) so the runner and the provider auto-stop agree. An explicit warm
choice and the local default are unchanged.
- Unchanged: explicit agent choices, environments that pin a lifecycle,
plugin-task environments, admitted sessions (`persistedPolicy`), and
local behavior.
- `tests/restart-chaos`: the vCPU budget check counts `--daytona-inherit
--lifecycle default` sandboxes as retained, because they now default to
warm.
- `doc/plans/2026-11-08-large-workspace-speed.md`: the measurements, the
ranked waits, and the gate.
## Verification
- Unit and integration tests, one per rule:
- Rule 1 (provider gate): `native-lifecycle.test.ts` (ephemeral lease →
per-turn), `runner-environment-lifecycle.test.ts` (no reusable leases →
environment unchanged, no warm window),
`environment-runtime-reusable-lease-probe.test.ts` (`fake`, an
undeclared plugin, a declared plugin whose worker does not verify the
reuse methods, and a plugin without a running worker read false),
`runtime-selection.test.ts` ("defaults an agent without a lifecycle on
...": reusable → warm/keep_running; reuse configured on an unsupported
provider → per_turn/destroy_after_turn; ephemeral → per_turn),
`environment-run-orchestrator.test.ts` (probe result decides
`reuseLease` and the forwarded window).
- Rule 2 (explicit configuration wins): explicit per-turn agent, pinned
environment, admitted session, configured `idleTimeoutMs`, managed
Claude per-turn, managed Codex warm; the orchestrator does not probe
when a lifecycle is explicit.
- Rule 3 (omitted provider): `{}` resolves to Codex in the environment
view; `runtime-selection.test.ts` "agrees with the environment view's
lease for ..." feeds the environment view's lease into selection for
Codex, a provider-less Codex agent, OpenCode, ACPX Claude, ACPX without
an agent, and Copilot (per-turn), and checks both decisions agree. A
plugin-task target stays out of the default.
- The two suites that failed on the previous head
(`runtime-selection.test.ts`,
`workspace-recovery-preparation-dispatch.test.ts`) pass locally.
Locally, 6 connector-skill cases in `runtime-selection.test.ts` fail
with `ENOENT .claude/skills/slack/SKILL.md` because this checkout is a
nested worktree; they do not touch this change and pass in CI.
- End-to-end check of this default on Daytona (before the gate was
added; Daytona keeps reusable leases, so the gate does not change this
path): a user-default environment (lifecycle inherited, lease reuse
unset, `--daytona-inherit`), a fresh paperclip clone, built from the
image's source revision with this change (branch measure/remote-warm).
| | Before (per-turn sandbox) | After (this change) |
|---|---|---|
| Follow-up, Codex | 30.4 s | 7.6 s |
| Follow-up, Claude | about 30 s | 11.0 s |
| First follow-up after an idle K1, Codex | 45.9 s | 20.3 s |
| First follow-up after an idle K1, Claude | 38.3 s | 18.3 s |
The run-log reuse records show the follow-ups reusing the workspace,
environment, runner and provider session, with no
`workspace_sync.transfer`. First turns still upload the workspace once
(14.8 s and 26.1 s). Every sandbox was cleaned up.
- Daytona restart chaos wave (K1/K2/K4 with a mid-run comment,
inheriting environment, agents with no lifecycle, runner image built
from this branch): wave `w-20261110T171438-s20048`, seed 20048, on
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c37eacbee3 |
fix(native): Retry re-finalizes a saved result that ran out of finalization retries (#20578)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work
> - Native runs save an accepted result. Then a finalizer applies that
result to the task.
> - Finalization has its own budget of 3 failed attempts (#20555). When
the budget runs out, the coordinator goes to `terminal_failure` with
`native_finalization_retry_exhausted`.
> - For a provider-succeeded run, the task then rests `in_review` with a
board recovery card. The task shows "resolved" and offers no Retry. The
user is stuck.
> - The ordinary Retry is also wrong here: it starts a new provider run,
which repeats work the agent already finished.
> - This pull request adds two things. First, contention failures on
such a result get two longer automatic delays before the board gets the
task. Second, when the state is still exhausted, the task offers Retry,
and that Retry applies the same saved result again.
> - The benefit: fewer tasks need a Retry, and when one does, Retry
works and does no duplicate provider work.
## Linked Issues or Issue Description
Refs #20555 (it names this gap under Risks).
