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DottaandPaperclip 61e8d5c7eb fix(ci): keep trusted full-ci label runs on AWS (#18855)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Public pull requests need CI without access to private runner
capacity.
> - Trusted CI CODEOWNERS use the AWS runner fleet after identity and
revision checks.
> - The PR caller accepts both `profile-ci` and `full-ci` label events.
> - The runner gate accepted only `profile-ci`, so `full-ci` sent
trusted work to GitHub.
> - This change accepts both labels and keeps the existing authorization
checks.

## Linked Issues or Issue Description

Refs #18821. Observed on #18848 in [run
41711436968](https://github.com/paperclipai/paperclip/actions/runs/41711436968).

**What happened?**

A CODEOWNER added `full-ci` to a trusted PR. The metadata gate ran on
AWS, then sent the test matrix to GitHub with the notice `only the
profile-ci label can request a profiling run`.

**Expected behavior**

Both supported labels keep authorized CI on AWS. A label must not grant
an outside contributor access to AWS.

**Steps to reproduce**

Add `full-ci` to an open PR whose author and event sender satisfy the CI
owner and numeric allowlist checks. Before this change, the runner
decision returns `ubuntu-latest` before it checks those identities.

## What Changed

- Accept `full-ci` and `profile-ci` label events in the trusted runner
gate.
- Test both labels with trusted users, unlisted users, and
numeric-allowlisted users who are not CI owners.
- Document that label selection changes CI scope and preserves runner
authorization.

## Verification

- The new trusted `full-ci` regression failed before the fix with
`ubuntu-latest` and passes after the fix.
- `node --test .github/scripts/tests/ci-routing.test.mjs
.github/scripts/tests/ci-plan.test.mjs
.github/scripts/tests/ci-profile.test.mjs
scripts/__tests__/e2e-shard.test.mjs`: 147 passed.
- `actionlint -shellcheck='' .github/workflows/ci-routing.yml`: passed.
- `git diff --check`: passed.
- This isolated checkout has no installed workspace dependencies.
Repository-wide typecheck, tests, and build are delegated to this PR's
CI; local verification covers the changed routing and its callers.
- A read-only replay against this PR's real GitHub identities and
commits returned GitHub with the old `full-ci` guard and AWS with the
corrected guard. No PR code was executed by the replay.
- Greptile reviewed current head
`47f7159f67c8633830d7732cb68c6d43d8243fe5`: 5/5, successful check, no
unresolved review threads. Both incremental-CI qualification jobs and
commitperclip review passed.
- Full CI is not green. Attempt 1 lost workers to verified Spot
reclamations in `m5.xlarge/us-east-1c`. After excluding that type from
new placements, one failed-job retry retained 19 successful checks and
reran 27 interrupted checks on AWS. The policy check passed, including
these regressions. AWS then confirmed seven more reclaimed
`m8a.xlarge/us-east-1c` workers and two reclaimed
`m8i-flex.xlarge/us-east-1b` workers. The affected checks show runner
shutdowns; unaffected jobs remain running. [Recovery
attempt](https://github.com/paperclipai/paperclip/actions/runs/41714303495/attempts/2).

## Risks

This changes the event allowlist before authorization. The author, event
sender, rerun actor, repository, CODEOWNERS, numeric allowlist, and
immutable revision checks still apply. Unrelated labels remain denied.
Separate helper workflows that explicitly choose GitHub runners are
outside this change.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, shell, Git, and GitHub API
tools. The runtime does not expose a more specific model build ID or
context window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-03 15:09:36 -06:00
DottaandPaperclip 2a16dcf629 fix(workspaces): preserve shared directory trees during enrollment (#18835)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - A volume-free web server needs existing task files in durable object
storage.
> - Historical workspace records can share a physical folder or contain
other task folders.
> - A task-level migration hold cannot fence every alias, and capturing
a parent recursively duplicates nested task data.
> - Offline enrollment imports children first and verifies their durable
coverage before omitting them from a parent archive.
> - Snapshot retention preserves those child versions for as long as a
covering parent depends on them.
> - Existing files, task bindings, and archived states remain intact
through the storage migration.

## Linked Issues or Issue Description

Builds on merged #18826.

**What happened?**

The per-workspace importer could capture a shared project folder while
another workspace record still owned the same path. It also recursively
included runtime-created nested task workspaces in each parent import.
Packaged enrollment rejected existing workspace data instead of invoking
its migration owner.

**Expected behavior**

Require offline maintenance for overlapping paths. Import nested tasks
before their parents, verify every excluded directory against its saved
snapshot, preserve dependencies through retention, and resume
interrupted imports without replacing existing remote authority.

**Steps to reproduce**

Create a project workspace and another task workspace below its
`.paperclip/worktrees/` directory. Try importing either while ordinary
writers are running, then run offline enrollment. Interrupt a parent
import after upload and resume it.

## What Changed

- Add physical-overlap admission checks and an offline entry-point
guard, including global running and queued executions.
- Import pending records in leaf-first pages through the existing
migration owner.
- Verify nested snapshots by downloading, restoring, and comparing the
original source before and after parent upload; check transitive
dependencies.
- Publish parent dependency receipts under child snapshot row locks.
Retention pins those children and revisits them when the parent is
deleted.
- Index imported-child dependency lookups with a partial GIN index; a
PostgreSQL query-plan regression covers 2,500 unrelated snapshots.
- Propagate cancellation through capture and object storage operations
and preserve existing retry journals.
- Wire workspace migration into packaged maintenance and document its
preservation contract.

## Verification

- The original overlap and duplicate-parent regressions failed before
implementation.
- 73 migration and retention tests pass against real PostgreSQL and
files, including interrupted uploads, resumed batches, equal-path
aliases, changed or missing child data, nested descendants, and active
or queued executions.
- Six S3-compatible storage integration tests pass, including migration
through the maintenance owner and restoration of both parent and child
after deleting the original filesystem.
- The standalone process case was initially skipped because the worktree
had no bundle. After rebuilding the server and runtime bundle, that test
passed against PostgreSQL and S3: authenticated ready/export receipts,
preserved decision secret, blocked application routes, and clean SIGTERM
shutdown.
- Server typecheck, server build, runtime bundle build, and
module-boundary checks passed. Full repository CI passed on
97136a20b9 after targeted retries of
infrastructure-interrupted jobs.
- Review fixes resolve physical paths through symlinked ancestors and
persist each parent journal’s original capture scope, including
pre-change journals. All three new regressions failed before their
fixes. An initial abort/retry test exposed JSON object-key ordering in
the saved scope; deep equality fixes that case, and the full migration
suite passed.
- Three new fixtures initially omitted required workspace fields; one
also omitted its task binding. The fixtures now satisfy the existing
contract; production validation was not relaxed.
- The parent PR's full local suite stopped on a chat retry-notice
timeout and a following fake-timer failure. All four relevant cases
passed separately without source changes; this is not a claim that the
full local suite passed.
- No staging enrollment or live rolling-deploy result is claimed by this
PR.

## Risks

The offline flag is an internal maintenance contract: Cloud must
actually stop every predecessor deployment before starting the process.
Deep or large trees require additional object downloads and source
comparisons and may exceed one maintenance window; import journals
support retry. Dependency lookups are company-scoped and event-driven,
with no added idle polling. Unavailable archived sources and unresolved
recovery/copyback still block migration and require separate owner work.
Unsupported local providers and cleanup_failed workspaces deliberately
remain enrollment blockers: filtering them from both the batch and
eligibility would abandon local files when the volume is detached. Two
regression tests prove that rejected records keep their files and do not
acquire remote authority. Original folders and the original volume
remain retained. The additional review request to ignore parallel-write
policy, stale task ownership, or a missing task binding in offline mode
is intentionally not applied: stopping deployments does not establish
those semantics. #18841 documents the separate owner actions and adds
three offline regressions preserving their files and blocking detach.
The batch reports the first failed workspace and supports journaled
retry; it does not promise aggregate diagnostics.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, repository tools, and code
execution. This session does not expose a more specific serving model ID
or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used with available version and
capability details
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have described the issue in-PR using the bug template
- [x] I have not referenced internal or instance-local issues or links
- [x] My branch name describes the change and contains no internal task
ID
- [x] I have run the focused tests locally and they pass
- [x] I have added tests for the changed behavior
- [x] I have updated relevant documentation
- [x] I have considered and documented risks
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address reviewer findings before merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-03 14:50:14 -06:00
DottaandPaperclip e0276e0166 fix(workspaces): identify remote command timeouts (#18827)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Remote workspaces prepare repositories and save files through
sandbox commands.
> - Each command has a timeout and a known operation.
> - The transport discarded that information when a command timed out.
> - A failed clone then appeared as the same generic error as other
failures.
> - This pull request keeps the operation and timeout in a fixed
diagnostic.
> - Operators can identify the failed stage without exposing command
output.

## Linked Issues or Issue Description

**What happened?**

A remote workspace setup command reached its 300-second transport limit
before provider work started. The workspace layer reported only
`remote_workspace_operation_failed`. That message concealed the timeout
and the affected operation. A later full clone on the same sandbox image
passed in 107 seconds, so the original clone delay remains unexplained.
This PR repairs the loss of diagnostic information. It does not claim to
prevent the underlying delay.

**Expected behavior**

A transport timeout must remain a failure. Its diagnostic must identify
the operation and configured limit. It must exclude raw output and must
not automatically repeat a command whose remote outcome is unknown.

**Steps to reproduce**

1. Return `timedOut: true` from the sandbox command boundary during
workspace preparation or cleanup.
2. Observe that the base implementation reports only
`remote_workspace_operation_failed`.
3. Apply this change. Preparation reports
`remote_workspace_operation_timed_out: prepare (configured timeout
300000ms)`. Cleanup retains its separate 10-second limit.

**Paperclip version or commit**

The regression was reproduced on master base
`367f29478d14003cc5c0f161b7ce8f3164993634`. The fixed current head is
`be45ce6594254bd6b94023a550d8b655dd704bb0`.

**Deployment mode**

Hosted Paperclip with native Runner and Daytona sandbox execution. Local
acceptance also uses disposable PostgreSQL and filesystem commands.

Related work: #18403 introduced remote workspace authority. #18705 added
a fixed full-disk diagnostic. I searched recent clone and
remote-workspace PRs and found no duplicate timeout-reporting repair.
This is a defect fix and does not add a roadmap feature.

## What Changed

- Give each internal workspace command a closed operation name: prepare,
repository, archive helper, capture, restore, or cleanup.
- Preserve that operation and the configured limit in a typed error when
the transport reports a timeout. Do not claim a measured elapsed time.
- Keep other failure diagnostics and exact safe-message checks
unchanged.
- Preserve typed cleanup timeouts in the operation cleanup journal while
retaining generic diagnostics for untrusted errors.
- Add preparation, cleanup, and real-PostgreSQL lifecycle regressions.
Document the timeout and the need to reconcile saved receipts before
recovery.

## Verification

- Red: both transport regressions failed on the base implementation. A
separate real-PostgreSQL cleanup regression reproduced the review
finding: the operation journal replaced a typed timeout with a generic
error.
- Green: all 62 remote transport and archive tests and all 50
real-PostgreSQL workspace lifecycle cases passed. The lifecycle suite
ran with an explicit disposable database; it was not skipped. Command:
`pnpm exec vitest run --project @paperclipai/server
server/src/services/remote-workspace-transport.test.ts
server/src/services/remote-workspace-snapshot-archive.test.ts`.
- Safety: a timeout with exit code zero still fails. Raw stdout and
stderr stay out of the error. A timeout cannot claim the fixed
unfinished-Git diagnostic. No command retry occurs. Existing saved files
remain unchanged. Existing archive, restore, receipt, symlink,
credential-isolation, and full-disk controls pass. The cleanup lifecycle
cases retain the acknowledged snapshot, preserve working files, avoid
duplicate uploads, record only a safe typed timeout, and settle cleanup
on the next normal reconciliation. An untrusted error that mimics the
timeout prefix stays generic.
- Live acceptance: production transport code ran against actual Daytona
SDK 0.203.0 timeouts on the incident image, with 4 CPUs, 8 GiB RAM, and
a 10 GiB disk. A controlled one-second SDK limit produced the generic
baseline error and the fixed exact preparation timeout. The current
`be45ce6594` code was rechecked for both preparation and cleanup. Each
returned the typed error and its own configured limit (300 seconds and
10 seconds) while the controlled SDK fault remained one second. Each
case made one command call. Each disposable sandbox was deleted before
the next case.
- The first live-probe attempt used an incorrect error-name check. It
failed its acceptance check and remains recorded. The probe was
corrected to use the same SDK timeout base class as production. Its
first sandbox was deleted. This was a probe setup failure, not red
evidence for the repair.
- A separate same-image probe ran the real full repository preparation
successfully in 107 seconds. The affected command path is unchanged
except for error reporting. The original task was retried once through
the product on deployed source
`adb49a44346849e751548b2fb640693dbfad4b6f`. The requested memo and its
first document revision persisted after reload and matched the
downloaded attachment. The run succeeded, the task reached Done, its
execution lock cleared, and final workspace save and result commit
succeeded. The diagnostic PR is not deployed.
- Recursive typecheck and build passed on `be45ce6594`. `git diff
--check` passed. The first full-suite attempt stopped before tests
because the offline install had skipped an embedded PostgreSQL native
postinstall. The package's official symlink hydration fixed `initdb`.
- The next Mac run passed 350 chat cases and hit one unchanged 15-second
chat deadline. That case then passed in isolation, and all six full chat
shards passed. The broader Mac matrix was later stopped as partial when
CI results became available. No full single-command Mac pass is claimed.
- Full Vitest file coverage uses the exact successful CI merge tree,
`d264fd98e7fb6eff4a9e6b00d402f88894cc0e57`. Its canonical inventory has
2,899 files. Passing CI covered 2,057 files. The remaining 842 ran
locally through the standard exact-file harness. The inventory and
selection checks show no unassigned files. All four changed source/test
files are byte-identical between the PR head and that merge tree.
- The first remaining-file run passed 771 files. The database group
passed 68 files and reported four deadline/readiness failures in three
unchanged files. Those same three files passed all 12 cases when run
sequentially on Node 24.22.2, matching CI's major version. Assertions,
readiness limits, and test deadlines did not change. The first attempt
used Node 26.4.0 with a parallel UI workload; this does not isolate the
contribution of runtime version versus load. Both attempts remain
recorded.
- [GitHub
CI](https://github.com/paperclipai/paperclip/actions/runs/41699549115)
is green on current head `be45ce6594`: `ci / verify`, typecheck, build,
all selected server/chat/workspace groups, Runner checks, and all eight
browser shards passed. Greptile is 5/5 with no open threads. The prior
P2 was resolved by removing new code comments.
- Structured Paperclip review remains queued because its own previous
accepted result exhausted workspace export recovery. A fresh
current-head request is saved, but normal Retry returns HTTP 409
(`accepted_result_without_new_input`). Its advisory cleanup finding is
fixed in `be45ce6594` and covered by red/green lifecycle evidence. This
check is informational. The branch requires `ci / verify` and `ci /
e2e`, and both pass. The independent review-service limitation remains
recorded; this PR is not deployed.

## Risks

Timeout error text changes. Consumers that compare the old generic
message may need to accept the new diagnostic. No such production
comparison was found in this repository. API shapes, deadlines, retries,
ownership, credentials, and model selection do not change. A timeout
still does not prove that the remote process stopped or that a save
failed before publication. Existing recovery must reconcile that state.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, code execution, and browser
tools. The host does not expose a more specific model ID or
context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-03 14:13:16 -06:00
DottaandPaperclip 2035118526 fix(workspaces): preserve archived data during remote migration (#18826)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Remote workspace storage lets the web server run without a
persistent volume.
> - Existing deployments also contain archived and historical task
workspaces.
> - Retention can remove their folders while preserving encrypted
restore points or Git reconstruction records.
> - The importer rejected those records and only accepted the task's
current workspace.
> - This pull request imports verified saved data without reopening or
rebinding tasks.
> - The benefit is preservation of existing work during an explicit
storage migration.

## Linked Issues or Issue Description

Refs #18403 and #17472.

**What happened?**

An explicit remote-workspace import rejected archived records,
historical task bindings, and removed folders with valid retained data.

**Expected behavior**

Import the recorded files or exact Git commit. Preserve archived state
and the task's current binding. Refuse missing, expired, corrupt, or
changed sources.

**Steps to reproduce**

Archive a task directory with a restore point, remove its folder, and
run the remote-workspace import. Repeat with a Git restore point
containing an unpushed commit and staged and unstaged edits. The
previous importer reports an inactive workspace or missing source.

## What Changed

- Preserve lifecycle state and current task binding while importing
archived and historical records. Recheck the binding before publication
and on resume.
- Expose the task-directory owner's validated restore-point reader.
Reuse it for ordinary restoration and migration.
- Restore archived directories and Git data into private scratch space.
Support saved Git recipes and exact legacy branch-deletion receipts.
- Recover pruned unpushed Git commits from the encrypted bundle and its
explicit prerequisites.
- Keep independent snapshot download, restoration, source checks, writer
guards, encryption, and atomic publication.
- Document the supported import sources and the remaining
tenant-enrollment gaps.

## Verification

- Before production edits, two new regressions failed on archived status
and historical task binding.
- Final focused verification: 58 tests pass across remote-workspace
migration and isolated task-directory restoration.
- Real PostgreSQL, Git repositories, encrypted storage, and restored
file bytes cover cold restoration after removing the old folder and
source object, pruned unpushed history, index and worktree edits,
corrupt/missing/expired sources, binding changes, and source-folder
races.
- A Git fixture initially lacked runtime ownership metadata. Correcting
the fixture made the valid retained-source case pass; no production
validation was weakened.
- Full repository typecheck and build passed. Full `pnpm test:run`
stopped in chat integration shard 2 after two failures: a retry-notice
timeout and a subsequent fake-timer error. All four cases in that
retry-notice group passed in a separate focused rerun without source
changes; the complete suite has not passed locally. All exact-head CI
jobs passed. The separate Paperclip Review app check is still queued;
all existing review threads are resolved. Server typecheck passed after
the review fixes.
- Both review findings were reproduced: the real cleanup owner's
verified-tip receipt was rejected, and a lost upload reply for a legacy
Git source failed with `operation_content_changed`. The fixes accept the
owner's scoped receipt metadata and rebuild reconstructed Git indexes
from their staged trees. Both regressions now pass, including retained
staged and unstaged edits.
- Additional coverage restores from a fresh HTTP clone after deleting
the original repository, imports a nested local checkout with encrypted
settings, and rejects an unapproved nested source without publishing
remote authority.
- This PR does not claim a completed tenant enrollment or a new
zero-downtime deployment proof.

## Risks

Imports can fail when old receipts or repository objects are
unavailable. They retain their migration journal and leave the original
state intact. Operators must resolve pending writers and recovery before
importing. Shared physical roots, nested worktrees, and unresolved
sandbox recovery require separate migration work. This change does not
remove those blockers or alter automatic retention.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, repository tools, and code
execution. This session does not expose a more specific serving model ID
or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either linked existing issues or described the issue in-PR
following the relevant issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links
- [x] My branch name describes the change and contains no internal task
ID or instance-derived details
- [x] I have run the focused tests locally and they pass; full
typecheck/build passed and the full-suite failure is documented
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-03 13:36:22 -06:00
Nicky LeachandClaude Opus 5.5 8ab89f41e4 fix(build): typecheck test projects in 4 GiB (#18738)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Contributors and agents typecheck this repository, often on machines
with limited memory
> - paperclipai/paperclip#18737 made `pnpm -r typecheck` fit in 4 GiB
because the server now checks in layers
> - The test projects outside `pnpm -r` still import server source
through relative paths, so each one checks most of the server as one
program
> - These projects peaked between 6.9 GiB and 14.9 GiB, so they fail on
a 4 GiB machine
> - This pull request makes these projects read the server layers as
declarations, and adds a CI step that keeps them that way
> - The benefit is that every TypeScript project in the repository can
now be checked in 4 GiB, and a later change cannot silently undo this

## Linked Issues or Issue Description

Refs paperclipai/paperclip#18737, which is merged. This pull request
builds on the server layers that it added. No issue exists for this gap.

**What happened?**

`tsc -p tests/runner-e2e/tsconfig.json` peaked at 14.9 GiB at default
settings. `tests/speko-native` peaked at 12.2 GiB,
`server/src/__tests__/helpers/maintenance` at 9.6 GiB, and
`tests/lifecycle-baseline` at 6.9 GiB. On one thread, `tests/runner-e2e`
still peaked at 7.7 GiB.

**Expected behavior**

Each project passes with 4 GiB of memory.

**Steps to reproduce**

Run `tsc -p tests/runner-e2e/tsconfig.json` in a Linux container with
`--memory=4g --memory-swap=4g`. The kernel stops the process.

## What Changed

- Added `tsconfig.layers.json` to the four projects. Each file extends
the project's `tsconfig.json` and references the generated server
declarations.
- Added `scripts/typecheck-test-projects.mjs`. It builds the server
declarations and then checks the named projects, or all four. It takes
`--low-memory`.
- Changed `test:e2e:runner:typecheck` and
`test:lifecycle-baseline:typecheck` to call that script.
`docker-runner-check.yml` calls the first script by name, so that
workflow needs no edit.
- Added `--declarations-only` to `server/scripts/typecheck-layers.mjs`.
The script now also generates `tsconfig.declarations.json`, so
hand-written configs do not name individual layers.
- Exported `runPnpm` from `scripts/typecheck-low-memory.mjs`, so the new
script can use it.
- Added a step to the `Typecheck + Release Registry` job. It runs
straight after the server typecheck and reuses its declarations through
`--reuse-declarations`.
- The script now fails if a project loads server source, even when the
types pass. Test support files, declaration files and JSON files do not
count. This check does not enforce a memory limit.
- Added a unit test that fails if a new project under `tests/` is
neither in `PROJECTS` nor named as a single program.
`tests/runner-acceptance` is the one named project.
- Added `server/src/types/express.d.ts` to
`tests/lifecycle-baseline/tsconfig.json`. That plain config failed alone
with 11 TS2339 errors, and it now passes.
- Exported `isTestFile` from `server/scripts/typecheck-layers.mjs`, so
the source check uses the same rule as the layers.
- Turned off `declaration` in the layered configs. These projects emit
nothing, and declaration checks gave a false TS2883 error when
`tests/runner-e2e` read the server as declarations.
- Added tests, one of which runs the real compiler. Updated
`doc/DEVELOPING.md` and `tests/lifecycle-baseline/README.md`.

The references are not in each project's `tsconfig.json` because Vitest
reads that file. A test showed that Vitest fails when a referenced
config does not exist yet. The `tsconfig.json` files do not change, so
editors and Vitest see the same configs as before.

No new `package.json` scripts were added, as `.greptile/rules.md`
requires.

## Verification

I tested commit `9763880fab`, which is based on `1c9ca5829f`. I copied
the commit into a named Docker volume and ran a fresh install. Each row
ran in its own Linux arm64 container with `--memory=4g --memory-swap=4g`
and 8 CPUs. The first row started with no build output. All rows used
`--low-memory`. CI does not set a memory limit. I used the limit only
for this measurement.

| Project | Errors | Peak (cgroup) | Max process RSS | OOM kills | Time
|
| --- | --- | --- | --- | --- | --- |
| `tests/runner-e2e` | 0 | 3.34 GiB | 3.06 GiB | 0 | 57 s |
| `tests/speko-native` | 0 | 3.60 GiB | 3.27 GiB | 0 | 51 s |
| `tests/lifecycle-baseline` | 0 | 3.43 GiB | 3.15 GiB | 0 | 50 s |
| `server/src/__tests__/helpers/maintenance` | 0 | 3.39 GiB | 3.13 GiB |
0 | 52 s |

`PAPERCLIP_TYPECHECK_LOW_MEMORY=1 pnpm test:e2e:runner:typecheck` and
`PAPERCLIP_TYPECHECK_LOW_MEMORY=1 pnpm
test:lifecycle-baseline:typecheck` also passed in the same limit, with
peaks of 3.55 GiB and 3.52 GiB.

I also ran the CI sequence in one container with the same limit: `pnpm
--filter @paperclipai/server typecheck`, then `node
scripts/typecheck-test-projects.mjs --low-memory --reuse-declarations`.
Both passed, with a peak of 3.46 GiB. The new step took 16 s.

The server layer build sets the peak in each row. Against the
declarations, the projects peaked between 0.9 GiB and 2.2 GiB at default
settings on macOS.

Server source files that each project loads, without test support,
declaration or JSON files:

| Project | Plain `tsconfig.json` | `tsconfig.layers.json` |
| --- | --- | --- |
| `tests/runner-e2e` | 1,345 | 0 |
| `tests/speko-native` | 1,647 | 0 |
| `tests/lifecycle-baseline` | 1,343 | 0 |
| `server/src/__tests__/helpers/maintenance` | 1,716 | 0 |

I counted these on `3f0f31b2f9`. The source check in the script
confirmed 0 for all four projects on this commit.

**Limits of this proof:**

- Without `--low-memory`, the 4 GiB run does not pass. The kernel
stopped the layer build for `tests/runner-e2e` on `3f0f31b2f9`, and the
script exited with status 1. I did not repeat this run on the final
commit. The script does not turn on low-memory mode by itself.
- The Linux runs used arm64, not x64.
- The new CI step has not run in CI. `pr-trusted.yml` runs from
`@master`, so the step first runs after this pull request merges. Check
its first run.

**Other checks on this commit:**

- `server/scripts/typecheck-layers.test.mjs`: 38 tests pass. One test
uses the real compiler to show that the source check tells a layered
config from a config with no references.
- With the references removed from
`tests/speko-native/tsconfig.layers.json`, the script exits with status
1 and reports 1,644 server source files.
- With the declarations removed, `--reuse-declarations` exits with
status 1 and reports TS6053.
- A type error in a test project makes the script exit with status 1.
- `tests/lifecycle-baseline/tsconfig.json` passes with 0 errors.
- `tests/lifecycle-baseline` Vitest suite: 533 tests pass.
- Workflow tests that read `pr-trusted.yml` and CI routing: 114 tests
pass.

**Earlier checks:**

- `server/src/__tests__/server-package-build-script.test.ts` passed 10
tests on `3f0f31b2f9`. This test failed in `ci / General tests (server
(9/12))` on an older head. It tested a build script split that the final
#18737 removed.
- A changed signature in `server/src/services/run-liveness.ts` failed
`tests/lifecycle-baseline/authority.test.ts` through the rebuilt
declarations, before the rebases. When I restored the signature, the
check passed.

**Not run locally:**

- `pnpm test:run` and `pnpm build`. CI covers these.

**Failures that this pull request does not cause:**

`pnpm test:e2e:runner:unit` has 13 failures on this commit, in
`cursor-cloud-replay-fault`, `first-task`, `operating-receipts`,
`pi-controls-evidence` and `workflow-security`. The same 13 tests fail
on `master` at `6ef37398c8`. A comparison of the test names shows no
differences. PR CI does not run this suite.

## Risks

- Low risk to runtime behavior. No shipped code changes.
- **Slower check:** `pnpm test:e2e:runner:typecheck` now builds the
server layers on each run. Before the rebase, it took 30 s on macOS at
default settings, about the same as the old single program for that
project. On this commit it took 57 s in low-memory mode in the 4 GiB
container. The new CI step reuses the declarations, so it took 16 s.
- **Narrower check:** Server source is now checked only by the server's
own layers, not again under each project's compiler options. The
projects also skip declaration-portability checks. These projects emit
nothing, so those checks had no output to protect.
- **Unchanged path:** `tests/runner-e2e/native-completion-checks.mjs`
still runs `tsc -p tests/runner-e2e/tsconfig.json` as one program. It
needs about 15 GiB at default settings. I did not change it because that
file and its inputs are part of a fingerprinted source contract, and no
workflow calls it.
- **Layer growth:** The new checks do not measure memory. If the layers
or the import cycle grow, the checks still pass and the peak rises. This
is intentional. Crossing 4 GiB does not fail a build.
- **Project list:** The CI step checks only the projects in `PROJECTS`.
The unit test covers new projects under `tests/`, but not a new project
in another directory.
- **Reused declarations:** `--reuse-declarations` trusts the
declarations on disk. CI uses it straight after the server typecheck on
the same commit. If that typecheck fails, the job stops first. Stale
declarations can pass locally, so `doc/DEVELOPING.md` warns against
this.
- **Job dependency:** A type error in a test project now fails
`Typecheck + Release Registry`, and so `ci / verify`.
- **Not covered:** The new step runs no tests. `node
scripts/typecheck-low-memory.mjs` and the Docker image build also have
no new guard.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- Provider: Anthropic. Model: Claude Opus 5.5 (`claude-opus-5-5`),
through Claude Code with tool use and code execution.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-03 11:09:12 -08:00
DottaandPaperclip 4a38ff9c92 fix(ci): make Cloud readiness reruns and fixtures reliable (#18823)
## Thinking Path

> - Paperclip manages agent work and preserves task state.
> - Cloud readiness verifies an exact source revision before release.
> - Its workspace tests must wait for execution and database cleanup to finish.
> - Two attempts hit the same ten-second polling limit and read a running row.
> - The second attempt also lost AWS runners and exceeded a fixture cleanup limit.
> - This pull request waits for owned execution, bounds client shutdown, and gives verification reruns an independent runner pool.
> - Assertions, source identity and required verification gates stay in place.

## Linked Issues or Issue Description

**What happened?**

[Cloud readiness run 41684102136](https://github.com/paperclipai/paperclip/actions/runs/41684102136) failed twice on master `367f29478d14003cc5c0f161b7ce8f3164993634`.

Attempt 1 failed `heartbeat-workspace-busy.test.ts:473`: expected `succeeded`, received `running`. Attempt 2 failed the same helper in the inherited-workspace resume case at line 744. The helper polls for ten seconds, then returns the active row as if the wait finished.

Attempt 2 also exceeded the 30-second `workspace-preparation.test.ts` teardown limit. Its client close had no deadline, and database plus directory cleanup shared the default hook budget despite the fixture's existing 90-second startup budget.

Other attempt-2 failures show runner shutdown or lost communication. Several shutdown signals arrived at 18:05:17 UTC. Read-only AWS inspection confirms that all eight infrastructure-failed instances carry `runs-on-workflow-job-interrupted=true`. Five have explicit `Server.SpotInstanceTermination` reasons, including the server-1 runner that lost communication. Three were terminated through the fleet's shutdown path. CloudTrail records the Rust runner's interruption tag at 18:03:37 UTC and its termination by the RunsOn fleet role at 18:05:31 UTC, despite EC2 showing a user-initiated termination. Repeating the entire workflow reused the same Spot fleet.

**Expected behavior**

Wait for owned heartbeat execution before reading final state or scheduled retries. Bound database-client shutdown and allow the fixture's cleanup cost class to finish. Rerun verification on GitHub-hosted runners after an interrupted fleet attempt. Preserve all checks and report prior failures.

**Steps to reproduce**

1. Delay the test adapter beyond the helper's ten-second polling window.
2. Invoke the ordinary local shared-workspace run or resume the deferred sandbox run.
3. Observe the old helper return `running` before the execution completes.
4. Evaluate the old runner expressions with `github.run_attempt = 2`; they still choose the interrupted AWS pool.

**Paperclip version or commit**

Base: `367f29478d14003cc5c0f161b7ce8f3164993634`.

**Deployment mode**

GitHub Actions Cloud readiness, with disposable PostgreSQL fixtures.

Related: #11293 fixed the earlier gap between cancellation and retry-row insertion. This change waits for the complete execution instead. Duplicate searches covered the workspace test, retention fixture and runner shutdown reports.

## What Changed

- Replace both workspace-test polling helpers with the existing heartbeat completion barrier. Keep final status, retry and coordination assertions.
- Bound workspace-preparation client shutdown to one second. Apply the existing embedded-PostgreSQL fixture budget to its teardown.
- Use AWS only for the first exact-source attempt. Route later verification, chaos and cloud-migrator planning/build attempts to GitHub-hosted runners. The publisher keeps its existing routing. The final branch also incorporates upstream #18821's CODEOWNER routing fix.
- Add runner-expression coverage for numeric, string, missing and later attempt values. Document retry routing.

## Verification

- The original workflow's failed assertions and interrupted jobs remain linked above. A local two-suite run also passed all 157 assertions and failed only the original 30-second teardown hook.
- All 341 workflow contracts pass. After the master synchronization, all 347 routing and CI-planner controls pass. Actionlint passes for the three changed workflows.
- A matched delayed-adapter comparison uses disposable PostgreSQL 17 databases, the same 11-second adapter delay, and the same 90-second experimental outer budget. The old helper fails with `running`; the completion barrier passes. Production test deadlines stay unchanged.
- Earlier experiments hit a 30-second experimental outer limit and the macOS host's shared-memory limit during native database startup. The completed comparison uses task-owned databases on an existing test server. Those earlier attempts are not counted as passes.
- All 31 workspace-busy cases pass with normal test deadlines. The 126-case workspace fixture also passes with its 90-second teardown budget.
- Final-head cleanup measurements: main client close 7 ms, owned database cleanup 20,938 ms, and workspace-home removal 826 ms. A measured fixture held 124,494 PostgreSQL files (208 MiB) after repeated table resets. The measured database cleanup alone consumes most of the old 30-second hook budget. The separate baseline reproduced a timeout at that hook; the fixture now uses its established 90-second cost class.
- Repository typecheck and build pass on synchronized head `2aceb3abd144a569efddabed3b7e0550ea23ceb2`.
- All 157 focused cases pass on the synchronized branch, including complete PostgreSQL 18 fixture shutdown. [Full hosted CI](https://github.com/paperclipai/paperclip/actions/runs/41697804471) passes on the final head, including the required verification and E2E aggregates, all server/chat/workspace groups, Runner lanes and all eight browser shards. The separate GitHub quality-review workflow also passes. All 60 reported checks are terminal: 54 pass, three are informational neutral results, and three are expected skips. There are no failures or pending checks. The complete local `pnpm test:run` command was not run; targeted fixtures already encountered this host's shared-memory limit. Hosted CI supplies the full Vitest and browser matrix.
- Greptile and Paperclip Review both give synchronized head `2aceb3abd144a569efddabed3b7e0550ea23ceb2` 5/5. There are no open review threads.
- Module-boundary and whitespace checks pass.

## Risks

- Hosted reruns can have different cache hit rates and queue times. They execute the same source and verification commands.
- The first attempt retains the existing AWS Spot fleet policy. AWS evidence establishes several interruption-triggered failures; later verification attempts use an independent pool. This does not change the fleet's external capacity policy.
- The completion barrier waits for owned background execution. A hung execution still fails the test's outer deadline.
- The larger teardown budget remains finite. PostgreSQL's bounded stop protocol and cleanup errors still fail the hook.
- No production execution, database schema or provider contract changes.

## Model Used

OpenAI Codex, based on GPT-6, with reasoning, repository inspection, code edits and test execution. The runtime does not expose the exact serving model ID or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context to this change
- [x] I have specified the model used (with version and capability details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template
- [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before requesting merge


Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-11-03 13:08:28 -06:00
DottaandPaperclip 83b5f7d486 fix(ci): keep CODEOWNER PRs on AWS as master advances (#18821)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Its PR checks use reserved AWS capacity for authorized maintainers.
> - The routing gate waited for GitHub capacity and compared an old test
merge with a newer base branch.
> - Normal merges into master then sent trusted PR jobs to the GitHub
queue.
> - This change restores AWS admission and validates the immutable merge
selected for the run.
> - Current CODEOWNER and rerun identity checks still control PR
execution.

## Linked Issues or Issue Description

Related: #18376 moved the gate to GitHub-hosted capacity. #16042
introduced reserved AWS admission.

**What happened?**

In PR #18811, GitHub created test merge
`608d862ff1650db108a3832a2c67f8795924f0e7` at 17:17 UTC. Master advanced
at 17:25. The gate started at 17:30 and rejected the older merge parent
because it did not contain the newer master tip. The authorized PR then
selected GitHub-hosted runners. The gate itself also needed a
GitHub-hosted slot.

**Expected behavior**

Authorized maintainers use reserved AWS admission and PR workers. Normal
base advancement does not change runner placement. Current owner checks,
PR head checks, run-attempt checks, and base-history validation remain
required.

**Steps to reproduce**

1. Start a PR run whose author and sender are current CI CODEOWNERS.
2. Advance master while its routing job waits.
3. Run the gate against the original event merge and the current base
tip.
4. Before this change, the gate selects `ubuntu-latest`. After this
change, it selects the public PR AWS fleet.

**Paperclip version or commit**

Reproduced on master `367f29478d14003cc5c0f161b7ce8f3164993634`.

**Deployment mode**

GitHub Actions with RunsOn Fleet on AWS.

## What Changed

- Restore the reserved routing fleet for the synchronized maintainer
admission roster.
- Check the immutable event merge and its PR head. Accept base snapshots
between the event base and the current base tip.
- Allow GitHub to regenerate its live merge ref while the original run
waits.
- Retain stacked-base validation and all current CODEOWNER, repository,
author, sender, and rerun-attempt checks.
- Add advancement, regenerated-merge, unrelated-history, and
admission-placement regressions, including a stacked parent that
descends from the event base but diverges from the live base.
- Align the developing and CI profiling guides with reserved AWS
admission and current CODEOWNER checks before PR execution.

## Verification

- `node --test .github/scripts/tests/ci-routing.test.mjs
scripts/__tests__/e2e-shard.test.mjs`: 103 passed.
- `node --test .github/scripts/tests/ci-profile.test.mjs
.github/scripts/tests/ci-plan.test.mjs`: 31 passed.
- `actionlint .github/workflows/ci-routing.yml`: passed.
- `git diff --check`: passed.
- Mutation check: removing the snapshot-to-live-base comparison in a
temporary workflow copy makes the new side-branch regression fail,
proving it protects that ancestry guard.
- [Greptile:
5/5](https://github.com/paperclipai/paperclip/pull/18821#issuecomment-6612170970)
with a successful check on `abd6a8ce347228219d8e5127f34f57151788830e`;
both review threads are resolved.
- A regression reproduction on the original workflow selected GitHub
instead of AWS. The patched workflow passes that scenario.
- A read-only execution of the patched routing step against the actual
event for run
[41682867664](https://github.com/paperclipai/paperclip/actions/runs/41682867664),
using live GitHub metadata, selected
`runs-on/fleet=paperclip-public-pr-x64/env=public-ci`. This did not
allocate a runner or rerun CI.
- Full repository typecheck, Vitest, and build were not run in this
worktree, which has no installed dependencies. The change is limited to
workflow routing, its tests, and documentation. Broader CI checks remain
queued.

## Risks

- A stale admission roster can allocate the five-minute metadata gate.
The gate still checks current CODEOWNERS before it authorizes any PR
code on AWS.
- The routing runner group must authorize
`ci-routing.yml@refs/heads/master`. The fleet already exists; live
placement still needs confirmation after merge.
- Rewritten base history, changed PR heads, and unavailable identity or
ancestry evidence continue to deny AWS PR execution.
- Existing runs retain their previously resolved workflow. New runs use
this change after it reaches master.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, repository inspection, code
execution, and live GitHub API tools. The runtime does not expose the
exact serving model variant or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-03 12:47:16 -06:00
DottaandPaperclip 1c9ca5829f perf(ci): overlap Runner workloads and cache debug workspace builds (#18794)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Required CI checks protect its server and Runner contracts.
> - Recent full runs waited on general server files and the final Runner
lane.
> - That Runner lane ran package tests before native server tests.
> - PR jobs also rebuilt unchanged debug workspace binaries.
> - This pull request overlaps those workloads and reuses exact trusted
build inputs.
> - The benefit is a shorter critical path with the same test coverage
and AWS authorization.

## Linked Issues or Issue Description

Refs #18544, #18773, #18774, #18798, #18799.

**What existing behavior does this improve?**

The wall time of required PR tests and the precision of affected-test
selection.

**Current behavior**

General server and native files use two workers. The second Runner
Vitest lane runs its package shard and then the native server group.
Each Runner job compiles debug workspace units again. A Vite raw import
also retains its consumer for unrelated source edits.

**Proposed behavior**

Use three isolated workers for general server files and four for native
files. Reuse the two Runner slots for a complete package suite and a
complete native server suite. Restore all debug binaries only on an
exact input key. Record raw imports as explicit file inputs.

## What Changed

- Separate the Runner package and native server workloads without adding
CI jobs. Preserve the old command arguments for master-pinned workflows,
local commands, and other shard counts.
- Increase file workers while retaining fork isolation, serial cases,
and the shared-database guard.
- Add an exact debug workspace cache. Derive binary targets from Cargo.
Include source, fixtures, generated inputs, manifests, compiler
identity, flags, Cargo configuration, and checkout path in its key.
Discard incomplete restores. Only verified master pushes can save it.
- Keep older PR checkouts working when they lack the new cache helper.
- Track Vite `?raw` imports as repository file inputs. Keep unknown
loaders, untracked files, and opaque effects conservative.
- Add cache and coverage guards and document the behavior. AWS runner
authorization is unchanged.
- Keep paired test benchmarking available when install hooks correctly
disable materialized dependency reuse. The old benchmark asserted a
cache hit in that safe fallback.
- Wait for active dispatch work to finish before asserting idle reads.
Analyze the two 16,400-row database fixtures before their queries so
they have current planner statistics. Suppress only PostgreSQL notices
inside the cleanup transaction to avoid logging every cascaded table;
warnings/errors remain visible. Row counts, real queries, assertions,
database reset, and timeouts remain unchanged.