**What happened?**
In restart-chaos wave `w-20261110T044338-s20385`, task t03 ended with a
succeeded run, an accepted result, and a coordinator in
`terminal_failure` / `native_finalization_retry_exhausted`. The issue
stayed `in_review` with a board-owned `active_run_watchdog` card and
`canRetry=false`. #20555 stopped the early exhaustion. A real exhaustion
still leaves the same stuck state. Coordinators that older builds
already left in this state are stuck the same way.
**Expected behavior**
Transient finalization failures recover by themselves when that is safe.
When they do not, the task offers Retry. That Retry re-finalizes the
saved result. It does not start a provider run and does not charge a
provider attempt.
**Steps to reproduce**
1. Let a native run save an accepted result and end `succeeded`.
2. Make each finalization of that result fail until the budget of 3 runs
out.
3. Before this fix, the task presentation is `resolved` with
`canRetry=false`, and the board card has no action that applies the
result. The new test
`server/src/__tests__/native-exhausted-finalization-retry.test.ts`
reproduces this.
**Paperclip version or commit**
master at
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1c78d023c6 |
perf(native): narrow backup eligibility to selected runs (#20599)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Server replacement checks whether retained native sessions still depend on local harness data. > - This check joins selected task sessions, runs, backup stamps, and durable backup records. > - PostgreSQL can start from backup leases and scan an issue's full run history before applying the selected-run condition. > - A measured instance spent 9.56 seconds in that selector and exceeded an 8-second statement limit. > - This pull request selects the exact current run identities first, then applies the existing lease and backup checks. > - The same receipt validation and eligibility decisions remain in place. ## Linked Issues or Issue Description **What happened?** Startup eligibility timed out while selecting native harness backup obligations. The plan scanned historical runs for each lease before checking the task session's selected run. **Expected behavior** The selector should use the selected run identities without scanning unrelated run history. It must return the same session, scope, company, and receipt flag. **Steps to reproduce** Use a database with retained native task sessions, many historical runs on the same issues, and version-two backup stamps. Run startup eligibility with an 8-second statement timeout. The lease-first plan can exceed that limit. **Paperclip version or commit** The local baseline is `d0c30e69a9cea912db7c5290c5d585fdd63ec228`. **Deployment mode** Self-hosted server with PostgreSQL. ## What Changed - Keep `AS MATERIALIZED` as an intentional join-order fence: build selected task-session and last-run identities before joining backup leases. - Keep only narrow identity columns in that materialized set. Read the JSON receipt flag through the selected run's primary key after the lease and current-backup filters, so profiles for unrelated identities do not widen the intermediate rows. - Preserve company and agent bindings, exact normalized-session text comparison, current-backup exclusion, scope deduplication, ordering, and the 100-row page. - Add real PostgreSQL regressions for full ordered-row equivalence, nullable JSON receipt flags, malformed and uppercase session bindings, cross-company rows, duplicate stamps, page tails, and invalid receipts. - Existing saved state carries forward under the same validation rules. No schema or persisted identity changes are required. ## Verification - The two focused PostgreSQL regressions passed locally. Command: `pnpm exec vitest run server/src/services/native-runtime/native-harness-backup-obligations.integration.test.ts --silent`. - Worktree preflight passed. The focused regressions (2/2) and `node server/scripts/typecheck-layers.mjs` passed on final head `c739353b22` after rebase. - One bounded read-only pair on PostgreSQL 17.11 returned the same 54 complete ordered rows: baseline 9,564 ms, candidate 298 ms (32.1 times faster). The plan changed from lease-to-issue-history scans to selected-run primary-key lookups and a hash join. - A synthetic PostgreSQL 18.1 fixture already chose an efficient baseline plan. Across five alternating warm pairs, its median was 104.6 ms before and 109.4 ms after. This neutral control used 22,800 runs, 14,100 leases, 3,173 task sessions, and 5,460 backups; all 54 complete rows matched. The empty control also matched. - These measurements cover the selector. A later read-only assembled-call probe on a newer serving release substituted only this selector: the selector took 544 ms for 54 rows, while the full eligibility call took 56.1 seconds and still reported a controller migration blocker. Other checks remain outside this PR; this PR does not claim to bring the whole request within its deadline. - Required CI and fresh review results will be recorded here before handoff. ## Risks - Materialization adds a selected-identity pass. Databases that already choose an efficient plan may see little benefit, as the local neutral control shows. - Pagination and receipt validation must stay exact. The regression crosses the 100-row boundary and checks that an invalid final scope still blocks eligibility. ## Model Used OpenAI Codex, GPT-6 family. The exact model ID and context window are unavailable in this session. The agent used reasoning, code editing, shell execution, PostgreSQL diagnostics, and GitHub tools. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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be0d100a8b |
fix(native): settle cleanup-gate refusals after a completed turn without a dead-end Retry (#20572)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work
> - Native runs execute a provider turn, then close the provider session
and prove it stopped
> - When close cannot prove that the old runner, provider and tools
stopped, the runner holds a cleanup gate
(`native_session_cleanup_quarantined`) that refuses the next session on
that task
> - A run finished its provider turn and saved its work. A server
restart had left one tool callback without a saved result, so close
could not prove the drain, and the gate refused the run's own same-run
recovery 30 seconds later
> - The task then showed "Couldn't finish this attempt" with a Retry
button, but the retry route refuses this error code with 409. The saved
error text told an operator to act
> - This pull request makes the task projection, the execution blocker,
the executor and the retry route agree, and replaces the operator text
with plain wording
> - The benefit is that finished work no longer looks like a failed
attempt, and the UI never offers a Retry that the server refuses
## Linked Issues or Issue Description
**What happened?**
A remote native run completed its provider turn and saved its comments
and documents. A server restart during the turn left one semantic tool
callback without a saved result. Session close then reported
`native_session_settlement_incomplete` (runner suspended, provider drain
unproven), and the runner kept an operator-required cleanup gate. The
same-run disposition recovery was refused at admission, and the run
ended `failed` with `native_session_cleanup_quarantined`.
**Expected behavior**
The task should show its real state (here, waiting on a child task). It
should not show a failure banner or a Retry that the server refuses. No
text should ask an administrator to act.
**Steps to reproduce**
1. Start a remote native run and restart the server while a tool
callback runs.
2. Let the resumed turn complete without a semantic result, so a
same-run recovery is scheduled.
3. Observe the refusal at admission, the "Couldn't finish this attempt"
banner, and a Retry that returns 409.
**Paperclip version or commit**
master at
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84007892e9 |
refactor: move AGENTS.md section detail to docs and rules, add a bug-fixing section (#20585)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - `AGENTS.md` is the instruction file that each human and AI contributor reads before a change > - Pull request #20557 shortened the file, but several sections still held detail that applies to only some changes > - The scoped-rules section told agents to read each matching rule in full, and most changes match five rules > - The core engineering rules mixed three product invariants with process conventions > - This pull request moves that detail to the docs and to scoped rules, and adds a section on how to fix a bug > - The benefit is a 211-line file that states what applies to every change and points to the rest ## Linked Issues or Issue Description Refs #20557 **Issue type** Outdated or unclear contributor documentation. **Where is the issue?** `AGENTS.md` at the repository root, and `rules/`. **What's wrong?** - The scoped-rules section made agents read the full body of each matching rule before a change. The rule bodies total about 47 KB. - Sections 4, 6, 8, 9 and 10 repeated detail that belongs in `doc/DEVELOPING.md`, `doc/DATABASE.md`, a route rule, `DESIGN.md` and `CONTRIBUTING.md`. - Section 4 had a database reset command for `data/pglite`. That directory does not exist. - Section 5 had seven rules. Four of them were process conventions or path-specific detail. - The file did not say how to fix a bug. **Suggested fix** Make the rule headers the index. Move section detail to the document or rule that owns it. Keep only the three invariants in section 5. Add a bug-fixing section. ## What Changed - The scoped-rules section now tells agents to list the rule headers with one `grep` command. Agents read a rule body only for a design decision in its area, when the description is not sufficient, or when a reviewer cites it. - `rules/README.md` says that each `description` must state the required behavior in one sentence. - `rules/pull-request-review.mdc` has a description that states its requirements. - Section 4 (dev setup) and section 11 (pull requests) now point to `doc/DEVELOPING.md` and `CONTRIBUTING.md`. - The schema change workflow moved from section 6 to `doc/DATABASE.md`. - The API and auth expectations moved from section 8 to the new `rules/api-route-expectations.mdc`. - Section 9 links to `DESIGN.md` for design rules. `AGENTS.md` no longer tells contributors to run `pnpm check:token-gates`. - Added section 10, "Fixing a Bug": reproduce the error, write a failing test, write the fix, see the test pass, and verify the