## Verification

- 196 affected CI tests passed, including routing, coverage, selection
failure fallbacks, shared-database serialization, and existing/new cache
guards. Final worker/cache adjustments also passed their focused checks.
- `pnpm build` and `pnpm -r typecheck` passed locally. Full test
coverage is being verified by the Linux CI profile; `pnpm test:run` was
not repeated as a full serial local run. The paired CI benchmark passed.
Both paired benchmarks passed, and full CI passed again after
integrating newer master commits. The external Paperclip Review app is
the only pending status.
- Actual debug artifacts remained fresh after simulating checkout
timestamps: Cargo completed in 0.82 seconds; the content key was
unchanged. This is local reuse evidence, not a measured GitHub cache
transfer.
- Same real UI inventory for a retention-test-only change: 861 files;
retained selection fell from 413 to 401. All 12 omitted files are
raw-input consumers; edits to their inputs remain covered by regression
tests.
- The first local worker comparison is invalid. Development dependency
links disappeared during its second run. The two-worker baseline also
had two macOS path assertions in company-skills. Neither result is
counted as a successful speedup. Dependencies were restored. A local
repeat was interrupted before producing results. The completed Linux
comparison below supplies the valid paired evidence.
- [Paired Linux
benchmark](https://github.com/paperclipai/paperclip/actions/runs/41671244016):
baseline and candidate ran the same 113 general-server files and 1,777
cases on one host. Wall time fell from 381.29s to 346.89s (9.0%). Both
exited successfully and file/case inventories matched exactly. The
fixture command took 31.77s versus 28.65s. This is one sequential pair,
excluding setup, queueing and the full CI critical path.
- [Repeat paired Linux
benchmark](https://github.com/paperclipai/paperclip/actions/runs/41675496862):
the same 113 files and 1,974 cases took 485.06s in the baseline versus
368.54s in the candidate (24.0%). File and case inventories again
matched exactly. The baseline includes newer master changes than the
first pair, so these are two independent comparisons, not repeated
timings of an identical tree.
- Initial full AWS profile: package suite passed 4,891 tests (289 files,
one skipped); native suite passed 172 tests (9 files, 12 pre-existing
platform/feature skips). Native execution took 239.06 seconds; the older
sample ran 165 native tests in 391.29 seconds. The package lane now
takes 11m01 including setup and debug compilation. This is an indicative
cross-run comparison, not a paired full-CI speedup claim.
- The initial run failed two UI fixtures, one serialized inbox
settlement assertion, and one dispatch idle assertion. The two UI
failures reproduced locally. The fixes preserve authorization,
admission, and zero-idle-read assertions. All four affected files passed
locally: 48/48 tests. Token gates passed. All four also passed in the
next AWS profile. That profile passed every other workload but timed out
the 16,400-row keyed attention fixture at its existing 180s limit; this
is accounted for by the explicit fixture-statistics change. Local
focused comparisons pass both large cases before and after; their
roughly 33s test execution is unchanged locally, so this is not claimed
as an additional speed gain. A full local file run passed both large
cases (7.57s / 18.05s) but hit the unchanged 30s teardown deadline on
its first test while emitting thousands of cascade notices. Cleanup now
suppresses those notices within its transaction; the complete file then
passed 34/34 in 107.72s. The latest-head AWS run passed the previously
failing shard: the keyed bulk case took 40.25s (previously exceeded
180s), the keyless case took 8.02s, and the complete attention file took
89.61s. The 16,400-row fixtures and original timeouts remain intact.
- [Full CI profile before master
integration](https://github.com/paperclipai/paperclip/actions/runs/41675497699)
passed on commit `5858956d4ac2c99c911ad2447b63e1f8fc84e31e`, including
all tests, build, typecheck and final verification. Greptile reviewed
that exact commit at 5/5; the only actionable review thread is resolved.
The separate Paperclip Review app is still queued.
- [Final merged-head
CI](https://github.com/paperclipai/paperclip/actions/runs/41678956312)
passed on `499aa206a6e03bf8f3249692ea731367a000591d`: 48 successful jobs
and one intentionally skipped file-selection job. Backup checkpoint
qualification and legacy security status passed. Greptile reviewed this
exact commit at 5/5. The PR is conflict-free; only the separate
Paperclip Review app remains queued.
- Integrated current master after #18798 and #18799 merged the inbox and
UI fixture fixes separately. Preserved master's inbox settlement fix and
verified its entire file (6/6 tests). Those three files are no longer
part of this PR's diff. Removed the temporary `profile-ci` label after
both successful benchmark pairs; the normal planner still schedules
every job because the CI configuration changes are global inputs.
- Second AWS profile: native tests took 229.97s with the same 172 passes
/ 12 skips; package tests took 427.44s with 4,891 passes / 10 skips. The
complete package job took 10m44, including setup and 79s debug
compilation.
- The PR uses the trusted workflow from master. Candidate worker/layout
code runs now; workflow-level debug restores begin after merge and the
first successful master cache writer.

## Risks

- Extra workers can expose load-sensitive tests. The final full CI
profile passed, but one run is not a long-term flake-rate measurement.
- The cache is an optimization only. Misses rebuild, and test commands
still execute. A new Cargo workspace member requires a cache-contract
review.
- Compiler alternatives remain experiments. Required TypeScript checks
are unchanged.

Typechecker experiment: three sequential checks per tool on identical
built projects, with TypeScript 7.0.2, Bun 1.4.4, and tsrs
0.20.1-ts7.1.0-beta. Median seconds (TypeScript / Bun / tsrs): shared
0.429 / 0.083 / 0.157; UI 2.554 / 0.390 / 0.740; server 9.949 / 1.194 /
1.782. TypeScript and Bun passed all three projects. All tools caught
the same four deliberate assignment, property, nullability, and
generic-constraint errors. tsrs reported one additional server TS2345
diagnostic in the run-dispatch adapter, so it did not pass the project
comparison. These local compiler times exclude generation and build
steps; they are not full CI savings.

## Model Used

OpenAI GPT-6 Codex. Tool use and code execution assisted this change.
The exact deployment identifier and context window are not exposed in
this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-03 11:17:53 -06:00
DottaandPaperclip 8c2502503d fix(github): preserve repository access during PR webhooks (#18805)
## Thinking Path

> - Paperclip manages AI agents and their work.
> - Agents need current repository access before they can start work.
> - Managed GitHub access checks run while webhook delivery can update
the same grant.
> - Pull request events update webhook health but do not change
repository permissions.
> - The refresh guard treated those health updates as access changes and
could exhaust its retry.
> - This change keeps repository preparation available during normal
pull request activity.

## Linked Issues or Issue Description

**What happened?**

A pull request webhook can make a managed GitHub repository refresh fail
with `github_access_changed`. Repository discovery then omits the failed
connection. Workspace admission can report that repository access is no
longer available, even after the checkout succeeds.

**Expected behavior**

Pull request activity must preserve valid repository access.
Installation changes and newer access snapshots must still stop a stale
refresh.

**Steps to reproduce**

1. Start a managed GitHub access refresh.
2. Process a pull request edit while the provider request is in flight.
3. Repeat on the bounded retry. The old guard rejects both checks
because `lastWebhookAt` changes.

## What Changed

- Use `accessRevision` and `lastAccessRefreshAt` as the existing access
fences. Stop using webhook delivery time as an access fence.
- Allow the existing commit merge to retain the latest webhook timestamp
and health after a pull request event.
- Exercise real webhook processing and PostgreSQL during refresh. Cover
a pull request event, an access conflict followed by that event, and
installation suspension.
- Document the distinction between access changes and delivery health.

## Verification

- Red: both pull request race cases failed on the old code with
`github_access_changed`.
- Green: all seven focused refresh cases pass. These include the
existing concurrent access-change checks and the new suspension case.
- Command: `pnpm exec vitest run
server/src/__tests__/tool-access-service.test.ts -t 'binds a managed
GitHub identity'`.
- Full affected group: 526 tests pass across the tool-access,
repository, and webhook suites.
- `pnpm -r typecheck` and `pnpm build`: pass.
- Current-head CI: 54 checks pass. The duplicate Paperclip review is
neutral. Two Storybook checks are skipped. Greptile and the completed
Paperclip review both rate this commit 5/5 with no findings. There are
no unresolved review threads.
- The duplicate local `pnpm test:run` did not complete. Its first four
chat shards passed. It was stopped after CI completed on this commit;
the full CI test matrix passed. The complete affected local group passed
separately.
- Retained earlier failure: the first affected-group attempt passed 525
tests and had one socket hang-up in the profile attention feed test.
That test passed alone without changes. The unchanged base tool-access
suite also passed all 498 tests, and the complete fixed affected group
then passed. The cause of the socket closure remains unproven.
- Environment: source checkout on macOS arm64, Node 26.4.0, pnpm 9.15.4,
disposable PostgreSQL. Provider responses and Cloud transport use
controlled fixtures. The webhook handler, refresh logic, transactions,
and saved grant reads are real.
- Live acceptance remains unverified. The available CLI token cannot
list GitHub App installations. The affected staging deployment still
serves the old code. This PR does not deploy or recover the original
task.

## Risks

- Removing an access fence could admit stale permission data. The access
revision and refresh timestamp checks remain. The real suspension
webhook regression confirms that stale provider data cannot restore
removed access.
- This change adds no retry, timer, schema change, or credential
forwarding.

## Model Used

OpenAI Codex, based on GPT-6. The exact runtime model ID and context
window are not exposed in this session. Used reasoning, code editing,
and terminal tools.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-03 11:15:49 -06:00
Nicky LeachandClaude 6ef37398c8 fix(build): fit typecheck and image build in 4 GiB (#18737)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Contributors, agents, and image builds run `tsc` to check and
compile the repository.
> - The repository uses TypeScript 7, which is a native binary. Node
heap flags do not limit it.
> - The server is one large program, so one `tsc` process needs about 10
GiB.
> - The operating system stops `tsc` under a 4 GiB memory limit.
> - This pull request checks the server in layers, removes the server
from the CLI program, and removes declarations and checks from the image
emit.
> - The benefit is that the full typecheck and the image `tsc` step now
complete in 4 GiB.

## Linked Issues or Issue Description

I found no duplicate pull request or issue. A search for `tsc`, memory,
typecheck, and OOM found only runtime memory work, which is a different
subject.

**What happened?**

`tsc` used too much memory, and the kernel stopped it with exit code 137
in resource-constrained environments. Measured peaks before this change:

| Command | Peak |
| --- | --- |
| Server `tsc --noEmit` | About 10 GiB |
| Server `tsc` emit, as in the Docker build | About 10.7 GiB |
| CLI `tsc --noEmit` | About 7 GiB |
| `pnpm -r typecheck`, whole process tree | About 10.2 GiB |

**Expected behavior**

The typecheck and the image `tsc` step complete under a 4 GiB memory
limit.

**Steps to reproduce**

1. Start a Linux container with `--memory=4g --memory-swap=4g --cpus=4`.
2. Install the dependencies on the base commit.
3. Run `pnpm -r typecheck`. The kernel stops the process with exit code
137.
4. Run `pnpm --filter @paperclipai/server build`. The `tsc` step needs
more than 4 GiB.

**Paperclip version or commit**

Base commit `09162fe893`, with TypeScript 7.0.2.

**Deployment mode**

Not applicable. This issue applies to development, CI, and image builds.
It does not change the server at runtime.

## What Changed

- Add `server/scripts/typecheck-layers.mjs`. It reads the import graph
on each run and runs one `tsc` process per layer. The layers are the
files below the largest import cycle, the cycle, the files above the
cycle, and the tests. Each layer reads the earlier layers as
declarations.
- Add `scripts/run-tsc.mjs`. It adds `--singleThreaded` when
`PAPERCLIP_TYPECHECK_LOW_MEMORY=1` is set. The server layers and the UI
typecheck use it.
- Add `scripts/typecheck-low-memory.mjs`. It checks one package at a
time in this mode. It has no `package.json` entry, as
`.greptile/rules.md` requires.
- Change the server `typecheck` script to build only the Runner
TypeScript output. It does not build the Runner release binary now.
`pnpm build` and `typecheck:build-gaps` still run the full Runner build
and its generated-file checks.
- Change the `tsc` step of the server `build` script to
`scripts/run-tsc.mjs`. The `Dockerfile` sets `PAPERCLIP_TSC_EMIT_ONLY=1`
for that build, so the image emits JavaScript without checks or
declarations. Without this variable, `build` still does a full check for
npm packages and CI.
- Use a non-literal specifier for the `@paperclipai/server` import in
`cli/src/commands/run.ts`. The import result already had no useful type,
and the literal specifier added the full server to the CLI program.
- Add a layered server typecheck step to the `pr-trusted` typecheck job,
because `typecheck:build-gaps` does not run this script.
- Update `AGENTS.md` and `doc/DEVELOPING.md`.

## Verification

Results on Linux use a clean copy of this branch, a new `pnpm install`,
Node 24, Rust 1.97.1, 4 CPUs, and a 4 GiB memory limit with no swap.
Results before the merge of `master`:

| Command | Result | Peak non-reclaimable memory |
| --- | --- | --- |
| `node scripts/typecheck-low-memory.mjs` | Exit 0, 0 OOM kills | 3,492
MiB |
| `PAPERCLIP_TSC_EMIT_ONLY=1 pnpm --filter @paperclipai/server build` |
Exit 0 | 3,656 MiB, from the Rust release build |
| Server single-program `tsc --noEmit --singleThreaded` | Exit 137, 1
OOM kill | Reached the limit |

Results on macOS on the merged head, with peak memory for the full
process tree:

| Command | Before | After |
| --- | --- | --- |
| `pnpm -r typecheck` | 10.2 GiB, exit 0 | 5.47 GiB, exit 0 |
| `node scripts/typecheck-low-memory.mjs` | Not available | 3.81 GiB,
exit 0 |
| CLI typecheck | 7.06 GiB | 1.68 GiB, before the merge |

Other checks:

- Compiler tests: new tests run the real compiler on a small fixture.
They prove that the layers emit declarations and pass, that a renamed
export fails the layer that imports it, and that a changed type fails
the test layer.
- Declaration imports: a new compiler test proves that types from
`.d.mts` and JSON imports stay correct in later layers. On the real
server, a wrong use of `AgentFileManifest` in the cycle layer failed
with `TS2353`.
- Coverage: a test on the real server source asserts that each source
file is in one layer and that no import goes to a later layer. The test
layer contains the remaining files. `src/__tests__` stays out of the
root list, as in `server/tsconfig.json`.
- Error detection: I added one type error to one file in each of the
four layers. The typecheck reported all four errors and exited with 1.
- Cross-layer errors: I renamed an export in the lower layer. The cycle
and upper layers reported the error and the typecheck exited with 1. I
reverted these temporary edits.
- Emit: full `tsc` and `--noCheck --declaration false --declarationMap
false` gave byte-identical JavaScript and source maps for 2,249 files on
the base commit.
- Runtime: `scripts/server-boot-smoke.sh node
server/dist-runtime/index.mjs` passed with a bundle from the emit-only
build.
- CLI: the esbuild bundle keeps the dynamic import, and `node --check`
passed.
- Tests on the merged head: `typecheck-layers`, `prepare-runner-vendor`,
`cli-invocation-safety`, the CLI `runtime` tests, and all 503
`.github/scripts/tests` tests passed. Before the merge,
`release-verify-workflow` and `runner-release-crate-cache` passed.
- Full `pnpm --filter @paperclipai/server build` passed before the
merge.

Failures during this work:

- The first low-memory run failed in the UI with `TS5023: Unknown
compiler option '-b'`, because the flag came before `-b`. I corrected
the argument order and added a test that runs build mode with the flag.
- The first rename check did not rename the export, because BSD `sed`
does not support `\b`. Its exit 0 was not evidence. I ran the check
again with `perl`, and the result above is from that run.
- The first version of the real-compiler fixture had a `TS2774` error in
its own source. The test found this error, and I corrected the fixture.
- CI failed `server-package-build-script.test.ts` on `1abc5e5a43`,
because that test reads the steps of the server `build` script, and I
had moved them to `build:prepare` and `build:assets`. My first search
for readers of this script did not include `server/src`. I removed those
scripts and `build:image`, restored one `build` script, and kept the
test unchanged.
- `GOMEMLIMIT` did not help enough, and I removed it from the plan. On
these steps, `3GiB` saved at most about 300 MiB. With default checkers,
the cycle layer was stopped with and without it, and the lower layer
went from 7 seconds to 151 seconds.

Not run or not proven:

- I did not run the full `pnpm test:run`, a root `pnpm build`, or a full
`docker build`. I expect CI to run the test and build gates.
- I did not measure the Docker build steps other than the server build.
- I did not run the 4 GiB checks on x86-64.
- I did not measure the merged head in the 4 GiB container. The macOS
result on the merged head is 3.81 GiB, and the merge added one source
file to the lower layer.

## Risks

- The margin is small. In the 4 GiB container, the cycle layer peaks
about 600 MiB below the limit, and the Rust release build in the image
build peaks about 440 MiB below it. Growth of the largest import cycle
uses this margin first.
- `node scripts/typecheck-low-memory.mjs` applies only to `pnpm -r`
packages. These commands still check the server as one program and need
more than 4 GiB: `pnpm build`, `test:e2e:runner:typecheck`,
`test:lifecycle-baseline:typecheck`, and the `tests/speko-native`
project.
- A local flow that used the Runner binary from a previous typecheck
must now run `pnpm --filter @paperclipai/paperclip-runner build`.
- The image does not include server declarations now. I found no
consumer in this repository. A downstream image that reads
`server/dist/*.d.ts` must change.
- An image build does not find type errors now. A typecheck in CI must
find them before the image build.
- The import scan uses a regular expression. A false edge can only make
a layer larger. A missed edge causes a `TS6307` failure, so it cannot
skip a file.
- The new CI step adds about one minute to the typecheck job.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

Anthropic Claude Opus 5.5 (`claude-opus-5-5`) through Claude Code, with
reasoning, tool use, and code execution. The runtime does not show the
context window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude <noreply@anthropic.com>
2026-11-03 08:53:35 -08:00
DottaandPaperclip f7ad1dc7ca fix(workspaces): make attached project repositories writable (#18770)
## Thinking Path

> - Paperclip lets people assign work to AI agents and inspect the
result.
> - A task can use repositories from more than one project.
> - Remote workspace preparation treated every additional project as a
read-only source.
> - This rejected valid Git repositories before the provider started,
even when no source was read-only.
> - The task page then hid the preparation reason behind a generic
failed-attempt notice.
> - This pull request prepares authorized repositories as writable task
copies and shows redacted workspace validation errors.
> - People can work across both projects and see the reason if folder
preparation fails.

## Linked Issues or Issue Description

**What happened?**

A remote task with a selected Git-backed project and another mentioned
Git-backed project failed before provider execution. It reported
`remote_workspace_readonly_sources_unsupported`. Neither project had a
read-only setting. The task notice showed only that the attempt failed.

**Expected behavior**

Each attached repository should be writable inside the task workspace.
This should preserve source access checks and saved work. A workspace
validation failure should explain its cause on the task page.

**Steps to reproduce**

1. Configure remote workspace storage and a native sandbox environment.
2. Select a Git-backed project for a task.
3. Mention another authorized Git-backed project in the task.
4. Start the task. Preparation rejects the additional source before it
starts the provider.

**Paperclip version or commit**

Reproduced against `dc9f387edc`, before this change.

**Deployment mode**

Managed remote workspace storage. Local regression checks use disposable
PostgreSQL and independent filesystem processes.

Related merged work: Refs #18403 and #18504. Those changes established
remote storage and metadata-only references. They still reject
configured cross-project repositories. No duplicate writable-repository
repair was found. Refs #18774 for the test-only retention-fixture repair
reused to unblock CI.

## What Changed

- Add every configured Git repository of an authorized referenced
project to `.paperclip-repositories/` as an editable task copy.
- Retain saved paths, refs, pins and files. Recheck retained project
access and source trust. Keep explicit read-only, local-source import
and remote feature gates.
- Keep committed snapshot repository coverage separate from later
requests. Honor configured default refs, resolve remote branch names,
and publish secondary checkouts only after checkout succeeds. Share
configured-ref resolution between root and attached-repository scripts.
- Include redacted workspace validation messages in the task
interruption projection and existing failure notice. Preserve Retry
permissions and render messages as plain text. Explain retained-folder
access and trust denials while preserving the dedicated low-trust
project-access path.
- Add source, authorization, redaction, UI and save/restore regressions.
Update the implementation contract and workspace maps.
- Reuse the reviewed test-only repair from #18774. Batch the
shared-workspace history fixture, verify its complete privacy-source
map, and drain owned test bodies before cleanup. Production retention
behavior is unchanged.

## Verification

- Red before repair: four source-resolution cases failed with the
reported read-only error. The task-error projection test also failed
because it omitted the cause.
- Green: 49 source and transport tests, 16 task projection and redaction
tests, and 10 UI tests. The assembled preparation check passes. All 48
remote workspace lifecycle tests pass. The full preparation suite passed
all 126 assertions but its cleanup hook exceeded 30 seconds. The
unchanged base reproduces the same cleanup timeout with all 126
assertions passing. The focused preparation check finishes cleanly.
- The real PostgreSQL/Git lifecycle checks cover both first-turn and
later project attachments. They verify the configured release branch,
saved edits, replacement allocations, unchanged source folders,
committed archive contents, and released writers.
- Review regressions were red before repair: the default ref became
null, later attachment failed during restore, non-default remote branch
checkout failed, and invalid secondary refs left partial checkouts. They
now pass.
- The local browser shows the workspace validation explanation and Retry
action. The fixture uses a saved failed run; this proves the error
display, not a successful live sandbox run.
- `pnpm -r typecheck` and `pnpm build` pass. Map, module-boundary and
token checks pass.
- A local two-turn acceptance probe repeated at `17ed67eaa7` used real
Codex CLI 0.165.0, `gpt-6-astra`, and `xhigh` effort. Codex wrote files
in both task repositories. The services saved them, removed the first
allocation and its Git sources, restored another allocation, and Codex
read the saved files and wrote a follow-up in both folders. This uses
the real source resolver and persistence services with a local
command-runner stand-in for sandbox transport. It does not qualify
Daytona, managed subscription forwarding, or the original task. The
first probe waited for stdin; closing the test harness pipe fixed that
setup error before provider work.
- `pnpm test:run` passed the first chat shard, then failed one chat
response concurrency assertion in the second shard. That case passes in
isolation on this head. The same isolated chat case passes on the
unchanged base. Both corresponding unchanged-base chat shards also pass
(351 and 324 tests). The cause of the earlier wider-suite chat failure
is not established. The preparation cleanup timeout and chat failure
remain part of this record.
- CI at `17ed67eaa7`: all other verification jobs passed. Browser shard
6 initially reported a request callback from the preceding test after
teardown; its single unchanged-code retry passed. Server shard 10 timed
out the 2,100-row retention confirmation fixture at 15 seconds on both
attempts. That exact case passes locally, but the repeated CI failure
required a repair. Its setup repeatedly rebuilt a shared-workspace
privacy map. The logs and failures remain part of this record.
- Reused the test-only repair from #18774 without changing its source
file. At `ab774e9418`, all 54 retention tests and all 25 ordinary
production privacy tests pass locally (79 total). Full CI
[41650626903](https://github.com/paperclipai/paperclip/actions/runs/41650626903)
passed on that commit, and its exact-head Greptile review was 5/5. The
fixture preserves its 2,100 rows, query-bound assertions, privacy-source
map, and completed-history test deadlines.
- The additional review identified retained-source access/trust denials
that still bypassed the workspace explanation. Real-resolver regressions
reproduced both plain-403 failures before the correction. Both now yield
a safe workspace validation explanation, while the dedicated low-trust
denial and saved workspace remain unchanged. The optional duplicate
ref-resolution block is also consolidated.
- Final review corrections: 65 source, transport and error-projection
tests passed, followed by all 48 lifecycle cases against an owned
disposable PostgreSQL database (113 total). The initial combined command
skipped the explicitly gated lifecycle suite; the subsequent dedicated
invocation enabled and passed all 48. Full workspace typecheck and build
pass. The first standalone lifecycle launcher lacked the repository
TypeScript loader; rerunning with that loader resolved its import setup
error. At previous head `7be02ea09c4ac76df560e8b517050cdf398f33f0`, full
CI [41654422329, attempt
2](https://github.com/paperclipai/paperclip/actions/runs/41654422329/attempts/2)
passed, Greptile is 5/5 on that exact head, and all review threads are
resolved. The first attempt timed out the unchanged voice-session
report/history case at 15 seconds; 3,027 cases in its shard passed. That
exact case passed locally, then its single unchanged-code shard retry
passed. The wider-suite timeout cause remains unproven. The completed
Paperclip advisory check is neutral; its earlier findings are corrected.
No staging deployment or original-task recovery is claimed.

- Master advanced while checks ran, producing conflicts in two adjacent
test additions. Merged `27d35314be` into this branch as
`d5c8d552939c86056abf8fe10833881b2ade41a4`, preserving both
workspace-error tests and the audited Stop/receipt tests. Kept workspace
maps to minimal corrections under the updated map rule. All 82 source,
transport and interruption cases, all 48 real-database save/restore
lifecycle cases, full typecheck, build, and map checks pass locally on
the combined code. Current-head [CI
41660719214](https://github.com/paperclipai/paperclip/actions/runs/41660719214)
and Greptile are pending; the earlier verified head has not been merged.

## Risks

- Additional remote project repositories are now editable task copies.
Shared source folders and upstream push permissions do not change.
- Snapshot coverage uses existing workspace metadata. Older workspaces
capture their previous inventory at reservation; successful save
publication advances coverage and snapshot identity in one transaction.
No SQL migration is needed.
- A retained copy can contain files from a project that is no longer
mentioned. Preparation rechecks that project's current access and trust
policy before reuse.
- Explicit read-only descriptors still fail. Source-less projects remain
metadata-only. Local folders still require import. No migration or
provider-pack update is needed.
- Error display reads only workspace validation errors. The existing
run-secret registry and username censor run before display truncation. A
redaction failure omits the explanation.
- The retained fixture repair pauses its row trigger only within the
isolated seed transaction, rebuilds the exact source map, and restores
the trigger before commit. A rollback regression and 25 ordinary privacy
cases pass. Its paged-case test budget honors the existing bounded inner
waits; production deadlines are unchanged.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, tool use and code execution.
The exact serving model ID and context-window size are not exposed by
this session. The test-only fixture changes are reused from #18774,
whose model record identifies OpenAI GPT-6.1 Sol. The optional live
acceptance probe uses `gpt-6-astra` with `xhigh` effort through Codex
CLI 0.165.0.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-03 15:33:44 +00:00
DottaandPaperclip b40e6edaea perf(inbox): combine startup reads and reduce refetch pressure (#18790)
## Thinking Path

> - Paperclip helps people manage AI agents and their work.
> - Mine shows the work and failures that need the viewing user's
attention.
> - A reload waits for account access, task rows, parent captions and
failure state.
> - Those reads form several browser request stages before useful rows
appear.
> - Live invalidations can also restart the same task-list request more
than once.
> - This change supplies startup data together and removes redundant
refresh work.
> - It preserves current authority, failure presentation, archive state
and row stability.

## Linked Issues or Issue Description

Refs #18645. Related: #18642. This change implements the read-receipt
behavior independently on current master. It does not use that PR's
branch or patch.

**What happened?**

Mine starts its primary request after the session, company and
board-access reads. It then requests parent captions and rich failure
context. Four observed loads spent another 0.45–0.70 seconds after the
primary rows arrived. One slower load waited 1.71 seconds for parent
context. The same run observed two HTTP 429 responses. These timings
identify request waits; they do not attribute the delay to SQL or Node
CPU.

Read receipts also invalidate general task collections and dashboards.
Overlapping parent and child invalidations can start two requests and
abort the first.

**Expected behavior**

The initial page should use one account-safe startup projection and one
complete Mine response. A read receipt should refresh the affected
viewer's inbox state. Each invalidation batch should refresh a covered
query once. Required captions and current failure state must be ready
before first reveal. Existing rows should remain usable during a
transient refresh error.

**Steps to reproduce**

1. Open a populated Mine inbox with parent tasks outside the visible
index and a current failed run.
2. Reload with browser HTTP cache retained and application query state
empty.
3. Inspect the session, company, board access, task-index and context
request sequence.
4. Open or mark a task read and inspect the unrelated collection
refetches.

**Paperclip version or commit**

Baseline: `44a9a043b80c18314d8dd89556f444dae696d3d6`.

**Deployment mode**

Authenticated board UI. Local proof uses the real APIs and database with
a synthetic session resolver. No hosted candidate deployment is claimed.

## What Changed

- Add optional, same-user `boardBootstrap` data to the existing session
response. Seed account-keyed company and board-access reads from it.
Keep ordinary endpoint reads for fallback, retry and live
reconciliation. A returning account cannot reuse revoked cached access.
Cache collection and later real refetches remain effective.
- Add the board-only Mine snapshot endpoint. Reuse the canonical issue
selector, private-task filtering, run-read decisions, secret redaction
and interruption/recovery presentation. Assemble the fixed 100-task
page, parent captions and bounded 200-run failure window on the server.
Start independent reads together. Optional source errors keep successful
task rows usable.
- Keep array-shaped source caches for archive and undo. Key Mine source,
context and reveal state by account. Validate the response's user stamp
before committing it. Remove array-only cross-tab Mine broadcasts, which
cannot carry its paired failure context. The server retains
authenticated in-flight coalescing.
- Scope read-receipt invalidation to the affected viewer's inbox, badges
and chat unread state. Keep company and task audit views fresh. Preserve
genuine task mutations, run updates and subscription-gap reconciliation.
- Remove covered scalar-prefix invalidations within a batch. Preserve
predicates, exact matches and different query/refetch constraints. A
later event can still refresh again.
- Retire Mine in-flight reuse after local company activity or run
lifecycle changes. A post-archive read starts fresh. Old work keeps its
admission slot until it settles, even if every HTTP client aborts. The
eight-compute limit stays in place.
- Add API, component and browser regressions. Extend the production
timing harness with matching API/UI artifact receipts, retained-cache
reloads, request status counts, layout checks and optional controlled
network latency. Update API and verification documentation.

## Verification

- Full `pnpm -r typecheck` passes.
- Full `pnpm build` passes.
- Token gates, map checks and diff whitespace checks pass.
- 72 Inbox component tests pass. Startup-specific checks pass, including
account switching, revoked cached access, malformed/absent bootstrap
data and cache collection. The canonical authenticated bootstrap route
also passes against real PostgreSQL.
- Six real PostgreSQL Mine route cases pass, including full equivalence
with legacy authorized projections, privacy, fixed bounds, membership
revocation, coalescing, archive freshness and aborted-client admission.
Four focused legacy coordinator controls pass. Six assembly tests pass.
- Refetch and invalidation regressions pass. Meaningful pre-fix tests
observed two request starts and one abort for overlapping invalidations;
the fix produces one start and no abort. The archive race test observed
the post-archive GET joining the old body before the fix.
- All 11 existing startup browser checks pass, including Tasks/Mine code
loading, desktop/mobile bounds, non-streamlined Coordinator, task
navigation, failed preloading and Back position. The nine focused
startup, fallback, partial-source error, rate-limit recovery,
archive/undo and geometry cases also pass. The 429 cases use the
inherited retry window. Archive and keyboard undo are corroborated
through the real API and reload. Authentication and failure fault
injection in these cases are explicitly simulated.
- Matched production before/after timings are complete. Full aggregate
Vitest coverage is left to CI. At 15:15 UTC, the final-head runner gate
and `review` workflow pass. The 45 build/test/policy jobs are queued;
the Build job has no `ubuntu-latest` runner assigned and has executed no
steps, so remote aggregate results remain unverified. Paperclip Review
and Superagent Security Scan are in progress. Superseded runs for this
PR were cancelled. No current-head check has reported a failure; the CI
checklist remains open. The remaining step is runner allocation and
completion of those external checks; persistent queueing needs the
repository CI owner's attention.
- Greptile completed on final head
`ecde295565309275c4f2fae903caf6892f1eaafd` at 5/5. The map-scope finding
is fixed and resolved; there are no open review threads.

### Matched browser timings

Five alternating baseline/candidate pairs per network scenario, measured
serially
in headful Chrome 156.0.8078.80 on Apple silicon with Node 24.22.2 and a
1440×900
viewport. Both production UIs use their matching real API revision
against one
fixed disposable PostgreSQL fixture: 34 tasks, 31 visible task rows, one
paused
agent and one terminal failure. No active agent/provider work. HTTP
cache is
retained; each initial sample reloads the document and clears
application query
state. Warm navigation and Back retain query state. CPU and throughput
are native.
The 100ms scenario uses CDP minimum request-to-response-header latency
without
request interception. It is a controlled request-dependency experiment,
not a
staging reproduction.

Values are median milliseconds with min–max in parentheses. Paired
saving is
baseline minus candidate for each alternating pair; its median differs
from the
difference of arm medians. Positive saving favors the candidate.

| Network / journey | Baseline | Candidate | Median paired saving |
| --- | ---: | ---: | ---: |
| Native / initial rows | 187.6 (128.9–208.5) | 191.7 (130.3–210.9) |
−23.3 |
| Native / Recent → Mine | 100.17 (99.90–101.87) | 100.07 (99.88–101.37)
| −0.16 |
| Native / task → Back | 70.45 (56.63–72.02) | 66.64 (56.52–67.71) |
+4.94 |
| 100ms / initial rows | 930.3 (914.1–1015.7) | 799.0 (697.1–826.0) |
+211.8 |
| 100ms / Recent → Mine | 100.09 (97.73–100.16) | 100.18 (96.65–100.98)
| −0.02 |
| 100ms / task → Back | 74.97 (62.77–75.82) | 75.47 (61.51–76.19) |
+0.35 |

The controlled-latency initial pairs all improve, saving 108.3–217.0ms.
Native
initial pairs have mixed signs (−67.5 to +78.1ms), so they establish no
reliable
native page-speed improvement. Warm and Back timings are effectively
unchanged.
Median primary-request start is 110.4→135.2ms natively and 497.8→480.9ms
with
100ms latency; these runs do not establish a large startup-only timing
gain.

API requests through the two-second post-reveal window fall from median
32
(32–37) to 27 (25–28) natively, and 37 (33–38) to 30 (25–32) with 100ms
latency.
All 20 samples preserve the same ordered 31 task links, first-row DOM
identity
and geometry. All recorded API responses are HTTP 200; zero unfinished
requests,
429s or JavaScript errors. Lower 429 incidence on staging remains
unproven.

Measured source: baseline `44a9a043b80c18314d8dd89556f444dae696d3d6`,
candidate
`4c12b2ef0ecf0754676e99bd6b9399e84408646c`. Final head
`ecde295565309275c4f2fae903caf6892f1eaafd` changes only two feature-map
files
and existing browser test expectations since that measured candidate;
production executable inputs are identical to the measured candidate.
Asset hashes, API
health revision receipts and every raw sample were retained. These
results do
not claim hosted-page improvement or deployment of this PR.

## Risks

- Startup enrichment adds work to the session read. Failure of this
optional projection falls back to the ordinary company and access
endpoints. It does not invalidate a valid session or replace per-request
server authorization.
- Account changes, stale cache entries and same-company navigation can
expose old presentation data. Account keys, principal stamps, reveal
scopes and canonical bootstrap replacement have dedicated negative
cases. Permission failures hide cached task rows; transient network, 429
and 5xx failures preserve them.
- Current failure state can differ from the historical failed run. The
snapshot uses the existing canonical rich projection and verified
missing-ID coverage. Partial context failures retain an explicit retry
path.
- Mutation retirement follows events delivered to the current server
process. This adds no cross-replica invalidation protocol or distributed
read-after-write guarantee.
- New UI assets require the matching API. Older UI/session consumers
retain their existing response and endpoint behavior. There is no
database migration, provider call or deployment change.

## Model Used

OpenAI Codex, based on GPT-6, with reasoning, code execution, browser
automation and delegated source review. The exact runtime model ID and
context-window size are not exposed by this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-03 09:28:57 -06:00
DottaandPaperclip db8a273562 fix(native): publish fresh retry sessions for later turns (#18713)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Native tasks save a provider session for later comments and monitor
checks.
> - The goal projection also records the run that owns the session event
sequence.
> - A fresh retry uses a new native session, but the projection accepted
only the old session.
> - The accepted checkpoint then rejected session publication because
the goal source still named the old run.
> - This pull request lets the current task executor advance that source
after a terminal predecessor with no unfinished goal.
> - Later turns can then use the fresh retry's saved session.

## Linked Issues or Issue Description

Related: #12669, #18343. I searched open and closed PRs for source
epochs and native task-session publication. I found no duplicate repair.

**What happened?**

A successful fresh native retry could retain its predecessor's
task-session pointer. A later comment or monitor selected the old
provider session. The goal source transition required both runs to have
the same native session. The terminal checkpoint then saved a
`suppressed_newer` publication result.

**Expected behavior**

The current task executor can publish its accepted fresh session. A
later turn resumes that session. Delayed events cannot restore the old
source or revive a cleared goal.

**Steps to reproduce**

1. Complete a native turn and retain its task-session row.
2. Admit a fresh session on the same task without deleting the row.
3. Complete that turn, then send an ordinary follow-up.
4. Before this change, the saved pointer can still name the first
session.

**Paperclip version or commit**

Reproduced on source commit `36df8933f0` with a PostgreSQL regression
before the production change.

**Deployment mode**

Source checkout. The affected producer runs for local and remote native
sessions.

## What Changed

- Permit a different native session to advance the goal source only when
its run holds the task execution lock and assignee, and the task is in
progress.
- Keep the terminal predecessor, native runtime, runner identity, absent
or completed goal, source sequence, and conversation reset checks.
- Test accepted session publication, a fresh heartbeat followed by an
ordinary resumed turn, stale events, current-owner loss, and unfinished
or unreadable goals.
- Add an opt-in live Codex file-persistence check. Update execution
documentation and both recovery maps.

## Verification

- Red: the new PostgreSQL publication regression failed before the
producer change. The saved session, display ID and goal source still
named the predecessor.
- Green: 72 distinct tests passed across the final focused runs of
`runner-goals.test.ts`, `native-task-session-publication.test.ts`,
`native-session-resumption.test.ts`, and
`remote-warm-session-recovery.test.ts`.
- The assembled heartbeat test admits three turns, opens two provider
sessions, resumes the second session once, and stores three results. It
uses a deterministic provider backend.
- `node scripts/check-maps.mjs` and `git diff --check` passed.
- Real local Codex acceptance passed on macOS arm64 with `gpt-6.1-sol`
and explicit warm mode. Three heartbeat turns saved three exact file
lines. The fresh second turn published its new normalized and provider
session IDs. The ordinary third turn retained both IDs. The fixture
closed its warm owners and removed its private credential copy and
workspace. The production code was at `450e15e`; the final test-only
commit selects explicit warm mode and uses the existing owned-home
cleanup helper. The production change is identical in the final head.
- The earlier per-turn fixture preserved all three file steps and
selected the correct normalized session, but provider-thread reuse
failed. `run.attach` reported that the Codex provider had pending
events; the safe fallback used another provider thread. This remains a
separate failure. The first fixture cleanup also failed on immutable
instruction assets. The owned-home helper fixed cleanup, and the second
per-turn attempt exposed the provider identity assertion directly.
- Full current-head CI passes, including typecheck, build, general and
serialized tests, Rust/Runner checks, all eight E2E shards, and the `ci
/ e2e` and `ci / verify` aggregate gates. Greptile is 5/5 on the current
commit, with no unresolved review threads. Broad local workspace checks
were not duplicated; the focused regressions and actual provider
acceptance above were run locally. No merge, deployment, or recovery of
an original task is included.

## Risks

- Source epoch changes affect saved goal state. The fresh-session path
requires current task authority and refuses unfinished or unreadable
saved goals.
- The change starts no provider work and changes no prior-owner recovery
guard. Unknown external outcomes retain their reconciliation hold.
- A prior session remains held when it lacks the required authority or
state proof.
- Per-turn provider-thread reuse remains an open coverage gap described
above. This change does not alter that attachment guard.

## Model Used

OpenAI Codex, GPT-6 family. The exact model ID and context window are
unavailable in this session. The agent used code inspection, tools, and
executable tests.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` OR (b) described the issue in-PR following the relevant issue
template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-03 06:12:00 -06:00
DottaandPaperclip 40ea7a9b89 fix(heartbeat): wait for inherited remote workspace writers (#18691)
## Thinking Path

> - Paperclip manages AI agents and their work.
> - A child task can inherit its parent's remote workspace.
> - The remote workspace permits one writer until that writer saves its
files.
> - Reservation reports an active writer as a generic setup failure.
> - The existing shared workspace wait does not cover inherited isolated
workspaces or a race at reservation.
> - This pull request sends verified active writer contention through
the existing scheduled retry path.
> - The child keeps a live execution path while unfinished files remain
protected.

## Linked Issues or Issue Description

**What happened?**

A native sandbox task inherited an isolated remote workspace from its
running parent. Setup failed with `The workspace still has an unfinished
writer or save operation.` The child became blocked before provider
execution and had no scheduled continuation after the parent saved.

**Expected behavior**

The child waits for the active writer through the existing workspace
retry path. It keeps its workspace binding. A stale writer or a stopped
writer with unfinished saves still requires reconciliation.

**Steps to reproduce**

1. Start a native sandbox task with remote workspace storage.
2. Create a child that inherits its isolated workspace or operator
branch while the parent is still writing.
3. Start the child. On the old code, atomic reservation raises a generic
setup failure.

**Paperclip version or commit**

Observed on `410b0e27015495ab8951768b5b0b94727de33785`. Regression
reproduced on source based on
`554a770c6f8e48e327e19f5208b575a5ec5bce30`.

**Deployment mode**

Authenticated managed server, external PostgreSQL, native Codex with a
Daytona sandbox. The failed attempt stopped before runtime selection or
provider startup.

Related: #18611 permits inherited remote bindings. #16371 adds waits for
reused shared execution workspaces. This repair handles active writer
contention at atomic remote reservation. #17156 proposes a separate
change to task workspace inheritance.

## What Changed

- Return a typed conflict with the exact active writer from the remote
reservation owner. Keep company, binding, access, and writer checks in
that transaction.
- Translate a recent running writer into the existing heartbeat
workspace wait. Keep stale, unknown, stopped, dirty, and uncertain save
fences. The writer task lookup uses its primary key.
- Preserve the admitted assignee role across preparation so reassignment
cannot turn an old owner into a guest retry.
- Add PostgreSQL regressions for isolated workspaces, operator branches,
native writer identity, unchanged saved authority, admission after save,
durable retry, Stop, and reassignment before contention reaches the wait
handler.
- Update the development guide and workspace verification recipes.

## Verification

- Red: both inherited isolated/operator preparation cases fail on the
old code. They receive `HttpError(remote_workspace_writer_pending)`
instead of a workspace wait. No provider or allocation starts.
- Green: those same cases pass after the repair. The assembled public
heartbeat cases also pass: one scheduled retry owns the task lock, no
sandbox lease is created, the original writer and saved authority remain
unchanged, and Stop prevents retry promotion.
- Ownership race red/green: changing the assignee during preparation
produced `wasIssueAssignee: false` before the review fix. The same
regression now preserves its original role. A real transaction fault
boundary also reassigns the task after reservation rejects it and before
the wait handler runs; promotion cancels that retry with
`issue_reassigned`.
- Test isolation: an initial combined placement cached the synthetic S3
run-log backend and failed twelve later preparation cases. The assembled
native tests now have their own process. The ordered reproduction and
all four complete affected suites pass after that change: 171 tests,
zero skipped.
- Four additional saved-file lifecycle cases pass against disposable
Docker PostgreSQL 17 with independent filesystem execution and local
object storage. They restore inherited shared, isolated, and
operator-branch files on a new allocation and retain the second-writer
fence. The other 42 cases in that file were outside the selection.
- `pnpm -r typecheck`, `pnpm build`, `node scripts/check-maps.mjs`, and
`git diff --check` pass on the final source.
- The earlier `pnpm test:run` passed all six chat shards: 1,828 tests.
Its remaining general-server phase was interrupted after final-head CI
passed. That local command began before the review fix and is not a
complete local full-suite pass.
- Final head `096235d8fc80033f92d8de1fcfa9835795ba0456`: 54 successful
checks/statuses, three skipped checks, and two neutral checks. None is
pending or failed. All build, typecheck, general/serialized tests,
Runner checks, and eight browser E2E shards pass in
[CI](https://github.com/paperclipai/paperclip/actions/runs/41544310900).
The PR is mergeable with no conflicts.
- Greptile is 5/5 on that exact head. Its ownership finding is resolved
and no review thread remains open. Paperclip Review also reports 5/5
with no findings; its check conclusion is neutral. Its earlier
status-conflict recovery completed through the ordinary review request
path.
- Local environment: macOS arm64, Node 26.4.0, pnpm 9.15.4, isolated
native PostgreSQL and the disposable PostgreSQL 17 lifecycle fixture.
The acquisition boundary is controlled in the focused preparation cases.
No live Codex/Daytona replay is claimed: the local environment and test
configuration lack the required test credentials.
- No deployment, merge, or original task recovery is claimed.

## Risks

- Incorrect contention classification could retry a stopped or
unverified writer. Only a running writer with a same-company task and
recent activity enters the wait path. Stale and terminal dirty cases
retain the conflict.
- Retries must not start another executor or release unsaved files.
Reservation remains atomic. The tests check unchanged writer authority,
no allocation before release, one durable retry, retained binding, Stop,
and reassignment before the conflict is caught.
- No API schema, database migration, provider configuration, model,
credential, trust, or approval changes.

## Model Used

- OpenAI `gpt-6.1-sol` through Codex. The context window size is not
exposed in this session. Used reasoning, tool use, code execution, and
browser diagnostics. No sub-agents were used.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass — targeted and chat results
are recorded above; the full local command was interrupted
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-02 19:26:59 -06:00
DottaandPaperclip 5955dd4eb4 fix(files): preserve saved reads during allocation cleanup (#18701)
## Thinking Path

> - Paperclip saves remote agent work in committed workspace snapshots.
> - Files can read that save after the writer finishes.
> - Compute cleanup can clear the recorded location while a saved
preview loads.
> - The current fence treats that physical cleanup as a change to the
saved bytes.
> - Permit only that one-way location removal for an already verified
saved copy.
> - Keep all logical-authority checks and live-read fences.

## Linked Issues or Issue Description

Refs: #18677. This fixes the remaining in-flight cleanup race after
saved reads began preferring the current committed version.

A Files preview can return `422 workspace_changed` when allocation
cleanup clears the location during archive loading. The epoch, committed
snapshot, source, clean state, and absent writer can all remain
unchanged. The extracted copy remains valid.

An original QA denial recorded this error eight milliseconds after
location cleanup. Its later successful read does not regrade the failed
attempt. The original audit does not reconstruct the full earlier
authority record. A controlled production-composed regression isolates
the same cleanup transition.

## What Changed

- Allow the recorded location to become null during a verified saved
read while every other parsed authority field stays identical.
- Remember observed removal so a reintroduced or foreign location still
rejects the read.
- Keep live reads, dirty state, active writers, changed epochs,
snapshots, and sources fenced.
- Add a real `createApp` content-route regression with PostgreSQL,
encrypted archive storage, and private-copy cleanup.
- Add negative controls for logical changes, foreign and reintroduced
locations, and live location removal.
- Update developer guidance and the workspace feature/access maps.

## Verification

- Red: the production `createApp` route returned exactly `422
workspace_changed` when normal archive loading overlapped location
removal.
- Green: all 108 Files route and authorization tests passed. The preview
returns the saved bytes, and its private extraction is removed.
- All 46 opt-in workspace lifecycle tests passed on one owned local
PostgreSQL database with local filesystem transport. The database and
server were cleaned up.
- `pnpm -r typecheck`, `pnpm build`, `node scripts/check-maps.mjs`, and
`git diff --check` passed.
- [Current-head
CI](https://github.com/paperclipai/paperclip/actions/runs/41550908692)
completed successfully on `45517b474b6866de2de6c618b7ff2193c93038ac`
(attempt 2). All PR gates are clean: 55 successes, 3 skips, and 1
neutral review result. The full suite ran in CI; it was not duplicated
as a long local full-suite invocation.
- [Original CI
failure](https://github.com/paperclipai/paperclip/actions/runs/41550908692/job/125638034035)
is retained: an unchanged mobile frame-sampling check collected 5 frames
where more than 5 are required; all sampled geometry was identical. The
exact unchanged local Chrome case passed, then one failed-job-only retry
passed on the same source. No assertion or time budget changed.
- Fresh exact-head Greptile review is 5/5 with no findings, inline
comments, or unresolved threads. The separate Paperclip static review is
also 5/5 with no actionable findings.
- No deployed acceptance is claimed by these local tests. The original
failed QA attempt remains failed.

## Risks

This permits one specific transition for an immutable saved copy: the
original recorded location can disappear. The company/workspace query,
epoch, snapshot, source, dirty state, writer, and
location-reintroduction checks remain. A live read still rejects
physical location changes. The change does not release compute, change
snapshot admission, or alter extraction limits. No schema or API-shape
change is required.

## Model Used

OpenAI GPT-6 through Codex with reasoning and code execution. The
runtime does not expose a more specific model identifier or
context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-02 18:33:49 -06:00
DottaandPaperclip 4814d1ab69 fix(ui): show composer images as rounded thumbnails (#18689)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - People use the new-task and thread composers to send text and files.
> - Images currently enter the text editor or appear with other files.
> - Large images interrupt text entry and make the two composers
inconsistent.
> - This pull request puts image previews above the text in both
composers.
> - People can check and remove images while they continue to edit the
text.

## Linked Issues or Issue Description

Refs: #13206. Related shared-composer work: #15091.

**What existing behavior does this improve?**

Image selection, paste, and drop in the new-task and thread composers.

**Current behavior**

Thread images enter the editor at the text cursor. New-task images can
appear inline or with file attachments. Images do not have one preview
size.

**Proposed behavior**

Show images above the text as 80 by 80 previews with rounded corners.
Use the existing spacing and radius tokens. Keep file attachments in
their current row. Add image references when the thread message is sent.

**Reason and benefit**

People can review images without moving or deleting message text. One
shared image row keeps both composers consistent.

**Breaking changes**

New image uploads stay outside the editor until send. Old inline-image
drafts remain readable. No server API or database changes are required.

## What Changed

- Add `ComposerImageAttachments` for local previews, removal, upload
status, and retry.
- Let `TaskChatComposer` own the image row and all image input paths.
Keep attachment IDs in the existing send flow.
- Let `NewIssueDialog` stage images and upload retained files after task
creation. Save file bytes in browser IndexedDB by account and company.
Restore them after reload. Clear them after creation. Show storage
errors. Merge saved file changes in one IndexedDB transaction. Delete
only the files removed by that draft. This keeps files saved by other
open tabs.
- Keep rich editing for old image Markdown. Use the same MIME and
filename checks for image previews in both composers.
- Save optional MIME data with thread draft attachments. Existing draft
records remain valid.
- Add desktop and mobile Storybook examples. Update the task feature map
and component tests.

## Verification

- `pnpm exec playwright test --config tests/e2e/playwright.config.ts
tests/e2e/board-attachment-receipts.spec.ts`: all 14 Chromium tests pass
against the real local Board, API, storage, and disposable database. The
suite proves image recovery in two open tabs after saves and task
creation, new-task image recovery after reload, byte-for-byte upload
content, cleanup after creation, rich editing of old image drafts,
upload receipt recovery, and removal during pending uploads.
- The first local browser attempt could not start because Chromium was
absent. Chromium was installed. A later run passed 12 tests but the new
legacy-draft fixture restored an empty body. That fixture wrote storage
while an empty composer was mounted. It now seeds before React startup
and uses a real uploaded image. The complete 13-test rerun passes. Early
component runs also exposed the new restore timing. Submit and file
controls now wait for restoration. The test helper now waits for React
effects.

- 316 focused tests pass across `TaskChatComposer`, `NewIssueDialog`,
`MarkdownEditor`, `composer-draft`, and `useStagedIssueFiles`. The tests
cover explicit file removal, file recovery, account and company changes,
storage failures, MIME-empty images, upload retries, and removal.
- The two-tab browser test failed on the previous commit: the second
save erased the first image. The fix merges files in one read/write
transaction and records explicit removals. The first fixed run reached
the final create step but had no text request after the other tab
cleared the shared text draft. The test now enters a fresh request
before that step. The full 14-test rerun passes.
- `pnpm check:token-gates`, `node scripts/check-maps.mjs`, `node
scripts/storybook-catalog.mjs`, and `git diff --check` pass.
- `pnpm --filter @paperclipai/ui typecheck` and `pnpm --filter
@paperclipai/ui build` pass after building the local plugin SDK
dependency. Repository typecheck and build stop because this workspace
has no `cargo`. Full CI must pass before merge. The first CI run passed
typecheck, build, and all unit-test shards. Its browser failure expected
the old inline upload label. The assertion now uses the thumbnail upload
status.
- The prior browser review used the production components with simulated
upload and submit calls. Desktop, mobile, and dark-theme captures were
accepted before this PR. Browser checks confirmed equal-size rounded
previews above the editor, no inline image nodes, no horizontal
overflow, and removal that preserves text. These checks do not prove
live backend persistence.
- Earlier repository typecheck and build attempts also stopped without
`cargo`. An earlier full test run was killed with a recorded
out-of-memory event during a server integration shard. It had no
full-suite verdict. One document-recovery test timed out during that
concurrent run. Its isolated rerun and later complete focused runs
passed; the initial timeout cause was not established.
- An initial catalog command in this workspace ran before dependency
installation finished. It could not load Storybook. The command passed
after installation. The first UI typecheck could not find plugin SDK
declarations while that package was still building. The UI typecheck
passed after `pnpm --filter @paperclipai/plugin-sdk build`.

To inspect the layout, open `composer-new-task--images`,
`composer-new-task--mobile-images`, `composer-add-menu--images`, and
`composer-add-menu--mobile-images` in Storybook. Select images with
different aspect ratios. Check removal, mixed files, failed upload and
retry, and draft restoration.

- Greptile reports 5/5 for commit
`9b9e93beeed80371f667ad2e1a9573e82332c05c`. There are no open review
threads.
[CI](https://github.com/paperclipai/paperclip/actions/runs/41544180330)
passed on this commit. All 58 checks finished: 54 passed, one review is
neutral, and three optional checks were skipped. The legacy Snyk status
passed. Paperclip also reports 5/5. No review threads are open.

## Risks

- Open tabs share the account and company draft. Atomic file writes keep
changes from other tabs. A reload can restore those saved files.

- Attachment state now controls when image references enter a thread
message. Tests cover pending uploads, failures, retry, removed images,
and retained upload IDs.
- New-task images use the existing staged-file upload flow after task
creation. A failed upload follows that flow's existing error behavior.
Browser storage can be unavailable or full. The composer keeps the files
in memory and shows a recovery message.
- Legacy inline-image drafts retain their original text. No migration is
required.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, tool use, and shell
execution. The exact runtime snapshot ID and context-window size are not
exposed in this session. The earlier implementation's model snapshot is
not recorded in the handoff.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details available in this session)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub references)
- [x] My remote branch name describes the change and contains no
internal Paperclip ticket ID
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-02 23:35:32 +00:00
DottaandPaperclip 919ddbf46d fix(workspaces): read committed files before live allocations (#18677)
## Thinking Path

> - Paperclip keeps task files in managed workspaces.
> - A final remote save commits a durable snapshot and clears writer
authority.
> - The old allocation can remain recorded while its transport becomes
unavailable.
> - Files still tried that live allocation before the accepted saved
version.
> - This PR reads the validated save when authority is clean and no
writer owns it.
> - Dirty work and active writers still require the live allocation.

## Linked Issues or Issue Description

Related: #18403 introduced remote Files access. #18665 fixes a separate
completion-settlement issue and is included in the base.

**What happened?**

A file preview returned `422 workspace_unavailable` after a remote task
had saved its files. Its clean authority still had a live location. The
same original bytes were readable from the committed save after that
location cleared. The exact original live transport failure is unknown.

**Expected behavior**

Once the workspace is clean and has no writer, Files reads its exact
current committed save. A retained location must not make accepted files
depend on remote command execution.

**Steps to reproduce**

Create a real committed workspace archive. Keep its allocation active in
the recorded authority. Clear dirty state and writer authority. Make
live execution unavailable, then request the ordinary file preview
route. Before this fix it returns 422. After this fix it returns the
saved bytes without a provider command.

## What Changed

- Select the saved-file loader before consulting a live location when
authority is clean and has no writer.
- Keep exact company, workspace, snapshot, archive, and authority-change
checks.
- Keep the live path for dirty work and active writers. Never substitute
their older saved bytes.
- Cover browse, resolve, preview, download, rejection controls, and
saved-copy cleanup through real routes and storage.
- Document the selection rule and update its feature and access-map
recipes.

## Verification

- Red: the new ordinary-route regression expected HTTP 200 but received
422 against the old service.
- A separate compatibility control reproduced the optional-loader
regression. Valid live reads still work when the loader is absent;
no-location reads still fail, and a configured invalid save never falls
back to live bytes.
- Green: 98 ordinary file-route and authorization tests passed with real
PostgreSQL and archive storage.
- All 46 opt-in remote workspace lifecycle tests passed against one
owned local disposable PostgreSQL database. Its database, server, and
files were cleaned after the run. No live S3 or provider flags were
enabled.
- Full workspace typecheck passed after the optional-loader
compatibility repair. Full build passed locally before that narrow
repair. All normal CI checks pass on the current head, including build
and server suites. The separate Paperclip Review job and the full local
test suite remain in progress.
- Feature/access-map validation and `git diff --check` passed.
- A read-only staging check preserved and verified the original saved
bytes. It did not rerun the agent or qualify the failed journey. The
fixed active-location path has local regression evidence; deployed
acceptance is pending.

## Risks

A clean workspace now uses the existing bounded saved-archive loader
while a location remains recorded. Each Files request can retrieve and
extract that archive. Existing disk, size, concurrency, cancellation,
and cleanup bounds remain. A dirty workspace or current writer still
uses live files and fails closed when they are unavailable. This change
neither releases compute nor changes access permissions. It does not
identify the original provider RPC subreason.

## Model Used

OpenAI GPT-6 through Codex with reasoning, code execution, and browser
tools. The runtime does not expose a more specific model identifier or
context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-02 16:00:04 -06:00
DottaandPaperclip aa6c9c3f25 perf(storage): overlap streamed S3 multipart uploads (#18659)
## Thinking Path

> - Paperclip manages AI agents and preserves their work.
> - Large workspace and skill objects use the shared S3 multipart
uploader.
> - The uploader waits for each part acknowledgement before it sends the
next part.
> - Storage request latency therefore accumulates once per part.
> - This change overlaps up to four streamed part requests.
> - One source reader preserves byte order and backpressure.
> - Failure cancels and settles active requests before cleanup.

## Linked Issues or Issue Description

Related: #18082 added the shared streamed multipart uploader. #18644
fixes temporary disk use during workspace capture. It changes a separate
stage.

**What happened?**
The shared S3 multipart uploader sends large object parts in sequence.
The code waits for each `UploadPartCommand` before it consumes the next
part. A controlled HTTP test confirms that only one complete part
reaches the endpoint while its acknowledgement is held.

**Expected behavior**
Upload independent parts concurrently within a fixed limit. Preserve
exact bytes, ordered completion receipts, source backpressure,
cancellation, and full snapshot verification.

**Steps to reproduce**
1. Upload a large stream through the S3 multipart provider.
2. Hold each successful part acknowledgement at a disposable storage
endpoint.
3. Observe that the old uploader sends only one complete body until its
acknowledgement returns.
4. Repeat with this change. Four complete bodies can reach the endpoint
before the first acknowledgement.

**Paperclip version or commit**
Current source checkout. The affected uploader was introduced in #18082.

**Deployment mode**
Local source verification on macOS arm64 with Node 24.22.1, pinned pnpm
9.15.4, and locked dependencies. The HTTP tests use synthetic data and a
disposable loopback endpoint.

## What Changed

- Send up to four part requests at once through bounded streams.
- Keep one source reader and retain the existing adaptive part-size
policy.
- Store successful receipts by part number before completion.
- Cancel a stalled asynchronous source read without waiting for the
source to produce more bytes.
- Preserve the first error. Cancel sibling requests and settle them
before multipart abort.
- Cover exact bytes, out-of-order acknowledgements, backpressure, the
concurrency limit, source errors, cancellation, and the real S3 HTTP
client.
- Document the transfer bound. Snapshot encryption, publication, and
full object verification retain their existing behavior.

## Verification

- Failing before the change: the held-acknowledgement regression
expected four complete part bodies and received one. The same regression
now passes.
- All 15 focused multipart and storage-diagnostic tests pass. The real
AWS S3 SDK sends four exact 8 MiB bodies through a disposable HTTP
endpoint before any acknowledgement. Completion retains source order.
- Controlled transfer comparison: one synthetic 64 MiB stream, eight 8
MiB parts, real S3 SDK and loopback HTTP, each acknowledgement delayed
100 ms. Original: 904 ms, peak one request. Fixed: 247 ms, peak four.
Both transfers verified every part hash and completion order. This is
local boundary evidence, not a hosted latency claim.
- A second safety regression reproduced cancellation waiting
indefinitely on a stalled asynchronous source. Abort-aware reads now
settle within the existing bounded cleanup budget.
- All nine existing encrypted snapshot storage tests pass after
correcting missing library aliases in the local embedded-Postgres
dependency. The failed setup attempt had no test verdict.
- Full workspace typecheck and production build pass. The rebased server
typecheck also passes.
- The first full `pnpm test:run` attempt stopped during chat test
collection with `No test found ... in lines ...` before a suite verdict.
The chat test and line-selection scripts are unchanged from master. A
retry after local Postgres dependency setup passed its first chat
shards, then was stopped to avoid redundant host load after current-head
CI passed every type/build/general/serialized/runner group. The
unrelated narrow-banner E2E job failed its first attempt and passed one
bounded retry; all current-head GitHub CI jobs are now green. There is
no full local verdict. The separate Paperclip native review concluded
neutral after reporting that work was paused; it supplied no substantive
code review.
- Commands: `pnpm -r typecheck`, `pnpm build`, and `pnpm --filter
@paperclipai/server exec vitest run --configLoader runner
src/__tests__/storage-s3-multipart.test.ts
src/__tests__/storage-s3-failure-diagnostics.test.ts
src/services/remote-workspace-snapshot-storage.test.ts`.
- Deployment and an end-to-end hosted acceptance run remain separate
steps.

## Risks

- Four requests per upload increase concurrent storage traffic. Multiple
simultaneous uploads multiply that bound.
- Shared source consumption could reorder bytes. One producer and
exact-content tests protect that boundary.
- Failed siblings could outlive multipart cleanup. Cancellation and
settlement tests protect cleanup order.
- Capture and full read-back verification still take time. This change
only targets serial multipart latency.

## Model Used

OpenAI `gpt-6.1-sol` through Codex, with reasoning, code editing, shell
execution, and automated tests. The context-window size is not exposed
in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-02 15:01:34 -06:00
DottaandPaperclip 33fc7fcddc fix(db): clean up owned PostgreSQL test servers (#18627)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Database, server, and CLI tests use real PostgreSQL fixtures.
> - Each fixture must own its server until PostgreSQL has stopped.
> - The old teardown returned after five seconds even when its server
remained alive.
> - A startup failure could then mark the host unsupported and skip
database coverage.
> - This pull request waits for owned shutdown and makes supported-host
startup failures fail collection.
> - A shared-server command reduces process creation while keeping each
fixture's database isolated.

## Linked Issues or Issue Description

Refs: #7756 for related development-process ownership. That
development-server issue remains outside this test-fixture fix.
Related PR: #16799 collects macOS startup diagnostics. This PR changes
test shutdown and failure behavior.

**What happened?**

Repeated test runs can exhaust macOS PostgreSQL semaphore resources. The
fixture abandoned slow shutdown and swallowed stop errors. The support
probe converted ordinary startup failures into skipped integration
coverage.

**Expected behavior**

Tests must stop their PostgreSQL servers, retain files if stop fails,
and report resource exhaustion as a failure. Fixtures on a shared server
must not close another database's clients.

**Steps to reproduce**

Start a fixture whose PostgreSQL stop exceeds five seconds, or make a
supported-host startup fail with semaphore exhaustion. The former helper
returned from teardown or reported unsupported coverage. The new
regression tests exercise both paths without exhausting host resources.

**Paperclip version or commit**

Source checkout based on current master.

**Deployment mode**

Local source development and CI tests.

## What Changed

- Add explicit ownership for test PostgreSQL children. Wait for fast
shutdown, then request immediate PostgreSQL shutdown if needed. Keep
cleanup idempotent and fail when exit cannot be confirmed.
- Publish reusable templates only after clean shutdown. Do not publish a
crashed or immediately stopped cluster.
- Stop owned children on POSIX worker signals and process exit. Preserve
test directories when shutdown fails. Remove conflicting dependency exit
hooks.
- Retry port collisions only. Fail collection for resource exhaustion,
unavailable configured servers, and other startup failures on supported
platforms. Preserve skips for explicitly unsupported platforms.
- Move administrative-server support into the common fixture used by
database, server, and CLI tests. Close clients at database scope and
migrate cloned templates before use.
- Add a directly invoked shared-server runner to own one test server and
run suites against separate disposable databases. Preserve child exit
status and support an existing disposable server.
- Unify cancellation: stop and wait for the test process group before
PostgreSQL teardown. Add nested-process coverage, real worker-exit
coverage, shutdown regressions, shared-database isolation checks, and
setup documentation. Replace ignored heartbeat completion polls with the
existing execution drain before asserting persisted outcomes.
- Finish owned cluster-directory cleanup after signal-driven
cancellation. Preserve prepared templates across shared-fixture tests.
Remove stopped directories asynchronously, using native removal on POSIX
with a Node fallback.
- Align database and CLI fixture hook budgets with the existing
30-second server budget. This lets the ten-second shutdown protocol
finish and report errors. The idle-sleep suite uses the existing
90-second fixture budget for its unusually large final directory
cleanup.

## Verification

- The semaphore-exhaustion regression failed against the old helper
because it resolved to `supported: false` instead of rejecting.
- All 37 focused tests pass on the final runtime code (`e4de00ab40`).
They include real worker exit, SIGTERM, nested-process SIGINT/SIGTERM
cancellation with PostgreSQL available during child cleanup, failed
template shutdown, unsupported platforms, stale SQL templates, and
directory removal. A child exiting with status 7 makes the shared-server
runner return status 7 after cleanup.
- Full local `pnpm -r typecheck` and `pnpm build` pass on the final
runtime code (`e4de00ab40`). Subsequent changes only adjust server-test
lifecycle waits, the idle-sleep cleanup budget, and documentation; the
server typecheck also passes with those final tests.
- A fresh shared-server run on `90b65fd8ad` passed all 68 database files
and 297 tests. Earlier preparation runs had two ten-second teardown
timeouts and a stale-template failure; the final helper migrates cloned
templates and permits the full shutdown budget. These earlier failures
remain accounted for here.
- The local full repository attempt stopped on a Discord receiver-lease
test after 338 passing chat tests. That exact case passed in isolation.
This full-suite attempt is not a pass.
- On `90b65fd8ad`, [server shard
6](https://github.com/paperclipai/paperclip/actions/runs/41496495253/job/125452949369)
and its one unchanged retry reported two 15-second cached-input
heartbeat timeouts and a 30-second idle-sleep teardown timeout. All ten
cached-input cases then passed locally with their original deadlines. A
local parallel run of the full files reported eight behavioral/hook
failures and two suite teardown timeouts (281 tests passed).
- Serial idle-sleep runs passed all 225 test assertions but overran the
30-second final hook. Tracing measured client closure in 4 ms,
PostgreSQL exit after 5 seconds, and synchronous directory removal
taking another 35 seconds. Asynchronous Node removal and native removal
also exceeded that hook under the full workload. Cleanup now remains
asynchronous and awaited, and only this heavy suite's final hook uses
the existing 90-second fixture budget. No PostgreSQL shutdown deadline
or test assertion was weakened. The serial run then passed the complete
idle-sleep file, including all 225 tests and teardown. Its heartbeat
file passed 63/64 cases, exposing an ignored three-second completion
poll. After replacing that poll with an execution drain, another timer
case exposed the same pattern (63/64 passed). All remaining ignored
completion polls now await execution drain without changing test
deadlines. The complete heartbeat file then passed all 64 tests. The
intentional asserted lock-contention poll is unchanged. The final server
typecheck passes, and a process audit found no PostgreSQL server left by
the completed local runs.
- On final head `2cf316d3f571e4516890cba743ecffeb9703cce3`, the
previously failing server shard 6, database lane, full typecheck, and
build passed. The [first CI
attempt](https://github.com/paperclipai/paperclip/actions/runs/41506358136)
then lost self-hosted runners in the canary and serialized-server lanes,
with additional jobs cancelled. The server-2 lane had one 30-second
timeout in the unchanged workspace-recovery HTTP Retry test (2,282 other
tests passed). That exact test passed locally with its original deadline
(28.78 seconds including imports). One unchanged retry of only failed
and cancelled jobs completed successfully on the exact final commit
(workflow attempt 2). The workspace-recovery timeout case and every
interrupted lane passed; successful first-attempt jobs were retained.
The additional Paperclip Review check remains queued, waiting for its
assigned agent; it has no unresolved GitHub review threads. Greptile
completed review on this exact final head at 5/5, with zero unresolved
review threads. All four original review findings and their threads are
resolved; additional Windows shutdown, cancellation-directory, and
template-reuse findings are fixed.
- `pnpm check:module-boundaries` and `git diff --check` passed. Post-run
process checks found no PostgreSQL servers left by the completed
verification runs.

## Risks

- Immediate PostgreSQL shutdown can require crash recovery. This
fallback applies to disposable test clusters and runs only after fast
shutdown times out.
- No process can handle `SIGKILL` or machine power loss. Host resource
cleanup remains a separate backstop.
- Directory cleanup on cancellation applies to the shared-server
runner's own cluster. Directly terminated test workers stop their
PostgreSQL process but retain disposable files for inspection. The
process-exit guard cannot await file removal.
- The two-second `pg_ctl -W` deadline bounds signal dispatch. It is
separate from the five-second and thirty-second server-exit waits. A
control-command failure fails cleanup and retains its directory; it does
not report successful cleanup or force-delete live files.
- Shared fixtures require a disposable PostgreSQL server and a role that
can create databases. The directly invoked shared command is opt-in; the
existing `pnpm test` command remains available.
- These changes do not stop unrelated development servers or delete
host-wide IPC resources. Clean shutdown uses the owned `pg_ctl` binary
on every supported platform. Its real control path was tested on macOS.
A Windows host was not available for live verification; POSIX signal
tests skip on Windows.

## Model Used

- OpenAI Codex, based on GPT-6. The runtime does not expose the exact
serving variant or context-window size. The agent used reasoning, shell
execution, code editing, and GitHub tools.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-02 14:24:48 -06:00
DottaandPaperclip 5f0bb518b0 fix(runner): handle blank assigned-tool schema references (#18637)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Native agents discover assigned app tools through a governed
gateway.
> - OpenCode receives search and call tools instead of the full app
catalog.
> - A blank optional schema reference selected schema lookup instead of
search.
> - Agents received an unknown-tool error and could abandon valid app
access.
> - This pull request treats blank references as search and explains
invalid schema requests.
> - Agents can find their assigned tools while the gateway keeps its
access checks.

## Linked Issues or Issue Description

**What happened?**

An agent called `paperclip_search_assigned_tools` with
`{"query":"github","schemaTool":""}`. The server tried to find a tool
with an empty name. It returned `assigned_mcp_tool_unknown` instead of
search results. The agent then reported that its GitHub tools were
missing.

**Expected behavior**

A blank optional schema reference must permit normal tool discovery. A
bad schema reference must explain how to search again.

**Steps to reproduce**

1. Assign an app tool to a native agent that uses on-demand discovery.
2. Search with `{"query":"github","schemaTool":""}`.
3. Observe the unknown-tool error instead of the assigned tool.

**Paperclip version or commit**

Reproduced from source before this fix, on master at d26628e35a.

**Deployment mode**

Native OpenCode with assigned MCP tools. The shared search code also
serves other native providers.

Related implementation: Refs #17740. A search for `schemaTool` found no
duplicate issue or pull request.

## What Changed

- Treat empty and whitespace-only schema references as normal search.
Accept a zero schema offset in this mode.
- Explain how to correct unknown references and positive offsets without
a reference.
- Test discovery, invocation, and revocation through the authenticated
OpenCode MCP bridge.
- Update tool descriptions, developer guidance, and the execution maps.

## Verification

- The three new regression cases failed before the fix.
- `pnpm exec vitest run
server/src/services/native-runtime/assigned-mcp-tools.test.ts`: 43 tests
passed after the fix.
- Existing tests cover schema chunks, work-mode restrictions,
revocation, approvals, and pinned tool catalogs.
- `node scripts/check-maps.mjs`: passed.
- `pnpm build`: passed.
- `pnpm -r typecheck`: passed.
- Full CI passed on commit `26d20fc19d846d46d7656a9f0160db5e81479dbc`:
55 successful checks, one neutral review check, and three skipped
checks. Nothing is pending or failing. This includes all CI test shards,
Runner verification, build, typecheck, security checks, and the canary
dry run.
- The duplicate local `pnpm test:run` completed its first five chat
integration shards without failures. I stopped the remaining local run
after the complete CI suite passed. The full local suite did not finish;
the complete-suite result is from CI.
- Greptile and the Paperclip code review each gave commit
`26d20fc19d846d46d7656a9f0160db5e81479dbc` a 5/5 score with no findings.
There are no unresolved review threads.
- The initial focused test could not collect tests until the fresh
worktree built its plugin SDK dependencies. `pnpm --filter
@paperclipai/plugin-sdk ensure-build-deps` resolved that setup
requirement.

## Risks

Low risk. Blank references and zero schema offsets now select normal
search. Nonblank references still require an exact authorized tool name.
Discovery and calls keep their existing gateway checks. The change needs
no database migration.

## Model Used

OpenAI Codex, based on GPT-6, with reasoning, tool use, and code
execution. The host does not expose the exact backend model ID or
context window size in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-02 12:07:28 -06:00
DottaandPaperclip 412834a860 test: overlap long recovery and maintenance waits (#18544)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - CI verifies recovery, execution authority, and background work
before changes merge.
> - Diff selection saves work, but a selected file still runs its cases
in sequence.
> - The three longest files in a recent full master run each took over
eight minutes.
> - Many of these cases must observe real lease expiry or idle periods.
> - This pull request gives independent cases separate fixtures so those
periods can overlap.
> - The benefit is a shorter test path with the same assertions and
observation windows.

## Linked Issues or Issue Description

Refs #18464.

The latest measured successful master [Cloud readiness
run](https://github.com/paperclipai/paperclip/actions/runs/41300933157)
spent 581 seconds in issue recovery, 569 seconds in native restart
recovery, and 512 seconds in maintenance server routes. File-level
selection cannot divide those long serial files. Shortening their lease
or idle windows would weaken the regressions they protect.

## What Changed

- Split issue recovery into four files with separate database and worker
fixtures. Keep all 18 cases.
- Split native restart coverage into recovery, lease renewal,
preparation, checkpoint cost, and disk-loss files. Keep all original 79
cases, including the existing container-qualified cases. The master
update also retains its newly added recovery cases.
- Close each native case's database clients after pending failure
reports drain. The shortened file must not rely on idle timeouts to stay
below PostgreSQL's connection cap.
- Run the native Runner lane with two isolated fork workers. Register
every new file in the lane and verify that the partition still includes
every suite.
- Give each maintenance case an owned database. Run at most two cases
together with test-local assertion contexts. Keep both real 90-second
quiet windows and all 17 cases.
- Preserve serial execution when any explicit shared
`PAPERCLIP_*_TEST_DATABASE_URL` is present. An admin URL that creates a
separate database per fixture can run concurrently.
- Refresh shard weights from the protected master run. Mark the initial
split-file weights as conservative estimates until master measures them.
- Anchor the attention-retention fake clock to PostgreSQL time. Its
fixed clock started trailing real database timestamps after 12:00 UTC on
November 1, causing an archive-deadline test to time out. Keep its
deadline assertions and timeout unchanged.
- Document the fixture and concurrency rules. Leave runner authorization
and workflows unchanged.

## Verification

- Final head `c9a4ff11b3ba81277341294c7721b34fb8705ede`: [full PR CI
passed](https://github.com/paperclipai/paperclip/actions/runs/41477848686),
including typecheck, build, all test shards, E2E, and the final
verification gate. The rollup has 55 successful checks, one neutral
review check, four expected skips, and no pending or failed checks.
Greptile reviewed this exact head at 5/5 with no actionable findings.
- November 2 master update: merge commit
`c9a4ff11b3ba81277341294c7721b34fb8705ede` resolves the native recovery
import conflict while retaining the new busy-row and remote continuity
cases from master. All 38 test-runner checks and the three new busy-row
cases passed locally.
- Retention verification after the master update: the first local full
run passed 52 cases and timed out at 15 seconds in the paged-backlog
case. That case passed in isolation. The unchanged master suite passed
all 53 cases (82.95 seconds), and a full PR rerun also passed all 53
(76.65 seconds). The initial timeout cause remains unproven; no timeout
or assertion was weakened.
- Previously verified head `fd288a8e8c88df54dcdca7b7e42366b019182782`:
[full PR CI
passed](https://github.com/paperclipai/paperclip/actions/runs/41312625439).
There are 55 successful checks, one neutral review check, four expected
skips, and no pending or failed checks. Greptile reviewed this head at
5/5 with no actionable findings.
- Issue recovery: 18/18 passed before and after the split on the same
local machine and PostgreSQL fixture path. Wall time changed from
**630.6 seconds to 319.7 seconds** (49% less). All case titles match.
- Maintenance also passed all 17 cases on AWS: structured file cost
dropped from **511.8 to 282.6 seconds** across the linked master run and
the first PR run. These are different CI runs, so the matched local
comparison below is the stronger isolated measurement.
- Maintenance: 17/17 passed before and after with the restored pinned
dependencies. Wall time changed from **488.1 seconds to 317.2 seconds**
(35% less). All 120 assertion lines remain. Both real 90-second windows
also passed a final targeted run.
- Native restart: 71 passed and eight existing container-only skips
before and after the split. Wall time changed from **632.1 seconds to
346.8 seconds** (45% less). All 79 cases and 254 assertion lines remain.
- `pnpm -r typecheck`: passed.
- `pnpm build`: passed.
- Extra TypeScript checking of the moved recovery and maintenance tests
passed. The standard server config excludes `src/__tests__`. A separate
check of attention-retention fixtures reports existing type errors; the
unchanged baseline has identical diagnostics, with none introduced by
the clock fix.
- `node --test scripts/__tests__/run-vitest-stable-shard.test.mjs
scripts/ci/test-selection*.test.mjs`: 61 passed.
- `pnpm test:run`: stopped in the second chat partition: 335 passed and
four failed (two GitHub retry-state assertions and two Teams timeouts),
after 339 passed in the first partition. These chat tests are unchanged.
All four pass in a focused run (19.1 seconds). The full-suite
ordering/load cause remains unproven. All three CI chat jobs passed. The
previously failing cases passed there in 1.3, 1.3, 2.4, and 2.2 seconds;
see [the chat job
log](https://github.com/paperclipai/paperclip/actions/runs/41309691650/job/124857580714).
The attention-retention timeout repeated in CI and in an isolated local
run. Its fake clock was fixed at November 1 noon, which had fallen
behind real PostgreSQL timestamps. Anchoring it to the database clock
passes all 53 cases; the failed case now takes 425 ms.
- The native CI lane passed all 162 runnable cases with eight existing
skips after client cleanup: **650.7 seconds on the earlier master run to
391.0 seconds on this PR**.
- CI found native connection exhaustion after the long waits moved out
of the main file. The same failure reproduced locally at a
100-connection cap. Per-case client cleanup fixes the shortened file at
that cap, and all five native files now pass together at that cap (71
passed, eight existing skips).
- Early attempts exposed a missed fixture reference and a missed
reporting setup hook during extraction; both were restored. The first CI
policy run also required moving the new native fixture under test
helpers; that boundary check now passes locally. A separate auxiliary
command picked up the host pnpm version and removed dependencies. The
original maintenance baseline reproduced the same missing-package
failures, so that failed attempt is excluded from timing comparisons. A
later unchanged-baseline run passed all 17 cases. The pinned install was
restored before the passing maintenance run.

The audit also covered heartbeat process recovery, deferred receipts,
chat, workspace recovery, attention, and connection management. Their
shared fake clocks/provider mocks or existing partitioning need
different changes. The 16,400-row attention case and the large
checkpoint stream remain intact because their size protects real limits.

## Risks

- Two isolated processes use more memory and database connections than
one. Concurrency is capped at two. Shared database overrides force
serial execution.
- Moving setup into helpers can change test lifecycle order. The split
suites keep the same case assertions and use independent process state;
focused runs and the full CI suite check the move.
- Split-file weights are estimates based on case timings from the linked
run plus repeated setup cost. The next protected-master refresh replaces
them. Weights never permit tests to be skipped.
- Local timing varies with host load. CI measurements after merge are
needed to establish the overall PR wall-time improvement.

## Model Used

OpenAI Codex, GPT-6, with reasoning, repository inspection, tool use,
and code execution. The exact backend revision and context-window size
are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass (changed suites and focused
reruns; the full local-run caveat is recorded above)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-02 10:19:24 -06:00
Nicky LeachandPaperclip aab87ce707 Prove workspace delivery before inspecting cleanup candidates (#18493)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Completed tasks leave workspaces that need safe cleanup.
> - Providers without ancestry inspection currently need a recorded
merged PR before cleanup can start.
> - A squash merge changes commit identity, so direct ancestry cannot
prove that delivery.
> - This change proves delivery from the finalized HEAD and captured
destination before storage inspection.
> - Fresh storage checks and a second delivery check still protect
removal.
> - This reuses the existing worker and receipts. It adds no table or
timer.

## Linked Issues or Issue Description

Refs #18410. Related: #13400 addresses workspace identity during
inspection; this change adds destination-aware delivery discovery.

## What Changed

- Resolve direct ancestry or discover an associated merged GitHub PR
without a recorded work product. Require exact HEAD, destination
repository and branch, and a reachable integration commit.
- Use the latest settled finalization receipt as a candidate. Reject
missing, failed, pending, conflicting, or changed evidence.
- Inspect storage only after positive remote proof for providers that
disable ancestry inspection. Recheck HEAD, branch, source identity and
delivery before removal intent.
- Add an optional provider capability for a specific PR recovery hint
and an optional prepared destination receipt. Older providers keep their
existing protocol.
- Wake cleanup when finalization writes settle or gain a workspace
binding. Keep remote-only retries for concrete unresolved delivery. Park
missing or unsupported candidate identity.
- Reuse the source project's explicit GitHub consent for delivery checks
through the existing authorization service. Revalidate the bound
repository and consent before removal; missing or revoked consent
retains storage without switching identities. Public sources remain
anonymous.
- Update the contracts, documentation, access map, and targeted
regressions.

## Verification

- Initial-head GitHub CI passed at
`5acd4c818be6f1764f8319f42891f9956c357c26`, including full build and
typecheck. Standard Greptile is 5/5 with no open threads. The first Apex
review scored 3/5 and found startup latency from remote proof lookups
and removal retry identity changes across provider capability changes.
Both corrections are pushed in `9d1a38df3d`, with the qualified
destination-ref length fix. Red regressions reproduced each issue.
Latest targeted checks passed: cleanup/worker 26, provider integration
41, SDK contract 8. Head `9d1a38df3d` passed standard and Apex reviews
at 5/5 with no open threads, plus all CI including full build/typecheck.
Canary Dry Run initially failed on an npm 404 fetching
`rollup-4.67.3.tgz`; the exact tarball subsequently returned HTTP 200,
and one targeted retry passed without source changes. Aggregate
verification also passed. After #18403 merged, master introduced
conflicts in shared workspace cleanup and metadata handling. Resolved
them in `7700832536`, preserving remote snapshot cleanup and Git
delivery-proof cleanup. Targeted merge verification: 93 tests passed in
the first run (59 opt-in skips), then all 16 remote lifecycle tests
passed with explicit database opt-in; map checks passed. The isolated
database is stopped. The merge head received standard review 5/5. Its CI
found two failures in unchanged test cleanup paths: native runtime
temporary-directory ENOTEMPTY and agent-chat cancellation lock timeout.
Those failures remain recorded and require successful final-head
verification. The subsequent project-consent change has targeted
coverage: authorization36, resolver33 and cleanup19 tests passed,
including revoked consent, anonymous public access and source-binding
races. The positive consent test failed before the fix. Current head
`c772679e05` has green GitHub CI, including full build/typecheck and
both previously failing test jobs, plus standard Greptile 5/5 with no
open threads. Neither cleanup failure required changes to its test path.
Apex also completed at 5/5 on this exact head (check `124651548532`,
summary updated 2026-10-31 20:45 UTC), with no open review threads. The
PR remains draft. Earlier failures remain recorded above.

- Final focused run on the rebased branch: **182 tests passed across six
files**, covering the resolver, delivery cleanup, provider bridge,
finalization notifications, existing workspace service and SDK
contracts. The disposable test database was stopped afterward.
- Targeted resolver tests: 33 passed. These cover ancestry, discovered
squash PRs, wrong HEAD/base/repository, removed integration commits,
bounded responses, cancellation and credential isolation.
- Targeted cleanup integration tests: 17 passed. Provider bridge
integration: 36 passed. SDK contract tests: 7 passed. Finalization
notification tests: 9 passed.
- A negative control that removed the final delivery check failed the
race regression as expected. The check was restored.
- Read-only live GitHub probe: the new resolver discovered PR #18410
from HEAD `3f5ade4cd42b707040e9a82fdaed343e3d736a09`, without PR hints.
It proved integration commit `6484f96c28bfb11a793ce4be6cc5ac15643a5a02`
reachable from observed master
`5bc029bf6c1db6647e96acea323f3723fd1d3eba`. GitHub also advertised the
exact original HEAD at `refs/pull/18410/head`.
- `node scripts/check-maps.mjs` passed. Structural checks do not prove
deployment behavior.
- Local tests are targeted by user request. Full build, typecheck and
test suite run in GitHub CI. A standalone server typecheck could not
complete because local Runner build declarations were absent; no
changed-file diagnostics were reported.
- Initial local execution hit a stalled pnpm wrapper, sandbox socket
denial and stale generated SDK declarations. Direct installed binaries,
the authorized isolated test database and rebuilt SDK resolved those
setup failures. No deployment was performed.

## Risks

- Destructive cleanup still requires fresh storage safety and lifecycle
checks. Remote proof alone never authorizes removal. A persisted removal
intent preserves existing recovery semantics.
- Legacy workspaces without an unambiguous destination or completion
HEAD remain retained. This does not guess the original default branch.
- Private repositories use the explicit standing GitHub consent on the
bound source project, with current membership, grant, repository access
and trust checks. No separate company token is required when that
consent is valid. Missing or revoked consent and unavailable or
rate-limited access retain storage; the worker does not borrow a task or
agent identity.
- A known undelivered commit keeps the existing five-minute retry
because external GitHub changes have no guaranteed ingress to this lane.
This can keep cleanup scheduled. Missing evidence parks instead.
- Providers need the new recovery capability to clean a squash merge
whose original HEAD is reachable only through its PR ref. Providers
without it remain conservative.
- The resolver currently supports GitHub.com. Existing local and
other-provider ancestry paths stay in place.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, repository tools and
parallel code agents. The exact runtime model ID and context-window size
were not exposed to this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-02 07:59:17 -08:00
DottaandPaperclip 71a20453e1 fix(workspaces): honor inherited remote workspace bindings (#18611)
## Thinking Path

> - Paperclip manages AI agents and their work.
> - Task creation can bind a child to its parent's execution workspace.
> - Native sandbox runs reserve that workspace before the provider
starts.
> - Remote reservation rejected inherited isolated workspaces and
operator branches because the original source task differed.
> - This check stopped valid child tasks before their existing access
and writer checks could run.
> - This pull request uses the persisted binding and existing
source-access checks to admit that continuation.
> - The benefit is that authorized child tasks can continue saved work
while the single-writer lock stays effective.

## Linked Issues or Issue Description

**What happened?**

A child inherited an active isolated remote workspace through normal
task creation. Its next run failed during setup with `Workspace
ownership changed.` No provider work started. The reservation guard
treated the original `sourceIssueId` as exclusive ownership, although
task creation had persisted a valid child binding.

**Expected behavior**

A bound child or follow-up can reserve the workspace after the prior
writer saves. Current task/run access, source visibility, trust, company
scope, closed-workspace state, and writer checks must still apply. The
original source task remains provenance.

**Steps to reproduce**

1. Create a task with an active saved remote isolated workspace or
operator branch.
2. Create a child without an explicit workspace override.
3. Confirm that the child inherited the execution workspace ID.
4. Start its native sandbox run. The old reservation guard rejects it
before provider execution.