fix. - Section 5 now has three rules: company scope, contract synchronization, and the control-plane invariants. - The company-scope exceptions moved to the new `rules/company-scope-exceptions.mdc`. - Removed the strategic-docs rule. The plan-doc convention moved to the repo map. The artifact rule moved to section 7. - Removed rule 7. Five code comments that cited `AGENTS.md §5.7` now cite `rules/data-paths.mdc`. - Regenerated the SDK public source pin, because one of those comments is in `packages/shared/src/crash-points.ts`. - Added both new rules to `.greptile/files.json`. - The API route rule applies only to routes that read or write company data. Its status code list is a list of common codes. - The company-scope rule lists the sidebar company order as an instance-wide exception. - The `honeycomb-tracing` skill now points to `rules/data-paths.mdc` for the Telemetry workflow. ## Verification - Open `AGENTS.md` and confirm that each link resolves. A local script checked this. - Run `grep -E '^(description|globs|alwaysApply):' rules/*.mdc` and confirm that each rule prints a description. - Run `node tests/runner-e2e/source-sdk-public-inputs.mjs <HEAD> --check`. It passes locally. - `packages/shared/src/crash-points.test.ts` passed locally before the rebase onto `master`. - Five source files changed in comments only. No other test suite ran locally. ## Risks - An agent that reads only rule descriptions can miss a detail in a rule body. Reviewers still apply the full rules. - Pull requests and the definition of done are now sections 11 and 12. Sections 1 to 9 keep their numbers. - Dated plan documents under `doc/plans/` still cite `AGENTS.md §5.7`. They are historical records. - Pull request #20565 also changes `AGENTS.md`. The second one to merge needs a conflict fix in section 1 and section 2. ## Model Used - Claude (Anthropic), in Claude Code with tool use. - `claude-fable-5-2`. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [ ] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude <noreply@anthropic.com> |
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2e3cbe57a4 |
fix(native): preserve parked Runners across controller restarts (#20586)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Native execution parks a released sandbox Runner for a later turn. > - The warm idle timer detaches Core and leaves Runner retention to the host. > - Controller shutdown instead stops recently parked Runners through checkpoint cleanup. > - This makes reuse depend on whether the idle timer fired before shutdown. > - This pull request uses the same detach operation for idle expiry and shutdown. > - The benefit is consistent Runner retention without a new retention or recovery mechanism. ## Linked Issues or Issue Description Fixes: #20012. Related: #20005 unified cached and adopted process reuse. Closed #19975 included this shutdown change within a broader retention proposal. ## What Changed - Detach confirmed released entries during controller shutdown. Keep busy, unreleased, and close-marked entries on the existing cleanup path. - Share the detach operation with idle expiry and cached-owner handoff. - Record that a local handle has started detaching. Later cleanup cannot fall back to stopping its Runner after a partial detach failure. - Preserve explicit environment deletion, release proof, admission, and process-reuse checks. - Add Codex and Claude restart, detach-failure, and environment-deletion regressions. Add real Runner adoption cases after the restart sweep, including managed GitHub rebinding. - Document the lifetime rule and make the shutdown warning cover both detach and checkpoint failures. ## Verification - Final source revision: `e4bb6ecbd7`. Local environment: macOS arm64, Node 26.12.0. - New controller-restart and detach-failure tests fail against unchanged master: 4 expected failures. Old shutdown calls close or reports success instead of reporting detach failure. - Focused executor tests: 22 passed. - Full native session executor suite: 1,328 passed. - `cd server && node scripts/typecheck-layers.mjs`: passed all source and test layers. - `node scripts/check-module-boundaries.mjs` and `git diff --check`: passed. - Manual diff review and added-line credential/PII scan: passed. - `cd server && node ../node_modules/vitest/vitest.mjs run src/services/native-runtime/plugin-runner-release-resume.integration.test.ts --bail=1 --reporter=verbose`: 14 passed on this revision. This includes new Codex and Claude restart cases and managed GitHub rebinding. - Failure history: an earlier concurrent run had 4 passes and 10 failures. Its first failure was the existing Claude cached case exceeding 60 seconds. Later cases encountered a leftover prototype spy, recursive calls, and startup timeouts. No source changed before the passing full rerun. A clean worktree of unchanged master (`e01fe7f84a`) passed all 11 original cases. The first timeout's exact cause remains unknown; the later pass does not establish that cause. - Standard Greptile review: 5/5 on `e4bb6ecbd7bd965b5f56507d2c42c580e8a1d547`, with no actionable findings. - `node scripts/local-verify.mjs --explain` returned exit 2 because the execution-semantics document requires broad CI. Required CI will supply broad typecheck, test, and build coverage. - A hosted deployment and an