**Paperclip version or commit**

Reproduced on source based on
`06bc8db75c71142ed108e0f331394c5187015d6a`. The same guard is present at
`1a6017d6460267ad89d7e1784e2b521c28d8e9ac`.

Related: #17156 proposes separate workspaces for child tasks. This
repair preserves the current inheritance contract and enforces the
remote writer lock. #16911 addresses child bindings across repositories.

## What Changed

- Remove the original-task equality restriction for active remote
workspaces. Keep the existing persisted-binding and retained-source
authorization path. Explicit task-root selection follows the existing V1
filesystem contract; task-assignment grants do not define filesystem
permissions.
- Keep closed workspace rejection and unfinished-writer checks.
- Add database-backed regressions for inheritance, replay, competing
children, an unbound task, private source data, company isolation, and
closed records.
- Extend real save/restore tests for inherited isolated workspaces and
operator branches. Keep shared-workspace discovery coverage.
- Update the development guide and workspace maps.

## Verification

- Red: before the repair, the inherited isolated/operator cases fail
with `Workspace ownership changed.` The shared case passes. The unfixed
suite has five failures and four passes.
- Green: 11 reservation cases pass with real PostgreSQL 18 in an
isolated Docker container.
- An earlier run of the four affected workspace/preparation/trust suites
passed 191 tests. The review follow-up passes all 15 selected
reservation/save/restore cases. Inherited cases remove the original
files, use a distinct allocation and target, restore the saved file,
append child work, and independently read that work from the child's new
snapshot. Shared-source discovery stays covered. The filter excludes 42
other integration cases.
- `pnpm -r typecheck`, `pnpm build`, `node scripts/check-maps.mjs`, and
`git diff --check` pass. A direct server typecheck also passes after the
final test edit.
- `pnpm test:run` stopped in its first chat shard: 338 passed, one
Discord receiver-lease setup failure, 1,478 outside the shard. The
failing test passes in isolation on both the unchanged baseline and the
fix. Its suite-order failure is not explained by that retry and remains
recorded. The unchanged baseline also fails three other Discord
publication cases in that chat shard, while its next chat shard passes.
This does not reproduce or explain the original lease failure; both
results remain recorded. CI is complete on `e697f6e1b8`: 54 successful
check runs, one successful legacy status, three skipped checks, and one
neutral check. No check is pending or failed. Greptile gives this commit
5/5 with no remaining findings. The security reviewer accepted the
V1-contract explanation; both review threads are resolved.
- Live sandbox acceptance remains unverified. The available test
credentials could not resolve the required sandbox snapshot. The
provider rejected creation before workspace execution, and a scoped
follow-up found no allocation. No live model turn, deployment, or
original-task recovery is claimed.
- Local environment: macOS arm64, Node 26.4.0, pnpm 9.15.4. Native
PostgreSQL startup hit the host semaphore limit; tests use disposable
Docker databases. No shared database was reset.

## Risks

- A bound child can now write after the prior writer releases the
workspace. Incorrect binding or access checks could expose source data.
Regressions cover unbound, private-source, and foreign-company
rejection.
- Concurrent children must not become two writers. A real transaction
race grants exactly one reservation; saved-file tests keep the second
writer blocked until save completes.
- No schema or migration changes. This PR does not change task-creation
inheritance, requested models, credentials, trust, approval gates, or
recovery budgets.

## Model Used

- OpenAI Codex, based on GPT-6. The exact serving model ID and context
window are not exposed in this session. Used reasoning, tool use, code
execution, and browser diagnostics. No sub-agents were used.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass — the targeted workspace
suites pass; the full local chat-suite failure and baseline comparison
are documented above
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-02 09:36:05 -06:00
DottaandPaperclip 7751fc3107 fix(server): complete volume-free controller admission and recovery (#18543)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Its volume-free web server must admit remote warm execution without
depending on a local disk.
> - Fresh run rows retain the initial legacy label during workspace
preparation.
> - The native runtime selector commits the execution mode later.
> - The earlier guard rejected valid remote runs before that selection.
> - This PR checks storage during preparation and the resolved lifecycle
during runtime selection.
> - Agent-file recovery also has to reconstruct disposable cache paths
from the retained remote directory.
> - The deployment test removes the complete predecessor home, including
immutable caches, to enforce that contract.

## Linked Issues or Issue Description

Refs #18518, #18529, #18533.

**What happened?**

A real Codex/Daytona deployment test failed during setup because the
volume-free workspace guard checked the initial run label. After fixing
admission, controller retirement first failed on an immutable skill
cache. Removing that cache exposed a production recovery failure: B
rejected the saved agent-directory path from A, even though the remote
execution identity was unchanged. The next live attempt recovered that
directory and transferred the same runner, but adoption then tried to
recreate provider launch assets from the deleted controller home.

**Expected behavior**

Allow remote workspace preparation before native selection. Reject
actual legacy and per-turn execution at the runtime boundary. Delete the
entire stopped predecessor home, including immutable caches, without
following links to shared dependencies. B must reconstruct its local
agent-file projection from the exact registered remote lease while
preserving the save baseline and unsaved remote edits. Reattaching an
already-running provider must not prepare a new launch or require the
old launch files. The full backend must recover the admitted
instructions from the matching durable run checkpoint.

**Steps to reproduce**

Run the explicit
`rolling-web-deployment.runner-codex.daytona.recover-controller` Product
E2E cell with a complete server/UI build, disposable PostgreSQL/S3, and
an owned Daytona fixture. The new boundary regressions also reproduce
the premature guard and missing runtime rejection without a model call.

**Paperclip version or commit**

The failures were observed on
`247552fe0719dcc92f7b42c50b658be6f624986d`. This branch is based on
`e122478368`.

## What Changed

- Validate Runner and remote workspace authority before runtime
selection without trusting the initial run label.
- Reject resolved legacy execution and local-source fallback, preserving
the native warm-policy check before admission.
- Rebind remote agent-file caches on ephemeral controllers and retrieve
their validated contents without uploading over the retained execution.
Preserve pending saves when the remote collector is unavailable.
- Restore over-quota remote directories without applying save quotas to
run admission; ordinary saves still enforce quotas.
- Skip provider launch asset materialization when adopting an existing
Runner. A real-process regression deletes the old skill/instruction
sources before reattachment.
- Recover admitted system instructions through Runner-owned checkpoint
validation for the same run, session and context digest. Fresh launches
still compose current instructions.
- Make the attention-retention test advance past its database-assigned
deadline, fixing a clean-master clock mismatch.
- Serialize remote collection and cleanup across controllers with an
operation-scoped Postgres advisory lock; fence stale cache-path updates.
- Keep synthetic deployment probe tasks in a separate disposable company
so they cannot block the business completion oracle.
- Share the launcher's directory cleanup with rolling retirement. Reject
a symlink root and skip linked descendants.
- Test admission with real PostgreSQL transactions and cleanup with real
read-only directories and external symlinks.
- Update developer documentation and the canonical qualification record.
Broader deployment acceptance remains in progress.

## Verification

- `pnpm -r typecheck` and `pnpm build` passed.
- All 156 workspace preparation, runtime selection and ephemeral
contract tests passed. Two new regressions failed before the source fix.
- Seven focused Product E2E cleanup/replacement tests and `pnpm
test:e2e:runner:typecheck` passed.
- `pnpm test:run` stopped at an unrelated 15-second chat integration
timeout after 338 passes. That exact test passed in isolation without
increasing its timeout. The later full-suite shards did not run.
- `pnpm test:e2e:runner:unit` reported 5,898 passes and 13 failures.
Clean master reproduced 11 failures in unchanged onboarding
expectations, operating receipts, Pi catalog assertions, workflow
bootstrap counts and embedded PostgreSQL startup. The other two workflow
assertions were fixed by the intervening master commit. These failures
are retained, not counted as passes.
- All 122 workspace-preparation tests pass after the reviewed
host-fallback fix. The first broader attempt exposed a test environment
leak; restoring the ephemeral flag between cases resolved it.
- Agent-directory and instruction regressions passed 179 tests. Five
focused cache-loss cases pass: different home, same path on an empty
filesystem, foreign lease, concurrent controller, and missing collector.
- The live fixture at `a18f6b85a3` gracefully stopped A and deleted its
entire home, then failed the 420-second remote reattachment deadline on
the saved local agent-directory path. That failure is retained; exact
owned sandbox cleanup was independently confirmed. The next live attempt
at `e14ca5f3e9` restored the cache and transferred the same runner, but
failed while rematerializing launch assets from A. Both failures are
retained and their owned sandboxes confirmed absent. No active-overlap,
ten-deploy, or production-canary acceptance is claimed.
- All 71 related Runner adoption/recovery cases pass, including the new
removed-context regression (failed before the source fix).
- The revised full agent-directory suite passed 110 cases and failed
three cleanup timing cases. All 20 cleanup/cache-loss cases then passed
in isolation with unchanged timeouts, including over-quota recovery.
- Server and Runner TypeScript checks pass after the latest corrections;
the live retry remains pending.

- The live test at `67714af9ff` adopted the same remote execution after
A was deleted, then failed while the full backend read the retired
instruction bundle. All owned sandboxes were independently confirmed
absent. Its regression now passes with actual backend recovery and no
new thread or turn. All 59 backend factory tests and focused checkpoint
identity tests pass. Runner and server TypeScript checks pass; the exact
committed server build passes. A fresh paid-model retry followed.
- The attention-retention CI timeout reproduced on clean master. The
deadline correction passes all 53 tests in that file with unchanged
timeouts.

- The real `cd690de4d3` run transferred the same runner/session after
deleting A, completed, and completed the next revision. During handoff,
372 reads and 38 saves had zero failures; all 38 saves were verified.
The full attempt was interrupted because the probe's open task
contaminated the business company oracle. This remains incomplete
evidence. The scope regression fails before the fixture fix, then
passes; all nine deployment support tests and E2E typecheck pass. All
three owned sandboxes were confirmed absent and temporary
credentials/storage were cleaned up. A clean corrected attempt is
running.

## Risks

- The runtime guard must still reject legacy and per-turn execution
before dispatch. Tests cover these refusals and a valid resolved warm
policy.
- Directory permission changes apply only during cleanup of stopped,
test-owned homes. Traversal does not follow symlinks. This changes no
production cache permissions.
- Cache reconstruction must not change remote execution authority or
rebase the original save baseline. Tests verify foreign-lease rejection,
preserved receipts, and absence of local-to-remote upload.
- Postgres locking is scoped to active remote file work and adds no idle
polling; local/durable-server locking remains unchanged.
- No schema or public API changes. External conversation exemptions
remain unchanged.

## Model Used

OpenAI GPT-6 Codex, with reasoning, repository editing, shell execution
and live integration-test tools. The exact runtime model variant and
context-window size are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Latest real qualification at f5915fdc33: both empty-home replacements
completed with 523 reads, 53 saves and 53 verified saves, zero probe
failures. The active remote execution survived and completed once; saved
project bytes and the later useful answer passed. The full workflow
remains FAILED: the later continuation reset its native/provider session
and the public run row lacked the native terminal contract. These newly
exposed compatibility/projection gaps are tracked in the next
implementation slice; this PR is not a claim of full Railway
qualification. All owned Daytona sandboxes were independently confirmed
absent after cleanup.

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-11-01 08:24:14 -06:00
DottaandPaperclip 5e4cc01073 feat(workspaces): keep remote files off the webserver disk (#18403)
Keep native sandbox workspace files independent of the webserver disk. Use encrypted saved versions and Postgres ownership so a replacement server can recover files and continue work. Enable the path by default for new eligible workspaces when durable storage is configured.

Preserve explicit opt-outs and existing host workspaces. Include safe snapshot repair, Files access, import, migration and retention. Bound saved-Files resources, preserve imported Git recovery, reject unfinished Git operations, publish immutable concurrent captures, and verify permanent object-version deletion.

Validated 471 targeted local controls, build/typechecks, all 40 CI partitions, fresh Greptile 5/5 and security review. The PR records original failed attempts and scoped retries.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-31 14:54:01 -05:00
Nicky Leach 6484f96c28 fix(workspaces): inspect storage only when needed (#18410) 2026-10-31 11:43:18 -07:00
DottaandPaperclip e40de0c9e8 perf(ci): refresh test weights and narrow graph dependencies (#18464)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Contributors need fast, reliable CI feedback.
> - Diff-aware CI selects test files and partitions them into runner
jobs.
> - Stale cost estimates put several slow suites on the same runner.
Broad imports also couple small tests to large modules.
> - This PR refreshes test costs, runs independent graph discovery in
parallel, and narrows three dependency boundaries.
> - Selection safeguards and CODEOWNER-only AWS routing stay in force.

## Linked Issues or Issue Description

Refs #18398. This follows the audit of [PR #18427's verification
run](https://github.com/paperclipai/paperclip/actions/runs/41169978784).

The audit found 403 selected general-server files without timing
weights. Three suites measured at 232s, 122s and 116s shared one shard
because each received a roughly 2s fallback weight. Local graph
discovery across four projects took 43.7s serially and 21.7s with two
workers. A reverse-order repeat took 37.7s serially and 22.6s with two
workers. Both comparisons produced identical selection results. This is
a local measurement, not a claim about production CI speed.

## What Changed

- Refresh general-server costs for 1,285 of 1,309 current files and
serialized costs for all 163 files from two successful protected-master
Cloud readiness runs. Retain prior costs for unmeasured files, including
dedicated chat and native-runner suites.
- Record passing server file costs, including collection, setup and
environment preparation. A weekly hosted workflow validates trusted
source runs and opens a timing-only PR. It tests shard coverage, pauses
while a refresh PR is open, and never merges automatically.
- Discover at most two project graphs concurrently in isolated,
heap-limited Node processes. Cache repeated inventory reads within one
selection. Worker errors and timeouts retain the full task plan.
- Fetch only the merge commit and parents for the selector. A real
shallow-clone regression proves the complete diff still includes more
than 300 files, renames and deletions.
- Share the identical log viewer and run details between both
AgentDetail pages. The viewer test imports the shared implementation and
runs each of its 13 distinct cases once.
- Extract the pure API error class while preserving the API client's
public exports. Import delivery work signals through their existing
narrow DB export.

## Verification

- PASS: `pnpm -r typecheck` and `pnpm build`.
- PASS: 284 CI selection, timing, shallow-diff, sharding and routing
tests.
- PASS: 74 further cache, routing and graph-proof tests.
- PASS: 94 targeted UI assertions across the viewer, run invocation, API
errors/client and progress helpers. All 76 assertions in the 12 server
suites made independently selectable also pass.
- PASS: `pnpm check:token-gates`, module-boundary checks, YAML parsing
and `git diff --check`.
- PASS: [Full PR CI and required `ci / verify`
aggregate](https://github.com/paperclipai/paperclip/actions/runs/41206683345),
including all 12 general-server shards, all nine serialized shards,
workspace groups, chat suites, Runner lanes and build checks.
- PASS: [GitHub hosted real-workspace selector and cache/routing
qualification](https://github.com/paperclipai/paperclip/actions/runs/41206683205).
- PASS: Both Greptile and Paperclip reviews are 5/5 with no actionable
findings or inline comments on `7dc65c51b8`. The PR has no merge
conflicts.
- PASS: The production refresh parser accepted all 107 structured
file-cost records from a real successful server CI job, including
setup/loading cost.
- Local `pnpm test:run` completed all six chat shards successfully. The
duplicate monolithic local run was stopped after the complete remote
suite passed; it was not completed locally.

The focused log-viewer command improved from 18.84s (26 duplicate
variant cases) to 8.49s (all 13 distinct behavior cases). The dependency
audit confirms 12 server files and the API-error test no longer need
conservative always-run retention. Repartitioning the audited PR with
the new costs changes the slowest shard from 810s to 591s of summed
historical test execution (1,124 of 1,142 files measured). This is a
workload simulation, not measured new CI wall time.

## Risks

- Two graph processes use more peak memory. Each has a 2 GiB heap limit
and a three-minute timeout. Any failure preserves the original task
plan. Real workspace qualification runs in GitHub CI.
- Historical logs contain test/hook costs only. New reporter records add
loading/setup costs after merge. The manifests identify measurement
coverage and source runs. These weights change placement, never
permission to skip tests.
- Runner load adds timing noise. The refresh uses medians and requires
at least 90% measurement coverage in each lane.
- GitHub may require approval to run checks on a PR created with
`GITHUB_TOKEN`. Refreshes remain reviewable and do not merge themselves.
- The shared viewer is a mechanical extraction. Both pages retain their
existing exports, and the behavior assertions remain covered. AWS runner
authorization is unchanged.

## Model Used

OpenAI Codex, GPT-6, with repository inspection, reasoning, code
execution and GitHub tools. The exact deployment ID and context-window
size were not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub references)
- [x] My branch name describes the change and contains no internal
Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass (focused checks and six
chat shards; complete suite passed in CI as detailed above)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-31 11:05:12 -05:00
Dotta 12b0cc6304 fix(chat): recover committed native Agent Chat replies (#18465)
## Thinking Path

> - Paperclip manages agent work and keeps its results available to
users.
> - Agent Chat needs a visible reply before the conversation can wait
for more input.
> - Native result commitment and reply presentation are separate
obligations.
> - A completed conversation can retain a valid final message without a
saved reply.
> - Existing reply recovery excludes these completed conversation turns.
> - This pull request repairs that persistence gap through the existing
recovery worker.

## Linked Issues or Issue Description

**What happened?**

A native Agent Chat turn completed successfully and saved its workspace.
Its accepted result and final assistant message were durable, but no
reply appeared in the conversation. The chat stayed active. The
deployment hiring journey in #18351 then reached its deadline while
waiting for the first reply.

**Expected behavior**

Recover the exact accepted turn's final reply once, then use normal
conversation settlement. Keep later user input active. Do not run the
agent again or replace a selected or deleted reply.

**Steps to reproduce**

1. Create an active conversation with one admitted native turn.
2. Commit an accepted DONE result and a final-channel assistant message
for that exact run, session and turn.
3. Finish workspace finalization before live heartbeat reply
presentation. Leave no saved reply.
4. Run normal response recovery. Before this fix it finds no
conversation candidate and leaves the chat active.

**Paperclip version or commit**

Reproduced with actual services at frozen master
`8bcc5a01edd5d87540401521e6f30d3df43e1848`. The production predicate
also exists in the deployed revision that exposed the failure.

Related work: #18351. The broader receipt and recovery work in #18118
and #18409 does not touch these source files.

## What Changed

- Discover unanswered committed Agent Chat turns through the existing
native response presentation worker.
- Recheck company, agent, responsible user, current execution and
conversation generation under the normal transaction locks.
- Require the accepted result digest and an exact final message from the
same native run, session and accepted turn. Keep external publication
authority separate.
- Commit the reply and presentation receipt before normal conversation
settlement. Later input stays active. Recovery does not repeat agent
work.
- Preserve skip decisions and selected or deleted replies. Add database
controls for foreign identity, stale sessions, partial commitment,
duplicates and ordinary internal task behavior.
- Document the recovery boundary in the developer guide.

## Verification

- Real-service RED/GREEN uses all 418 canonical migrations in isolated
PGlite and the exact new regression fixture. Before the fix: zero
candidates, no reply, recovery returns false and the chat stays active.
After the fix: one candidate, one exact reply, recovery returns true and
the chat waits. A repeat returns false and creates no second reply.
- All 20 canonical regression cases pass locally through a fixture-only
PGlite bridge. Only local database provisioning and `createDb` selection
differ from the normal embedded PostgreSQL fixture. Production services,
SQL queries, transactions, protocol validation and assertions remain
real. Linux embedded PostgreSQL CI is required before merge.
- Focused current-source no-emit typing passes for both production
modules and the new regression file, with normal Express augmentation
and source aliases. The broader local presentation/ownership and
conversation-settlement PGlite bridge run was interrupted before it
reported results; it is not counted as a pass. No repository-wide local
build is claimed from borrowed workspace dependencies. Clean-build CI
and canonical PostgreSQL consumer tests remain required.
- `git diff --check` and the scoped source/test secret scan pass. No
captured run data, credentials or private target identities are
committed.
- No live journey retry, deployment, configuration change or test-plan
admission was performed. The original failed journey remains failed;
this production fix still needs deployed qualification through the
unchanged journey.

- Current-head [canonical Linux
CI](https://github.com/paperclipai/paperclip/actions/runs/41207018345)
passed all 57 terminal checks with no failure or pending check. The new
20-case database regression actually passed in [server shard
8](https://github.com/paperclipai/paperclip/actions/runs/41207018345/job/124555006090),
at 13:59:25 UTC (2,643 ms). Typecheck, build and the existing consumer
lanes passed. Fresh [Greptile
review](https://github.com/paperclipai/paperclip/pull/18465#issuecomment-6544208002)
on exact `f32a432e10b377ae6277d6f728995d5fedcf9d7b` is 5/5; the
review-thread inventory is empty with no pagination. No live deployment
or journey pass is claimed by these checks.

## Risks

Eligible active conversations can gain a previously missing reply.
Recovery accepts only the exact saved final message under its accepted
result and current conversation identity. It does not run a model,
repeat hiring or change a prior test grade. Reply persistence precedes
waiting-state settlement; existing conversation recovery retains
ownership of a later interrupted settlement. No schema or public API
changes are included.

## Model Used

OpenAI Codex, GPT-6 family. The session does not expose a more specific
backend model ID or fixed context window. Used reasoning, repository
tools, TypeScript and real database test execution.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge
2026-10-31 09:08:20 -05:00
DottaandPaperclip 492d537340 fix(native): recover controllers across webserver replacement (#18343)
## Thinking Path

> - Paperclip manages AI agents and their work.
> - Native execution runs in a remote Runner while the webserver owns
its controller.
> - Encrypted PRP checkpoints and session snapshots already survive a
webserver restart in Postgres.
> - Ordinary warm and per-turn admission still needs local markers and
supervisor metadata to find that state.
> - Replacing the webserver with an empty native controller directory
can therefore lose a usable retained session.
> - This change adds bounded recovery metadata to the existing snapshot
transaction and reconstructs local projections from the selected durable
source.
> - The benefit is native execution continuity across webserver
replacement, with the existing ownership and agent lifecycle policies.

## Linked Issues or Issue Description

**What existing behavior does this improve?**

Native remote controller recovery and retained-session continuation
during a webserver upgrade.

**Subsystem affected**

server/ — native runtime, checkpoint persistence, recovery scheduling
and internal upgrade reporting. Product E2E qualification also changes.

**Current behavior**

Without both the local PRP marker and supervisor file, normal
continuation can return before discovering the saved Postgres
checkpoint. The snapshot already exists in Postgres, but its local reuse
compatibility envelope cannot be reconstructed.

**Proposed behavior**

Select the existing durable source, validate its identity and ownership,
restore its PRP state and supervisor projection, then use normal
authenticated admission. Missing or inconsistent evidence holds
recovery. It does not authorize fresh provider work.

**Reason and benefit**

A replacement webserver must recover active execution and later continue
its retained session without the old server's native files. This is one
component of deployment continuity. HTTP traffic switching, workspace
storage migration and Railway rollout remain separate.

**Breaking changes**

No new public endpoint, schema migration or database pool. The private
run-profile envelope is additive. Disk-independent rollback also
requires a reader for the staged controller format and compact
checkpoint part; the first production release containing these readers
is the floor. Older file-backed sessions need an owner checkpoint or the
bounded internal importer.

**Additional context**

Related foundations: #17401, #17916, #17254, #14621, #14622. The
implementation contract and open acceptance gates are in [the dated
plan](doc/plans/2026-10-30-native-controller-checkpoints.md).

## What Changed

- Persist a versioned recovery envelope, at most 4 KiB, beside the
redacted session snapshot in its existing transaction. Keep it out of
public run projections.
- Compare frozen admission separately from prepared attachment
instructions during staged recovery, preserving exact
template/identity/authority checks.
- Bound the existing lazy checkpoint pool at three connections after
measured two-slot burst backlog; keep request/renewal capacities and SQL
operation counts unchanged. The tuning is a separate commit.
- Discover and restore the exact selected retained source without local
native markers. Preserve the 32-candidate window, progress barriers and
current authority checks.
- Fence snapshot and result writes. Acquire coordinator, issue and run
locks in order and check expiry after lock waits. Combine snapshot
ownership/read work into one statement.
- Reuse existing recovery deadlines and drain/resume scheduling.
Retained-owner waits preserve the original unstarted run and actual
lease deadline. Stop, ownership and provider-progress fences precede
deferral. Add bounded native evidence reporting, retained-source import
and retention protection.
- Admit a settled warm source with an authenticated idle goal-read
suffix while retaining active-work and mixed-authority holds.
- Permit lifecycle `turn.stop` checkpoints after accepted results under
existing ownership fences. Claim the existing successor coordinator
before retiring the old warm session, and stage shared attachments only
after verified retirement. Preserve omitted isolated-home defaults and
existing fresh skill-selection order during recovery without hiding real
configuration changes.
- Carry the exact durable six-field PRP binding during active recovery
after a healthy warm handoff. Keep the Runner mismatch guard and
preserve opaque attachment IDs.
- Preserve an already verified active or idle warm process during remote
preparation; revalidate its proof/liveness and retain later
authenticated PRP attachment. Ordinary resumed leases retain suspension
checks.
- Drain retained source events under their original authority, reconcile
immutable source accounting and block unknown source tool dispatch
before target work.
- Persist compact staged handoff intent through authenticated adoption
and recover direct/listener command-loss windows without another Runner
or duplicate attachment.
- Rebuild suspended lifecycle receipts for resumed prepared tasks, and
retry missing lifecycle reads after partial PRP materialization without
overwriting contradictory evidence.
- Add normal warm/per-turn diskless continuation coverage, real Postgres
races and SQL-cost checks. Add a reproducible paired load workload.
- Give only the explicit outage fixture a 15-minute provider idle
window, with a red/green catalog regression preserving all production
timing and lifecycle policies.
- Publish the goal-less task-session pointer in the existing
post-acceptance terminal checkpoint transaction, with current ownership,
accepted-result, reset and newer-progress fences. Keep a private bound
receipt so late completion cannot duplicate or resurrect publication.
- Use a retained warm sandbox in the dedicated continuity fixture, and
accept an exact output token followed by an explanation. Keep the strict
identity oracle.
- Extend the explicit Daytona cell to a five-minute active outage and
another replacement after completion. Require retained provider
identity, a new tool receipt and a useful follow-up result. Add an owned
loopback Postgres E2E fixture for hosts that cannot start embedded
Postgres.

## Verification

**Merge recommendation — `fc68584ce6231a02e47ecd743f55b036ccea034f`:
ready for the qualified native-controller component.** Full CI, fresh
review, local application paths, controlled performance qualification
and the strict live Linux/Daytona case pass. Independent resource
cleanup is complete. Broader rollout, browser reconnection and the
unexecuted transport/platform combinations remain integration gates.
Integrated 484 passed full local recursive typecheck/build and ordinary
active→completion→cache-loss→C component qualification. Fresh review
then found a valid attached-wake failure: preparation appends attachment
instructions before the verifier compares execution to the frozen
admission. 9f4 fixes that by separately checking the pre-preparation
admission and exact prepared execution. Both hashes are captured
privately per admission; the full template, identity, configuration and
authority checks remain. Its regression fails before the fix; 36 focused
cases, 42 staged source/target cases and server typecheck pass
afterward. The review thread is resolved. Exact-head full CI passes
([run
41168228822](https://github.com/paperclipai/paperclip/actions/runs/41168228822):
48 successful jobs, one intended skip); the complete `pnpm test:run`
partitions are forced, with the five native suites in the Runner lane.
This is not a claim that an unsharded local command passed. The fresh
exact-head Greptile check succeeds with 5/5 and all six threads
resolved.

The original two-connection database comparison closes **steady PASS and
burst FAIL**. Every relative CPU/WAL/request-p99 gate passes and all
operations/ownership remain correct, but candidate arm 3 drains in
1,015.99 ms and baseline arm 4 in 1,059.67 ms against the unchanged
1,000 ms absolute gate. Those results remain failed. A separate 2→3→4→2
diagnostic reproduces drain times 1,051.57 / 956.79 / 882.02 / 1,065.72
ms: three is the smallest tested passing cap, and the repeated two-cap
failure survives run-order/cache effects.

Separately reviewable `fc68584ce6` changes the existing lazy checkpoint
pool default to three connections. Request capacity stays ten and
liveness two; idle release, shutdown fencing, transaction counts and
pool count are unchanged. Thirteen DB lifecycle/cap tests and DB
typecheck pass. Full recursive typecheck/build pass at exact fc68584,
with the matching server build stamp. The final paired native
feature-cost comparison explicitly uses the **same cap-three policy and
common current DB factory in both variants**; its baseline is
controlled, not the unmodified historical cap-two configuration.
Original gates and workload counts remain unchanged. The one strict
Linux/Daytona case started at 04:40:56 UTC only after both new profiles
passed; it passed on the first attempt with all 49 workflow checks.
Independent cleanup confirms all three owned sandboxes absent, owned
Postgres/controllers/observer gone, VM terminated, root volume absent
and ephemeral SSH key/agent removed.

**Final controlled cap-three qualification: PASS.** Baseline native
implementation `59da15066a` and candidate `fc68584ce6` use the same
current DB factory and checkpoint policy (request/liveness/checkpoint =
10/2/3). Eight 65-second ABBA arms cover 300 controllers and 10,000
historical tasks. All correctness, absolute and 10% relative gates pass;
original cap-two failures remain unchanged.

| Mode | DB CPU µs/op, baseline → candidate | WAL B/op, baseline →
candidate | DB-request p99 ms, baseline → candidate | Maximum drain |
| --- | --- | --- | --- | --- |
| Steady | 542.40 → 554.83 (+2.29%) | 1509.01 → 1558.27 (+3.26%) |
107.11 → 111.90 (+4.48%) | 26.35 ms |
| Burst | 1036.36 → 1063.11 (+2.58%) | 4153.12 → 4317.64 (+3.96%) |
103.736 → 103.841 (+0.10%) | 930.14 ms |

Every matched arm preserves operation/statement/transaction counts,
including 3,900 PRP and 3,900 snapshot transactions. All three actual
pools are included; there are zero lost owners, missed lease deadlines,
dropped operations or errors. Peak Postgres CPU is 18.31%/9.47% of two
cores and memory 614.29/684.42 MiB (steady/burst). The benchmark uses
one Node process simulating 300 controllers; it does not qualify
two-webserver overlap, HTTP latency or hosted capacity. Its observer SQL
contributes to measured database CPU. The original unmodified cap-two
baseline is separately retained as failed; this cap-three comparison is
explicitly controlled.

The exact final-source 8/512/8,192-chunk test also passes: zero recovery
SQL, transactions or changed rows in each text-only interval, zero idle
SQL, seven lifecycle transactions and twelve changed rows per sample.
Existing lease traffic remains separate. The final ordinary managed
application replay passes active recovery, completion, native-cache
removal and C continuation; its UNKNOWN local debug-daemon provenance
and partial instruction-observer limits remain recorded. The live case
uses the attested Linux producer instead.


**Live qualification: PASS, one attempt, no retries.** Campaign
`native-controller-retained-fix-fc68584ce6-ec2-20261031T044055Z` started
04:40:56 UTC on the exact final Linux webserver source; suite definition
hash `12f9bb97823c1537e43f0398e7cddf39890f77bce7b413ca4dfd944f4a30e5d5`.
The existing immutable image and attested Bookworm Runner artifact are
unchanged.

- A was SIGKILLed and its native cache discarded. B started after
300,149 ms, naturally acquired generation 2, authenticated at 316,624 ms
and resumed at 317,682 ms within the original 420,000 ms grace. The same
active run, Runner, provider PID/start fingerprint and one
submitted/started/accepted turn were preserved; one final
result/terminal and workspace finalization completed, with no
retry/recovery action.
- After active and queued completion, B was SIGKILLed and its native
cache discarded again. C received exactly one ordinary task-comment API
follow-up, completed a new tool and produced a useful reply while
preserving native/provider/Runner identities. This closes the earlier
failed post-C gate. A separate C OS-process PID field was not exported;
the physical-PID proof is specifically A→B.
- Four distinct results were accepted and published; all four
finalizations committed at attempt 1, all four accounting-v2 projections
settled, and the task-session pointer advanced to C. The coordinator
independently checked these facts and all 49 canonical checks against
the sanitized receipts.
- Canonical cleanup passed and independent checks confirmed three exact
sandbox 404s plus complete inventory/zero owned remnants, no owned PG or
controller/observer processes, EC2 terminated, root volume absent, and
the ephemeral SSH key/agent removed by 04:54:25 UTC.

Live scope is classic remote Codex warm continuity with non-native
storage dependencies available. Prepared-task completed B→C, full
per-turn application disk loss, browser reconnection, two-server load
and overall Railway/HTTP continuity were not live-qualified here.
Earlier failed campaigns and the original cap-two burst failure remain
failed historical evidence. A report-renderer cache setup failure was
preserved; the normal sanitizer subsequently succeeded with an explicit
cache path and a new output directory, without changing validators.


The repair keeps retained events under their original six-field
authority until persistence and accounting accept them. Unknown semantic
effects stay unresolved. A compact staged target survives source
bootstrap, cached-command delivery and authenticated handoff, including
an uncertain commit response. Direct and same-guest-listener recovery
require the verified original Runner and the exact endpoint. Target
snapshot publication marks readiness in memory, with retirement
coalesced into an existing command write. Headers contain only the
staged descriptor/digest; a prequeue template is written once as a
changed checkpoint part and then recovered from the existing
command/receipt. No second session snapshot transaction, streaming SQL
path, new pool or recurring idle scan is added.

| Current repair gate | Evidence and scope |
| --- | --- |
| Source-tail regression | Real Runner protocol RED reproduced
attachment rejection. Frozen core/transport pass five source-tail cases:
source usage attribution, held persistence/no premature ACK, lost commit
response plus cache loss, unknown semantic hold and accounting rejection
hold. |
| Handoff loss windows | Direct and listener modes pass
queued/prepared/activated/completed boundaries (eight cells), preserving
the actual Runner/provider process. Missing adoption proof and changed
endpoints reject recovery. |
| Compact storage | A 31 KiB attachment grant writes its separate part
once, leaves it unchanged across source snapshots and removes it at
queueing. Headers do not duplicate the grant. |
| Accounting | 21 real-Postgres usage tests and 19 source-binding tests
pass. Recovery hydrates immutable source receipts without resetting
their producer or billing classification; conflicting/incomplete usage
holds. |
| Admission and malformed evidence | Driver 16, staged evidence 42,
restart classifier 27 and source usage 19 focused cases pass. Four
malformed-file regressions pass at d6a7, whose executor is
byte-identical at 484, and server typecheck passes. Full executor file:
990 pass; 16 embedded-Postgres `initdb` setup failures before
assertions, retained separately. |
| Required checks | Exact fc68584 recursive typecheck and build pass
locally, with matching server stamp. Forced full CI succeeds (48 jobs
pass, one intended skip); all PR checks are clean. Maps/token gates pass
for their unchanged source surfaces. Fresh exact-head Greptile is 5/5,
all six threads resolved. |
| Ordinary application path | Exact fc68584 managed component passes
active recovery after natural expiry, completion, native-cache loss and
ordinary C continuation. Production bytes match before/after; temporary
fixtures restored and owned DB/services cleaned. UNKNOWN local
debug-daemon/partial instruction-observer limits remain; the separate
live case uses the attested Linux producer. |
| Producer | Locked Bookworm build from exact 5b7 Rust tree
d03e494217, equal to final fc68584 Rust
source. SHA-256
65b8f8cfdd6099e9ad24f1ca154e8a260777269cc82f6e23c6e6a180c531eaaf;
38,515,328 bytes. Actual Debian 12 execution and live admission pass.
Controller/admission/DB changes do not relabel the producer source. |
| Historical cap-two comparison | Exact 59da baseline vs 5b7 candidate,
300 controllers/10,000 history, ABBA 4×65 s per mode, all three actual
pools and real snapshots. Steady CPU/op 541.36→554.64 µs (+2.45%);
WAL/op 1512.13→1560.99 B (+3.23%); DB-request p99 102.78→105.99 ms
(+3.12%): PASS. Burst CPU/op +4.71%, WAL/op +5.29%, p99 −0.10% pass
relative gates, but absolute drains above fail. Identical operation/SQL
counts, zero lost leases/drops/errors. One Node process simulates 300
controllers; this does not qualify two-webserver overlap or HTTP
capacity. |
| Live acceptance | Strict final-source Linux classic Codex case passes
1/1 on attempt 1, all 49 checks. Active recovery within grace and useful
retained C continuation succeed; four
accepted/published/committed/settled outcomes. Independent provider,
PG/process, VM/root and SSH cleanup complete. Prepared/task and broader
rollout limits are explicit above. |

**Historical qualification snapshot through `9eb9ac6`.** The head at
this snapshot was `9eb9ac6f9e312f3ebe8040f5a7565e88ae8824f3`. Server and
Runner package sources are byte-identical to `283e05ffaa`; the two later
commits change the explicitly scoped qualification and its documentation
only. It includes master through the storage-owner fix
`45a3a92e6dc52d20923b9aa34a22fee2ec5443f9` (#18357). At that snapshot,
CI/review passed but the strict post-C native recovery gate failed; the
PR stayed draft and required another native repair. Prior `39a4343` CI
and review passed, but its full live workflow failed; that grade remains
unchanged. The first repaired `435ccd2` live attempt failed before any
injected outage. It exposed a legitimate terminal snapshot before result
acceptance; no accepted result ID or publication receipt was observed.
Its canonical report remains 0/1 `candidate_failure`, with cleanup
passed and independent provider absence confirmed. `0862062` defers
publication until result acceptance and fixes the fresh review's
coordinator/issue lock-order finding. Both failures have deterministic
real-Postgres regressions. The `0862062` live attempt then proved
accepted-result publication but failed active recovery: a resumed-lease
preparation guard demanded suspension after the exact live Runner was
already verified for adoption. `64c0b746` preserves that verified
active/idle-warm process, revalidates its proof/liveness, and keeps
ordinary suspension checks and later PRP authentication. Its live run
passed preparation but exposed a second active-warm boundary: all
durable binding fields matched except opaque turn/item attachment IDs,
which the server had regenerated. `7a203274` carries the complete
verified six-field binding and keeps the strict Runner mismatch guard.
Its cloud case then passed active adoption, completion, publication and
accounting. The queued continuation exposed accepted-result retirement
writes and an implicit-home fingerprint drift; both are fixed with
deterministic regressions in `39a4343` before this fresh full
qualification.

The prior live case exposed a real publication gap. A goal-less native
turn could persist its accepted result and terminal snapshot before
provider cleanup, while the task-session pointer was still empty. Normal
later admission then selected a fresh session. The fix publishes that
pointer and a private bound receipt in the **existing post-acceptance
terminal checkpoint transaction**, before cleanup. Earlier terminal
observations persist without a handled receipt or continuation pointer.
No result-acceptance or snapshot transaction was added. The late
completion path recognizes the receipt. This also prevents a late
callback from restoring a pointer after a user reset. Goal/control
publication keeps its existing owner.