actual controller process replacement have not been run. The added integration cases exercise the shutdown sweep and a new adopting transport against a real Runner. ## Risks - SIGINT and SIGTERM preserve confirmed parked Runners, including ordinary service stops. The host still owns eviction and retention. - Detach failure retains a fenced local owner and reports failure. Core does not infer permission to stop the Runner from that failure. - Reuse remains conditional on current admission, process configuration, and host availability. - No persisted schema, checkpoint format, launch identity, or migration changes. State from the previous release uses the existing adoption or verified restore paths. ## Model Used - OpenAI Codex, GPT-6, with reasoning, repository inspection, tool use, and local test execution. The exact deployment identifier and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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96ab5e3d38 |
fix(recovery): read a retained Runner from its own allocation and continue unverifiable no-replay holds from the last save (#20567)
<!-- Write all pull request text in Simplified Technical English (ASD-STE100): short sentences, one instruction per sentence, simple approved vocabulary, and the active voice. --> ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Native warm runs on a remote sandbox continue a saved session in the next run. The next run first reads the retained Runner lifecycle from the sandbox. > - #20346 abandons the workspace epoch of a run that died during preparation. The next run then restores the last save into a new directory of the same sandbox. > - The retained-sandbox binding check required the old and the new directory to be the same. The warm follow-up failed with `native_controller_recovery_missing_evidence:retained_sandbox_binding` before provider work. > - The failed run's no-replay hold then refused its files with `allocation_ownership_ambiguous`. The task stayed blocked. The text said that Retry "succeeds only after Paperclip is updated", so no click could help. > - This pull request binds the Runner read to the directory that the retained lease recorded, and lets the existing retained-source fallback settle these holds from the last save. > - The benefit is that a moved workspace continues its session, and a hold that cannot be verified continues automatically instead of dead-ending. ## Linked Issues or Issue Description Refs #20346 **What happened?** On staging, a warm native continuation ran about 10 minutes after a deploy. The run before it died during preparation (database deadlock), so its workspace epoch was abandoned. The continuation restored the last save into a new allocation directory of the same Daytona sandbox. It then failed with `native_controller_recovery_missing_evidence:retained_sandbox_binding`, because the retained lease of the committed source run recorded the old directory. The failure recorded a no-replay hold (`native_continuation_requires_reconciliation`, resolved with outcome `blocked`). Workspace recovery refused the source with `allocation_ownership_ambiguous`, because the sandbox's reusable-lease chain had predecessors in another directory and a non-native preparation-only run. The task stayed blocked with "Retry runs the check again and succeeds only after Paperclip is updated." **Expected behavior** The continuation reads the retained Runner state from the directory where that Runner wrote it, and continues. When retained files cannot be verified, the task continues from the last committed save without a person. **Steps to reproduce** 1. Run a warm native session on a reusable remote sandbox and let it commit. 2. Fail the next run during preparation, so that its epoch is abandoned (#20346). 3. Start the next warm continuation. It restores the last save into a new allocation directory and fails with `retained_sandbox_binding`. 4. See the hold refuse its source with `allocation_ownership_ambiguous` and stay blocked. **Paperclip version or commit** Staging `c874cfa4dacc` (includes #20346). ## What Changed - `assertNativeRetainedSandboxBinding` now returns the directory that the retained lease recorded. It accepts a different target directory only when both are canonical sibling allocations of the same execution workspace under the sandbox's `.paperclip-workspaces` (`<workspaceId>` or `<workspaceId>-<epoch>-<leaseId>`). Same sandbox (`providerLeaseId`), environment, run, issue and committed owner are still required. Other directories stay refused. - `restoreRemoteSuspendedRunnerCheckpoint` reads the Runner state from that recorded directory. A moved source must be suspended and settled. A Runner left in the old allocation is never adopted live. - The retained-source fallback (`continueFromLastSavedWorkspace`) and its discovery now also cover the native no-replay hold (`native_continuation_requires_reconciliation`, active or resolved with outcome `blocked`, replay blocked for the same run). Rows saved by earlier releases are discovered without migration. - The fallback owns the Blocked status of such a hold only while the recorded `nativeFailureBlock` status version still matches the task. Otherwise it keeps the newer block and starts no continuation. - The refusal text no longer says "succeeds only after Paperclip is updated", and it promises no fallback. - `doc/execution-semantics.md` describes both rules. ## Verification - Red (unfixed code): `native-controller-recovery.integration.test.ts` "binds a retained Runner read to the source's directory after the workspace moved within the same sandbox" failed with `native_controller_recovery_missing_evidence:retained_sandbox_binding` at `native-controller-recovery.ts:145`, the staging error. - Red (unfixed code): `workspace-recovery-fallback.test.ts` "continues a resolved-but-blocked native no-replay hold from the last save, discovered by the worker" failed: the worker found no due work for the exact staging row. The newer-block safety case and the message case in `system-recovery-state.test.ts` also failed. - Provider boundary: a new test drives `restoreRemoteSuspendedRunnerCheckpoint` through a sandbox runner that refuses paths outside the sandbox workspace base. The suspended case reads `runner-state.json` from the source directory, never the moved root. The ready case is refused with `runner_not_settled` and caches nothing. - Green: `native-controller-recovery.integration.test.ts`, `workspace-recovery-fallback.test.ts` and `system-recovery-state.test.ts` pass (45 tests). The neighbouring suites `workspace-recovery-retry-copyback`, `workspace-recovery-preparation-gates` and `workspace-recovery-stop-proof` pass (135 tests). - Safety cases: another workspace, another parent, a non-canonical path or name (`-0-`, trailing text), `/unrelated` and another sandbox stay refused. A hold whose task moved to a newer Blocked decision keeps the block and starts no continuation. Exactly one continuation is delivered. Native replacement is denied for the abandoned source, so no second executor starts. - `npx tsc --noEmit -p server/tsconfig.json` passes. `pnpm verify` returns exit 2 (a global doc input changed), so required CI supplies the broad coverage. ## Risks - Previous-release state: rows saved by earlier releases carry forward without migration. The binding reads existing lease metadata. The fallback discovers existing resolved-but-blocked holds by their existing evidence fields. - The binding now accepts a sibling allocation directory. The read still binds to the exact sandbox, run, environment and committed owner, and it reads only the source's recorded directory. A non-suspended Runner in a moved allocation is refused, not adopted. - The fallback abandons the unverified epoch and continues from the last committed save with a fresh session. In the staging shape the run did no provider work after it restored that save, so no work is lost. Unverified files are attached to the task when they can be read, as before. - Not verified live: a real warm Codex resume after a moved allocation on Daytona. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with tool use (shell, file edits, read-only browser access to staging). Extended reasoning enabled. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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e5abcbf7a9 |
fix(native): release a restart claim that lapsed during a failed preparation (#20529)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work
> - After a restart, native restart recovery claims an unfinished run
and prepares it again on the same heartbeat run.
> - The restart claim holds a lease on the run's native coordinator row.
For a remote claim with durable authority, the lease is 60 s.
> - When that preparation fails, the failure path first preserves the
remote workspace. Then it settles the run.
> - When preparation outlived the claim lease, preservation took the
run's own lapsed claim for another owner. It threw
`NativeWorkspaceFinalizationBusyError`, and the execution returned
without settling. The run stayed `running` with no event until a later
scan reclaimed it (4.5 min in one wave, never in another).
> - This pull request releases exactly that lapsed claim and asks
restart recovery to decide on the run right away. It also logs the cause
when the failure path defers.
> - The benefit is that a failed restart-claim preparation is reclaimed
or blocked visibly within seconds, instead of hanging.
## Linked Issues or Issue Description
Refs #20514 (the same restart-chaos investigation).
**What happened?**
In restart-chaos wave `w-20261110T101517-s11936` (Daytona R1, K2, ST1),
run `9d39550a` got a `bootstrap_incomplete` restart claim (generation
3). Its `heartbeat.prepare.run_output` step waited 141 s through an ST1
storage outage. The 60 s claim lease lapsed meanwhile, and the begin
failed with `run_log_writer_authority_lost` when storage came back. The
inner failure path then called `preserveNativeFailedWorkspace`. Its
`ownsClaim` check required an unexpired lease, so the run's own claim
counted as another owner and the call threw
`NativeWorkspaceFinalizationBusyError`.
`preserveNativeWorkspaceOnFailure` set `nativeOwnershipHeld` and the
execution returned before `runCompletion.failRun`. No failure was
recorded, and nothing was logged. The run stayed `running` until a later
scan reclaimed it 4.5 minutes later. In a second wave no such scan came,
and the run stayed `running` for 30 minutes.
**Expected behavior**
A failed preparation must settle or retry, or be claimed promptly by its
next owner. It must not stay `running` with no record.