The dedicated Daytona fixture now uses the existing warm/reusable
environment. Its sandbox, Runner and provider storage must survive. The
former generic per-turn fixture disposed the sandbox after completion
and kept provider-history backup bytes under the discarded directory.
Whole per-turn disk-loss acceptance therefore has a separate
provider-backup storage dependency. It remains distinct from the passing
native per-turn component checks with backup storage available. The
60-second lease, 300-second outage and 420-second grace are unchanged.

| Gate | Current repair evidence |
| --- | --- |
| Assembled regression | Baseline fails with an accepted result and
terminal snapshot but a NULL task pointer while real provider cleanup is
held. The fix passes normal continuation and reset cases, with no
pointer seeding. Exact merged `92b7447` passed 2/2 twice, including
after normal package TypeScript output refresh. Production files are
byte-identical at frozen `435ccd2`. |
| Persistence and concurrency | 19 helper/transaction cases and all 59
existing control-port cases pass on `0862062`. They cover bound result
IDs, reset/newer epochs, Stop, lock waits and expiry, receipt replay,
missing stubs, foreign bindings and atomic 4 KiB rollback. Existing
snapshot transaction count stays one. The new tests reproduce the exact
live missing-result-ID error and the inverse replay/status lock order
against `435ccd2`, then pass after the correction. Replayed results
still reject stale generations. |
| Completion | All 32 completion-boundary tests pass on merged
`92b7447`; the source is unchanged at `435ccd2`. Native result-shaped
session metadata is preserved. |
| Qualification fixture | A valid review report reproduced three
rejected correct replies. Exact token-boundary matching fixes them. 140
focused E2E/catalog cases and Product E2E typecheck pass. Wrong tokens,
marker prefixes/suffixes and wrong authors remain rejected;
retained-identity checks are unchanged. |
| Required checks | Full recursive typecheck and standard build passed
at `435ccd2`. Both exact commands also passed on `0862062`, with its
exact server build stamp; both also pass on `7a203274`, with its exact
server build stamp. Fresh `0862062` Greptile passed 5/5, with zero
unresolved threads. The `64c0b746` normal CI then passed all 49 jobs (48
success, one expected skip) and Greptile passed 5/5 with zero unresolved
findings. The `7a203274` normal CI also passed 48 jobs with one expected
skip, with fresh Greptile 5/5 and zero unresolved findings. Current
`39a4343` recursive typecheck and standard build both pass with
persisted exit codes and its exact build stamp; fresh Greptile is 5/5
with zero unresolved findings. Its normal CI completed successfully: 48
jobs passed and one expected job skipped. The fresh live result remains
separately failed. The `0862062` normal CI had 46 passing jobs, one
expected skip, one worker communication failure and its aggregate
failure; GitHub states the self-hosted runner lost communication. No
failed assertion or specific OOM/spot cause was established, and no
blind retry was used. |
| PostgreSQL supplement | One corrected all-pool pair at the preceding
repair passed 300-controller/10,000-history correctness and absolute
gates. SQL 76,590→75,990; transactions 9,013→8,713; UPDATE rows 11,613
each; 300 correct pointer writes each. PG CPU 31.99→30.46 s, WAL
70.36→67.87 MB, request p99 100.98→103.12 ms. This is one pair, not a
repeated improvement claim or an exact `0862062` CPU measurement. Its
two later changes defer premature publication and reorder existing
locks; they add no transaction, stream/idle writer, pool or timer. The
first collapsed-pool attempt remains invalid and retained. This is not
an exact final-head CPU/WAL measurement; later fixes change ordering,
identity selection and in-memory skill replacement without adding
snapshot transactions, pools, stream writes or idle SQL. |
| Live publication proof (`0862062`) | Baseline run
`06fcc806-f186-4190-9b57-087b61d75533` accepted result
`58f912dc-94d9-4b4d-bd3d-d5f689c83fd3`; the publication receipt names
the same result, the task pointer has parameters and `lastRunId`
matches, and the normalized native identity matches the following active
run. Accounting v2 settled. |
| Active recovery (`0862062`) | **FAIL.** SIGKILL/cache discard at
23:07:28.666 UTC; hold 300,000.859 ms; B ready at 308,896.486 ms;
natural generation-2 ownership at 312,906 ms. At about 319 s,
preparation failed `runner_harness_state_mismatch:
resumed_not_suspended`. No authenticated after-receipt passed within 420
s. Exact original Runner PID 668/start/fingerprint was independently
still alive; provider auto-stop was 15 minutes. No retained C follow-up
qualified. Canonical 0/1 `cleanup_failure`/cleanup-failed report remains
failed; subsequent independent cleanup deleted all three owned resources
with exact 404s and confirmed full intended-account inventory with zero
owned resources. |
| Verified adoption preparation (`64c0b746`) | 91 focused cases pass,
including actual preparation for four active providers and a distinct
prior/current warm proof. Unproved resumed state, dead process and stale
warm owner remain rejected. The earlier options-only fixture missed this
gate. No spawn, backup restore or PRP-authentication bypass was added.
Server typecheck passes. |
| Active warm identity (`64c0b746`) | **FAIL.** B claimed generation 2
at 312,995 ms. Preparation passed, then strict PRP recovery rejected the
generated attachment IDs at about 319 s. The saved and desired Runner,
lease, normalized session and run IDs matched; only
`turn_attachment_…`/`item_attachment_…` differed from generated
`turn-<run>`/`item-<run>`. Canonical 0/1 cleanup-failed report remains
failed; independent cleanup confirmed deletion/404s and zero owned
provider resources. |
| Six-field identity repair (`7a203274`) | Actual server-factory
regression RED4→GREEN38. A real Rust Runner test passes healthy first
run → random-ID warm handoff → held active second run → restored
controller. It verifies a new live authenticated connection, exact
identity, same Runner/provider OS identities, no duplicate launch/turn,
and no redispatch or invented receipt for an uncertain tool. The
synthetic wrong pair still fails the unchanged guard. This protocol case
does not claim business completion. Server and Runner typechecks pass. |
| Active recovery/completion (`7a203274`) | **PASS for the active
component.** Full five-minute SIGKILL/cache-loss hold. B ready at
308,936.651 ms; natural generation 2 observed 312,979 ms; authenticated
at 317,720 ms and resumed processing at 318,527 ms. Same run
`1e1ccb00-0728-4935-97da-57562d81cb42`, Runner
`246f73f7-a689-4177-a9c2-7ce711d63aed`, remote PID 669/start
23:48:27.470, provider lease/session and one submitted turn. Accepted
result `49097529-5310-4ac3-af95-5bf9b91d19f4`, publication, finalization
and accounting v2 all settled. |
| Full workflow (`7a203274`) | **FAIL, preserved.** Queued
late-requirement run `5e61f38d-c7d1-4fc1-bcbf-bce9d46ce4eb` failed
`runner did not durably suspend before checkpoint` before outage 2.
Canonical 0/1 candidate failure, cleanup passed, evidence valid. C
retention was not exercised. Independent provider absence,
controllers/PG cleanup, EC2 termination and root-volume absence all
confirmed; closed receipt SHA-256
`676a3b15eb9937b6bf995c36fb8666c88964d509e5ceb9109fb02da0aa2bc909`. |
| Retirement and stable configuration (`39a4343`) | Real Runner +
Postgres RED reproduced the exact suspension failure and nine owner
rejections. `turn.stop` is now lifecycle checkpoint maintenance under
unchanged owner/result/generation fences. GREEN25/25 proves actual
persisted suspension, exact identity and completed stop/drain/suspend;
unaccepted, foreign, stale and new-work negatives remain rejected. Two
default-home fingerprint REDs become GREEN9/9; explicit mode changes
still invalidate. No global matching exemption or historical fingerprint
rewrite. |
| Fresh full Daytona warm cell (`39a4343`) | **FAIL, preserved.**
Launched 00:15:29 UTC with automatic retries disabled. Active adoption
passed: actual offline hold 300,000.848 ms; B ready 309,922.155 ms;
natural generation 2 at 311,821 ms; authenticated 317,989 ms; resumed
330,440 ms. Same run `3e126819-e786-4b3b-b923-c975cf4f5b79`, Runner
`4079138a-8d7c-44a4-8558-07a5411d1f55`, PID 668/start and
provider/session identities. Accepted result
`08e504af-4dec-48a8-bf05-bf0a32280559` and publication passed. Queued
run `31d168c9-7ab9-4700-abb6-fafb90912237` failed the same strict
suspension error before outage 2. Its row selected a new native
identity, but no new third provider process or invocation was observed.
Recovery-time configuration still reset only `adapterConfig`; native
provider, context and workspace subtrees were unchanged. Canonical 0/1
candidate failure, evidence valid, normal cleanup passed; all campaign
provider/PG/process resources independently absent. Closed campaign
receipt SHA-256
`5e7d6281c13c812f3a946667f97f3c7d339b5ad86a3a819bd185b2fa73bc4a19`;
EC2/SSH remain temporarily held for the concrete follow-up repair.
Original 60/300/420-second limits and strict queued/second-replacement
checks remain unchanged. Direct-process path; no new live prepared-task
claim. |
| Native retirement authority (`283e05ffaa`) | Exact `39a4343` facade
regression RED3→GREEN9. The successor now uses its existing production
coordinator claim and prompt renewal before strict retirement. A real
Runner/Postgres case starts in the actual native-observed/unclaimed
phase, claims through production code, then closes and durably suspends
the predecessor in 1.657 s. All 25 real-Postgres cases pass;
unclaimed/foreign writers remain rejected. Shared attachment staging
stays after retirement; Stop and denied claims neither close nor stage.
No new claim or SQL path was added. |
| Configuration continuity (`283e05ffaa`) | Real shared/project-primary
environment selection → configuration with four skill versions
reproduces `reset: true`, changed category exactly `adapterConfig`,
after a Postgres JSONB read. Pinned restoration had reordered the
generated preference while actual runtime skills stayed identical.
Replacing existing pinned rows in place preserves the original fresh
name/key order and fingerprint. The assembled regression passes, as do
three existing pinned-version/rename/alias cases and server typecheck.
Genuine model/skill-selection changes still invalidate. No
fingerprint-format change or broad compatibility exemption. |
| Final production repair (`283e05ffaa`) | Full recursive
typecheck/build and [normal
CI](https://github.com/paperclipai/paperclip/actions/runs/41151145106)
PASS: 48 jobs plus one expected skip. Fresh review 5/5, zero unresolved
threads. Live baseline, recovered run and queued continuation all
succeeded, each accepted/published/committed once with accounting v2
settled. Their native/provider identities and configuration fingerprint
match; both recovery and continuation report no reset, no changed
categories and task-session reuse. Active outage/authentication remains
within original timing. |
| Browser-dependent continuation (`283e05ffaa`, definition 6) | **Whole
cell FAIL, preserved.** After B was killed at 00:46:38.928 and its cache
discarded, C became ready in 9,151.410 ms. `openParent()` then hit a
30-second `page.goto`/DOMContentLoaded timeout before posting the final
request. No fourth native run or C continuation was exercised. Cause of
navigation timeout is unknown. C task had no execution lock, queued
comments, handoff or recovery blocker; all three prior runs were
committed/accounted. Normal cleanup passed; independent provider
absence, controller/PG cleanup, EC2 termination and exact root-volume
absence confirmed. Sanitized report bundle SHA-256
`2a3b841d62efb2ae30ef14f96a431ac4fa7fe3a782f1144831512f78edc65022`. |
| Native API continuation qualification (`9eb9ac6f9e`, definition 7) |
**FAIL, preserved.** The real post-C API request dispatched run
`c71fbb18-f979-4fe4-93ce-9c4be46dbf21`, which failed
`native_session_interrupted` / `native_session_recovery_failed` at
01:10:00.640 UTC. It selected the same normalized native identity,
Runner and checkpoint-provider identity as the three succeeded turns. No
C result was accepted; pending accounting remains explicit. Active
recovery passed: actual offline hold 300,001.098 ms, B ready 308,335.019
ms, natural generation 2 observed 311,818 ms, authenticated 315,540 ms,
resumed 316,612 ms. Queued continuation succeeded/accepted/published. B
was then killed/cache discarded at 01:09:34.500 and C ready in 8,783.803
ms. Original classifier `transient_infrastructure`, whole-case failure
and cleanup passed are unchanged; that classifier does not establish the
root cause. All owned provider/PG/process resources, EC2, root volume
and SSH agent independently absent. Closed receipt SHA-256
`7f21ac4a22efc07b849fa7e17866083b6127b3321af12671b4fc054ce57039a9`;
sanitized bundle
`71ffef14a30a553e008320a31840a6d6c0de85c1bfdb60f783fdb53a6aae812a`.
Exact backend detail is unavailable in approved structured evidence. |
| Current required checks (`9eb9ac6f9e`) | Recursive typecheck, standard
build and exact build stamp PASS. [Normal
CI](https://github.com/paperclipai/paperclip/actions/runs/41152908417)
PASS: 48 jobs plus one expected skip. Fresh Greptile 5/5, latest edited
summary checked, zero unresolved threads. Exact8/512/8,192 stream probes
again report zero recovery SQL/transactions/rows and settled-idle SQL;
seven control transactions/twelve changed rows each, with 36 separate
legitimate renewals in the longest case. CI success does not supersede
the failed live C gate. |

The completion supplement observed secondary request/liveness/checkpoint
transaction p99 increases of 23.0%/45.7%/15.6% in its single pair.
Renewal p99 stayed below 0.865 s, with 900 successful renewals per arm
and no lost leases. The named pool caps stayed 10+2+2. An aggregate
activity sample peaked at 15 non-observer entries without backend-type
classification, so no claim is made that all were client connections. No
sampled lock episodes does not establish zero lock waits.

Twelve pure reader/selector cases also pass with the new adjacent
receipt. This is not another executed process rollback. Development
reader `5cf7aead` can parse the recovery state, but its old run-detail
redactor can expose receipt IDs/outcome to an authorized run reader. The
first production release containing recovery readers, complete
attachment-identity handling and both private-field redactions is the
rollback floor. The implicit-home fix prevents new recovery-time
fingerprint drift; it does not rewrite previously stored fingerprints
from failed candidates. The development probe is not a published
supported rollback target.

Latest actual `0862062` Runner tests independently passed 8/512/8,192
text chunks with zero recovery SQL, transactions and changed rows, plus
zero settled-idle SQL. All three observed seven setup/control
transactions and twelve changed rows. The 8,192-chunk case separately
recorded 31 legitimate lease-renewal statements, with no lost lease.
These are component SQL observations, not a production CPU/WAL claim.
The new adoption and identity branches affect recovery preparation only.
The `64c0b746`, `7a203274` and exact `39a4343` CI independently passed
all three stream sizes with the same zero-SQL/idle result; each latest
8,192-chunk case recorded 36 separate renewal statements. Exact
`39a4343` Runner 2/2 passed 133 files / 2,317 tests plus two skips; its
separate native group passed 150 tests plus eight skips.

The first API fixture revision omitted the mandatory final screenshot;
this was caught before paid launch and allocated no provider/model work.
The correction captures the actual retained Chromium page with an
explicit unqualified-browser label, without changing the standard report
validator.

Automatic approval review rejected exporting raw private API/workflow
snapshots because of sensitive payloads and insufficient
destination-specific authorization. Sanitized reports and
bound/hash-only receipts are retained; raw snapshots were not copied
through another channel. This does not change the failed grade.

Repair characterization also preserves its failed attempts. An
unconditional staging relocation broke three existing same-scope
scripted cases; the final implementation defers staging only for an
actual superseded warm scope, and all nine order/race cases pass. One
baseline transform overlapped an edit and is explicitly invalid; the
actual immutable `39a4343` loader then produced the three genuine REDs.
The independent task-directory hypothesis produced a RED but was
excluded by the live shared-workspace evidence; no directory policy
change was landed. A shared-workspace fixture authorization omission was
corrected separately from the four-skill semantic RED.

Setup failures are retained separately from semantic outcomes. These
include an old host port after the owned Postgres fixture restarted and
a sandbox-denied TSX IPC pipe. The supported external-Postgres run
passed, and the final exact recursive typecheck passes with normal
process permissions. Seven stale declaration errors after the master
merge cleared after compiling the actual merged SDK/Runner TypeScript
sources. No declarations were edited by hand.

<details>
<summary>Earlier qualification measurements and failed attempts
(historical, before this repair)</summary>

**Historical blocked gate (before the repair below).** Final native
implementation is `abed921e12d543b62f57a56435419c0dafb0bc33`; current
branch head is `af9e2d157dcc349e55374ad186c9be2d6cb96bf9`. The two later
commits change only qualification fixtures, their matcher and
documentation; `server/` and `packages/` are unchanged. It includes
master through `fd008979f5794fda3d5f54151d36acd31d0de140`.

The live Daytona measurement proves five-minute active recovery,
once-only completion and accounting, but **fails retained-session
identity after the second replacement**. The saved checkpoint and
recovery metadata exist. The task-session pointer remains empty, and
ordinary admission creates new native/provider sessions. The exact
skipped publication boundary remains unproven. A useful saved-file
result alone does not satisfy retained-session continuation. This
application-path gap blocks merge independently of CI.

A separate new-master CI failure is owned by the storage workstream (fix
in #18357). No storage guard, session-identity oracle, lease/grace limit
or provider result was relaxed.

| Gate | Observed result and exact scope |
| --- | --- |
| Distinct source recovery and compatible rollback | PASS at A
`5cf7aead09a2d9c7e2f2929d761f535ef3c1d798` → B
`5ea45f8d17e33c9a62bd79982dcf0375b07733d0` → fresh B → A. Four
controller processes, natural 60-second lease expiry, absent native
projections before replacements, three succeeded/committed unique
results, one provider thread, unchanged Runner identity, and strict idle
cleanup. 177.782 seconds. |
| Immutable installed native component | PASS at installed A
`5cf7aead09a2d9c7e2f2929d761f535ef3c1d798` → installed B
`eaef0d56552c087aaa4fa68a8655282ffbd12667` → fresh B → A. Each
controller imports its contained compiled server and DB. Three unique
committed results, stable Runner/thread, no extra provider restart on
same-contract rollback, strict cleanup. 106.672 seconds. This is
compiled component proof, separate from full CLI-native application
acceptance. |
| Normal public CLI startup | PASS for B
`eaef0d56552c087aaa4fa68a8655282ffbd12667`, Node 24.22.1, darwin-arm64:
fresh external DB, 415 migrations, health ready, root HTML 200, company
POST 201 plus GET readback. The installed tree remained unchanged after
execution. |
| Five-minute component outage | Actual controller absence 300,168 ms.
Natural generation-2 claim at 407.196 seconds after crash, same provider
attempt and Runner, original run succeeded/committed. The larger
540-second case timed out before its retained follow-ups, so it is an
active-adoption pass, not a complete four-controller pass. The complete
short source/installed cases above independently cover follow-up and
rollback. |
| Drain/resume review regression | Fixed in
`226f03e736d1ee99fea1762ab32ea3a8a9241c20`. Five facade-level cases
pass: overdue normal/restart waits, future timer cancellation, another
facade resuming the original owner, and transient retry. Against exact
prior scheduler `5ea45f8d17e33c9a62bd79982dcf0375b07733d0`, four fail
and one passes. The later head changes documentation only. |
| Final corrected-fixture Daytona | **PARTIAL: active recovery PASS;
retained identity FAIL**, exact live source `0b6afc499f`. A was
SIGKILLed and native cache discarded; actual offline hold 300,000.375
ms. B was ready at 308,326.961 ms, naturally claimed generation 2 at
312,059 ms, authenticated at 315,996 ms and resumed processing at
316,519 ms, within the original 420-second boundary. The same run,
Runner PID/start, session, lease and event prefix survived; one turn
submitted. Original execution succeeded and settled accounting. After
completion, B was killed and its native cache discarded; C was ready in
9,077.779 ms. C executed the saved project and returned correct
`queue_r`, with all four runs succeeded/accounted. However, native and
true provider-session identities changed: the unchanged retained oracle
fails. No whole-workflow pass is claimed. |
| Prior matched-producer Daytona | FAILED at exact `abed921e12`. The
matching current-source Runner passed normal admission, completed the
first task and settled its accounting. During the active revision, A was
SIGKILLed and its native cache discarded. Actual offline hold was
300,000.727 ms; B was ready at 308,304 ms and naturally claimed
generation 2 at 309,651 ms. At about 318 seconds, the remote process
check reported `process_not_running` for the original admitted Runner.
No authenticated after-receipt or retained follow-up passed. The current
failure is preserved; no automatic retry, lease/grace relaxation, debt
edit or provider replay is used. Bounded forensic read found preserved
exact-bound state with no recoverable failure, a transport-reset
diagnostic and no terminal delivery; this supports external process loss
without proving the exact cause. The sandbox had a five-minute auto-stop
policy, conflicting with the required surviving-sandbox assumption.
Owned cleanup precedes the separate corrected-fixture case. |

**Live retained-session boundary.** Prior completed run `3806…` and C
follow-up `8adf1df3-6744-40bf-b35d-100451f29d9f` both have database
session snapshots and `nativeControllerRecovery`. Their tool
fingerprint, provider configuration, workspace descriptor,
runtime-context digest, driver and work mode match. There is no recorded
force-fresh/workspace-selection change, and this is an ordinary task
rather than a conversation-generation reset. The same issue/agent
task-session row has `session_params_json: null` and `last_run_id: null`
from baseline time. Both native normalized UUID and actual provider
session/thread hashes differ after C. Full application admission
therefore did not select the retained source. No fallback to file
execution or relaxed identity comparison is accepted as proof of
continuity.

**Independent cleanup completed.** Full current-account provider
inventory confirms no resources owned by either final fixture, with
exact-ID absence checks. Owned controllers and campaign Postgres are
stopped/removed. EC2 `i-01551c09af098dde5` is terminated, its
delete-on-termination root volume returned `InvalidVolume.NotFound` at
22:14:08 UTC, and the temporary SSH key/agent were removed. The
canonical failed report and immutable oracle input are retained. Closed
qualification receipt SHA-256:
`b4b5fefce287ebfdbf2cc2238efaad62d8ad485aed0e9c0628ae95dbc18a8575`.

**Original measurement and grader repair remain separate.** The C reply
contains the requested marker followed by a newline and the correct
output. The old workflow waited for one literal space, so its normal
receipt collection stalled; that original attempt was closed and its
canonical `cleanup_failure`/interrupted result is preserved. Commit
`af9e2d157d` repairs only this reply predicate, with 144 focused cases,
E2E typecheck, discovery and diff checks passing. Ordinary string
matching stays literal. The corrected predicate accepts the saved reply,
but the unchanged retained-identity oracle still fails. Pure
active-recovery grading of the captured measurement passes 7/7; this is
not a rewritten passing campaign.

The sandbox idle-window conflict was corrected only for this explicit
fixture (15 minutes). Actual baseline and later sandbox metadata confirm
that policy; the original active box was disposed before a post-gate
policy read, so its 15-minute setting is established by the normal
create/environment configuration rather than an after-read of that box.
Production native lifecycle and the 60/300/420-second constants remain
unchanged.

The development compatibility reader A is a genuine backport commit
based on `59ff89a18fe1312b5f0bb908439bbdb1237b0252`, with the required
idle-goal reader fixes. It is not a previously published release. Its
older executor differs from B. The rollback floor must include this
reader capability. The source component cases admitted the Linux ARM64
Runner packaged at `59ff89a18fe1312b5f0bb908439bbdb1237b0252`; the
installed component case admitted the `5cf7aead` package. Their Runner
bytes are identical: SHA-256
`b1f04caa1ce04e720dec7eb62ede170eb3621948c0849b8f305ea5c5116bced8`. Each
admitted artifact remained unchanged throughout its case.

[Final public package
build](https://github.com/paperclipai/paperclip/actions/runs/41121460635)
and [reader-floor
build](https://github.com/paperclipai/paperclip/actions/runs/41122170506)
both passed all four daemon builds, package assembly and both Darwin
clean consumers. Both Linux ARM consumers failed before provider work
with the same existing local Codex permission-profile error: bubblewrap
attempts `activity.fifo/.git` and reports “Not a directory.” This
matched baseline failure remains open; it is not a native remote
continuity pass. Full post-run tree and build-stamp revalidation also
passed after the compiled native case. The installed component trees are
A `c29114c1bf71c5af00f761aeb9e3d84ed3d3075b9f5600dee3ef2543eb2b6ec5` and
B `eda575505373a3bdc630fa4919862b359791fe3a7ef637961a25b73b38efe4b0`.

**Controlled PostgreSQL qualification passed.**
Baseline/candidate/candidate/baseline workloads used 300 controllers,
10,000 historical tasks, real snapshot/encrypted PRP writes and
unchanged pools. PostgreSQL and client were each limited to two CPUs and
1536 MiB on an isolated eight-vCPU Linux host.

| Workload | PG CPU per operation | WAL per operation | Database request
p99 |
| --- | ---: | ---: | ---: |
| Steady | +1.18% | +1.81% | +1.91% |
| Aligned burst | +3.40% | +2.56% | +3.81% |
| Two logical servers | +3.11% | +2.56% | +9.68% |

All arms passed absolute/correctness gates with unchanged control
transaction counts, no dropped operations and no owner loss. Overlap p99
has little margin below the relative threshold. It uses two clients in
one Node process, not two HTTP servers. [Closed measurements and
limitations](doc/plans/2026-10-30-native-controller-qualification-evidence.json)
and exact-source reproduction patches are retained. [Earlier
contended-host
failures](doc/plans/2026-10-30-native-controller-load-evidence.json)
remain unchanged. The production DB-claim probe claimed 300 owners in
2.84 seconds and restored/committed controls and snapshots in 8.74
seconds, with zero owner loss or settled-idle SQL; its provider
references were synthetic. The measured checkpoint/snapshot/renewal
paths retain the same persistence behavior after integration; later
accounting and business writes have separate owners.

Actual Runner stream tests at `da8c7f6e1837ddd896dfe83a7524812fee813487`
passed 8/512/8,192 chunks: zero recovery SQL, transactions and changed
rows during text intervals; zero settled-idle SQL. Each retained seven
control transactions and twelve changed records. Existing renewal SQL
was measured separately. The guard/scheduler fixes add no stream path,
pool or recurring idle scan.

The live fixture used current-source producer SHA-256
`f0000c90cb83880191479da639201e659aa6ce0fc7d67c859faa172ec977849e`, a
normal locked exact-head build with pinned Rust 1.97.1 in Bookworm.
Actual network-isolated, read-only ABI execution passed (GLIBC
requirement 2.34 against runtime 2.36). The immutable base image
remained
`ghcr.io/paperclipai/paperclip-daytona-runner@sha256:36069788f53c51f228764fa36180575443dfb5d1f84a342d7c0daceb28dc61cc`,
source `a0ef3ce7`. This was an unpublished development producer,
explicitly distinct from the base image and admitted before the fresh
fixture began. The earlier host build failed ABI preflight before
admission. The preceding old-producer fixture completed its initial task
but lacked the usage-basis marker required by current master; it
remained pending/unpriced and correctly paused. It was independently
cleaned without debt or budget changes. Two preceding local Linux setup
attempts OOM-killed before provider allocation, and their cleanup
passed. These attempts remain separate from the final recovery failure.

**Failures retained and resolved separately.** The earlier `98f05fc`
probe rejected a valid settled PRP v2 goal suffix; `eaef0d5` fixed that
reader and the fresh follow-up passed. Later component cleanup failures
were traced by a scoped exception observer to the fixture adapter
rejecting directory downloads. A bounded owned-directory transfer with
exact-byte/mode preflight corrected the fixture; source and installed
strict-cleanup cases then passed. No production guard was relaxed. The
initial local integrated control-port run hit its 30-second embedded
Postgres startup hook before executing 59 cases; 18 other focused cases
passed. A bounded rerun used a fresh owned external Postgres fixture,
applied normal migrations before Vitest, and passed all 59 cases with
the original timeouts unchanged. Its container and data were removed;
the failed attempt remains retained.

The additional opt-in full Product E2E Vitest run is not green: 5,313
passed, seven failed and three skipped. An actual `abed921e12` archive
with the same dependencies, Node and IPC permissions reproduces all
seven failures with the same reasons. Five are unchanged
workflow-policy/profile-pin assertions, including Pi profile version 37
versus the test pin 35. Two database suites failed during embedded
Postgres startup before their assertions; semaphore exhaustion is
confirmed in the observer log. The observer passes its supported
external-Postgres rerun with original timeouts and source unchanged. The
controller-database client-kill/postmaster assertions remain unexecuted
after `initdb` bootstrap failure; no external override is supported. The
unit launcher stopped before its Node-test phase, which was then run
independently and passed 181/181. The original failed full run is
preserved. These results remain distinct from the passing focused checks
and normal repository CI. The first local Product E2E typecheck also
encountered stale compiled Runner declarations; a genuine package-local
TypeScript compile refreshed them and the unchanged check passed,
without a dependency install or producer rebuild.

Earlier [Daytona campaign
41108162900](https://github.com/paperclipai/paperclip/actions/runs/41108162900)
failed at sandbox creation before any agent, with the underlying
provider error unavailable. Its [sanitized
report](https://d1p6rlowie26tp.cloudfront.net/runner-e2e/campaigns/gha-41108162900-2/index.html)
remains a `cleanup_failure`. Both old creation names are absent in the
current authenticated account, but the old CI account identity was not
retained, so account equivalence is unproven. The subsequent exact
`eaef0d5` source Product E2E attempt passed image/agent setup and the
initial project, then held the controller offline for 300,003.7 ms. Its
Mac supervisor failed owned-process inspection before B readiness; no
adoption passed. Full current-company lease/label checks, provider
deletion, exact-ID 404s and complete inventory confirmed cleanup of that
attempt. Its local server and owned Postgres stopped. The prior AWS
campaigns and database qualification VM were terminated with root
volumes removed.

The old admitted test Runner lacks the newer usage-basis marker
introduced on master. The integrated component B turns retained
unpriced, incomplete accounting obligations with `costAccountingPending:
true` and no settled charge. The compatibility-reader A turn used its
legacy receipt interpretation but likewise retained pending accounting
and no settlement timestamp. This proves obligation preservation, not a
whole-run accounting migration. Runner/receiver release ordering remains
governed by the usage owner's contract.

At native implementation `abed921e12d543b62f57a56435419c0dafb0bc33`,
Greptile was 5/5 with zero unresolved threads and CI completed with 54
successful checks and five expected skips. At `0b6afc499f`, Greptile
again passed 5/5 with zero unresolved threads, but CI ended with 51
successful checks, five skips and three failures. Server 9/12 fails a
deterministic managed-skills maintenance assertion newly inherited from
master `198218bf` in merge `c80e00ad`; that test is absent from the PR
head, and the storage owner has the explicit-StorageService fix in
#18357. Runner 2/2 passed 2,283 unit cases but its runner received a
shutdown signal during the long stream probe; its cancelled step and
aggregate failure are preserved. No blind retry was used. Current
`af9e2d157d` checks are pending; the matcher-only change passes 144
focused cases and Product E2E typecheck. Earlier scheduling-sensitive CI
failures and the interrupted unsharded local test run remain recorded in
the dated plan. CI runs the repository's normal test partitions. Final
verification does not claim Railway rollout, uninterrupted HTTP service
or whole-webserver filesystem loss.

</details>

## Risks

- The task-pointer repair passes its assembled regression. The first
live repair exposed pre-acceptance ordering and the fresh review exposed
a replay lock-order issue; both are fixed and pass real Postgres tests
at `0862062`. The following live attempt exposed the
verified-running-versus-suspended preparation gate. Its narrow fix
passes 91 focused cases at `64c0b746`. The next live case exposed
synthetic attachment IDs; `7a203274` fixes that field selection and
passes real Runner authentication. The subsequent queued continuation
exposed strict retirement maintenance and a false default-home change;
`39a4343` fixes both with real Runner/Postgres and fingerprint
regressions. The `39a4343` live continuation failed again despite green
CI. `283e05ffaa` repairs the actual native-observed admission ordering
and reproduces/fixes the JSONB skill-order fingerprint drift. Both pass
targeted real-Postgres regressions and the live active plus queued
paths. The definition 6 post-C browser navigation timed out before
admission. Explicit definition 7 now verifies native continuation
through the ordinary comment API; its strict post-C native gate failed
after a real dispatch and remains historical failed evidence. The final
fc68584 repair now passes its fresh strict 49-check Linux/Daytona
campaign; the prior failed grades remain unchanged. Browser reconnection
is handed to its own workstream with the original failed evidence. No
prior failed campaign is reclassified as passing.
- Incorrect checkpoint/source binding or stale ownership could duplicate
external work. Missing evidence remains a hold; existing receipt and
finalization owners keep uncertain effects unresolved.
- Recovery must retain maintenance writes after accepted results without
allowing a stale business turn to write. Real lock-wait and generation
tests cover that boundary.
- The current two-connection paired burst profile fails its absolute
drain gate in both baseline and candidate, despite passing relative load
gates and all correctness checks. A causal capacity diagnostic selected
three slots; the final controlled cap-three profiles pass unchanged
thresholds. Full application replacement and two-server overlap capacity
remain separate. There is no new streaming writer, pool or recurring
idle scan.
- The remote sandbox and Runner must survive the recovery window.
Provider auto-stop is a separate lifetime bound from reconnect grace;
the explicit qualification fixture uses a longer idle window.
- Workspace and provider backup availability remain external
dependencies. This PR does not certify whole-webserver filesystem loss,
uninterrupted HTTP service or a Railway rollout.

## Model Used

Implementation and initial verification used OpenAI GPT-6 through Codex;
the initial hosted snapshot was not exposed. The follow-up qualification
used three OpenAI `gpt-6.1-sol` workers coordinated through Codex, with
repository tools, code execution, CI and scoped test infrastructure.
Context-window size is not exposed.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass (focused and exact-source
application/cost checks pass; full forced CI passes; earlier local
embedded-PG setup failures remain recorded)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green (exact fc68584 full CI and
auxiliary checks pass; forced complete test partitions)
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
(exact fc68584 check and edited summary pass; all six threads resolved)
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-31 07:33:52 -05:00
DottaandPaperclip 100b364264 Preserve selected Google services when setup resumes (#18048)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Connections control which external services an agent can use.
> - Google Workspace setup lets a person choose services and read or
write access.
> - A draft lost that choice after a declined or expired OAuth handoff.
> - Finish setup could then show all services with write access instead
of the saved narrow choice.
> - This pull request saves the exact draft choice without treating it
as granted access.
> - The benefit is safe setup recovery that preserves the person's
choice and existing account limits.

## Linked Issues or Issue Description

Refs #15545. The duplicate search found no open PR for Workspace draft
consent recovery. Related #18000 concerns satisfied gateway access
requests, not saved OAuth setup intent.

**What happened?**

A cold Workspace draft resumed with the new-account service defaults.
The selected request lived only in short-lived OAuth state. Denial
consumed that state. The picker ignored draft connections.

**Expected behavior**

Finish setup restores the same person's saved service choice. It does
not use another person's choice, a broad profile hint, or a credential
grant as draft intent. An old draft with no reliable choice asks the
person to choose services.

**Steps to reproduce**

1. Start a new Google Workspace connection. Select Gmail read-only. Turn
off Drive and Calendar.
2. Continue to Google, then decline authorization.
3. Close the setup page. Return through Finish setup.
4. Open the service picker. Before this fix, all three services can be
enabled with write access.

**Paperclip version or commit**

Reproduced in tests on master
`820c458465fa40137c81fe510f3e6dc573b4f895`.

**Deployment mode**

Authenticated and local source builds. The source regression uses real
PostgreSQL fixtures and the production React setup components. Live
provider acceptance of this repair is still pending deployment.

## What Changed

- Save validated, non-secret draft intent before managed or
customer-owned OAuth. Bind it to company, connection, actor, grant kind,
and subject.
- Restore that intent after denial, state expiry, and cold Finish setup.
Keep active reconnect bound to its saved grant. Do not change
new-account defaults.
- Preserve agent-to-human setup handoffs. Consume only the addressed
person's reviewed proposal. Keep other people's proposals.
- Lock and merge the current draft before saving intent. Return 409 if
its credential identity or method changed during setup.
- Preserve the latest saved choice across overlapping customer-owned
starts. Merge both current configuration records under short locks.
Reject stale client-binding changes. Keep each OAuth state's own
requested scopes.
- Add shared, service, handoff, picker, and cold-page regression tests.
Update the connector contract and existing feature plan.

- Route the default ungrouped test/release paths through six sequential
exact-cover chat partitions. Preserve remaining server/native coverage,
explicit grouped CI, selection-first execution and shared-database
paths.
- Correct the retention test driver so pending owned real I/O does not
advance logical deadlines. Pump zero-duration connection timers and add
a held-I/O regression; keep production scheduling and original timing
assertions unchanged.

The shared helper is needed by the server and picker to validate the
same narrow binding. It does not resolve credentials or grant access. No
production schema migration, new route, provider scope or deployment
configuration is added. The test-harness changes do not change
production timers.

## Verification

### Current candidate: source qualification passed; live acceptance
pending

- Current published candidate:
`82d13d4d698a5579378b5d506cb7a1f9cb64b5c8`, tree
`78d6a821ce53f481fe3e9991edce56f0acffb22f`. It combines the Workspace
repair with launcher commit `bf29c9` and retention-test commit `e25987`,
then integrates master `493e229d93ba7798e80152f4549e2e9177ce50ae`. The
integration brings 40 upstream commits across 713 files. One launcher
conflict keeps upstream validated CI selection and its selection-first
path, then applies six default chat partitions only without a selection.
The authored PR diff has 16 files, 833 additions and 100 deletions; it
adds no authored lockfile or `.github` changes. The public head is
confirmed at this revision. Fresh CI and review passed as recorded
below. Source qualification is complete using exact-tree full CI and the
local results below. The separate local whole command was interrupted by
host disk protection and is not called a pass. Live repaired-draft
acceptance remains pending deployment.
- Exact clean `82d13d4` passed one Node 24.19.0 builtin-only run: 41/41
cases (37 launcher and four CI-workflow cases), zero failures/skips.
HEAD, tree and relevant file hashes stayed unchanged and clean before,
at start and after. This proves launcher fixtures, not real chat
execution, current typecheck/build, the dependency-backed selection
graph, or full feature acceptance.
- The new default ungrouped whole command uses six sequential
exact-cover chat partitions, then the remaining server suites,
workspaces and serialized suites: 28 expected invocations. It preserves
all native suites, including upstream usage coverage. The plain
ungrouped release launch path also changes. Explicit grouped CI,
validated selection and shared-database execution stay unchanged.
Launcher hard RED had three expected body failures and two unchanged
passes; the repaired focused five and final 37 passed. A later 41-case
staged-merge pass is retained separately; the clean 82 run above is the
frozen proof.
- Fresh [CI run
41153113944](https://github.com/paperclipai/paperclip/actions/runs/41153113944)
completed successfully on October 31 at 01:14:53 UTC. Current head has
52 successful check runs, four conditional skips and no pending/failing
checks; legacy Snyk also passed. The skips are test-file selection, the
optional paired benchmark and two Storybook checks. The full
server/chat/workspace/serialized matrix, all eight e2e shards, normal
build, build-gap typecheck, Runner checks and final aggregate gates
passed. Build and all three chat job logs identify checkout
`e5e831fd3a8534d0d0f1e892118c0f8fbe12dd92`, merging this head into
`493e229d93`. Its Git tree is exactly
`78d6a821ce53f481fe3e9991edce56f0acffb22f`, identical to the clean
candidate. The six real chat partitions passed 314, 358, 273, 239, 321
and 311 cases: 1,816 total. Other cases shown as skipped in each
partition were selection exclusions, not extra passed cases. This is
current tree-equivalent CI proof, not a pass of the separate default
ungrouped local whole command.
- Fresh [Greptile
summary](https://github.com/paperclipai/paperclip/pull/18048#issuecomment-6473856992),
edited October 31 at 01:05:04 UTC, explicitly reviews exact head
`82d13d4` at 5/5 with no actionable code issue. Its exact-head check
passed. The prior overlapping-start discussion is resolved. This review
is source-only, not provider or live acceptance.
- Exact clean `82d13d4` passed full recursive typecheck and normal `pnpm
build` on the independent darwin/arm64 snapshot. Typecheck finished on
October 31 at 01:27:33 UTC; build finished at 01:28:33 UTC. Both exited
0. Normal native preparation and code signing passed. Source HEAD, tree
and tracked/untracked state stayed unchanged and clean. `pnpm
check:token-gates` also passed all token, palette and ClipLab checks on
this candidate. The earlier forced-clone `ENOSYS` preflight remains
recorded as setup failure, not an assertion result.
- The unchanged default `pnpm test:run` started at 01:51:33.796 UTC on
clean exact `82d13d4`. All six real chat partitions passed: 358, 314,
273, 239, 311 and 321 cases, or 1,816 actual cases. The original FIFO
and ambiguous-retry cases both passed under their unchanged 15-second
limits. General-server then reported 37 completed file rows with 5,438
passed cases and five default remote-continuity skips, including all 498
tool-access service cases and all 83 connection-route cases. At 02:39:44
UTC, the unchanged 5-GiB host-disk guard terminated the owned run. The
child ended with SIGTERM and the container/harness exited 143, with no
OOM or recorded assertion failure. Only seven of 28 RUN invocations
started. Retention had no completed local row. Later invocations did not
run. This whole local command is interrupted/incomplete, not passed.
- A coverage check found no default suite missing from current full PR
CI. The maintained launcher tests prove exact coverage for all 12 PR
server shards, chat and five native suites; all configured workspace
projects; and all nine serialized shards. The final Runner CI shard
executes the five native server suites. The 41 local launcher/workflow
cases cover six sequential chat children, per-child isolation, native
retention, fail-fast propagation and unchanged explicit
selection/shared-database paths. The actual six-chat run above exercises
that changed default path. The remaining unqualified local difference is
uninterrupted sequential whole-command composition and resource
accumulation, not omitted test selection. Current exact-tree full CI
supplies broad source-test qualification; no local whole-pass claim or
provider acceptance is inferred.
- A task-owned remote runner was considered to complete that separate
composition check. Its provider rejected the requested allocation with
per-sandbox limits of 8 GiB RAM and 10 GiB disk. No sandbox was admitted
and no remote tests ran. No tests, timeouts, assertions, database
synchronization, source or provider settings were changed to avoid the
capacity limit. Historical a0 failures remain below. No deployment or
live repaired-draft acceptance has run.

### Bounded follow-up on the prior source

- On a0, one finite phase-traced chat diagnostic executed exactly the
two failed cases. Both passed (1,374 and 1,767 ms); 1,814 other cases
were filtered, not passed. This did not reproduce a blocked await or
establish the original monolithic timeout cause. No assertion or
15-second limit changed.
- The retention diagnosis preserved an initial zero-body selector
failure, then corrected only the selector: one original case passed in
783 ms, with 42 filtered. Trace showed the old settling helper advancing
logical time while real I/O was active. A new held-I/O regression then
failed hard because the old helper advanced 1,000 ms. This proves a
test-driver defect, not the precise cause of the old 5,340 ms full-run
gap.
- The first manual-clock repair failed the complete 44-case file: 43
passed, one body hit 15 seconds and cleanup hit 30 seconds. Its planned
mutant did not run. Source then identified a fresh PostgreSQL
connection's zero-duration timer. The corrected driver pumps
zero-duration timers while initial readiness or tracked I/O is pending,
without advancing logical Date. That pre-integration file passed 44/44
with no skips. A separate scratch-only 5,000 ms normal-continuation
mutant failed the original hard `5000 < 3000` assertion; its expected
failure is not a test pass. The original page-count, fairness, expiry
and quiet assertions stayed intact. The authored repair does not change
the production worker. The merged master changes an older retention case
and dependencies; these pre-integration results are not a complete 82
retention or whole-suite pass.

### Historical qualification: SHA-bound, not 82 acceptance

- Historical a0 candidate: `a0f9089fc1ff466bf4e1eeddc5b1a910d09e380b`,
tree `b9d73713319dcd52b9eaa6053008b5190e43fdf1`. It adds the
overlapping-start repair to parent `6c18`, which already merged pinned
master `1511c92965325249ed6b52dd5be52eb6d736fbfa`. That candidate
changed 12 files. Its CI and review passed; its local full qualification
remained failed/incomplete.
- Greptile's previous `6c18` review found P1 [Latest service choice gets
lost](https://github.com/paperclipai/paperclip/pull/18048#discussion_r4425965828),
confidence 4/5. Two hard-assert regressions reproduced it on untouched
`6c18`: the already-bound path overwrote the later choice, and real
first-use client stamping also restored the old choice. Existing OAuth
states/grants were not widened, but a later setup could restore an older
request. The new repair covers both write boundaries without holding
locks over external work or copying another attempt's scopes.
- The complete affected service file passed 498 tests with no failures
or skips. All 31 required controls ran, including both unchanged RED
cases, 14 new client-drift cases, seven earlier identity guards,
reconnect/cold-resume cases and upstream transaction tests. The tested
three-file patch is byte-identical to this commit; the connector
contract update is separate. Independent scoped review found no
additional actionable issue. Fresh Greptile reviewed exact `a0f` at 5/5
with no actionable findings. The previous P1 thread is resolved.
- On exact `a0f`, the five shared/UI files passed 312 tests. An initial
complete connection-management run then failed: 74 passed, eight timed
out at the unchanged 15-second limit, and one AI-account verification
returned 422 instead of 201. The Google addressed-user handoff passed.
The container exited 1 without OOM and stopped before chat/token/whole
tests. This material failure remains retained and its cause
unclassified; the later controlled recovery below is not a causal
explanation.
- One diagnostic executed the first failed gateway case and the two AI
cases with temporary phase-only tracing. All three passed at 8.516,
5.511 and 3.523 seconds; 80 other cases were filtered. Original hard
assertions and timeouts stayed unchanged. No timeout or suspected late
provider cleanup reproduced, so the complete-file failure remains
unresolved. Vitest exited 0; the harness exited 1 because its trace
parser missed ANSI prefixes. All 203 events were recovered from retained
logs without rerunning tests. Instrumentation was removed. This is not
acceptance.
- Historical a0 CI
[41097596364](https://github.com/paperclipai/paperclip/actions/runs/41097596364)
completed successfully: 52 successful checks, two expected Storybook
skips and no failed/pending checks. Legacy Snyk passed. All 48 CI jobs
passed, including all 1,816 chat cases and explicit passing lines for
the original 20 local failures. [Server
11/12](https://github.com/paperclipai/paperclip/actions/runs/41097596364/job/124207469276)
explicitly passed the complete 83-case connection file in 129.49
seconds, including all nine local failure titles. The actual checkout
was synthetic merge `06851da6eb969d63e1c7dc9f7c95f08d09fa4ff1`,
combining `a0f` with `aa58fa107389e8b9ae5949f7ad815943dfd94292`. This is
not standalone local `a0f` qualification and does not erase the nine
local route failures.
- Linux admission uses Node 24.22.2, pnpm 9.15.4 and Rust 1.97.1. Frozen
offline install, exact native hashes and real migrated PostgreSQL 18.1
passed. Native/protocol/build/lock inputs are identical between `6c18`
and `a0f`; validated cache reuse retains the actual `6c18` native-build
provenance. The selected packaged release binary is not called a fresh
`a0f` build. Database synchronization settings stayed on. This admission
alone does not explain the route failures.
- A fresh Mac snapshot of exact `a0f` passed frozen install, workspace
prerequisites, full sequential recursive typecheck and normal `pnpm
build`, both on their first attempt. Typecheck completed at 17:43:05
UTC, build at 17:44:43 UTC; both exited 0 with clean tracked/untracked
source. Pinned Node 24.19, pnpm 9.15.4, Rust 1.97.1, package concurrency
one, Cargo jobs one and a 12 GiB V8 heap ceiling were retained.
Largest-process maximum RSS was 7,668,154,368 bytes for typecheck and
10,038,837,248 bytes for build, not aggregate tree peaks. The first
build correctly withheld its freshness stamp because 125 ignored, pinned
Copilot assets appeared during preparation; exact path/hash analysis
explained this. The normal build then recorded a genuine stamp and
reused Cargo outputs in 1.18 seconds. No manual stamp, source workaround
or gate retry. This is darwin/arm64 static/build proof, not Linux
packaging/runtime or full tests.
- The historical a0 candidate's token checker passed all four gates
across 1,410 files, run directly with pinned Node 24 against the script
behind `pnpm check:token-gates`.
- The single controlled complete-file comparison passed: baseline `6c18`
83/83 in 287.07 seconds, then candidate `a0f` 83/83 in 293.03 seconds,
with zero skips. All nine earlier failure titles passed on both. Both
child/container exits were 0, no OOM/interruption; source and
native/resolver/PostgreSQL guards matched. This ran only after all owned
Mac compilation ended, with fresh processes/databases and identical
four-CPU-quota/6-GiB/overlay inputs. No filtering, instrumentation,
assertion/timeout/source changes or retry loop. This establishes
standalone complete-file recovery, not the cause of the earlier eight
timeouts/AI 422.
- The first unchanged full `pnpm test:run` on exact clean `a0f` ran from
October 30 at 18:01:43 UTC to 21:06:19 UTC. It failed naturally with
test and container exit 1, without OOM. General-server reported 1,257
passed, one failed and seven skipped files; 28,633 passed, one failed
and 103 skipped tests. Only the first of 22 invocations ran. The later
four groups and 21 invocations did not run. The sole failure was the
unchanged chat-shard CLI meta-test: its nested projectless pnpm lookup
hit the offline network guard. This was a failed full gate, not Google
provider acceptance.
- A finite environment pair reproduced that one meta-test failure, then
passed the same unchanged case after supported `corepack prepare
pnpm@9.15.4 --activate` as the existing non-root node user. The cached
pnpm payload was identical. Only the missing node-user last-known-good
record changed. Core source, dependencies, lockfile, fixtures,
assertions, timers and offline guards stayed unchanged. This isolates
the nested collection defect; it does not explain the earlier route
failures or complete the full gate.
- The corrected unchanged full command ran from October 30 at
21:29:03.500 UTC to October 31 at 00:02:44.207 UTC on the same exact
clean `a0f`. It failed naturally with exit 1, signal null and no OOM.
Source stayed clean before, at start and after. It retained two visible
CPUs/quota, 6 GiB, private IPC, normal overlay, matching native inputs,
synchronized real PostgreSQL 18.1, and the default five groups/22
invocations. Only the first general-server invocation ran; the other 21
did not run. General-server reported 1,265 files: 1,256 passed, two
failed and seven skipped. It reported 28,737 tests: 28,631 passed, three
failed and 103 skipped. The two chat cases emitted `Test timed out in
15000ms` at `chat-channels.integration.test.ts:77310` and `:81790`, with
durations of 15,045 and 15,058 ms. These were the durable pre-run FIFO
notice and ambiguous GitHub text restart/retry cases. The retention case
emitted `expected 5340 to be less than 3000` at
`skill-version-retention.test.ts:593`. Its real duration was 1,727 ms;
5,340 ms was the recorded fake-time directory-page gap, not a deadline
timeout. The timeout stacks do not identify the blocked internal await.
The cause of these failures remains unclassified. Inside this same
failed run, the complete 83-case connection file and 498-case service
file passed. The former Corepack meta-case also passed in 6,396 ms.
These component passes do not waive the failed/incomplete full gate. No
rerun, cancellation, timeout/assertion change or full-pass claim. A
later fresh two-case phase trace passed both chat cases; it did not
reproduce or establish the original timeout cause. At that checkpoint,
the PR stayed draft.
- Prior `6c18` targeted checks passed 930 tests across eight files and
token gates. Its selected queue group passed all 53 cases, including the
original 20 failures and 12 new named controls. Backlog cases took 10.49
and 8.45 seconds under the unchanged 15-second limit. Another 1,763 chat
cases were intentionally filtered. This is historical targeted recovery,
not a full pass or proof of the new repair. No timeout or assertion was
relaxed.
- Prior `6c18` full local qualification failed during serial typecheck:
server TypeScript was killed with code 137. Docker confirmed OOM in the
6 GiB container; full tests and build never started. The failure is
retained. The new Mac resource plan avoids repeating that undersized run
and does not change the shared Docker VM.
- Prior CI
[41089793558](https://github.com/paperclipai/paperclip/actions/runs/41089793558)
completed successfully for synthetic merge
`a73bffcfa3ede051961bcabcfa576c703d10c932` (`6c18` plus
`abc270ee4c03e13b4d6eaad156a41b4ebed4bb0a`). All 48 CI jobs passed; all
1,816 chat cases passed, including explicit log lines for the original
20. Check runs were 51 success, two expected skips and one Greptile
failure; legacy Snyk passed. These results do not qualify `a0f` or erase
its local route failures.
- Red proof on the unmodified master baseline: cold picker and Finish
setup restore broad defaults; managed and customer-owned drafts lack
saved intent. The stale setup tests also fail before the lock guard.
- Live staging baseline `b25f3e2af8e77d882cd22d36ca55640e6468e46f` also
reproduces the ordinary failure: select Gmail read-only only, cancel at
Google, reload the connector catalog, then Finish setup. All three
groups return enabled at read/write. Authorization was declined; no new
Google access was granted. This is baseline failure evidence, not a
deployed-fix pass.
- Historical affected suites: 800 tests passed before the final lock
guard. The final focused service and handoff cases passed 126 tests
after that guard. These are not results for the integrated candidate.
- Historical `pnpm -r typecheck` and final lock-guard server typecheck
passed. The historical a0 candidate passed the full recursive gate
separately, as recorded above.
- `pnpm build`: passed again on the final lock-guard source in commit
`1c31cde0ed199fbf4e41b7649590554f7886dfc2`.
- Historical `pnpm check:token-gates` passed; the historical a0
candidate's direct checker pass is recorded above.
- `pnpm test:run` on macOS failed on the frozen commit. It exited 1
after 9,432.41 seconds. General server results: 1,195 files passed, 10
failed, eight skipped; 26,706 tests passed, one timed out, 157 skipped.
Nine setup hooks timed out while starting embedded PostgreSQL. The
retained log records host-wide semaphore exhaustion (`semget`), not disk
exhaustion. One unchanged publication-text performance case also timed
out. Its cause is not established. Later workspace and serialized groups
did not run. This is a failed and incomplete local gate.
- The independent full-source Linux run also failed and was incomplete
on the same frozen commit. Native and real-database admission passed.
Chat integration reported 20 failures in 1,593 tests. Tool-access passed
all 479 tests. Native-session-executor passed all 965 tests. Docker
interrupted the run after about 48 minutes on October 29. The container
exited 143 and was not OOM-killed. The run produced no final group
totals or detailed assertion summary. Shell trap metadata reports zero,
but this is not a valid test-pass result. Source and evidence remain
unchanged. The focused diagnosis below retains those failures; their
cause is not assumed from the interruption. Neither historical local
full run passed.
- A fresh focused replay on the frozen source then executed exactly
those 20 case bodies. All 20 failed; this was not a setup-hook failure.
The two backlog cases reached the unchanged 15-second timeout. The 18
FIFO cases failed on missing notices or receipt rows. All 18 FIFO cases
passed when run alone in a fresh process and database. This supports an
order interaction, not a complete cause or baseline conclusion. A
separate two-backlog control used RAM-backed temporary storage and real
PostgreSQL with synchronization settings on. One backlog case passed in
10.65 seconds; the other still timed out at 15 seconds. No source,
assertion or timeout was changed. The full local gate remains open.
- Earlier mixed-revision run: it began before the final guard and
imported older source before collecting later regression cases. It
failed those new cases with that older cached module. This run is
retained, not counted as candidate acceptance. The fresh focused run
passed all seven stale-setup cases. No case was skipped to hide a
failure.
- Historical remote gates for `1c31` were terminal and clean: 53
successful contexts and two expected Storybook skips. Main CI
[40720536514](https://github.com/paperclipai/paperclip/actions/runs/40720536514)
passed. Greptile reviewed exact head
`1c31cde0ed199fbf4e41b7649590554f7886dfc2` at 5/5 with no actionable
findings; the separate review job also passed, and there were no inline
review comments. These results do not qualify `6c18`.
- CI source qualification: the chat jobs checked out synthetic merge
`ef36746b3d2ec52ba5727dcbe4da265a03421fe4`, which merges the PR into
`7d75ae0569e41786640cf09647ae8849411d2f22`. All 20 locally failing case
names have explicit passing CI log lines. These passes do not establish
standalone local acceptance of `1c31`. The merge adds two upstream Teams
tests, so it collects 1,595 chat cases instead of 1,593. Neither
backlog/FIFO assertions nor their timeouts changed.
- Independent source review found an earlier credential-identity race.
The guard and seven deterministic cases resolve that finding. A later
integration review missed the separate overlapping-start race. Both RED
failures and that review miss are retained. The narrow follow-up repair
passed 498 service cases, independent source review and fresh remote
CI/5-of-5 review; full local qualification remains incomplete.
- Source qualification is ready for merge. Live repaired-draft recovery,
delivery and Google approval are not established by these results. The
local whole command remains explicitly incomplete.

## Risks

- Historical drafts without a matching intent now need an explicit
service choice. This is deliberate and prevents silent broadening.
- A concurrent credential or method edit now returns 409. Reloading lets
the person review the changed setup.
- Overlapping starts keep separate requested scope sets. Updating draft
intent does not relabel an earlier OAuth state's consent request.
- Saved intent is not consent. Provider-reported scopes and current
action policies still control discovery and dispatch.
- No migration is needed. No existing token or grant is rewritten by
saving draft intent.

- Default ungrouped launch paths now execute six chat children in
sequence and 28 whole-command invocations. Exact coverage, local
launcher contracts and all six real default chat partitions passed. A
complete uninterrupted local whole-command run remains unqualified
because of host capacity.
- The retention test-clock repair depends on owned-I/O and zero-duration
connection-timer progress. The controlled regression, sensitivity mutant
and current exact-tree CI protect the original assertion. It did not
reach a completed row in the interrupted local whole run.

## Model Used

OpenAI Codex, described by the runtime as GPT-5 based. The exact runtime
model ID and context-window size are not exposed to this task. Used
reasoning, code execution, browser verification, and independent
delegated review.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used, including the runtime metadata
limit
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have described the issue in-PR following the bug report template
- [x] I have not referenced internal or instance-local Paperclip issues
or links
- [x] My branch name describes the change and contains no internal
ticket or instance identifier
- [x] I have run tests locally and they pass — exact clean 82 passed 41
launcher/workflow cases and all 1,816 real default chat cases, full
recursive typecheck, normal build and token gates. Full exact-tree PR CI
passed. The separate local whole `pnpm test:run` was interrupted by disk
protection and remains incomplete; it is not claimed as a local whole
pass.
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented risks above
- [x] All Paperclip CI gates are green — current exact-head checks
passed; the verified CI checkout tree equals clean 82. The separate
interrupted local whole command is disclosed above.
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups —
fresh exact-82 summary and check passed; the earlier finding is
resolved. This is source review, not acceptance.
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-30 22:02:58 -05:00
DottaandPaperclip 7114582c63 fix(ci): track repository inputs across test projects (#18398)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - PR CI selects affected tests before allocating parallel runners.
> - Recent audits retained about 96% of test files despite narrow
changes.
> - Unchanged consumer packages kept full coverage, and source scans
confused data fields and message text with runtime loaders.
> - File reads need explicit edges that imports alone cannot provide.
> - This change follows consumer graphs and known file inputs while
retaining unknown effects.
> - The AWS CODEOWNERS gate stays in front of runner allocation.

## Linked Issues or Issue Description

Refs #18376 and #18362. Narrow source changes still selected most tests
because consumer packages kept full coverage and known file reads were
treated as arbitrary input. Expected behavior is to retain affected
import/file consumers and unknown inputs, then partition only the
selected files.

The shared storage failure found during the audit was fixed upstream in
#18357. The candidate merge ran all 18 managed-skill storage tests
successfully in [Linux
qualification](https://github.com/paperclipai/paperclip/actions/runs/41140209697/job/124352365547).
This branch includes that upstream commit; no additional storage
implementation or permanent diagnostic job is included.

## What Changed

- Assess every Vitest project in the coarse plan, including unchanged
consumer workspaces.
- Add dependency edges for statically resolved module-relative
filesystem reads and directory listings. Keep unknown paths, writes,
escaped APIs, mutable path objects and untracked inputs conservative.
- Distinguish data keys, erased types and message strings from runtime
globals, loaders and mock bypasses. Retain destructured globals, aliased
object reads and mocked filesystem/path resolution.
- Normalize `fs` and `node:fs` before recording coverage so a known read
cannot hide an unknown one.
- Review the Drizzle SQL/schema entry points by hashes of their complete
import closures. CommonJS/dynamic loaders reject the fingerprint;
drivers and migration readers remain opaque, and dependency updates
revoke the review.
- Record file input edges and per-test retention reasons in selection
audit artifacts.
- Add cross-workspace, mixed-import, symlink retargeting, setup-input
and dependency-review regression cases. Object-valued URL constants are
explicitly opaque with and without mutation. Update the developer guide.
- Preserve the AWS CODEOWNERS authorization gate, runner-group
restrictions and existing lane ownership.

## Verification

- Final head `eedad362e84d6b68f0f048c92db6032e45622c46` passed [complete
Actions
CI](https://github.com/paperclipai/paperclip/actions/runs/41144233520)
on attempt 1. Overall status: 57 successful checks, three intended
skips, and one neutral Paperclip review. Both Greptile and Paperclip
rated this head 5/5; zero unresolved review threads.
- All 17 local selector tests passed: `node --test
scripts/ci/test-selection*.test.mjs`. Final [Linux
qualification](https://github.com/paperclipai/paperclip/actions/runs/41144233203/job/124365428832)
passed all 18 selector/impact tests without skips, plus real workspace
selection and cache/routing checks.
- Same-tree local comparison against the previous selector at
`d331d8481a`: Inbox changes selected 466 rather than 700 files (33%
fewer); auth middleware changes selected 2,141 rather than 2,788 files
(23% fewer). The sampled plans retained the same 2 and 24 jobs under
existing weighted budgets. Final Linux qualification selected 466 files
for Inbox and 1,949 for auth/config-test changes; platform-dependent
graphs differ, so these are not a Linux before/after comparison.
Chat/native Runner lanes retain their existing ownership and are
excluded from these counts.
- Local `pnpm -r typecheck`, `pnpm build` and `git diff --check` passed.
The complete local `pnpm test:run` was attempted and stopped after
repeated embedded PostgreSQL startup failures; initdb reported exhausted
macOS semaphore capacity. Full Linux CI passed on the final combined
tree.
- The storage regression was corrected upstream in #18357. [Focused
Linux
verification](https://github.com/paperclipai/paperclip/actions/runs/41140209697/job/124352365547)
ran all 18 managed-skill tests successfully, with no skips; the final
full CI run also passed its server lane.

## Risks

- Unknown effects must retain their consumers. Regression cases cover
mixed builtin spellings, dynamic paths, escaped/mocked APIs, global
aliases, reviewed dependency changes and cross-package file reads.
- Graph analysis now visits unchanged consumers. Its added work must be
included in rollout latency measurements; fewer test files do not by
themselves prove shorter end-to-end PR time.
- The weighted shard budget deliberately remains unchanged. These
samples reduce file execution without reducing allocated jobs.

## Model Used

OpenAI Codex, based on GPT-6, with reasoning, repository inspection,
code execution and GitHub tools. The exact serving variant and context
window are not exposed in this session. No subagents were used.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass — targeted selector suite;
full local suite limitation documented above
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-30 21:37:39 -05:00
Devin FoleyandPaperclip 81ecaf0654 fix(server): bound failed lifecycle verification (#18383)
Failed lifecycle verification could allocate another test environment every minute indefinitely. Count failed host verification tests separately from claims, persist a repair wait for confirmed configuration failures or three generic failed tests, and clear it through authorized retry or execution configuration changes.

Preserve typed temporary execution-target failures through adapter checks so timeouts, transport failures and interrupted probes keep automatic recovery. Retain existing readiness, authorization, termination and cleanup gates. Document the policy and add real PostgreSQL persistence and actual OpenCode adapter regressions.

Verified 398 focused tests (one Windows-only test skipped on macOS), repository-wide typecheck and build, structural checks, fully green current-head CI and Greptile 5/5 with no unresolved comments.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-30 15:29:43 -07:00
DottaandPaperclip 198218bf55 fix(config): require shared storage for managed cloud (#18350)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Managed Cloud instances must retain shared objects and secrets
across server replacement.
> - Implicit storage defaults can select local disk or an unintended
bucket.
> - Cloud runtime settings now come from a canonical database snapshot.
> - This pull request validates bootstrap prerequisites before database
setup and effective S3 settings after snapshot resolution.
> - The benefit is an actionable refusal before local signing state or
HTTP setup, while valid canonical Cloud settings work.

## Linked Issues or Issue Description

**What happened?**

A managed Cloud instance could start with local disk storage, an
implicit bucket, or a local key file. After canonical Cloud
configuration landed, checking only environment or file values would
also reject a valid database bucket. Shared schema defaults could make
an omitted raw bucket appear explicit.

**Expected behavior**

Managed Cloud requires external PostgreSQL, a stable environment master
key, and effective S3 settings with a nonblank bucket. The canonical
snapshot remains the configuration authority. Invalid configuration
refuses startup before signing or HTTP effects. Self-hosted defaults
remain compatible.

**Steps to reproduce**

1. Select managed Cloud with its tenant token or managed configuration
document.
2. Leave storage as local disk, or omit the S3 bucket from a raw
canonical snapshot.
3. Start the server. Startup must refuse. An explicit valid bucket in
the canonical snapshot must work without a file or environment bucket.

**Paperclip version or commit**

Current base: `4edd10804e2b42941aa2038e90c362c13a0b98dc`.

**Deployment mode**

Managed Cloud. Ordinary self-hosted defaults remain unchanged.

Related PRs: #18335 owns canonical Cloud runtime configuration. #18327
owns S3 run logs. #18352 owns credential persistence. #18347 owns
cutover checks. This PR adds configuration prerequisites to those
existing boundaries.

## What Changed

- Validate external PostgreSQL and a stable environment master key at
the Cloud bootstrap boundary, before database setup.
- Validate effective S3 settings after canonical snapshot publication
and before Cloud signing, runtime consumers, or HTTP setup.
- Require a nonblank bucket in the Cloud snapshot schema. Reject omitted
or blank buckets in every legacy Cloud file before one-time import
normalization, even when an environment bucket is supplied. Keep shared
self-hosted schema defaults.
- Preserve typed bucket provenance at the existing file-read boundary.
Accept explicit canonical bucket names, including `paperclip`, and
environment settings when the snapshot is null.
- Validate effective legacy storage with the existing resolver before
seeding. A rejected candidate leaves no canonical rows, so a corrected
source file can be imported on retry. Environment overlays are checked
but never persisted.
- Add real PostgreSQL snapshot and migration-retry tests, startup
refusal tests, and environment/file compatibility controls. Document
that Cloud always requires its stable environment key, even with an
external default secrets provider.

## Verification

- Latest focused acceptance passed 199/199 in six files (54.29 seconds),
using the command below plus
`server/src/__tests__/cloud-configuration-migration-postgres.test.ts`.
Real PostgreSQL proves rejected storage leaves all three migration
authority rows absent, then a corrected legacy file imports on retry. An
external-default-secrets control proves the deliberate unconditional
Cloud master-key contract.
- Before the peer correction, the frozen product diff passed 178 tests
in five files: managed-cloud-prerequisites, cloud-runtime-config,
server-startup-feedback-export, config-file, and
cloud-configuration-readers. Command: `pnpm exec vitest run
server/src/__tests__/{managed-cloud-prerequisites,cloud-runtime-config,server-startup-feedback-export,config-file,cloud-configuration-readers}.test.ts
--maxWorkers=1 --no-file-parallelism`. Real PostgreSQL used a qualified
POSIX test-only PG18.6 override because the host cannot supply the stock
runtime's SysV semaphore allocation.
- Coverage includes raw database and legacy omitted/blank bucket
rejection, valid database and environment buckets, null snapshots,
explicit default-named buckets, self-hosted compatibility, and refusal
before local signing mutation.
- The real AWS SDK configured-provider control uses a simulated loopback
S3 service. It writes, reads from a fresh provider, and deletes an
object. It also reads an encrypted credential with the stable
environment key. This does not qualify production cloud permissions.
- `git diff --check` passed. Final merges add unrelated master changes
from #18241, #18363, and #18370; the focused storage product diff is
unchanged.
- Peer review reproduced a fresh legacy local-disk import that gained
the default bucket before an S3 environment overlay. The importer now
requires a raw explicit bucket for every legacy Cloud file. Six controls
cover omission/blank values with and without an environment bucket; the
full focused rerun passed 184/184 across all five files in 194.89
seconds.
- Initial revised startup testing passed 167/168: one fixture omitted
the database URL and failed before its intended key assertion. The
corrected final run passed 178/178. An initial direct server typecheck
failed because Runner declarations were not built; this is a setup
failure, not a compile pass. Integration verification rebuilds
dependencies before full checks.
- Prior head `fae1e4aa` passed complete CI with 53 successes, two
intended skips, and Greptile 5/5.
`de71345f379cecb71dbfb219f35e14f942c10a3f` then passed complete CI (55
successes, three workflow skips, and a neutral external review), with
Greptile 5/5 and zero unresolved threads. The external review identified
the preseed rejection problem; its correction is committed at
`75e04d0d77e19dcef0a8cb070b6b518f0f173b14`. The final merge head is
`19b809ea2823a6a4e5ceb48ef2c2bac4721733d6`; [Fresh complete
CI](https://github.com/paperclipai/paperclip/actions/runs/41127309762)
passed on that head: 55 successful checks, three workflow skips, and one
neutral external review. Greptile reviewed this exact head at 5/5 with
no actionable issues. Both earlier external review threads are resolved
with the tested fixes. Earlier infrastructure retries remain documented
in [the first
diagnosis](https://github.com/paperclipai/paperclip/pull/18350#issuecomment-6529964690)
and [the runner shutdown
evidence](https://github.com/paperclipai/paperclip/pull/18350#issuecomment-6530364769).
Earlier missing SDK build and fixture metadata failures were repaired
before those passes.
- Current frozen-head CI first attempt failed one unchanged Antigravity
authentication success case in Runner Vitest 1/2 (`outcome=failure`,
1994 tests passed). The same file passed 11/11 locally in 2.33 seconds,
and identical Runner source passed the prior complete CI run. Attempt 2
retried only failed jobs (the Runner shard and dependent aggregate).
Both passed without a source change. No second retry was used. The exact
timing cause is not established. [Failed
job](https://github.com/paperclipai/paperclip/actions/runs/41127309762/job/124309181778).
- No production data, buckets, or live credentials were used. Complete
local repository suites are not duplicated in this worktree;
current-head required CI supplies the full suite gate.

## Risks

- Managed deployments with local disk, omitted buckets, file-only keys,
or missing external database URLs now refuse startup. Operators must
supply valid prerequisites before rollout.
- Required deployment environment overlays must remain stable across
replacements. For example, a saved local-disk provider with an explicit
bucket can use an environment S3 provider; removing that required
overlay correctly refuses startup until the environment or canonical
configuration is corrected. Environment settings are never silently
copied into the canonical row.
- Effective legacy storage must also pass before first seeding. A bad
candidate does not create authority rows. Existing saved rows remain
authoritative and can require environment overrides or a canonical
configuration change if they are invalid.
- A present legacy Cloud file needs an explicit raw bucket even if its
saved provider is local disk or its environment supplies a bucket.
Correct the file before one-time import, or use the existing
absent-file/null-snapshot environment-only setup. Environment overlays
are not persisted as operator choices.
- A previously stored canonical nonblank `paperclip` bucket is
authoritative. Prior normalization erased whether that value was
originally explicit. This change cannot recover that provenance and does
not reject existing nonblank canonical values.
- Validation proves configuration shape, not cloud permissions, database
reachability, or key compatibility with existing encrypted data. Keep
the master key stable across replacements.
- Cloud snapshot JSON parsing is stricter; omitted or blank raw S3
bucket values need correction. No database migration or provider
operation changes are added. These prerequisites do not prove that every
server persistence path is disposable.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

OpenAI Codex, exact model ID `gpt-6.1-sol`. Context window: unknown. The
model used reasoning, repository tools, code execution, and test
execution.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-30 16:21:46 -05:00
DottaandPaperclip 0e15c92073 feat(skills): make managed content independent of web-server disk (#18334)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Agents use installed skills and exact version pins during execution.
> - Managed skills still depended on mutable directories on the web
server.
> - A replacement server could lose acknowledged edits or remove an
unassigned skill whose directory was absent.
> - This pull request makes immutable versions the authority for managed
content and installed repository reads.
> - The server can rebuild delivery files from durable content after
replacement.
> - This establishes skills readiness for ephemeral web servers. General
server draining and workspace recovery remain separate work.

## Linked Issues or Issue Description

**Subsystem affected**

Skills services, shared contracts, database receipts, Skill Studio, and
runtime delivery.

**Problem or motivation**

A fresh web server must discover, read, edit, and deliver protected
installed skills using the same database, object storage, secrets, and
supported application artifacts. It must not need its predecessor's
files or process memory.

**Proposed solution**

Use `managed` ownership with a null source locator. Read installed
content by immutable version. Prepare packages before a short
publication transaction. Persist execution selections before
materialization. Recover exact pinned runtime assets and reject deletion
while active or recovering pins exist.

**Alternatives considered**

Reconstructing a mutable installed directory preserves the old
source-of-truth ambiguity. Permanent dual writes create two competing
authorities. This change uses one managed model after a bounded legacy
conversion.

**Roadmap alignment**

This improves the existing Skills Manager, Studio, version history, and
Cloud execution capabilities. The maintainer supplied the implementation
contract. This does not add a separate skills product or deploy fleet
changes.

Related work: #18082 supplies immutable package storage. #17273
addresses edits outside the API for linked local skills; this PR keeps
that source category separate. #2648 is a closed earlier
ephemeral-filesystem proposal.

## What Changed

- Add managed ownership and focused content publication and execution
materialization modules. Keep the archive format and package storage
tables.
- Publish managed create, save, delete, fork, rename, restore, and
catalog content with version checks. Add durable create receipts.
Preserve file-save receipt responses.
- Return file version identities. Keep Studio drafts after a conflict
and provide an explicit reload action. A delayed reload cannot overwrite
newer typing or navigation.
- Persist exact runtime selections, including empty selections. Rebuild
pinned assets and verify their admitted digests on a replacement server.
- Preserve source access on forks and disconnected copies. Keep the
existing workspace policy category for managed skills.
- Add bounded conversion, eligibility, and independent verification
phases. Load persisted Cloud configuration in the standalone CLI without
seeding or changing it. Reject partial current versions against
installed inventories; recover only complete saved content or the exact
source. Document storage migration blockers and the compatible rollback
floor.
- Add separate-process PostgreSQL/S3 qualification and update domain,
retention, policy, and UI regressions.
- Pass the plugin worker manager into Studio execution, admit restricted
`skill_test` mode through native Runner contracts, and preserve admitted
scope across native and REST tools. Native tests cannot create ordinary
tasks, browse company data, or use external tools.
- Select the exact durable Studio revision even when unassigned or Beta
skills is off. Persist Studio output and audit atomically with native
task completion, preserving the result on replay.

## Verification

- Final revision `13e8af480b88ba6fea5737bac4bd81104d604792` passed full
CI: all 49 workflow jobs completed successfully ([run
41127396098](https://github.com/paperclipai/paperclip/actions/runs/41127396098)).
This includes typecheck, test suites, Runner checks, browser checks and
build. Greptile review 15 is 5/5 on that same revision, with zero
unresolved threads. The PR is ready for review.
- Local workspace typecheck and build passed after integrating master.
Focused checks passed: 33 execution/completion cases, 52 Runner HTTP
cases, 16 managed-content cases, 17 Studio cases, the new real-process
CLI regression, map checks and UI token gates. The CLI regression proves
inspection does not seed missing Cloud configuration. Server typecheck
passed after that fix.
- The independent-process PostgreSQL/S3 matrix passed through normal
HTTP skill routes. It covers A → B → C replacement, lost commit
responses, upload crashes, concurrent saves, binary contents and
executable delivery. Metadata listing and warm selected delivery retain
zero object downloads. Local timing measurements are recorded; they do
not establish hosted latency.
- Hosted A → B → C passed on the owned disposable test tenant with
external Postgres, S3 and a real remote Paperclip Computer. Predecessor
temporary homes were absent. C read and executed B's acknowledged
managed save. New runs used repository v1 while v2 was installed. Hashes
matched an independently checked exact upstream commit.
- Compatible image rollback to `6518b323` passed. Studio retained the
unassigned fork's C save. A fresh remote run executed the newer managed
content and historical repository pin. The actual shell event confirmed
expected hashes, stdout, exit 0 and mode 0555.
- Runtime candidate `9200e3fcb4` deployed successfully ([Cloud run
41124147876](https://github.com/paperclipai/paperclip-cloud/actions/runs/41124147876)).
The final Studio test delivered only the unassigned fork's exact v3,
executed its script and persisted a successful output snapshot.
Independent command-event inspection confirmed all three hashes, stdout,
exit 0 and mode 0555. All 14 installations were version-backed.
Independent verification checked all 25 versions: 23 remote objects, two
bundled database snapshots, zero blockers.
- The deployed image is `9200e3fcb4`. Later master integration, the
client-only delayed-reload draft guard and the CLI bootstrap have
separate automated proof. The CLI bootstrap was also exercised against
the tenant's stored configuration and storage through the same read-only
services. This PR does not claim that the deployed image is the final PR
revision.
- Live Studio checks exposed worker wiring, admission, access scope,
exact selection and completion-publication gaps. They are fixed. Failed
attempts remain in the evidence. The full local suite exceeded 80
minutes under host contention and was stopped. Later combined/isolated
local attempts also timed out; they are not counted as passes. Full CI
covers the integrated suites. Earlier CI found an obsolete restart-scope
fixture, which was corrected and passed all 52 HTTP cases.
- Reproduction and migration:
[`doc/skill-ephemeral-web-servers.md`](doc/skill-ephemeral-web-servers.md).
Source revisions, deployments, versions, run IDs, hashes and failure
history:
[`doc/plans/2026-10-30-ephemeral-web-skills.md`](doc/plans/2026-10-30-ephemeral-web-skills.md).

## Risks

- Legacy conversion requires stopped admission and retired
filesystem-authoritative writers. Pre-conversion binaries are not
supported rollback targets afterward.
- Cloud readiness requires remote object storage. Local provider
receipts and provider mismatches remain blockers until objects are
copied and verified.
- Linked local sources retain filesystem semantics and are outside the
cloud guarantee.
- Cold reads still fetch the existing archive format. Warm runtime
preparation retains the verified-cache path.
- Bundled reconciliation preserves an installed head. Existing release
snapshots remain selectable. An older server must not replace a newer
head with its shipped files.
- No production volumes, fleet defaults, or general deployment
coordination change in this PR.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, repository tools, code
execution, and browser use. The exact backend model ID and
context-window size are not exposed in this session. No subagents were
used.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-30 16:18:27 -05:00
DottaandPaperclip 56957f2bd9 fix(ci): isolate test selection and require current CI CODEOWNERS (#18376)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - PR CI selects affected suites and test files to reduce feedback
time.
> - A selected test inherited the parent selection when it launched an
independent runner fixture.
> - Ordinary source filenames containing config or setup also forced
broad coverage.
> - AWS runner access must depend on current CI CODEOWNERS, not only a
stored numeric roster.
> - This pull request fixes both selection problems and verifies owners
before AWS allocation.
> - Contributors retain GitHub-hosted CI. Authorized maintainers retain
AWS test and final verification jobs.

## Linked Issues or Issue Description

Refs #18362 and #18348.

The selected server run for #18369 failed in
`vitest-chat-shards.test.ts` because its temporary fixture inherited
`PAPERCLIP_CI_TEST_SELECTION` and attempted `git rev-parse HEAD` outside
a Git repository. #18366 could not use graph selection because
`session-config-metadata.test.ts` matched the broad filename rule.

The AWS setting was already enabled. The reviewed outsider PRs correctly
used hosted runners; a maintainer PR used AWS, including final
verification. This change strengthens that boundary rather than enabling
AWS for outsiders.

## What Changed

- Remove selection settings from Vitest child environments after the
wrapper validates the selected shard.
- Match conventional Vite/Vitest configuration filenames rather than any
occurrence of config or setup. Keep graph tracking for actual setup and
configuration dependencies.
- Bind rerun actor lookup to the exact run attempt. Require the author,
event sender and rerun actor to be current CI CODEOWNERS and members of
the existing numeric allowlist. Read the resolver and CODEOWNERS from
one protected master revision.
- Run metadata authorization on GitHub-hosted capacity before any AWS
allocation. Keep authorized test and final verification placement on the
AWS fleet.
- Add a real selected-server regression that launches nested chat
fixtures, negative authorization cases, and qualification for a real
config-named test.
- Update the developer and profiling guides.
- Retire eight legacy PR workflow SHA authorizations and one deleted
qualification-branch reference from the live `paperclip-public-pr`
runner group. The remaining three references are the trusted PR workflow
and the existing full-stack/protocol evaluation workflows on master. No
active PR run referenced the retired versions.

## Verification

- Selection regression tests: 13 passed, including the real nested chat
runner.
- Routing, planner and profiling tests: 100 passed, including 69 routing
cases.
- `actionlint` passed for both changed workflows. `git diff --check`
passed.
- Confirmed protected master still requires CODEOWNER review. A live
lookup found four CI owners, with three of six numeric roster entries
eligible and three denied by the new owner check.
- `pnpm -r typecheck` and `pnpm build` passed. The full local Vitest
suite was stopped after repeated embedded PostgreSQL initialization
failures; it did not pass. On final revision
`0b40ae15b7996603e405edd4157a5c337e0405c7`, both Linux qualification
jobs and all required CI gates passed. The main PR workflow completed
with 48 successful jobs and one intentional skip, including final
verification. [CI
run](https://github.com/paperclipai/paperclip/actions/runs/41126881716).
Greptile reviewed the final revision at 5/5 with no inline findings.
- Shard and workflow contracts: 44 passed. CI first caught an outdated
assertion that required the routing job to use AWS; it now requires
hosted authorization, and the policy job passes.
- A read-only live gate exercise preserved the existing merge-freshness
denial when master advanced beyond the available merge ref. It allocated
no runner and was not a successful admission proof.

## Risks

- The short metadata authorization job now depends on GitHub-hosted
queue capacity. This prevents a stale roster from allocating AWS before
current CODEOWNERS are checked. Authorized test and final verification
jobs still use AWS.
- Identity/API failures fall back to hosted CI. No caller can override
the trusted owner list with PR contents.
- Configuration dependencies still require conservative graph handling.
Existing setup dependency, opaque I/O, stale manifest and wrong-lane
tests remain in place.
- The runner group is restricted to selected repositories and selected
workflows. Its workflow allowlist was verified and narrowed through the
GitHub settings UI. Legacy pinned callers must update to the current
trusted workflow before using AWS; active PR runs used master
references. The current PR workflow authorization and evaluation
workflow authorizations remain in place.

## Model Used

- OpenAI Codex, based on GPT-6. The exact serving variant and context
limit are not exposed in this session. Used reasoning, repository
inspection, code execution and GitHub tools.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass — targeted suites passed;
the full local suite hit the PostgreSQL startup limitation documented
above, and full Linux CI passed
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-30 16:10:40 -05:00
DottaandPaperclip dbff3747b8 feat(server): persist run logs and provider traces in S3 (#18327)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Operators use run logs and restricted provider traces to inspect
agent work.
> - Local log and trace files depend on the web server's persistent
volume.
> - That dependency prevents overlapping volume-backed Railway
deployments.
> - This PR reuses the instance S3 store for batched log and trace
payloads with conditional publication.
> - Existing Postgres rows retain their contracts; native export
recovery reuses events already committed before Runner acknowledgement.
> - S3-configured servers automatically copy and verify retained history
before a later deployment cutover.

## Linked Issues or Issue Description

**Subsystem affected**

Server run logs, restricted provider traces, storage providers, and
migration tooling.

**Problem or motivation**

Replacing the web server and its disk must preserve committed log output
and retained traces. The current S3 mirror can repeatedly upload a
growing file. Moving those payloads into Postgres would add database
writes, WAL, replication, and backup work.

**Proposed solution**

Reuse the existing instance storage configuration, S3-compatible
provider and credential chain. Store new run logs under run-logs/ and
opted-in raw traces under provider-traces/, below the existing prefix.
Cloud keeps its existing bucket and bucket-scoped credentials per stack.
Add no new configuration switches. Store immutable payload segments and
bounded binary range indexes directly in S3. Publish each batch with an
ETag-conditional head. Keep existing database ownership and lifecycle
records. Recover canonical native exports from their existing validated
control event source, checkpointing export progress in S3. Add no new
payload writes to Postgres. Preserve local defaults and migrate settled
history with verified byte counts and digests.

**Alternatives considered**

Postgres payload chunks add control-plane load. Repeated whole-file
mirrors amplify transfer work. The first index prototype left superseded
index nodes; the final binary index keeps all normally published nodes
reachable.

**Roadmap alignment**

This is a storage prerequisite for replacing the main web/API server. It
does not enable deployment overlap, detach a volume, or change native
Runner protocol acknowledgements. The maintainer approved this
implementation scope. ROADMAP.md has no duplicate implementation item.

Related PR: #16770 improves the existing in-flight mirror. This PR
preserves that legacy backend and uses the existing instance S3 profile
for new journals.

## What Changed

- Automatically select S3 segments for new logs and opted-in traces when
instance file storage uses S3. Reuse bucket, endpoint, region, prefix,
path style and credentials. Remove separate backend switches. Keep
local-disk instances local.
- Share the existing storage configuration resolver with product files.
Preserve config-file settings, environment precedence and the existing
root prefix. Keep pre-existing run-log mirror settings for legacy
history.
- Add bounded buffering, conditional ownership fencing, immutable range
reads, stable byte offsets, and completion hashing.
- Dispatch all existing log consumers through the recorded backend.
Coalesce output progress writes and publish live log messages after
storage receipts.
- Recover interrupted canonical native exports from their existing
durable source. Exclude separate credential, cleanup, and reprojection
records. Replay missing callback ranges and deduplicate late delivery.
Repair settled archives after controller lease expiry. Bound shared
repair work and stop it when all readers cancel. Serve the published
prefix when best-effort repair fails.
- Add encrypted optional trace channels, replacement reads, durable
deletion tombstones, and deadline-driven local/external expiry cleanup
independently of heartbeat scheduling. Stream historical source and
remote verification. Propagate worker cancellation through trace open,
conditional-write probing, upload, restore and reads. Fence deletion
even before the first object head exists; abort and drain owned
captures.
- Retry transient storage errors, distinguish 409 from failed
preconditions, and backpressure bounded log admission. Track interrupted
trace imports explicitly so ordinary local deletion stays independent of
S3.
- Automatically migrate retained history through the existing delivery
coordinator. Process one log and one trace per batch. Retry unresolved
history with backoff and stop scans after completion. Keep the
inventory/import command as optional diagnosis and repair. Verify source
and remote bytes before switching references. Verify finalized native
size and digest before setting its export cursor. Require ordered source
coverage when completeness metadata is missing. Preserve original trace
expiry. Block active, missing, corrupt, and unproven sources.
- Preserve identity and run-secret redaction in live and recovered
native logs. Register runtime log redaction secrets once through the
existing encrypted registry. Keep agent private keys in their existing
owner.
- Add storage, migration, retention, UTF-8, and route-privacy coverage,
plus operating documentation and qualification tooling.
- Add no schema, payload table, per-record SQL, production dependency,
or lockfile change.

## Verification

- Final fixes at `b3a44c898e` passed all 116 selected startup,
retention, attribution and cancellation controls. The disabled-scheduler
cleanup and concurrent-repair defects reproduced red before the fixes. A
timed-out repair still prevents later storage reads.
- The merged source passed 124 storage and real-Postgres Cloud
configuration tests. These include automatic history migration, existing
environment/file vault keys, source-directory removal, five real-SDK
stalled-request cancellation cases, shared capability-probe cancellation
and multi-chunk trace ordering. Saved Cloud S3 settings work after the
legacy config file is gone.
- Workspace typecheck and full build passed at the merged parent
`19f702d780`. Server typecheck and build passed again at `b3a44c898e`.
- Actual app acceptance: finish a process-agent run through the normal
API, stage its retained local-file input, then restart. Automatic
migration reports one migrated item and zero blockers. Remove the
original web home and restart at `b3a44c898e` with an empty home, the
existing S3 profile and the existing vault key file. The normal log API
preserves all five producer lines and exactly 788 bytes, with SHA-256
`74d9ae469da28bfe89b9b50a0e132aec24fe9e6d686496ed5e4ffa6167151036`. No
log-specific storage settings are present.
- Actual expiry acceptance: with heartbeat scheduling disabled, a trace
remains unexpired after startup and later reaches its fixture deadline.
The worker marks the row deleted and tombstones both S3 channel heads.
The retained run log stays byte-identical. The process fixture emits no
provider protocol frames, so nonempty encrypted payloads are qualified
separately through the real SDK round trips.
- Isolation tests use identical run identities in two stack buckets.
Cleanup in one existing prefix leaves another prefix, another company
and product files intact. Read-only Cloud source inspection confirms a
bucket and bucket-scoped credentials per stack. Four existing Cloud
storage environment-contract tests passed. No Cloud provisioning changed
and no new live vendor permission probe was performed.
- Earlier qualification passed 1,014 affected storage/native tests and
27 privacy-route tests with isolated Docker Postgres. An abrupt process
test commits 1,000 records, receives receipts, dies by SIGKILL and loses
its directory; another process reads every byte and continues. The real
Rust Runner experiment acknowledges 32 records while the export cursor
is zero, then continues the same Runner PID after controller loss. All
64 records export once with exactly 64 existing control rows. Repeated
snapshot/Stop commands completed in 162/81 ms.
- Emulator workload: 1,000 burst records used two batch PUTs. Eight
steady streams produced 240 records with 104 conditional PUTs and 72
GETs over 6.9 seconds. These are synthetic operation counts, not fleet
sizing or provider prices.
- Failure evidence is retained. Compact native events over 64 KiB,
missing file-key support, disabled-scheduler retention and repair
failure handling all reproduced before their fixes. Fixture repairs
addressed cold module setup, localhost/IPC permissions, the S3
bucket-name limit and a mode-0700 crash-test directory. Full local `pnpm
test:run` was stopped after host PostgreSQL semaphore exhaustion;
affected suites used isolated Docker databases instead. Native package
library symlinks were restored with the package's standard hydration
helper.
- The `19f702d780` browser session-recovery case timed out while saving
a task title. All eight browser shards passed on `b3a44c898e`, including
that case, with no UI behavior or assertion change. Fresh-head CI passed
at `b3a44c898e`: 55 successful checks, three skipped checks and one
neutral check. The branch is conflict-free.
- Map and module-boundary checks passed. Current-head Greptile is 5/5
with zero unresolved review threads.

Reproduce the opt-in storage suites with
`PAPERCLIP_LOG_TEST_S3_ENDPOINT` and a dedicated
`PAPERCLIP_RUN_EVIDENCE_MIGRATION_DATABASE_URL` ending in `_test`. See
`doc/run-evidence-storage.md` for operating limits, automatic migration,
optional diagnostics and rollout qualification.

## Risks

- Keep the existing per-stack bucket, prefix and vault key stable across
replacements. Relocating that storage is a separate whole-instance
operation.
- This release automatically changes new log storage for existing
S3-configured instances. Local-disk instances remain local. Canonical
native source replay is qualified with a deterministic real Runner;
actual remote execution and production-provider qualification remain
rollout gates. Generic server-only diagnostics and optional raw trace
tails without a surviving source can be incomplete after a crash. This
does not establish full zero-downtime deployment.
- Before deploying this release, qualify the actual S3 provider. It must
enforce conditional writes and pass read, version, deletion, workload,
and latency qualification. A capability probe rejects providers which
ignore preconditions. Moto is emulator evidence only.
- Dirty output is bounded and unconfirmed until S3 publication. Storage
failure leaves persistence incomplete while task results and usage can
settle.
- Trace expiry is not yet represented by Cloud's external wake contract.
Outstanding trace deadlines conservatively block sleep.
- Automatic history copying requires the original source volume. Keep it
until all retained resources pass verified import and clean-filesystem
reads. Stop old binaries from creating new local-file runs. Missing or
corrupt history remains blocked and visible in server logs. Rollback
requires a compatible reader against the same external state. Ordinary
object deletion does not erase retained historical object versions or
backups.

## Model Used

OpenAI Codex, `gpt-6.1-sol`, with reasoning, tool use, code execution,
and browser verification. The runtime did not expose a context-window
size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-30 15:17:35 -05:00
DottaandPaperclip 3b84c89885 fix(ci): use complete merge diffs and allow audited documentation (#18362)
## Thinking Path

> - Paperclip manages AI agents and needs reliable checks for each
contribution.
> - CI selects affected suites and then affected Vitest files before
allocating runners.
> - Recent runs compared a tested merge against a stale event base.
> - That included unrelated master changes and sometimes reached the
compare API file cap.
> - Ordinary documentation also forced every suite and invalidated test
caches.
> - This PR reads complete merge trees and exempts a small set of
audited prose inputs.
> - Tests retain conservative coverage when the diff or an input is
uncertain.

## Linked Issues or Issue Description

Refs #18348 and #18214. This is a follow-up to the merged affected-test
selector.
Related CI performance work: #16513 and #16500 address setup and suite
execution. This PR changes diff collection and input classification.

## What Changed

- Fetch the exact tested merge and its parents into a temporary bare
repository. Read the complete tree diff against the actual first parent.
Validate the second parent against the event PR head. Never execute PR
code in the routing job.
- Carry the immutable base, merge and PR-head identities into the plan.
Validate the same complete diff again before file selection.
- Use one prose policy across the planner, Vitest selector and task
cache adapter. Exempt only `doc/DEVELOPING.md`, `doc/DATABASE.md`, and
Markdown under `doc/plans/`.
- Keep the uncached typecheck and CLI guidance guard for the first two
documents. Keep policy checks for historical plans. Keep existing
coverage for all other docs, runtime skills, fixtures and unknown
inputs.
- Extend candidate-workflow qualification to exercise mixed source and
prose changes.

## Verification

- Passed: 15 planner and Git routing tests, including a 353-file diff,
stale base, rename, deletion, wrong parent and fetch-failure cases.
- Passed: 83 routing, Vitest graph, exact selection, workflow and real
Turbo cache checks.
- Passed: `pnpm -r typecheck` and `pnpm build`.
- Full local `pnpm test:run` was attempted and stopped after repeated
embedded PostgreSQL startup failures in native-session and Muse tests.
It did not pass or complete. The exact cause remains unverified. The
changed files do not include those tests or their database setup. Linux
CI results are recorded below.
- Passed: real mixed Inbox/source/prose graph qualification selected
699/911 workspace test files, preserving the source-only selection.
- Passed: both GitHub CI qualification jobs, including real mixed
source/prose Vitest selection. Greptile reviewed commit `10ac6f5ec9` at
5/5 with no findings.
- First full CI attempt: the [chat
shard](https://github.com/paperclipai/paperclip/actions/runs/41111003419/job/124253342684)
received a runner shutdown signal. The [Runner
shard](https://github.com/paperclipai/paperclip/actions/runs/41111003419/job/124253341271)
failed the unchanged Antigravity authentication success assertion. All
11 cases in that file passed when run directly. That Runner lane does
not use the changed selector/cache path. The exact assertion-failure
cause remains unverified. The chat shard passed on the one retry. The
authentication assertion also passed on retry, but the same Runner shard
failed a different unchanged test:
`native-distribution-integrity.test.ts:242`, "retains spawned native
bytes until the exact child exits", exceeded 5000ms. The [retry
log](https://github.com/paperclipai/paperclip/actions/runs/41111003419/job/124259174201)
preserves the failure. The Runner shard and required verify aggregate
are still red; all other checks passed. All 33 native-distribution tests
then passed in a direct local run. This shows recovery in isolation, not
the cause of the Linux timeout. No further blind reruns were issued.
- Replayed 15 real recent PR merge commits through a blob-filtered bare
fetch. Nine needed a corrected base. The four API comparisons that
returned 300 filenames became complete diffs of 3, 57, 66 and 54 files.
The 3-file case (#18326) becomes eligible for graph selection. Most
other samples still correctly use full CI because they include inputs
outside this narrow prose policy.
- Cache proof: prose edits preserve a product-test cache hit; changing
runtime API documentation invalidates it.

## Risks

- Prose exceptions must be removed or revised if product code starts
reading those files. The allowlist is deliberately small. Runtime docs
and skills remain covered.
- A network or Git failure keeps the full-suite fallback. Unexpected
merge topology also keeps full CI. Stack and force-full policies remain
in place.
- This does not claim an end-to-end speedup yet. Many mixed-content PRs
still require full CI. The routing fetch reads only shallow commit/tree
objects; it does not check out or execute PR files.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, repository tools and code
execution. The exact served model ID and context-window size are not
exposed to this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-30 14:29:39 -05:00
DottaandPaperclip 8f822bfcf7 fix(cloud): persist configuration and load release-image packages (#18335)
Land the approved Cloud configuration and release-image package stack.

Includes the separately reviewed adapter settings (#18335), external adapters (#18333), bundled plugins (#18336), startup configuration (#18339), and migration/package checks (#18341).

Includes the final image-owned loader and linked-dependency inventory corrections.

Verified stack head: 462716170d.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-30 19:21:33 +00:00
DottaandPaperclip 52e846f2f3 perf(ci): select affected Vitest files before allocating test runners (#18348)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Its CI must catch regressions without running unrelated work on
every pull request.
> - The existing task planner selects package lanes, but each selected
lane still runs all its test files.
> - Vitest can find related imports, but that graph misses tests that
read files or launch processes.
> - This pull request combines the real Vitest graph with conservative
dependency checks before CI allocates test runners.
> - The result runs fewer test files and can allocate fewer jobs while
retaining tests with unknown dependencies.

## Linked Issues or Issue Description

Refs #18214. The repository and PR search found no duplicate
file-selection implementation.

**What existing behavior does this improve?**

The general and serialized Vitest lanes in pull request CI.

**Current behavior**

An affected package schedules its complete test lane and its fixed shard
count.

**Proposed behavior**

For source-only diffs, select related tests plus conservative
filesystem, process, network and opaque consumers. Repartition those
files within their existing lane owners. Keep the complete original plan
when selection cannot be trusted.

**Reason and benefit**

Avoid unrelated test execution and allocate fewer runners when the
selected workload fits fewer existing job budgets. Report file counts
and job counts separately.

**Breaking changes**

No product or API changes. The set of PR test files and jobs changes for
eligible diffs. Full CI and the kill switch retain the original
coverage.

## What Changed

- Add a separate selection job on the gate-approved test fleet. The
metadata gate does not load PR code.
- Inspect real Vitest/Vite dependency edges. Retain opaque consumers and
unchanged downstream projects. Respect only complete local mock
factories. Reject unknown setup dependencies and source mutations during
dependency setup.
- Declare `oxc-parser` directly for AST inspection. This exact version
is already a transitive dependency in the checked-in lockfile; the
direct declaration avoids relying on pnpm's internal dependency layout.
- Produce a merge-SHA-bound manifest with exact lane ownership and
duration-aware partitions. Preserve serialized execution, chat shards
and native Runner ownership.
- Execute exact Vitest test specifications. Positional substring filters
cannot accidentally run a similarly named file from another shard.
- Use the original matrix if selection fails or times out. Fail selected
jobs if their published artifact is missing or invalid.
- Save the uploaded artifact ID in the executable plan. Failed-job
retries reuse that artifact even when GitHub increments the attempt
number.
- Hash selected assignments into Turbo cache inputs. A subset cannot
satisfy a full run or another subset.
- Add graph, workflow, real-runner and real-Turbo qualification. The
regression fixture proves a filesystem contract fails even when raw
Vitest selection misses it.
- Document selection limits, audit artifacts and
`CI_VITEST_SELECTION=off`.

## Verification

- All 138 affected routing, sharding, workflow, manifest, real Vitest
and real Turbo checks passed under Node 24 on the final implementation.
Additional release workflow checks passed. Cases cover opaque setup,
remocking, generated inputs, Node's builtin loader, artifact retries,
and exact execution of similarly named files.
- Repository-wide `pnpm -r typecheck` and `pnpm build` passed before the
clean rebase onto current master. The full remote typecheck and build
are required on the current head.
- `actionlint` passed for both changed workflows. `git diff --check`
passed.
- The Linux qualification run passed and selected 699 of 911 workspace
test files for an Inbox change. UI graph construction took 16.1 seconds.
This still uses two jobs. Synthetic partition coverage proves a
15-of-120 selection uses two of twelve jobs without dropping or
duplicating files.
- Both selected workspace shards passed locally. After tightening
execution to exact specifications, the real colliding UI test ran as
exactly one file with two passing assertions; the real server auth
middleware test ran as exactly one file with 28 passing assertions.
- The server probe selected 1,158 of 1,260 general files and 161 of 163
serialized files for an auth middleware change. Those conservative
selections retain 12 general and nine serialized jobs. The server's
temporary-home setup exception is pinned to reviewed content hashes;
changed setup fails closed.
- Full `pnpm test:run` has not been run locally. The full PR test matrix
is required because this change modifies global CI inputs. Final-head CI
is pending at runner allocation, and both qualification jobs are queued.
Other recent repository workflows are also queued. Superseded runs of
this PR were cancelled; this PR remains in draft until the required
checks execute.
- Greptile reviewed final commit
`31b484fc5b412da245cffb52a8ac8977228c5651` at 5/5 with no unresolved
findings. The earlier qualification run passed; it does not replace
checks on the final commit.

## Risks

- Dependency analysis adds setup and graph time. Fewer files do not
guarantee a shorter critical path. CI summaries expose the actual file
and job counts.
- Static dependency graphs cannot describe all runtime inputs. Unknown
inputs retain tests or use the original plan. The pure-package allowlist
requires conservative review.
- The trusted workflow runs from master. This PR exercises the new
selector in the qualification workflow; ordinary PR selection starts
after merge. Set `CI_VITEST_SELECTION=off`, use `full-ci`, or select
full/shadow mode to disable narrowing.
- The lockfile remains managed by the existing repository actions and is
not changed here.

## Model Used

OpenAI Codex, based on GPT-6, with repository tools and code execution.
The exact serving model ID and context window are not exposed in this
session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-30 13:16:29 -05:00
Nicky LeachandClaude Opus 5.5 abc270ee4c fix(runner): attest upstream releases and bind ACPX uniformly for every harness (#18325)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Native ACPX runs admit a provider only when its saved profile and
`commandDigest` match the current profile exactly.
> - For Copilot, Grok and Pi, `commandDigest` hashed dozens of Paperclip
source files. Claude, Codex, Cursor and Antigravity hash only their
upstream release.
> - Any change to a bound source therefore advanced these profiles.
#18212 alone moved Copilot from v88 to v91 and Grok from v15 to v19.
Each bump reset in-flight sessions and added immutable identity fixtures
(about 160 on master).
> - #18237 added the provider pack `contractDigest`, which now guards
Runner source compatibility at the pack boundary.
> - This pull request changes the Copilot, Grok and Pi digests to
upstream release attestations, as the other providers already use.
> - It also binds the shared ACPX layer the same way for every ACPX
harness: the profile's `acpxVersion` and the pack `contractDigest`,
which now covers the Runner's ACPX patch.
> - The benefit is that Runner source changes no longer reset these
sessions or need new profile versions and fixtures.

## Linked Issues or Issue Description

Refs #18237, #18212, #17972.

**What happened?**

A Runner change that touched a bound source file changed the Copilot,
Grok or Pi `commandDigest`. The author had to advance the profile
version, regenerate an identity fixture and keep every old fixture. On
deploy, saved sessions for that provider failed the exact admission
check and started fresh.

**Expected behavior**

A provider's `commandDigest` changes only when its upstream release
changes: an upstream version, a platform closure, the ACPX patch or the
Grok launcher. Runner source compatibility is the job of the pack
`contractDigest`.

**Steps to reproduce**

1. On master, change a comment in `src/drivers/acpx/runtime-host.ts`.
2. Run `node packages/paperclip-runner/scripts/grok-profile-identity.mjs
--check`.
3. The check fails. The Grok profile must advance, and the next deploy
resets Grok sessions.

## What Changed

- Add `packages/paperclip-runner/scripts/acpx-release-attestations.mjs`.
It computes the release attestation for each provider:
- Copilot and Pi: a canonical-JSON hash of the profile version, upstream
package versions and the platform closure pins (Pi also binds its Node
version).
- Grok: the SHA-256 of `launcher.cjs`. Admission already hashes these
bytes.
- The attestation binds no Paperclip source, shared ACPX layer, absolute
path, pack manifest digest or install layout.
- Bind the shared ACPX layer once for every ACPX harness (Claude, Codex,
Copilot, Cursor, Grok, Pi, Antigravity):
- Add the Runner's ACPX patch (`patches/acpx@<runner acpx
version>.patch`) to the pack `contractDigest`. A patch change now
retires older image packs for every harness. Other packages' ACPX
patches are not read. A build context without the Runner's patch fails.
- Remove the ACPX patch hash from Cursor's release declaration
(`cursor-contract.json`) and advance Cursor once to profile 17. Copilot,
Pi and Cursor no longer bind ACPX in their own digests, like Claude,
Codex, Grok and Antigravity.
- Saved inputs for every harness already must match the current
`acpxVersion`.
  - Claude and Codex digests do not change.
- `generate-acpx-profiles.mjs` writes these digests to
`acpx-profiles.json`. `check:acpx-profiles` refuses a stale digest.
- Move the Copilot closure pins to `copilot-closure-pins.ts`, so that
the generator can import them. `copilot-installation.ts` re-exports
them.
- Advance each profile once and then freeze it: Copilot 92, Grok 20, Pi
37. A version change at the switch keeps the rollout on the same path as
every earlier profile bump.
- Replace the historical version lists in `profile-compatibility.ts`
with a range. Every revision from 1 through the current one decodes.
Claude and Codex still decode revisions 1 through 5. Launch and recovery
admission still require the exact current profile and digest.
- Delete:
- `scripts/copilot-profile-identity.mjs`,
`scripts/grok-profile-identity.mjs` and its test
  - the Grok launcher source stamp
- 159 Copilot, Grok and Pi identity fixtures, including three
unreferenced `copilot-mainline-v*` fixtures. The Cursor fixtures stay.
- Rewrite the affected tests as behaviour checks:
- Each provider admits only the exact current profile. Every earlier
version decodes and is refused at admission.
- The last source-bound digests, and a changed digest at the current
version, are refused by recovery and by the backend factory.
- The Rust Pi descriptor test uses the generated profile instead of
fixtures.
- New `acpx-release-attestations.test.mjs`: a relocated copy of the
inputs gives the same digests, each upstream input changes only its own
providers, and the generator refreshes and checks the manifest.
- Remove the fixture exceptions from `.dockerignore`. Add the
attestation script and the generator to the Daytona image content
inputs.
- Update the Pi install probe and the Rust integration constant for the
new Pi digest.
- Update the docs to describe the current attestation model:
`doc/grok-native-runner.md`, `doc/RUNNER-INTEGRATION-PLAYBOOK.md`,
`doc/observability.md`,
`packages/paperclip-runner/docs/durable-recovery.md`, and the Copilot,
Pi and rich ACP architecture reports. Each report now opens with the
current profile identity; earlier source-bound profiles remain as dated
chronology. No doc references a deleted file.

## Verification

- In `packages/paperclip-runner`:
- `node --test scripts/acpx-release-attestations.test.mjs
scripts/contracts/contract-fingerprints.test.mjs`: 19 tests pass,
including a Runner ACPX patch edit that changes the contract digest,
other patch edits (including `acpx@0.12.0` for `adapter-utils`) that do
not, and a build context without the patch that fails.
  - `node scripts/generate-acpx-profiles.mjs --check` passes.
- `vitest run src/drivers/acpx src/backends src/contracts`: 1647 tests
pass, 9 skipped.
  - `tsc -p tsconfig.json --noEmit` passes.
- From the repository root, `vitest run --config
tests/runner-e2e/vitest.config.ts
tests/runner-e2e/daytona-image.test.ts`: 11 tests pass.
- In `server`, the 8 test files that use ACPX profiles, pack digests or
`contractDigest`: 1617 tests pass.
- Not run locally: the Rust tests and `cargo fmt`, because this machine
has no Rust toolchain. CI runs them.
- Before this change, a synthetic upgrade check built two Runner
revisions that differ only in shared source. A Claude checkpoint saved
under the first revision rebinds under the second, and a changed Claude
`commandDigest` starts fresh. This confirms that the provider JSON has
no other build-dependent field.

## Risks

- **One reset at rollout.** The Copilot, Grok, Pi and Cursor digests and
versions change once. Saved sessions for these providers start fresh on
their next run, as after any earlier profile bump. After this change,
Runner source changes no longer cause this reset.
- **Lost "source changed, so requalify" signal.** The old digest forced
a new profile version when bound source changed. Nothing enforced
requalification: Copilot was last qualified at v47. Pack-boundary
contract changes are now caught by the pack `contractDigest`.
- **Image packs are retired once for every provider.** Adding the ACPX
patch changes the pack `contractDigest`, so the controller uploads its
bundled pack (about 16 s per remote start) until images are refreshed.
Claude and Codex sessions are not reset: their digests and versions do
not change.
- **Grok launcher and closure pins.** The Grok digest covers only the
launcher bytes. Grok's runtime version is still checked separately at
admission, as before.
- **Grok digest equals early Grok profiles.** The launcher bytes have
not changed since profile 1, so the new Grok digest equals the published
profile 1 digest. The profile version still separates them: launch,
recovery and the backend factory require profile 20. An image pack from
that period has no `contractDigest`, so the pack gate refuses it.
`remote-provider-pack-verification.test.ts` now covers this case.
- **Docker context checks** run `generate-acpx-profiles.mjs --check`,
which now imports `.ts` pin files through Node type stripping.
`materialize-pi-distribution.mjs` already relies on this on Node 24.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`) in Claude Code, with tool use
(shell, file edits, local test runs).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-10-30 09:10:50 -07:00
Nicky LeachandClaude Opus 5.5 fa760dbce4 fix(runner): reuse image packs only with matching contract digest (#18237)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Remote native runs use a provider pack. The controller reuses a
protected pack from the sandbox image when the pack is compatible.
> - #17749 gates this reuse on a hand-maintained interface revision in
`provider-pack-contract.json`.
> - Later changes altered the runner/pack boundary (#17922, #18188), but
nobody bumped the revision. A stale Claude or Codex image pack can still
be reused across a sidecar contract change. This is the failure class of
#17972.
> - A manual revision has a "forgot to bump" failure mode. Source-byte
hashes change on every refactor, so they are too brittle.
> - This pull request declares the sidecar `session.open` contract in
its JSON schema and computes a contract digest from the JSON contracts
and Rust shapes.
> - Image-pack reuse now requires an equal digest.
> - The benefit is that an incidental change keeps image packs reusable,
and a real contract change retires them automatically.

## Linked Issues or Issue Description

Refs #17749, #17972, #17922, #18188.

**What happened?**

The controller reused an image provider pack when `compatibility.acpx`
and the selected agent's profile digest matched. For Claude and Codex,
that profile digest binds only the upstream executable. The ACPX
interface revision stayed at 1 after later sidecar contract changes. A
pack built before those changes passed the reuse check.

**Expected behavior**

The controller reuses an image pack only when the pack uses the same
runner/pack contracts as the controller's bundled pack. Comments,
formatting and refactors do not change that result.

**Steps to reproduce**

1. Build an image pack from a commit before a sidecar input change, such
as a new `session.open` field.
2. Run a controller from a later commit that sends the new field, with
the same interface revision and Claude version.
3. Before this fix, `verifyRemoteProviderPack` accepts the old image
pack.

## What Changed

- Declare the sidecar `session.open` parameter set as a closed
`sessionOpenParams` definition in `acpx-sidecar.schema.json`.
- `generate-acpx-sidecar-contract.mjs` now generates
`GENERATED_ACPX_SIDECAR_OPEN_PARAMS` from it.
- `parseOpenParams` uses the generated list instead of an inline `Set`.
The accepted set is unchanged.
- This is the surface of #17972. The schema is now its source of truth.
- Declare the nested `session.open` contracts that the sidecar parses
strictly:
- `protocol/provider-schemas/runtime-context.schema.json` closes every
runtime context object. `parseNativeRuntimeContext` uses the field lists
that `scripts/generate-runtime-context-contract.mjs` generates from it.
- The sidecar schema declares the closed `providerPolicy` object, and
`parseProviderPolicy` uses its generated field list.
  - The accepted fields do not change.
- Add
`packages/paperclip-runner/scripts/contracts/contract-fingerprints.mjs`.
It fingerprints these contracts:
  - the PRP and sidecar JSON schemas, with annotation text removed
  - the generated catalogs in `generated/`
- the Rust serde shapes, `json!` payload keys, match literals and env
keys in `runner-core/src`, without test-only modules
  - the reserved env key lists in `configured_environment.rs`
- Read only the trees that every pack build context contains. Fail when
a registered source is missing, so two build contexts cannot silently
produce different digests.
- Use only Node built-ins. The registry adds no dependency.
- Write `contractDigest` as a top-level payload field in
`build-provider-pack.mjs`. The manifest digest algorithm and the
existing field layout do not change.
- Require an equal `contractDigest` for image-pack reuse in
`remote-provider-pack-verification.ts`. A pack without a digest is not
reused. The controller uploads its bundled pack, as it does today for
any incompatible pack.
- Re-attest the source-hashed profiles, because this PR changes their
bound sidecar sources:
- Grok becomes profile 15 and now also binds the generated allowlist, so
a Grok field change in the schema still invalidates the Grok identity.
- Copilot becomes profile 88, and also binds the generated runtime
context fields.
  - Earlier profiles stay decodable.
- Add the registry script and `generated/` to the Daytona image content
inputs.
- Document the digest and the schema-first rule in
`docker/daytona-runner/README.md` and `doc/DEVELOPING.md`.

## Verification

- `node --test scripts/contracts/contract-fingerprints.test.mjs` (in
`packages/paperclip-runner`): 4 tests pass.
  - These changes keep the digest:
    - schema description text
    - schema reformatting
    - renaming `parseOpenParams`
    - Rust comments, `#[serde(skip)]` fields and `#[cfg(test)]` modules
- edits to the `#[path]` test module `tests/provider_api_validation.rs`
  - These changes alter the digest:
    - a new `session.open` schema field
    - a changed constraint on the `remainingWork[].description` property
    - a new reserved env key
    - a new sidecar env key
    - a new checkpoint field
  - A build context without a registered source fails.
- `node --test test/acpx-sidecar-contract.test.mjs`: 13 tests pass. A
new case rejects an unknown `session.open` parameter and accepts each
declared parameter.
- `node --test scripts/grok-profile-identity.test.mjs`: 4 tests pass. A
change to the Grok field in the generated allowlist invalidates the Grok
identity.
- `generate-acpx-profiles.mjs --check`,
`generate-acpx-sidecar-contract.mjs --check` and
`generate-protocol-manifest.mjs --check` pass.
- Runner vitest suites pass: 470 passed, 1 skipped. They cover the
sidecar, sidecar input and protocol, Copilot and Pi installation,
profile compatibility, native execution, recovery identity, the backend
factory and the environment.
- Server tests: pack verification, executor and artifact preparation
pass (1,004 tests).
- `tsc --noEmit` passes for `packages/paperclip-runner` and `server`.
- `tests/runner-e2e/daytona-image.test.ts`: 10 of 11 tests pass. The
failing test also fails on `master`. It expects a literal
`profile-v19-identity.json` line in `.dockerignore`, which uses a
`profile-v*` glob.
- Not run locally:
- A complete `build-provider-pack.mjs` run. The builder rejects the
local Homebrew Node because it is not portable after relocation.
- Rust tests and `acpx-controller-recovery.test.ts`, because `cargo` is
not installed.
  - The full `pnpm -r typecheck`, `pnpm test:run` and `pnpm build`.

## Risks

- Only JSON contracts and Rust shapes are part of the digest. The
remaining TypeScript-only definitions are the `paperclip_finish` and
`paperclip_block` tool schemas in `completion-result.ts` and the
TypeScript env key lists. They are not covered until they move into a
schema. The nested `expectedIdentity` and `tools` values ignore unknown
fields, so a change there cannot cause a startup rejection.
- A change there can let a stale image pack be reused. The sidecar then
rejects the input with its strict parser error.
  - Today, Claude and Codex image packs have no contract check at all.
- The digest covers all registered contracts for the whole pack. A
contract change for one provider kind also retires image packs for the
other. Each replacement costs about 16 s per remote start until the
image is refreshed.
- Existing image packs have no digest. After deploy, the controller
uploads its bundled pack until the image is rebuilt.
- The Grok and Copilot re-attestations start fresh sessions for those
agents once after deploy, as each profile bump does today.
- The Daytona image content ID formula changes, so the next image build
does not reuse a cached image.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

Anthropic Claude Opus 5.5 (`claude-opus-5-5`) through Claude Code in the
desktop app, with repository tools, shell execution and research
subagents. The session does not expose the context window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [ ] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-10-29 22:55:11 -07:00
DottaandPaperclip 99ec767a42 Fix forced CI execution and align OpenCode shell fixture (#18230)
Use one explicit Turbo cache mode for forced CI execution and preserve cache trust boundaries. Match OpenCode’s ignored stdin in the relocated Linux shell-hook fixture while retaining strict OOM and parent-isolation assertions.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-29 18:19:11 -05:00
DottaandPaperclip f5dcc505c0 perf(ci): select affected suites and cache task results (#18214)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Pull request CI checks the server, UI, packages, Runner, and release
paths.
> - An ordinary PR starts 48 jobs even when its diff affects only a
small part of the repository.
> - Repeated pushes also repeat successful tests with unchanged inputs.
> - This PR selects affected suites before runner allocation and caches
deterministic task results with Turbo.
> - Required checks validate the plan. Unknown inputs and failed
comparisons keep full verification.
> - The benefit is fewer runner jobs and less repeated work, with full
post-merge verification retained.

## Linked Issues or Issue Description

**What existing behavior does this improve?**

The GitHub Actions PR workflow repeats unrelated suites for each push.

**Subsystem affected**

Cross-cutting CI routing, test execution, and required-check
aggregation.

**Current behavior**

An ordinary UI component change starts the complete 48-job PR workflow.
Existing dependency and compiler caches do not reuse successful test
results.

**Proposed behavior**

A trusted planner reads the tested merge diff and task inputs. A UI
component change such as `ui/src/components/Sidebar.tsx` selects 18
jobs, including build and browser coverage. Successful general,
serialized, and standalone Rust tasks can reuse unchanged results across
pushes in the same PR.

**Reason and benefit**

Reduce unrelated jobs and repeated test execution. The 48-to-18
comparison measures planned job count. Remote wall-clock savings have
not yet been measured.

**Breaking changes**

No application API changes. Required `verify` and `e2e` names remain
stable. `verify` also checks serialized suites and the canary dry run.

## What Changed

- Added explicit task inputs and a pinned Turbo version. An execution
adapter calls existing package scripts without adding script aliases.
- Added trusted diff planning and dynamic matrices with complete
fallback matrices.
- Added PR-scoped task result caches. External-state and
revision-stamped checks remain uncached.
- Added and created the `full-ci` override label, plus repository modes
`enabled`, `shadow`, and `full`. Forced and shadow runs bypass result
caches.
- Added candidate-workflow qualification, planner and aggregate tests,
and a real Turbo cache fixture.
- Kept the repository-wide CLI guidance guard in the uncached typecheck
lane so UI-only diffs retain this security check.
- Documented rollout controls, input maintenance, and local inspection
commands.

## Verification

- Passed 537 focused CI policy, routing, matrix, cache, and shard tests,
plus 146 existing release workflow tests.
- Passed actionlint for all four changed or added workflows and `git
diff --check`.
- Passed `pnpm -r typecheck` and `pnpm build` on the implementation
base.
- Checked real repository task plans for existing general-test and
native Rust commands. A real server partition passed, then restored from
cache: Turbo task time was 20.022 seconds for execution and 151 ms for
the cache hit, excluding wrapper/setup overhead.
- The real Turbo fixture exercises the execution adapter and proves
source, argument, toolchain-scope, and environment invalidation, result
restoration, and retry of failed tasks.
- Stopped the serial local `pnpm test:run` after over 30 minutes in
favor of the complete parallel GitHub suite. A local parallel
database-lane attempt had PostgreSQL startup errors and timeouts. The
direct migration fixture passed, then all 273 database tests passed with
one local worker. This recovery does not establish the exact cause of
the earlier startup failures. The full GitHub PR suite and candidate
qualification passed on commit
`0bf07ae071c9fe7903edc604d44b5a175727fed0`. Greptile is 5/5 with no
unresolved review threads.
- All 40 CLI guidance safety tests passed with the exact uncached
workflow command.
- Verified that master rulesets require only `ci / verify` and `ci /
e2e`; both names remain unchanged.
- Trusted workflows load from master. The added GitHub-hosted
qualification workflow exercises this candidate planner before merge.

## Risks

- Changes to global inputs, including task definitions and execution
helpers, force execution and disable cache restore/save for the full PR
diff. Missing a cross-package filesystem read could omit a suite. Inputs
include known server reads of UI files and shared tests of UI assets.
Unknown paths, malformed or truncated diffs, and definition download
failures select all suites.
- Task result reuse requires complete inputs. Keys include Git source
files, scripts, resolved dependencies, environment, toolchain, checkout
path, and unclassified source files. Generated build artifacts are
excluded from input hashes. Registry smoke, browser, and
revision-stamped tasks remain uncached.
- Maintainers must update task inputs when suites start reading new
paths. `shadow` reports selection while running all work. `full` and
`full-ci` disable selection and result reuse.
- The implementation becomes active after merge. Full post-merge
verification remains unchanged.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, repository inspection, tool
use, and code execution. The session does not expose a verifiable exact
runtime model ID or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 16:56:28 -05:00
DottaandPaperclip 09c05c5505 feat(runner): provision pinned Google Antigravity native runtime (#18187)
## Thinking Path

> - Paperclip manages agents and their work.
> - Native Runner providers need verified executables before they can
run.
> - Google Antigravity ships a native ACP server and a helper
executable.
> - An archive hash alone does not verify the installed runtime or its
child process cleanup.
> - This pull request adds a pinned installer and a small, verified
compatibility patch.
> - Later pull requests add Runner execution, account setup, and the
recorded user journey eval.

## Linked Issues or Issue Description

Refs: #12503, #14938. Those pull requests use the legacy CLI adapter.
This stack adds native Runner ACP support.

**Agent or provider**

Google Antigravity ACP 1.4.3.

**Why this adapter is useful**

Users need a reproducible runtime before they can select Antigravity for
a Paperclip agent.

**How the agent is invoked**

The installer prepares the native ACP server and helper. This pull
request does not enable task execution. Default execution remains closed
pending qualification.

## What Changed

- Pin the complete macOS ARM64 runtime closure. Keep other platforms as
inventory only.
- Verify archive entries, installed bytes, ownership, and cache layout.
- Patch exact upstream code anchors for model admission, instruction
loading, native process ownership, and per-call file tool completion.
- Package a self-contained installer and expose `paperclipai runtime
setup antigravity`.
- Record candidate limitations and historical acceptance evidence.

## Verification

- Runtime provisioning, packaging, metadata, and patch support tests: 62
passed. The separate exact pinned native patch run passed all 5 tests
with no skips and no Google authentication.
- CLI runtime setup tests: 5 passed.
- Map contract check passed. Staged diff whitespace check passed.
- The first test command ran before dependency installation and failed
on missing esbuild. The same command passed after installation.
- Current master has a stale lockfile. Dependencies were resolved
locally with scripts disabled. The generated lockfile is excluded from
this pull request.

- Final head: required `ci / verify` and `ci / e2e` passed, and Greptile
is 5/5 with both review threads resolved. The optional external
Paperclip Review remains queued. Two original timing failures are
retained; one failed-job rerun passed without source or deadline
changes.

## Risks

- The patch depends on exact upstream native code. A new upstream
release must get a new verified closure.
- Only macOS ARM64 has a complete verified runtime. Installation does
not qualify authentication, task execution, or other platforms.
- The installer downloads official Google assets when the verified cache
is absent.

## Model Used

OpenAI Codex (GPT-6). The host did not expose the exact model revision
or context limit. The model used tools for code edits, test execution,
and review.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 13:25:54 -05:00
DottaandPaperclip f1911a4c53 perf(skills): move repository packages out of Postgres (#18082)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/205/changes/paperclip/205
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Agents receive selected company skills before each turn.
> - Imported skills can need files from the whole source repository.
> - The current path stores those files in Postgres and reads large JSON
payloads during preparation.
> - This pull request stores verified packages in the configured file or
object store and keeps preparation queries small.
> - It also converts old rows automatically and restores missing files
from the exact saved commit.
> - The result reduces database traffic while preserving skill versions
and repository dependencies.

## Linked Issues or Issue Description

**What existing behavior does this improve?**

Company skill import, version storage, and preparation before agent
turns.

**Current behavior**

Repository snapshot bodies live in JSONB. Skill preparation can read
those bodies again even when the files already exist on disk. Historical
packages and native assets also need a bounded cleanup path.

**Proposed behavior**

Store package archives and manifests through the existing storage
service. Keep version identities, receipts, hashes, and recovery
metadata in Postgres. Convert legacy rows after the stored package
passes read-back verification. A missing package can use legacy bytes or
its exact Git commit under current repository authorization. No separate
data-migration command is required.

**Reason and benefit**

The warm path sends no repository bodies through SQL and reads no object
bytes. Cleanup runs through the existing deadline coordinator. Current
versions, active runs, explicit pins, and authored content retain their
protection.

**Breaking changes**

The normal application schema upgrade is required. Single-version and
skill-file responses keep their existing shape. Version lists,
current-version summaries, and test-run version summaries now contain
file names and kinds without file bodies. Diff and restore fetch
selected versions through the existing single-version endpoint. Older
server builds must not write after conversion unless they support the
new package format. The storage override and rollback limits are
documented in `doc/skill-package-storage.md`.

**Additional context**

Related work: #15731 preserves repository dependencies; #17923 changes
version-cache scheduling; #18080 changes delivery to remote Codex homes.
This change owns package persistence, acquisition, and expiry. It does
not replace those delivery or scheduler changes.

## What Changed

- Add company-scoped archive receipts, exact-commit recovery recipes,
migration deadlines, and a durable object-deletion queue.
- Add bounded archive upload, read-back verification, extraction,
concurrent request coalescing, and verified local caches.
- Convert old snapshots and versions automatically. Keep legacy bytes
when verification fails.
- Recover missing files through current source authorization and the
original commit. Validate repository identity, file hashes, modes, and
the aggregate hash.
- Expire unused recoverable Git packages and native assets after 30
days. Preserve active pins and the durable copy of authored or unproven
content.
- Keep warm preparation queries metadata-only. Bound file digest caches
and avoid repeated body hashing when file identities are unchanged.
- Extend the existing storage contract with cancellation. Register
package work with the existing coordinator. Optional conversion retries
retain the original bytes and may wait for ingress without blocking
sleep.
- Add regression tests, operating guidance, a deep trace, benchmark
receipts, and an optional maintenance command.

## Verification

### Final master integration and review repair — October 29, 2026

Current head: `a6065424249e763dfeac37161f1b52a9f25bd9b7`. Commit
`f8bbdd3dbd` resolves the conflicts with master `76a796e964`; the final
two commits repair the Apex deletion findings below.

- Keep both package-maintenance and version-retention notifications in
their write transactions.
- Keep the shared run-pin predicate and master's controller-lease
deadline metadata. Package expiry reads the updated protected-version
result.
- Preserve every master migration entry. Generate migration **0415
(`0415_zippy_zemo.sql`)** after master's 0414. Its skill SQL is
byte-for-byte unchanged from the previously tested idempotent migration.
Retain only the five newest schema snapshots. Migration numbering and
safety checks pass.
- Repair failed file/folder deletion: preserve a complete temporary
subtree until transaction commit, restore on upload or SQL failure, and
restore callback failures before releasing the mutation lock. Both
PostgreSQL regressions reproduced missing files before the fix and now
pass. They cover binary data, executable permissions, empty folders,
unlisted files, unchanged database/version rows, successful retry after
upload-claim expiry, and historical reads.
- Reconcile lost commit replies under the same advisory and row locks.
Check the saved version and source identity before restoring. Keep
committed deletions intact and preserve backups when the database
outcome is unknown or a newer edit exists. Four real-PostgreSQL outcome
tests pass; the prior code failed three of them.
- Full workspace typecheck and production build pass on the final
commit. All **204** focused PostgreSQL package/cache/retention/authoring
and filesystem-boundary tests pass, with none skipped.
- Apex review **18 passes 5/5**, with zero new comments on the exact
final head. All **34** review conversations are resolved.
- [Final-head
CI](https://github.com/paperclipai/paperclip/actions/runs/40914116508)
completes successfully on attempt 2. The head has **55 successful
checks**, two neutral reports, two skipped checks, and a successful Snyk
status. No checks are pending or failing. All eight browser shards pass.
- Runner Vitest 2/2 timed out once in the unchanged ACPX
controller-replacement fixture. The same job passed on the preceding
commit. One unchanged CI retry passes all five ACPX recovery cases,
**2,253** Runner package cases and **126** native server integration
cases; their standard one and five skips remain. The initial timeout's
root cause is not established. Local diagnosis also hit the fixture's
eight-second session.open timeout with an authenticated Runner; no local
Runner pass is claimed.
- Both full local `pnpm test:run` attempts were stopped when Apex
identified deletion defects and source repair became necessary; neither
is claimed as a passing full local run. The final **204** focused tests,
full workspace typecheck, and production build pass. Full-suite
acceptance uses the final-head CI jobs. The superseded merge-head CI
included runners terminated by shutdown signals; each source repair
started a new full run.

- Auto-merge is enabled for squash merge. The final head is
conflict-free and all checks pass. GitHub's active master ruleset still
requires a code-owner approval for the dependency files. The existing
review requests are with `devinfoley`, `nickyleach`, and `forgottendev`;
no policy bypass was used.
- The earlier hosted stress and full native receipts below remain tied
to `a2e597d800`; they are not relabeled as a deployment of this final
integration. The earlier local PostgreSQL startup failure remains
recorded below; PostgreSQL ran successfully for this integration
verification.

### Full native skill execution — October 29, 2026

The full native-agent acceptance gap is closed on candidate
`a2e597d800eb989d565780e7aa947d5368676444`. Two qualifying native turns
used OpenAI API / `gpt-5.4-mini` in real Daytona sandboxes, on the same
disposable hosted TEST tenant as the stress test. A follow-up on the
same task consumed a newly saved skill version.

The task text asked for the assigned skill workflow. It did not contain
the proof nonce or expected receipt. The assigned authored skill
contained a Python verifier and a random package-local nonce. The agent
read the actual installed skill files and executed that verifier against
the imported, automatically converted 1,360-file repository package. It
checked the repository file count and reference/binary bytes, and
directly executed the repository's executable probe. Independent
verification matched the emitted JSON to the nonce and expected byte
hashes. The agent persisted the same receipt as its task response;
native finalization committed, workspace finalization succeeded, and
task state became Done.

| Qualifying turn | End-to-end run time | Recorded skills.prepare |
Repository files | Binary hex | Shell receipt SHA-256 |
|---|---:|---:|---:|---|---|
| Initial task | 47.881 s | 1822 ms | 1360 | `00ff07800a` |
`a1deb30dc095f2306c7aa9cc5ec396da12c68961cf5b809f4d7c20f7fc68493b` |
| Corrected follow-up, new nonce/version | 37.974 s | 377 ms | 1360 |
`00ff07800a` |
`dbcdc33fa1376b4edc136feae1cdf770560a73292467e93619efdda20e4282a7` |

Both successful shell receipts reported `probe: STRESS18082` and
`assetSha256:
e8ea7a2f15f7bb3b332a46adbef848465884c8996595aa234748befd544d1f3a`. Their
proof nonces, selected version IDs and receipt hashes differed, and both
ran on the same task. These are observed timings, not latency SLOs; they
include real provider work. The service stress-test timings remain a
separate measurement boundary.

Earlier failures remain in the evidence:

- The original five-minute Daytona allocation timeout never reached
model execution. After normal owned-stack restore, its durable cleanup
record was `expired` / `success`. The cause of that original allocation
timeout remains unknown; a later success establishes recovery only.
- Initial continuation setup used unsupported generic agent-update
fields and returned HTTP 409 before dispatch. Setup was corrected to use
the supported skill-assignment and versioned instruction commands.
- The intervening completed native turn read repository bytes and ran
the probe, but omitted the verifier JSON under the older test agent's
overly-specific instruction file. Its strict receipt validator failed;
it is not counted as a qualifying turn. Correcting the test agent's
instruction file and sending an explicit task-scoped wake produced the
qualifying follow-up above.
- The pinned application's immutable rate card omits `gpt-5.4-mini`, so
completed usage triggered the normal block-on-unpriced budget policy.
Supported append-only accounting corrections estimated the three
completed runs using the [official OpenAI model rate
card](https://developers.openai.com/api/docs/models/gpt-5.4-mini): $0.75
input, $0.075 cached input, $4.50 output per million tokens, assuming
standard processing. Estimates totaled 12.482655 cents. Original usage
and missing-price records are preserved; the $1 hard stop and
unpriced-usage guard stayed active.
- Model shell attempts included a missing `xxd` command and incorrect
guessed file paths. Those failed calls and subsequent successful actual
verifier calls remain visible in complete event streams. No
zero-tool-error claim is made.

No product source changed during this continuation. The previously
measured contention, cold-start and memory limits remain. The later
merge resolution is covered by the separate integration checks above;
these hosted receipts qualify their recorded candidate.


### Hosted stress test — October 29, 2026

**Hosted acceptance:** full native-agent execution and a changed-skill
follow-up pass on the recorded hosted candidate. The final integration
section above records the subsequent conflict resolution and its
separate checks.

Tested baseline `929e840595c8933ca485ac7a2e99413e1e11ca64` and this
exact candidate sequentially on one disposable TEST tenant, with
external Neon PostgreSQL and actual S3. The fixture contained **1,360
files / 22.4 MB / ten skills sharing one repository**. Measurements
cover deployed skill-preparation and native-context services in an
adjacent diagnostic process, not a complete agent turn. The container
had **24 vCPU / 24 GB**.

| Warm workload | Median before → after | p95 before → after | DB
returned value bytes/preparation before → after |
|---|---:|---:|---:|
| One skill, serial | 1,060 → 125 ms | 1,303 → 155 ms | 22,610,389 →
1,771 |
| One skill, four concurrent | 4,415 → 297 ms | 5,143 → 328 ms |
22,610,389 → 1,771 |
| Ten skills, serial | 5,723 → 535 ms | 6,057 → 600 ms | 224,739,030 →
10,671 |
| Ten skills, four concurrent | 24,410 → 1,986 ms | 24,833 → 2,221 ms |
224,739,030 → 10,671 |

- Candidate warm preparation performed **zero S3 GETs**. Ordinary-pool
queries fell from 16 to 9 for one skill and 61 to 9 for ten, excluding
dedicated lock connections. DB numbers measure returned values before
Drizzle decoding, not wire bytes. Baseline/candidate sample counts were
30/100, 32/100, 5/50 and 8/48 respectively; the small baseline ten-skill
samples are comparative evidence, not SLO estimates.
- **Application-UID soak:** 800 ten-skill preparations over 10.3
minutes, four workers paced by 2.5 seconds; **zero failures**, median
**559 ms**, p95 **775 ms**, p99 **910 ms**, zero warm S3 reads. All 726
accompanying health/company-list requests returned HTTP 200. Their
end-to-end p95 was 569/502 ms, including network latency. The probe
overlaps most of the soak. Soak DB-response capture was limited to its
first 60 seconds.
- **Important remaining costs:** an unpaced 16-way ten-skill burst had
p95 **8.32 seconds** because company-level preparation serializes. Cold
preparation took approximately **1.1–2.5 seconds** for one skill and
**7.4–10.0 seconds** for ten. Ten-skill diagnostic RSS remained about
**1.17 GiB** (baseline 1.18 GiB), and the soak peaked at **1.35 GiB**. A
concurrent whole-container sample was 3.45 GB. This does not establish
suitability for a small-memory host or eliminate per-entrypoint native
asset duplication.
- **Upgrade without a manual data migration passed:** legacy snapshot
JSON shrank from 22,465,691 bytes to `[]`, with a stored package and
zero pending conversions.
- **Recovery passed:** sixteen concurrent cold requests coalesced into
two S3 GETs; full bytes/binary/executable modes matched; same-size
corruption repaired; an injected storage failure preserved warm access
and failed cold access safely. A disabled public-Git source denied
recovery, and after the actual five-minute backoff its exact SHA
reconstructed all 229 files. Cross-company descriptor access was denied.
Private-Git credential revocation was not tested.
- **Retention passed:** reclaimed 27,754,496 allocated cache bytes,
deleted an unreferenced package row and both objects, preserved aged
authored history, and expired/reacquired reconstructible Git content. A
version pinned by the failed native run was correctly retained. Only
owned fixture timestamps were aged.
- **Browser UI passed:** authored skill creation, saved edit surviving
reload, version history, and restoration of earlier content.
- **Initial native attempt (superseded by the qualifying turns above):**
one real run failed at Daytona allocation after five minutes
(`setup_failed`), before any model execution. Provider cleanup also
reported failure. That attempt does not count as a passing native turn.
Its receipt and all evidence remain preserved; its cleanup later
recorded success after normal restoration.
- Initial A/B commands ran as SSH root. Diagnostic-owned lock/cache
permissions caused one setup HTTP 500 and the first UID-1000 soak to
fail; exact fixture paths were repaired. The final soak, retention and
recovery ran as application UID 1000. A fresh UID-1000 one-skill batch
also passed (30 samples, median 116 ms, p95 321 ms, 1,771 DB value
bytes/preparation). Earlier harness-export, SSH, npm provenance, backoff
and UI-wait failures remain recorded alongside their successful retries.
- Private evidence includes raw timings, assertions, HTTP probes,
screenshots and failure/cleanup receipts. Initial failed-campaign
cleanup suspended and retained the owned TEST tenant and released the
shared QA account lease at **15:22:41 UTC**. The tenant was subsequently
resumed under its existing ownership for the native execution
qualification above. Final cleanup completed at **15:53:09 UTC**: the
account lease is released and the tenant is suspended/retained under the
original October 30, 12:24:52 UTC retention deadline. Its separate stack
lease remains held; no active or pending-cleanup environment lease
remained. The original retention window is deliberately preserved even
after successful continuation.

- Earlier hosted-tested head:
`a2e597d800eb989d565780e7aa947d5368676444`, integrated with master
`929e840595`. The earlier merge conflicts were resolved at this head.
[Current-head
CI](https://github.com/paperclipai/paperclip/actions/runs/40884087629)
passed; all checks are complete with 55 successes, two neutral reports,
two skips, and no failures. [Apex review
15](https://github.com/paperclipai/paperclip/pull/18082#issuecomment-6480257258)
passed 5/5 with zero findings on this exact head. All review
conversations are resolved.
- Ten real-filesystem boundary cases and server typecheck pass locally
for the security fix. Coverage includes cache roots, descendants,
individual files, symlink aliases, recursive ancestors, a future
concurrent cache fill, and allowed sibling directories. [Current-head
private-project integration
tests](https://github.com/paperclipai/paperclip/actions/runs/40884087629/job/123483306405)
passed all 29 cases, including authorized and unauthorized imports of a
cached private package. Full typecheck, build, server suites, all eight
browser shards, and Runner checks passed in current-head CI. Local
database tests could not run because PostgreSQL could not initialize;
this limitation is recorded below.
- The earlier generated migration preserved the newest five snapshots.
The final integration renumbers its unchanged SQL to 0415. Migration
safety/numbering checks pass. Its SQL is byte-for-byte identical to the
previously verified idempotent skill migration; repeated application on
this latest schema was blocked by the same local database startup
failure.
- The broader verification before the final migration-only rebase passed
1,025 package, lifecycle, remote-launch, native-session, and
asset-retention tests, 52 focused UI tests, full workspace
typecheck/build, token gates, and map checks. The linked complete CI run
passed before the latest focused fixes.
- A disposable MinIO instance passed multipart upload, verified
read-back, and cold restoration of an 18 MB archive.
- Twenty warm samples with a synthetic 1,349-file, 22.8 MB repository
retained five metadata queries and zero object reads. Median preparation
was 256 ms for one selected skill and 691 ms for ten, with 5 ms emulated
network delay each way. These are local measurements, not production
latency guarantees.
- No production instance was changed. Earlier verification failures and
their disposition are retained below.

<details>
<summary>Earlier failures, review findings, fixes, and rerun
evidence</summary>

- The first CI pass found a stale inventory-span expectation and a
missing repository-read span. Both are fixed; all three observability
tests pass. One browser test copied page text into its YAML parser after
reload; its first unchanged-head retry passed, but the race recurred
after rebasing. The test now waits for the renamed URL and completed
reload before copying the editor, retaining its original assertions. The
earlier full local suite did not complete cleanly: it reported setup
timeouts and assertions, while isolated relevant reruns passed. The
complete current-head CI run closes that broad verification gap. No
production instance was changed.

- The first Apex review scored 2/5 and identified six issues. The fixes
protect authored history even when it shares an in-flight Git upload,
recheck upload expiry during orphan deletion, bound failed-upload
cleanup, retain per-version kind/encoding metadata, add sanitized
failure diagnostics, and correct the migration guide. The final focused
run passes all 140 tests; the preceding eight-file run passed all 149
tests, including local storage and S3 diagnostics. Server typecheck and
migration safety/numbering checks pass after the fixes. The second Apex
review scored 1/5 and found unbounded maintenance storage calls and
mismatched package/Git batch limits. Those are fixed with a 30-second
cancellable cleanup deadline, shared 100 MiB/10,000-file scanner and
storage limits, and bounded Git read batches. The proposed manual
lockfile edit was rejected with evidence of the enforced CI-owned
lockfile policy. All 19 storage/recovery unit tests and server
typechecking pass. The new database-backed cleanup/conversion tests were
locally skipped because the host exhausted its PostgreSQL semaphore
capacity (confirmed directly by initdb). That gap is closed by
current-head CI: [package-store
tests](https://github.com/paperclipai/paperclip/actions/runs/40771320775/job/123109300889)
pass all 18 cases and [package-worker
tests](https://github.com/paperclipai/paperclip/actions/runs/40771320775/job/123109301157)
pass all 7, with no skips in either suite. The corrected YAML browser
shard passes. A separate planning-fixture test failed its cleanup DELETE
with an activity-log foreign key violation after its behavior assertions
passed; its one unchanged-head retry passed. The third Apex review
scored 1/5 and identified a one-slot pool deadlock, projected path
limits, cleanup holding the preparation lock during archive reads, and a
publication/expiry race. These are fixed with transaction-local reads,
prefix-aware bounds, isolated verification, and shared package row locks
with a publication grace. The separate Paperclip review also found stale
historical inspection, eager history downloads, and conversion retries
blocking sleep. Those are fixed. Local PostgreSQL capacity recovered:
the new database regressions ran, including the one-slot fork, paused
storage during a warm turn, and a locked publication during expiry. The
expanded run passed 144/145 tests; its remaining assertion still
expected file bodies from the version list and was updated to fetch the
selected version. The corrected company-skill suite passes all 81 tests,
and the final package/projection run passes all 27. All 52 focused UI
tests pass after updating their query-provider fixtures; the first UI
run exposed a fixture remount, and the follow-up exposed an editing
syntax error, both corrected. Full workspace typecheck and build, token
gates, and map checks pass. The sandbox initially blocked the build
tool’s local IPC socket; the authorized build rerun passed. Master then
claimed migration 0401. The branch is rebased on f8226b0515, the
unchanged SQL is regenerated as 0402, and repeated application passed
twice on the combined schema. Post-rebase workspace typecheck passes.
All 1,025 package, lifecycle, remote-launch, native-session, and
asset-retention tests pass on the combined head. All CI checks passed
for head 9d80a3b52d. The fourth Apex review scored 3/5 and found a
save/edit lock-order cycle, a retry retaining an uncommitted source ID
in its recovery recipe, and a summary read racing conversion. Commit
b7d9237c6a fixes all three. The new concurrency and retry tests pass
within all 61 package/source tests, and server typecheck passes. Master
then claimed migration 0402. The branch is now rebased on 65fa1cd617 and
the unchanged SQL is regenerated as 0403. All 68 package, source, and
worker regressions, server typecheck, migration safety/numbering, and
repeated migration application pass on current head 62553671a0.
Subsequent verification and review outcomes are recorded below.


- The fifth Apex review scored 4/5 and found cached version reads
unnecessarily depending on object storage and conversion reads missing
the coordinator cancellation signal. Commit 1eb90d80be fixes both:
cached reads verify bytes without the preparation lock; manifest and
archive reads carry cancellation through conversion. The first focused
run passed 70/71 tests, including all three new cases, but the existing
diagnostic test observed no warning. Its fixture now sets an explicitly
expired migration deadline; the final worker suite passes all nine
cases. Server typecheck passes.


- The sixth Apex review scored 4/5 with one finding: concurrent cached
inventories were unbounded. Commit 4b7589e14c gives cached inventories
and previews a two-reader/32-waiter limit independent of cold storage.
The first expanded pressure test observed a third reader before the
preview path had the same bound; both paths now share the local limit.
All 73 focused cases pass, followed by all 29 package cases after the
final overload adjustment; server typecheck passes. The separate
Paperclip review found no must-fix or should-fix issues. Its optional
suggestion to persist durability verification was considered: cleanup
intentionally verifies current external bytes before discarding the last
local authored copy, and the missing-object regression requires that
check. Shared-package eviction happens on cold fills with at most two
attempts and a ten-second budget.


- The seventh Apex review reached 5/5 with one remaining P2:
timeout-bearing manifest reads bypassed request coalescing. The security
review also found repeated archive acquisition after a cold
administrative read. Commit 79a80a39d2 shares manifest loads with
per-caller cancellation and cancels the underlying work when the last
caller leaves; coalesces identical cold version/file requests; and
publishes verified restored packages into the shared cache. Publication
uses a short nonblocking lock, while eviction verification runs outside
it. The first expanded run passed 73/74 tests and exposed a missing
originating DB for cache publication inside read-only inspection;
transaction readers now pass that owner explicitly, keeping metadata on
the transaction. The corrected run passed 75/75. A final eviction test
initially expected the shared package to remain after only its separate
runtime projection was reused; it now explicitly accesses the shared
package during verification. All 32 final package tests pass, including
independent caller cancellation, one acquisition across
concurrent/repeated reads, and warm preparation during stalled eviction
verification. Server typecheck passes.


- The eighth Apex review scored 4/5 with one finding: decoded cold
inventories outlived the storage semaphore while waiting for cleanup.
Commit 9d7921d1ec adds a separate two-response/32-waiter lifetime bound
held through cleanup, preserving the independent warm-read queue and
forwarding cancellation through eviction verification. The new
regression pauses cleanup after two responses decode, verifies a third
archive stays queued, and completes warm preparation before releasing
cleanup. All 77 package/source/worker cases and server typecheck pass.
On the preceding head, serialized server shard 6/9 was interrupted with
“The operation was canceled” after 57 seconds of tests; the log contains
no failing assertion. Fresh latest-head CI reruns that shard along with
the other gates.

- The ninth Apex review scored 4/5 with one P1: cold responses could own
both permits while waiting on a one-slot ordinary database pool held by
a queued transaction reader. Commit a94f0e409f reads caller-scoped
metadata before admission and isolates all acquisition/cleanup SQL on a
private connection. The new real-PostgreSQL regression reproduces the
deadlock against the previous head and passes with the fix; all 78
focused cases and server typecheck pass. The previous CI run completed
with 54 successful checks, including both formerly interrupted/stuck
serialized shards.

- The tenth Apex review scored 4/5 with one P1: preloading legacy bodies
before admission could retain many full repositories in queued requests.
Commit 276e353a37 removes that preload and also bounds legacy manifest
derivation/fallback, using private connections inside the I/O slot. All
80 focused tests pass; the final synchronized package suite passes all
36 tests and server typecheck passes.

- Apex review 11 returned 5/5 with zero comments on 276e353a37. While it
ran, master 8bc051245f added migration 0403, creating a metadata
conflict. Merge commit e1783764d9 integrates master and generates
0404_clumsy_leo.sql; its skill SQL is byte-for-byte identical to the
previously verified migration. The combined schema passes migration
safety/numbering, repeated SQL application twice, all 80 focused
PostgreSQL tests, full workspace typecheck, and full build. The
preceding a94f0e409f CI run was superseded and cancelled while its final
runner job was active; no old-head success is claimed for that run.

- Final acceptance: Apex review 12 returned 5/5 with zero comments on
e1783764d9. All 28 review threads are resolved. The final head has 55
successful checks, two neutral reports, two skipped checks, and no
pending or failing checks; the PR workflow completed successfully.
Superseded run 40789121902 was cancelled to free its workflow slot for
the final head; normal cancellation did not finish promptly, so force
cancellation completed it.

- October 29 conflict resolution (867c00673b): master 929e840595 added
installed-selection reuse and bundled relocation, routine cleanup
notifications, a hardened YAML copy helper, and migrations through 0413.
The merge retains those behaviors together with package read scoping and
the public-selection fast path; restricted selections still reauthorize
and the full row read rechecks scope. Generated migration 0414 retains
the existing SQL unchanged. Workspace typecheck/build and migration
checks pass. Local database verification is unavailable: initdb reports
semget / “could not create semaphores: No space left on device”; all 168
cases skipped, and repeated migration application failed at startup.
Docker returned HTTP 500 during container creation, so no Docker test
pass is claimed. Current-head CI must close this gap.

- Apex review 14 scored 3/5 with one P1: a local import could copy
cached private package files into a company-wide skill. Commit
a2e597d800 rejects cache trees and ancestors through a canonical
filesystem boundary, including aliases and ancestors checked before a
concurrent fill. Ten local filesystem tests and server typecheck pass.
The existing private-project integration case now rejects package-cache
imports for both authorized and unauthorized users. The preceding merge
commit’s complete CI run passed, and logs confirm all 168 locally
skipped cases executed successfully: package store 36, sources 35,
package worker 9, runtime selection 4, observability 3, authoring 81.

- Apex review 15 returned 5/5 with zero new findings on a2e597d800. The
separate Paperclip review found no must-fix or should-fix issues. Its
optional suggestions were considered: unexpected filesystem cleanup
failures remain visible, the durable marker cannot replace checking that
bytes still exist before deleting a last local authored copy, and
administrative history batching remains outside the pre-turn
optimization. The cache-path literal centralization suggestion is also
optional; the current producer and guard use the same directory, covered
by the new integration regression. All review conversations are
resolved.

- Earlier October 29 CI/Apex acceptance: a2e597d800 was mergeable at
that check, Apex review 15 passed 5/5 with zero findings, and all review
conversations were resolved. The hosted verification above records the
later acceptance limits and renewed conflicts. Workflow 40884087629
completed successfully, with 55 successful checks, two neutral reports,
two skips, and no pending or failed checks. The project-skill-sources
job log confirms all 29 cases ran and passed, closing the latest
integration gap. The preceding merge workflow also confirmed all 168
focused database cases ran and passed. No local PostgreSQL or Docker
pass is claimed.

</details>

## Risks

- First use after eviction can require storage or Git access. Revoked
grants, removed sources, and unreachable commits can prevent
reconstruction. Recovery never substitutes a newer commit.
- Historical packages without a proven recipe keep durable bytes.
Cleanup favors retention when a run pin cannot be interpreted safely.
- New uploads and conversion use bounded work and persisted retries.
Large initial conversions still add temporary storage and database load.
- Optional cleanup can wait until the next server wake. Supported
notifications assume one owning server process.
- Per-entrypoint native tree duplication and cold preparation cost
remain. The final ten-skill cold sample took 47.6 seconds on the shared
host.
- Generic authored edits can still hold an existing edit transaction
while a package uploads.
- Explicit file/folder deletion uses temporary disk space for rollback.
An uncertain commit with a changed skill or unavailable database retains
that backup and logs its location for recovery.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning, repository tools, code
execution, and tests. The exact served model ID and context window are
not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-29 12:19:37 -05:00
DottaandPaperclip 60b8089a44 fix(runner): trust managed Cloud sandbox images (#18066)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Cloud selects and updates the sandbox image used by its agents.
> - Runner admission also required saved qualification for the exact
snapshot and configuration.
> - An image update left the old record stale and stopped work before
runtime startup.
> - This pull request trusts the image selected by Cloud and uses the
real runtime startup check.
> - Agents can continue after an image update without an operator
running a separate qualification test.

## Linked Issues or Issue Description

**What happened?**

A managed Cloud image update could cause
`sandbox_snapshot_qualification_required` before provider work began.
Runner discovery also fell back to Legacy when saved platform
qualification was absent. The agent Test action could require a separate
qualification request even when discovery already offered Paperclip
Runner.

**Expected behavior**

A managed Cloud image can start without a saved qualification record.
Runtime startup and the handshake report actual compatibility failures.
Custom images keep their existing qualification rules.

**Steps to reproduce**

1. Use Paperclip Runner on a Paperclip-managed Cloud sandbox.
2. Save qualification for its current snapshot.
3. Update the platform-selected snapshot and leave the old record in
place.
4. Start a task. Before this fix, admission rejects the stale record
before starting the provider.

Related work: Refs #17445, Refs #17724, Refs #17448. These changes cover
saved-computer qualification and setup tests. This fix removes the
qualification prerequisite only for managed Cloud images.

## What Changed

- Use one managed-image policy in runner selection and lease admission.
Require the active Cloud configuration to provision the provider. Active
captured custom images are excluded.
- Use the current Cloud image and ignore missing, stale, revoked or
valid saved qualification records for that image.
- Reuse the existing provisioned-runner selection path. Keep adapter
availability checks and the Legacy choice for managed sandboxes.
- Read custom-image metadata directly during discovery without resolving
provider credentials.
- Use the existing template-matching rule for captured images. Ignore
outdated captures, preserve qualification for matching custom captures,
and fall back to Legacy discovery for malformed saved capture config.
- Skip the separate qualification request when discovery already offers
Paperclip Runner as the default. Test checks the actual runtime.
- Add regressions for image updates, provider failures, custom images,
self-hosted environments and company access. Update the development and
verification guides.

## Verification

- Before the fix, managed-image discovery regressions returned Legacy,
and the rendered Test action called the separate qualification endpoint.
- The original runtime source fails four of the five managed-image
regression cases. The fixed runtime passes all five, including provider
startup error propagation. The baseline check uses the original module
source through a temporary Vitest transform and the same database-backed
tests.
- All 603 focused tests pass: 231 runner selection, 185 environment
runtime, 10 snapshot qualification, 168 rendered agent form and nine
form source controls. Discovery controls cover unavailable credentials,
stale managed markers without an active provisioner, outdated captures,
matching custom captures and malformed saved config. The
outdated-capture regression fails before the fix and passes afterward.
- `node scripts/check-maps.mjs` and `pnpm check:token-gates` pass.
- Full `pnpm -r typecheck` and `pnpm build` pass. All five focused files
passed together on `8275bbe72bb4d91fb3a02fb0658f0846b2abc966`
(`codex/simplify-managed-runner-readiness`, Node 24.19.0, macOS ARM64).
- The full local `pnpm test:run` suite is still in progress. Hosted CI
is waiting at `ci / gate / Select trusted runner`; the separate `review`
workflow is queued. Greptile is 5/5 on the current head, and both review
threads are resolved. This PR is not yet verified by full CI.
- Live fixed-source Daytona acceptance is not verified. This workspace
has no Daytona API key or image configuration. The earlier deployed
recovery is not evidence for this source change.

## Risks

- Managed Cloud now trusts its selected image. A bad image can fail at
real runtime startup instead of a saved qualification gate.
- Company access, credentials, runtime integrity and handshake checks
still apply. Self-hosted sandboxes, custom environments and active
captured custom images keep their qualification and immutable snapshot
binding.
- No schema change or data migration is required. Existing qualification
records can remain in place.

## Model Used

- OpenAI Codex, GPT-6 family, with reasoning, tool use and code
execution. The exact model ID and context window are not exposed in this
session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-28 14:39:26 -05:00
d30c8f42b8 feat(ui): keep writes durable through temporary disconnects (#17960)
<!-- entire-trail-link-start -->
https://entire.com/gh/paperclipai/-/trails/123/changes/paperclip/123
<!-- entire-trail-link-end -->

## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - People save tasks, write documents, make decisions and send board
messages.
> - A disconnect can hide a response after the server accepts a write.
> - Recovery must keep the original account, task and request key.
> - The merged connection foundation in #15754 handles reads and shared
outage state.
> - This change adds bounded write recovery and explicit actions when
recovery stops.

## Linked Issues or Issue Description

**What happened?**

Temporary failures could lose edits, report accepted writes as failures,
or require people to copy and send input again. A retry could target a
newly selected task or account. Restoring attachments could create a
second task.

**Expected behavior**

Keep the draft, its owner and its target. Retry only operations with a
server contract that prevents duplicate writes. Verify uncertain
results. Show conflicts and permanent failures, with an explicit resend
or cancel action.

**Steps to reproduce**

1. Save a task title during an outage, then open another task before
recovery.
2. Restore a task creation that needs files, selecting those files in
another order.
3. Lose a document or decision response, then interrupt the verification
read.
4. Switch accounts while a create, upload or connected-channel
publication is pending.
5. Type and erase a new-task draft before the first account lookup
completes, then reopen it.

This PR carries the write layer from #15769 and its review fixes. It
targets master after #15754 merged. Related test cleanup #16952 already
covers the unchanged copy-link toast test; this PR does not duplicate
that work.

## What Changed

- Add bounded autosave and submit jobs for supported writes, with
pending, conflict and manual retry states. Retain admitted autosaves
after navigation and preserve newer task revisions.
- Keep each job with its original account, task and operation. First
account resolution adopts admitted startup work; a later account change
cancels old work. Remount inline and document editors when their owner
or document subject changes.
- Preserve task-creation keys and immutable request snapshots through
file reattachment. Restore generated document keys before comparing
reselected files. Reject changed requests instead of creating a second
task.
- Check the original account scope before creates and each upload. Save
successful upload receipts before stopping on an account change.
Identify attachments by content digest and metadata.
- Verify uncertain document and decision results. Replay only plain,
keyed comments automatically; combined reassignment, reopen and
run-setting changes require receipt reconciliation or cancel. Settle
each request once when a receipt races its retry.
- Scope drafts and connected-channel publication reads to their owner.
Keep unowned older records unread and unreplayed, with an explicit
confirmed discard action after Activity inspection. Preserve typing
through the first session lookup, keep erased text erased, and report
browser persistence only when storage succeeds.
- Wait for the first account lookup before sending startup status
changes or decisions. Retry failed required lookups with a fixed limit
and surface exhaustion to the original action. Preserve uncertain
comment keys on account cancellation. Check the account generation
before a comment retry calls its sender and again immediately before
POST after asynchronous preparation. Retire only that request’s
optimistic echo on completion.
- Return an ordinary comment’s accepted same-company, same-task,
same-user receipt before workspace reopening, task status changes or
wakeups. Reused keys with changed text still conflict. Complete
reference and activity records through the same finalizer for initial
sends and accepted retries. It locks the task before its comment,
matching task and company deletion, comment removal and tombstoning,
rejects removed or tombstoned comments, repairs references and inserts a
missing activity record in one transaction, and publishes after commit.
- Remove reader-only record and comment-body size caps so accepted
browser writes remain readable, including JSON-escaped comment requests
in local and session storage. Update four existing Storybook fixtures to
use owned draft keys.
- Document the write contracts and add regression and real browser
recovery coverage.

- Add the exact reviewed-save recovery regression for both composer
implementations and reloads. Align receipt completion, both comment
deletion methods and company deletion with task deletion by locking
tasks first. Cover real task and company deletion races.

## Verification

- The exact reviewed-unknown-save regression fails in all four cases on
original commit `1ed0af4186`. It passes with this PR for both composers,
before and after reload. Cancel keeps the text and uploaded receipt. The
retained draft sends, and the next message also sends. Run `pnpm exec
vitest run --project @paperclipai/ui
ui/src/components/composer-recovery.test.tsx`.
- The new real PostgreSQL task-deletion race fails with SQLSTATE `40P01`
on parent commit `f3253a00c4`. The company-deletion race also fails with
`40P01` on `e8cf0e02dd`. All six receipt tests pass after the final
lock-order fixes. They cover company deletion, task deletion, comment
removal, tombstoning, concurrent cross-task references and interrupted
reference repair. Run `pnpm exec vitest run --project
@paperclipai/server
server/src/__tests__/issue-comment-receipt-postgres.test.ts`.
- The full UI run passed 9,656 of 9,659 tests across 816 files. Three
cases failed under that run: two large-tree timeouts and one
plugin-panel assertion. All 67 tests in those two files passed in an
isolated rerun. These failures remain recorded; this does not claim a
clean full UI run.
- `pnpm -r typecheck`, `pnpm build`, token gates and map checks pass on
the final change. The local full repository test command was started,
then stopped when the delivery moved to this existing PR. Fresh PR CI
must provide the full-suite gate.
- A local Storybook walkthrough used the real rich editor. Cancel kept
the restored text, Send cleared it after the simulated save, and a new
draft enabled Send again. Storybook simulates submission; it is not
staging acceptance.
- Earlier verification on `f3253a00c4` recorded five browser journeys
for title saves, cached-task offline recovery, startup recovery,
accepted comment replay and session lookup failure. Those results remain
prior-head evidence. No new staging deployment is claimed.

- On `e8cf0e02dd`, all CI checks passed after one browser-shard rerun.
Its first failure copied page text instead of YAML in an unrelated
agent-configuration test. On final commit `35131d4380`, Greptile is 5/5
with no unresolved review threads. The first CI attempt has two failures
outside this diff: runner close-attachment suspension and
scheduled-retry teardown. The scheduled-retry file passes all 14 tests
in isolation; the isolated runner test still fails locally. The single
standard CI rerun passed both jobs, and the aggregate verification gate
passed. All CI checks are green on `35131d4380`; Apex is 5/5 on that
same commit with no unresolved findings.

## Risks

- Automatic replay requires server duplicate prevention or result
verification. Uncertain combined mutations require receipt observation
or cancel and a fresh intentional send.
- Old unowned form drafts remain stored but are not assigned to an
account. Unowned channel records can be retired after Activity
inspection; this never cancels an accepted remote update.
- Browser storage and hashing can be unavailable. Storage failure is
reported honestly. Without a digest, replay can duplicate an upload
rather than silently drop a selected file.
- Detached autosaves remain bounded and check account ownership on each
attempt. Conflicts or exhaustion retain the draft for explicit recovery.
- No schema, credential or agent permission change is included. This PR
does not claim staging deployment or original-task acceptance.

## Model Used

Anthropic Claude Opus 5.5 (`claude-opus-5-5`) produced the original
implementation with tool use. OpenAI Codex, GPT-6 family, assisted with
restoration, integration, verification and review fixes. This Codex
session does not expose its exact serving model ID or context window
size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: devinfoley <139239+devinfoley@users.noreply.github.com>
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Amy (Opus) <claude@users.noreply.github.com>
Co-authored-by: Dotta <bippadotta@protonmail.com>
2026-10-28 10:52:06 -07:00
DottaandPaperclip c08da3e0a7 perf(server): narrow skill list reconciliation reads (#18023)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The skill library lists current company skills and their agent
attachments.
> - Each list request also reconciles bundled skills, folders, and local
files.
> - These reads return full agent records and large metadata that their
callers do not use.
> - Conditional requests do this work before they return an unchanged
response.
> - This pull request selects the fields each caller needs and avoids
unused folder lookups.
> - The result is less database transfer and fewer round trips while
reconciliation stays current.

## Linked Issues or Issue Description

Refs #17941. That change reuses bundled categories within an import.
This change removes other repeated work in the same list path.

**What happened?**

Warm skill-list requests still made 119 SQL calls in a local HTTP
fixture. The folder pass returned full skill metadata. The local-source
pass also returned remote skills. Attachment counts loaded full agent
configurations and monthly spend. Bundled reconciliation resolved folder
paths that its release check did not use.

**Expected behavior**

The list must preserve its current result, attachment counts, access
rules, local-file reconciliation, and bundled release checks. Internal
reads should return only the data their callers need.

**Steps to reproduce**

1. Use a company with many remote skills and agents with large saved
configurations.
2. Read its skill list, then repeat the read with its ETag.
3. Measure the queries and response values before the server returns
`200` or `304`.
4. Run `pnpm --filter @paperclipai/server exec tsx
scripts/benchmark-skill-list.ts --samples=5 --network-delay-ms=3.5` for
a synthetic reproduction.

**Paperclip version or commit**

Baseline service: `e1ba77f06771a27114b3999004b0ca5e3c172dd4`. The branch
is based on current master. The paired mode changes only the
skill-service module; both versions use the same imported helpers.

**Deployment mode**

Built from source. Local HTTP server and disposable PostgreSQL 17. No
hosted deployment is part of this PR's local proof.

## What Changed

- Read only the desired-skill selections of nonterminated company agents
for attachment counts. Resolve each agent's references once against the
full visible skill list. Preserve IDs, keys, aliases, duplicate
handling, and ambiguous slugs.
- Read only `sourceKind` from metadata for bundled folder
classification.
- Limit local-source reconciliation to local-path rows.
- Skip folder-path enrichment only for bundled reconciliation. Normal
imports and list responses keep their folder paths.
- Add real-database byte regressions and a local HTTP benchmark. The
benchmark can alternate the old and new services against one database,
actor, and process. It checks complete response equality and conditional
responses.

The company-skill service owns these reads. The query predicates and
freshness checks remain at their existing owners. This change adds no
cache, schema change, or new background work.

## Verification

- The attachment byte regression failed before the fix: 601,418 captured
response-value bytes exceeded its 2,000-byte bound. The same case passed
after the fix. It checks fresh configuration edits, IDs and keys,
duplicate aliases, ambiguous slugs, paused agents, terminated agents,
and company scope.
- 111 focused service and authorization tests passed against isolated
real PostgreSQL 17 databases. They include full result equality,
retained stored Markdown and metadata, local-file updates, release
checks, project visibility, and import authorization.
- The default embedded PostgreSQL probe skipped the first local attempt
on this Mac. The completed run used a local-only bootstrap adapter for
disposable databases. Queries, migrations, services, authorization, and
filesystem work used their real implementations. The adapter is not part
of this PR.
- In repeated synthetic HTTP byte runs, calls fell from 119 to 98 per
request. Result-value bytes fell from about 7.75 MB to 1.64 MB per
request, about 79%. These values are measured before Drizzle decoding.
They exclude protocol framing and do not measure provider billing.
- A separate-process run without the byte observer did not show a
latency gain. The paired experiment removes that comparison gap: it
alternates both services against the same database and checks identical
complete responses. On final commit
`3076fe1402085f7286ff58e642d7caca892a5f80`, five observer-free pairs had
median times of 2.582 s before and 1.850 s after (28.3% lower). The
candidate was faster in all five pairs. Its range was 1.802–2.199 s; the
baseline range was 2.327–2.725 s. Every normal response had the same
complete body hash, and both versions returned the expected unchanged
conditional responses. These are local service/HTTP timings with
synthetic data and 3.5 ms delay per network direction. They are not
hosted acceptance.
- Final-head workspace typecheck and build passed. The full local test
command did not complete because embedded PostgreSQL bootstrap failed on
this Mac; I stopped that owned runner after 16 native-runtime cases
failed. All 16 cases then passed when rerun alone against disposable
PostgreSQL 17 using their existing external-database path. The 111
focused PostgreSQL 17 tests above also completed successfully. This does
not constitute a completed full local suite; all current-head remote CI
gates passed (55 successful checks and 2 skipped). Module-boundary and
whitespace checks pass. An initial nested package command used the
global pnpm; subsequent commands were pinned to pnpm 9.15.4.
- The first canary dry run failed while installing an unrelated
standalone package: npm returned 404 for the newly published Rollup
4.66.0 tarball. The exact download subsequently returned HTTP 200. The
one retry passed without code changes.
- Benchmark commands: add `--capture-values=false` for observer-free
timings. Add `--baseline-ref=e1ba77f06771a27114b3999004b0ca5e3c172dd4
--capture-values=false` for paired service acceptance. The normal mode
uses the production router. The paired mode uses equivalent default-list
HTTP handlers and a synthetic authenticated board actor; it does not
test login.

## Risks

The SQL selection must stay in sync if the desired-skill format or
folder classifier needs new fields. Existing parsing and reference
resolution still interpret the selected data.

The synthetic fixture has large unused payloads. It proves the mechanism
and preserves required content. Its percentage is not a projection of
whole-instance transfer or billed savings. Hosted latency still needs
verification after merge and deployment.

## Model Used

OpenAI GPT-6 through Codex, with repository inspection, shell execution,
real PostgreSQL, and local HTTP testing. The host does not expose a
precise backend revision or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-28 09:07:17 -05:00
DottaandPaperclip 6ce0909db4 fix(agents): skip runtime probes for unchanged connections (#18016)
## Thinking Path

> - Paperclip manages AI agents and their runtime settings.
> - Operators save identity, model, connection, and run-policy settings
from the agent page.
> - PostgreSQL stores connection bindings as JSONB and can return keys
in a different order.
> - The save route compared JSON strings and treated an unchanged
binding as a new connection.
> - That false change started a remote runtime and credential probe
during ordinary saves.
> - This pull request compares binding values and checks real execution
selection changes separately.
> - Ordinary edits save without a probe. New connections and execution
selections retain validation.

## Linked Issues or Issue Description

Fixes #14518.

Related work: #17760 also addresses prospective environment resolution.
#14027 also adds explicit connection removal. This change is limited to
the save validation gate and its regressions.

**What happened?**

A title-only save took 9.8–16.0 seconds in a hosted reproduction. JSONB
key order made the unchanged AI connection look different. The route
then waited for a remote runtime probe.

**Expected behavior**

Identity, thinking-effort, and run-policy edits skip the probe when the
connection and execution selection stay the same. A changed connection,
harness, model, provider, engine, or environment still validates
adoption.

**Steps to reproduce**

1. Save an agent with a managed AI connection in PostgreSQL.
2. Edit its title or thinking effort without changing the connection or
execution selection.
3. Observe that the old route starts the adapter environment test. The
fixed route saves without that test.

## What Changed

- Use value equality for the stored and validated AI connection
bindings.
- Compare the effective execution selection separately. Preserve runtime
probes for real selection changes and existing Copilot checks.
- Add PostgreSQL route regressions for shared, delegated, default-user,
and pooled bindings. Cover failed connection, model, engine,
environment, and harness changes.
- Keep the existing credential rejection and reconnect tests. Document
the save behavior.

## Verification

- `pnpm -r typecheck` passed on the rebased implementation.
- Focused PostgreSQL 17 route selection: 21 passed, 58 excluded by the
name filter. This covers ordinary saves, selection-change rejection, and
credential health.
- Full PostgreSQL 17 connection suite: 79 passed, zero skipped. Final
`pnpm build` passed at `8fde75fa1a8fe63c71b05a3db149edf289295672`.
- Before the fix, the PostgreSQL regression reached the unintended probe
and failed for unchanged shared, delegated, and default-user bindings.
The pool control passed.
- An early controlled HTTP comparison of the binding fix used a
synthetic 500 ms provider probe: five measured saves had a median of 798
ms before and 56 ms after. Probe count fell from five to zero. This is
local supporting evidence, not a hosted latency result.
- Earlier adjacent-route run: 159 of 160 tests passed. One existing
roster-edit case exceeded its 15-second timeout. That case passed alone
with the normal timeout. The cause of the earlier timeout remains
unproven.
- Local full-repository tests were not run. Native PostgreSQL startup
fails because the host has exhausted System V semaphores. The focused
tests use an isolated PostgreSQL 17 Docker fixture.
- `git diff --check` passed. Hosted improvement remains unverified until
deployment.
- Greptile and Ponytail Paperclip Review both rated the exact head
`8fde75fa1a8fe63c71b05a3db149edf289295672` 5/5, with no actionable
defects.
- CI attempt 1 passed 51 checks. Three self-hosted runners lost
communication, interrupting the chat shard, serialized server shard, and
canary dry run. GitHub annotations identify the runner communication
failures; the serialized shard log also records a shutdown signal. Only
those failed jobs were retried, once, on the unchanged commit. The [full
CI
workflow](https://github.com/paperclipai/paperclip/actions/runs/40692641103/attempts/2)
then passed on attempt 2 at the same commit. All 55 passing checks and
the legacy Snyk status are green; no checks remain pending.

## Risks

This changes when connection adoption validation runs. Separate
selection checks preserve validation for real runtime changes.
Regression tests verify that rejected selections do not replace the
saved configuration. Company access, connection authorization, activity
records, and Copilot checks retain their existing paths. There is no
schema or migration change.

## Model Used

OpenAI Codex, configured model `gpt-6.1-sol` with ultra reasoning. Work
used source inspection, shell tools, browser network timing, and
PostgreSQL route tests. The context window size is not exposed by this
session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-28 08:25:27 -05:00
39279aa34f feat(ui): shared error, connectivity and query foundation for disconnects (#15754)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The board reads API data and keeps the current task on screen.
> - A restart or temporary network failure can interrupt those reads.
> - Separate page error handlers can hide cached data or expose raw
server codes.
> - The app needs one connection state, readable error copy and a
consistent read policy.
> - This change provides that foundation and moves affected read
surfaces onto it.
> - The dependent write layer in #17960 preserves edits and submissions
across the same failures.

## Linked Issues or Issue Description

**What happened?**

Temporary API failures could replace loaded content with errors.
Different surfaces handled the same outage differently. Some showed raw
server codes. A successful query to an unrelated service could also
falsely report that Paperclip had recovered.

**Expected behavior**

Keep cached content visible. Show one connection banner during sustained
trouble. Confirm recovery through the Paperclip health probe or its
WebSocket. Retry transient reads and show readable errors for permanent
failures.

**Steps to reproduce**

1. Open a populated task or workspace page.
2. Interrupt API requests with a 503 or a dropped connection.
3. Keep an unrelated external request in flight.
4. Confirm that cached content remains and that the external result
cannot clear the outage.
5. Restore the API and check that reads refresh.

The write layer first merged into this feature branch in #15769 now has
its own dependent PR, #17960. This PR contains the shared foundation and
read changes. Merge this PR first.

## What Changed

- Classify API errors and provide readable error copy, including
non-JSON proxy responses and Retry-After handling.
- Use one connection store and health probe with bounded backoff.
Confirm recovery from the server health probe or live-updates WebSocket.
- Pause reads while disconnected, retry transient errors, and refresh
active reads after recovery.
- Keep cached data visible through shared query views and affected page,
panel and plugin read surfaces.
- Add one app-level connection banner and support the pending-write
count consumed by the dependent write layer.
- Add a query-error rendering guard. Call it directly from the existing
CI step. Update development documentation.

## Verification

- Historical-chat lookup now follows the same ready/stale roster state
as rendering. Three regressions fail before the fix; the six new cases
pass after it, including working Retry, fresh data, no-cache error,
permanent 403 and company isolation. All six focused query/recovery
suites pass 200 tests. Final-commit CI passes and Apex is 5/5 with no
unresolved findings. Canary Dry Run initially refused a preview version
that was already on npm. It passed after one rerun with fresh registry
metadata; no check was disabled.

- Integrated current master and retained both transcript interest
registration and connectivity reporting on socket open. The seven
focused recovery/query suites pass 288 tests, and UI typecheck and
production build pass. All 9,451 UI tests across 799 files pass on the
merge commit. Final-commit CI passes and Apex is 5/5 with no unresolved
findings.

- Current head `70d9335d732219352ef0f98414439766bbcb33df`: all hosted CI
checks pass. Apex is **5/5** on that head with no unresolved findings.
The branch has no merge conflict. GitHub still requires code-owner
approval.

- The foundation passes 9,430 UI tests in 804 files. After integrating
current master page paths, 190 focused page tests pass.
- Two unrelated-success regressions fail before the latest fix. With the
fix, 62 focused UI tests, all six guard tests and UI TypeScript pass.
- The composed foundation and write layer pass **9,505 UI tests in 808
files**, UI TypeScript, a production UI build, and query-error, token
and map guards.
- A real Chromium journey on the composed source injects a 503 during
title save. The loaded task stays visible; one reconnect banner appears;
the edit saves after recovery; another task stays unchanged; the saved
title survives reload.
- Full recursive local checks were not repeated because Runner
compilation exhausted local disk during another repair. Hosted checks
must pass before merge. No new staging deployment is claimed.

- Latest review follow-up: a cached CaseDetail now survives a failed
HTTP 429 refresh. Its page regression fails before the fix and passes
after it. Eighty focused foundation tests, UI TypeScript, build and
guards pass after that change.
- Earlier CI evidence is retained: several foundation jobs received a
runner shutdown signal together. The write-layer head also failed an
unchanged Runner descriptor close test with `provider_transport_failed`.
The same Runner source passed that suite in the foundation run. New CI
runs cover the updated heads; no check or assertion was weakened.

## Risks

- Shared retry defaults change the time before transient read errors
appear. Permanent errors still fail promptly.
- ApiError.message now contains readable copy. Callers that compare raw
codes must use ApiError.code.
- Cache success can come from another service or local data. It must not
confirm Paperclip recovery.
- Durable writes are reviewed separately in #17960. This PR does not
change database or mutation contracts.

## Model Used

Anthropic Claude Opus 5.5 (`claude-opus-5-5`) produced the original work
with tool use. OpenAI Codex, GPT-6 family, assisted with restoration,
integration, tests and review fixes. The Codex session does not expose
its exact serving model ID or context window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: devinfoley <139239+devinfoley@users.noreply.github.com>
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Amy (Opus) <claude@users.noreply.github.com>
2026-10-27 21:22:07 -07:00