**Steps to reproduce**
1. Claim a remote native run for restart recovery.
2. Keep its preparation busy past the 60 s claim lease, for example with
a storage outage during `runOutput.begin`.
3. Let preparation fail. The run stays `running` with no failure event.
**Paperclip version or commit**
`master` at
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c58356003f |
fix(native): give run finalization its own retry budget (#20555)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work
> - Native runs save an accepted result. Then a finalizer applies that
result to the issue.
> - After a control-plane restart, recovery can resume the same run.
Each resume uses one provider attempt (`coordinator.attempt`).
> - The finalizer used the same `coordinator.attempt` value as its own
retry budget. After three resumes, `attempt` was 3. So the first
transient finalization failure made the coordinator `terminal_failure`.
> - The result was then lost: the issue stayed `in_review` and no Retry
was available. This breaks the rule that a restart must not leave a task
stuck.
> - This pull request gives finalization its own retry count. Provider
attempts no longer use up finalization retries.
> - The benefit: a resumed run that finishes its turn also finishes its
task, and finalization stays bounded.
## Linked Issues or Issue Description
**What happened?**
In restart-chaos wave `w-20261110T044338-s20385`, task t03 (local,
Codex, three K1 SIGKILL restarts, `--db-pressure 4`), recovery resumed
run `d5d0e839` three times (`providerAttempt: 3`). The resumed turn
completed and the server logged `run.result.accepted`, and the run ended
`succeeded`. The first finalization hit `NativeStatusRaceError` three
times under row contention. `recordRetryableFailure` then compared
`coordinator.attempt` (3) with its limit of 3 and wrote
`terminal_failure` / `native_finalization_retry_exhausted`. The run's
`execution.nextAction` is "Reassess against the latest authoritative
issue status version.", which only the `status_cas_exhausted` branch
writes. The second finalize call 2 s later got
`native_finalization_terminal_failure` from `claimCoordinator`. The
issue stayed `in_review` with `canRetry=false`.
**Expected behavior**
A transient finalization failure must stay retryable. The finalizer must
apply the saved result without another provider turn. Finalization must
still have a limit.
**Steps to reproduce**
1. Resume a native run until its coordinator `attempt` is 3, for example
with three restarts.
2. Let the resumed run save an accepted result.
3. Make the first finalization fail with a retryable error.
4. Before this fix, the coordinator goes directly to `terminal_failure`.
The new test
`server/src/__tests__/native-finalization-retry-budget.test.ts`
reproduces this order.
**Paperclip version or commit**
The wave ran at e2b0290213. The bug is still on master at
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bd30ef8510 |
perf(chat): authorize the waits of an issue page with one read (#20551)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Agents can work on tasks that start from an external chat, such as Slack. When the agent waits for the next chat message, the task shows "in review" with an external response wait. > - Issue lists and inbox attention show these waits. To show a wait, the server checks that the chat conversation is still authorized: the messages, the destination, the endpoint, and each person who wrote. > - The server did this check one time for each waiting task, and it started all the checks at the same time. A page with 19 waits sent 19 copies of the message-link statement at the same moment, each on its own pool connection, and then 19 copies of each policy read. > - On a hosted database, 19 identical copies of this statement were active at the same moment, about 670 ms each. They were 19 of the 20 active queries. > - This pull request reads the messages of all waits of a page with one statement and shares the policy reads between the waits. Each wait gets the same authorization result as before. > - The benefit is fewer statements and fewer connections for each issue page, so one page cannot fill the pool with copies of one read. ## Linked Issues or Issue Description Refs #20400 (shares wait reads between the callers of one request; this change removes the per-wait fan-out inside that shared read). Refs #18966 (reuses the prepared message-link statement; this change keeps that statement for single runs). **What happened** `listExternalReviewWaits` ran `authorizeChatConversationForBoundRun` one time for each waiting task, inside `Promise.all`. Each call sends the message-link statement, then a resource read, and three reads for each person. A page with N waits sent N copies of each statement at the same time, on up to N pool connections. **Expected behavior** One issue page sends one message-link statement for all of its waits. A resource or a person that is common to many waits is read one time. The authorization result of each wait does not change. **Steps to reproduce** 1. Put many tasks of one company in review with an external chat response wait. 2. Open the issue list or the inbox. 3. Look at the active statements of the database. One copy of the message-link statement runs for each wait. ## What Changed - `server/src/services/native-runtime/chat-attachment-reuse.ts`: - Split `authorizeChatConversationForBoundRun` into steps: read the bound provider and wake comments, read the message rows, and apply the policy to the rows (`authorizeBoundRunLinks`). The single-run path uses the same prepared statement, the same lock modes and the same policy code as before. - Move the message-link join and its policy filters to one query builder, `boundRunLinksQuery`. The single-run statement and the batch statement both use it. - Add `authorizeChatConversationsForBoundRuns(db, companyId, runs)`. It is read-only and takes no locks. It reads the messages of all runs with one statement, then gives each run only the rows that the single-run statement returns for that run (same issue, agent, provider and comments). The runs share each distinct resource and principal read. Each run gets its conversation, or `null` for a policy denial. Other errors are thrown, as before. - Add `isBoundChatAuthorizationDenial` for the three policy denial errors. - `server/src/services/native-runtime/external-review-wait.ts`: `listExternalReviewWaits` uses the batch authorization. The inherited GitHub review-wait reads do not change. - `server/src/__tests__/batched-chat-authorization.integration.test.ts`: new tests on real PostgreSQL. For each case, the batch result must equal the result of separate single-run reads. The cases include each denial: a missing or foreign comment, no comments, no execution marker, a wrong provider, agent or issue, a person without a link or without a membership, a viewer member, a revoked link, a disabled or unavailable destination, a paused endpoint, a closed conversation, an unprocessed delivery, a delivery without a person, and a verifying endpoint. A test also makes sure that one person's decision never applies to another person in the same batch, and that a batch sends one message-link statement. - `scripts/benchmark-chat-bound-authorization.ts`: a local benchmark that loads the pre-fix modules from a baseline commit, checks that both versions return the same waits, and measures them. ## Verification - `pnpm --filter @paperclipai/server exec vitest run src/__tests__/batched-chat-authorization.integration.test.ts src/__tests__/prepared-chat-authorization.integration.test.ts` passes (10 tests). - Mutation check: when I removed the issue filter from the per-run row selection, or shared one principal decision for all people of an endpoint, the new tests failed (1 and 3 failures). - Related suites pass: `heartbeat-reviewed-chat-binding`, `external-chat-wait`, `preserved-native-response-wait`, `chat-attachment-reuse` and `external-review-wait` (392 tests). - `pnpm verify` asks for broader verification because the change adds a file under `scripts/`. Required CI supplies that coverage. - Benchmark: `pnpm --filter @paperclipai/server exec tsx ../scripts/benchmark-chat-bound-authorization.ts --baseline-ref=f4337bb5fb` (the measured pre-fix commit) Benchmark fixture (synthetic, local PostgreSQL 18.1, pool of 10): one company, one Slack endpoint, 20 tasks waiting for a chat response from 5 people, 4 of those waits denied (the person is a suspended member), and 2,000 earlier conversations with 50,000 processed deliveries (6 KiB events, 419 MB). Both versions return the same 16 waits. 15 alternating pairs after warm-up: | One issue page (20 waits) | Before | After | | --- | --- | --- | | Statements sent | 101 | 18 | | Message-link statements | 20 | 1 | | Server time of the message-link statements | 0.50 ms (sum of 20) | 0.13 ms | | Page time, median (min to max) | 8.86 ms (6.94 to 12.05) | 4.05 ms (3.62 to 5.54) | | 8 pages at the same time, median (min to max) | 54.18 ms (48.36 to 89.24) | 14.99 ms (12.60 to 19.59) | ## Risks - The batch must give each wait the same result as a separate read. The batch statement uses the same join and policy filters. It then selects each run's rows with the equality filters of the single-run statement. The policy code is the same function for both paths. The tests compare both paths for each denial case. - Shared reads: the batch reads each resource and each person one time. All reads are plain reads with no locks, as before. A policy change that occurs during one page read can now apply to all waits of the page at the same time, instead of to some of them. - An invalid wake comment id in one wait makes the whole page read fail. This was already true: the failure of one wait rejected the whole `Promise.all`. - The single-run path (attachment reuse, status decisions, run preparation and others) keeps its prepared statement and lock modes. The order of the conditions in its WHERE clause changed; the conditions are the same. - Not proven: why each copy took about 670 ms on the hosted database. Locally one copy takes about 0.03 ms with the expected index plan. The likely causes are the burst of copies on a small compute and cold pages. Verify after deployment that the statement runs at most one time for each issue page request. - No migration and no schema change. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, with tool use and code execution in Claude Code. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |