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84fe89906d8a5441256cf21ac65bba7e568233d0
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84fe89906d |
fix: complete native agent review handoffs (#13581)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Native execution uses durable runs, issue locks, wake requests, and typed tool authority > - A child can finish with a native agent review request while its original assignee stays responsible for the work > - The reviewer then needs a bounded execution path that can inspect the child, record one decision, and finish safely > - Before this change, assignee-only gates rejected the reviewer or left the parent waiting after the child review ended > - This pull request adds typed reviewer admission, scoped reviewer tools, durable wake and recovery handling, and parent continuation evidence > - The benefit is that native review handoffs complete without changing child ownership or granting broad mutation access ## Linked Issues or Issue Description Refs: #13314 Refs: #13574 **What happened?** A native child run could report `needs_review` for an agent reviewer. The reviewer wake then failed assignee and execution-lock checks. The child remained in review and the parent remained waiting. **Expected behavior** The named reviewer should receive one durable wake. The reviewer should inspect the child and resolve the exact review card. The child assignee should stay unchanged. The parent should receive the recorded review outcome after the child reaches its terminal state. **Steps to reproduce** 1. Run a native task with a different named agent reviewer. 2. Keep the child assigned to its original worker. 3. Let the worker finish with a native completion review request. 4. Start the durable reviewer wake. 5. Resolve the review and finish the reviewer run. 6. Observe the child and parent state. **Paperclip version or commit** Base: `e926b1301`. PR head: `b31ad9ab8`. Live reviewer verification source: `eea171aae`. **Deployment mode** Built from source. **Installation method** Built from source (pnpm build). **Agent adapter(s) involved** Not adapter-specific (core bug). **Access context** Both. **Database mode** Embedded PostgreSQL in the isolated live test fixtures. ## What Changed - Add server-validated native review assignment facts. - Admit only the exact company, issue, source run, decision, revision, addressee, and resolver policy. - Give reviewer runs a narrow set of Paperclip read and resolve tools. File and shell access follow the configured agent and environment policy, so reviewers can run tests. - Separate server-owned reviewer instructions from untrusted persisted review data. Escape the data boundary; retain server-enforced authorization. - Keep the child assignee unchanged. Atomically claim the reviewer run, wake request, and issue execution lock. A competing lock prevents provider startup. - Require the exact running reviewer session and current issue lock to resolve its assigned card. Reject missing, unrelated, or terminal reviewer runs. - Add durable reviewer wake, lock, stale-card, and abandoned-run recovery handling. - Prevent duplicate native wake dispatches during deferred admission and recovery. - Carry accepted or rejected child review outcomes into parent task context and continuation evidence. - Add focused server, runner, and native protocol coverage. - Preserve upstream continuation rules. Add child review decisions as separate evidence, while keeping real human answers in their own field. - Return actionable completion validation feedback to both providers. Permit a corrected completion after rejection. Keep strict terminal acknowledgment validation. - Apply exclusive shared-workspace locks to sandbox environments. Local and SSH folders can run concurrently, including when old settings request serialization. - Repair test timing, native event parsing, and the review artifact assertion. Allow a valid reject, correct, and accept review sequence. Check the accepted card against its reviewer run and decision. Keep polling within the existing deadline when review acceptance precedes the parent wake projection; report a specific missing-continuation error at timeout. - Apply the ACPX pending-call limit to reserved finish/block calls, with capacity-release and cancellation tests. ## Verification - `pnpm build`: passed on `eea171aae`. - `pnpm -r typecheck`: passed on `eea171aae`. - `pnpm test:e2e:runner:unit`: 359 tests passed in 30 files on `b31ad9ab8`; runner E2E typecheck also passed. - `pnpm check:token-gates`: passed. - Focused DB review, reviewer authority, and prompt-boundary checks: 31 tests passed. They cover invalid reviewer runs, competing locks, atomic admission, duplicate claims, and valid resolution. - Heartbeat, workspace, and recovery checks: 30 tests passed. - ACPX sidecar suite: 27 tests passed. Moving the capacity guard back below reserved handling makes both new regression cases fail. - Four focused live continuation checks passed on their first attempt at `f15f55e0a`: answer updates scope (6/6 each on Codex and Claude) and question tool guidance (12/12 each). These cases do not use the reviewer prompt path changed afterward. - Fresh Codex and Claude review-handoff checks passed all 29 native checks each on their first attempt at `eea171aae`. Both runs received the expected fixed prompt and completed cleanup. Only the six selected live flows were tested; no full paid provider catalog run. - The final commit only extracts the existing test-harness timeout diagnostic into a shared helper and adds positive and negative coverage. Removing the accepted-review guard makes two regression assertions fail; restoring it passes all six timeout tests. Production runtime code, prompts, deadlines, and grading criteria are unchanged by this final commit. - Deadline regressions: a valid continuation delayed 20 seconds succeeds within its 30-second unit-test deadline; an absent wake returns a specific candidate-failure diagnostic at that same deadline. Both assertions failed before the fix. Production E2E deadlines remain unchanged. - Historical native failures remain recorded: Docker availability failures; a valid reject/correct/accept sequence that the first-card grader misread; and a test that rejected the gap between accepted child review and parent wake projection. No failed result was regraded. The latest tests use a protected reference to the pinned Docker image and the unchanged artifact oracle and time limits. - Full repository verification runs in GitHub CI. Local verification uses the focused suites above, full build, and full typecheck. An unchanged Codex shutdown timing test failed once in CI, passed in isolation, and its full shard passed on the final commit without changes to that test or its causal code path. The original failure is retained in the verification record. Greptile reviewed `b31ad9ab8` at 5/5 with no outstanding actionable findings. All review threads are resolved. All current-head CI gates passed, including the isolated native runner Docker build (55 successful checks; two skipped by the workflow). ## Risks - Reviewer admission depends on exact persisted decision and interaction bindings. A stale or changed card is rejected. - Paperclip control-plane tools are limited to inspection and review resolution. This is not a filesystem permission boundary; provider file and shell access retain the configured policy. - Deferred wake recovery changes dispatch receipt coalescing. A scheduler regression could delay a continuation if the receipt state is wrong. - Parent review outcomes are evidence for the model. They do not grant tool authority or change issue ownership. - This change does not address legacy lease-hold handoff behavior. > Roadmap review: native execution, review gates, and durable recovery are existing roadmap capabilities. This PR completes a narrow reliability path for those capabilities. ## Model Used OpenAI `gpt-6-astra` with reasoning, tool use, and code execution. OpenAI `gpt-5.6-luna` assisted with bounded implementation, review, and journal work. Context window size is not exposed by this session. Live test subjects use `gpt-5.6-sol` and `claude-sonnet-5`; they are not the PR authors. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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e926b13017 |
fix: keep sandbox termination progressing after bridge loss (#13287)
## Thinking Path > - Paperclip must stop remote execution after losing its controller. > - A bridge can remain blocked while the sandbox still incurs costs or performs actions. > - Waiting forever for that bridge prevents provider termination. > - A temporary provider outage can also exhaust cleanup attempts permanently. > - This pull request bounds bridge drain and persists cleanup retries with backoff. > - Cleanup ends only after provider confirmation, without a user accepting uncertain side effects. ## Linked Issues or Issue Description Builds on merged #13285. Related #13254 added exact provider termination receipts; merged #13272 adds explicit user retry. Merged #13352 stops active sandbox startup before waiting for setup. This PR preserves that immediate cancellation path and extends bounded teardown to ordinary release and destroy. Cleanup continues automatically after repeated provider failures. Refs #12953 for provider failures blocking execution. **What happened?** Daytona release waits for in-flight bridge activity before stop/delete. A dead bridge can prevent that wait from finishing. The host also stops cleanup after five failed attempts. **Expected behavior** Provider termination proceeds after a bounded bridge drain. Cleanup retries survive service restarts and provider outages. **Steps to reproduce** Start a sandbox command whose bridge promise never resolves, then release its lease. Separately, persist a pending-cleanup lease with five failed attempts and recover the provider. **Deployment mode** Hosted Paperclip with a Daytona provider; rebased onto master at `728f7185f` on September 14. ## What Changed - Bound bridge drain and provider lifecycle calls. Prefer stop for reusable sandboxes, with delete fallback. - Persist cleanup attempt identity, renewable in-flight deadline, and cooldown. Fence completion writes against superseded attempts. - Preserve scoped explicit Retry and its activity log. Explicit Retry can skip cooldown, but cannot take over a live cleanup attempt. - Continue cleanup after five failures with slower retries and an operator warning. - Exclude leases in cooldown before paging so they do not starve due work. - Add hung-bridge, restart, provider-recovery, and concurrent-cleanup regressions. ## Verification - Rebased onto master at `728f7185f`. The outstanding diff contains only cleanup changes; the merged controller-ownership prerequisite is excluded. - Daytona plugin suite: 160 passed, including immediate startup cancellation, graceful release, hung activity, and teardown regressions. - `pnpm exec vitest run server/src/__tests__/heartbeat-pending-cleanup-sweep.test.ts`: 31 passed. Two added integration cases verify explicit Retry during cooldown and while another cleanup owns the lease. They also verify run scoping and the activity log. - Targeted cleanup and cancellation cases in `environment-runtime.test.ts`: 20 passed. - Earlier live disposable Daytona test: provider stop ended background work, resume preserved files without restarting the old process, a new command succeeded, and the sandbox was deleted. This verifies provider behavior; it was not repeated for this rebase. - Latest-head CI and automated review are pending. Broad local tests, typecheck, and build were not rerun for this focused rebase; CI supplies those checks. ## Risks - Timing out bridge drain permits provider termination; it never supplies a stop receipt. - A crashed cleanup attempt remains protected for 15 minutes, then becomes eligible again. Repeated failures retry every 30 minutes after escalation. - The existing counter saturates at the escalation threshold; the new attempt identity and deadline prevent overlapping claims. - No schema, UI, telemetry, lockfile, or workflow change. ## Model Used OpenAI GPT-6 through Codex, using reasoning, repository inspection, code execution, and test tools. The precise backend revision and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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d0b67bfe71 |
feat: queue approvals and answers during active runs (#13539)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Users guide running agents through messages, questions, and approval cards. > - Messages already wait in a queue when an agent is running. > - Card responses did not appear in that queue. Some question answers also steered a later run without a user click. > - A fast approval could invalidate the agent's review handoff and cause it to stop its own run. > - This pull request gives card responses the same queue controls and preserves the exact response during delivery. > - Users can wait for completion or explicitly send the response with Interrupt or Steer. ## Linked Issues or Issue Description Refs #13517, which is merged. This PR targets master and adds queued interaction responses on top of the onboarding changes. Related continuation work: #10519 and #12866. **What happened?** Accepting a proposal while its source run was active left a saved response outside the message queue. The agent could then lose its review path, reassign the task, and cancel itself. Answers to older questions could also steer another active turn without a click. **Expected behavior** Save the response immediately. Queue its continuation behind the active run. Deliver it after completion, or when the user explicitly chooses Interrupt or Steer. Preserve approval revisions and answer choices. **Steps to reproduce** 1. Let an agent publish a confirmation card while its run is still active. 2. Accept the card before the agent finishes its review handoff. 3. Inspect the message queue and the task's next run. **Paperclip version or commit** Reproduced on da8a3876c with the onboarding changes from #13517. **Deployment mode** Local development from source. The fix covers legacy adapters and native Runner turns. ## What Changed - Project resolved cards into the existing queue as immutable responses. Keep answers and exact approval revisions. - Require an explicit click to steer a response into a compatible native turn. Use Interrupt when a fresh session is required. - Preserve typed response context through interruption, cleanup waits, and normal queue promotion. Keep the direct answer channel for a provider blocked on its original question request. - Accept the source run's review handoff after its card resolves. Reject stale agent reassignment that would orphan a queued response. - Add deterministic regression tests and an `accept-while-running` case to the first-task suite. Require recorded timestamp overlap before that case can pass. - Keep the first-task skill name out of user-facing messages. ## Verification - Red-green: the original route failed the queue regression; the changed route passes it. - Focused server/UI tests: 139 passed, including 64 queue-route tests. - Runner harness unit tests: 314 passed. - Server, UI, and Runner E2E typechecks passed. UI token gates passed. - Full repository typecheck and build passed. Server typecheck passed again after review fixes. - Review regressions: 165 queue/reopen route tests, 53 wake admission tests, and 18 run identity tests passed. Approval acknowledgement recovery and both message/approval arrival orders are covered. - Full local test run: 12,401 passed; three new admission regressions ran against a cached pre-fix module. A fresh run of that entire suite passed (53 tests). The complete CI suite passed on the final commit. - Previous-head CI at `c28e2ef12`: 32 checks passed and 2 optional Storybook checks skipped. Every server/workspace/browser shard, Runner verification, build, typecheck/release registry, canary, policy, and security check passed. Greptile: 5/5, no unresolved threads. Earlier interrupted CI workers were replaced by this fresh complete run. - After integrating the updated parent: 314 harness tests, 119 queue/admission tests, 44 onboarding/question-delivery tests, and 13 native recovery tests passed locally. Full repository typecheck and build passed. - Clarified the skill wording preference: routine replies describe the action without announcing the internal skill; direct questions and permission/security/execution disclosures remain truthful. - The paid `accept-while-running` scenario is registered for all four local first-task profiles. It has not been run against a model in this change. - Rebased onto the merged parent at `11921075a`; the resulting tree exactly matches the locally verified integration tree. Final-head CI on `b53054807` passed: 54 successful checks, 2 optional Storybook checks skipped, no failed checks. Every new server/browser shard, aggregate verify/e2e gate, Runner, typecheck, build, canary, and security check passed on the first attempt. Greptile reviewed this exact head at 5/5 with no unresolved threads. ## Risks - Responses now wait instead of implicitly steering another active turn. A provider blocked on the original question still receives its answer directly. - Approval receipts cannot be edited, discarded, or reordered as comments. This preserves the recorded decision. - Interruption must still prove that the prior execution stopped. The tests cover cleanup waits and duplicate delivery. - The new paid overlap case can be unexercised if the model finishes before the click lands. It cannot pass without evidence of overlap. - No database migration is required. This repairs the existing approvals and execution controls; it does not implement the roadmap's work-stream queues. ## Model Used OpenAI GPT-6 through Codex. The exact deployed model ID and context-window size were not exposed in this session. Capabilities used: agentic reasoning, repository inspection, code editing, terminal commands, and test execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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f4cdc7b231 |
fix: recover transient workspace bootstrap scans (#13481)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The control plane prepares task workspaces before it starts an agent. > - Workspace preparation reads Git state so it can preserve edits and exclude private files. > - A failed scan was treated as a non-Git folder and lost its actual failure code. > - The resulting generic setup failure could not recover, even when the cause was temporary. > - This pull request keeps the cause and uses the existing bounded retry schedule before provider startup. > - Tasks can recover without human intervention, while permanent failures and exhausted retries stop with useful guidance. ## Linked Issues or Issue Description **What happened?** A Git scan error during managed repository preparation became `Configured repository folder is not a Git checkout`, followed by generic `setup_failed`. The agent never started. Generic recovery could not distinguish a temporary timeout from a bad workspace configuration. **Expected behavior** Keep the closed scan error code. Retry temporary timeouts and queue saturation under the existing shared budget. Preserve edits, exclusions, ownership, and pause gates. Stop permanent failures and exhausted retries with a specific explanation. Do not replay historical generic setup failures. **Steps to reproduce** 1. Configure a task project with a local Git source that must be copied into its managed repositories. 2. Make the ignored-file scan exceed its timeout before the agent starts. 3. Before this fix, the snapshot returns null and the run ends as non-retryable `setup_failed`. 4. Use the disposable browser fixture in `tests/e2e/workspace-bootstrap/README.md` to inject real timeouts and test the full recovery path. **Paperclip version or commit** Reproduced against `4510bf7c9e2fcbeb043445850928b5dcb79908ca`. **Deployment mode** Built from source. The defect is in core workspace setup, not a specific model provider. Related work: Refs #13442 (managed repository preparation), Refs #11572 (bounded Git scheduler), Refs #12997 (separate adapter startup retry work), Refs #13469 (separate terminal-workspace scan performance work). ## What Changed - Return the non-Git fallback only for repository discovery. Propagate failed scans of a confirmed repository. - Replace full ignored status output with an ignored-only directory listing. Preserve NUL-delimited paths and exclusions. - Preserve typed, sanitized scan errors through workspace preparation and persist pre-provider failure details. - Retry only timeouts and queue saturation, using the existing durable two-retry budget and issue gates. Prevent generic recovery from adding another budget. - Show workspace-specific failure copy and actionable exhausted-recovery notices. - Add red-green unit tests, real-database restart and retry-boundary tests, and opt-in browser acceptance fixtures with real Git subprocess timeouts. - Document the recovery contract and browser verification procedure. ## Verification - Red: injected scan failures returned null instead of rejecting; setup lost the timeout code; task-thread and recovery notices had generic copy. - Green: 119 focused adapter/backend tests, 20 recovery-boundary tests, and 136 task-thread tests. - `pnpm -r typecheck` — passed. - `pnpm build` — passed on the final production code. - `pnpm check:token-gates` — passed. - The initial local `pnpm test:run` overlapped source edits and was interrupted after two late-added assertions saw pre-fix behavior; it is not counted as a green full run. A fresh final-head run passed all 229 tests across the six affected adapter/backend/UI suites. The clean latest-head CI full test matrix passed: all five general-server shards, all five serialized-server shards, and all three general-workspace shards. - Latest-head CI also passed all three browser shards and their aggregate gate, typecheck and release registry, build, runner verification, canary dry run, policy, Docker context integrity, and security gates. Greptile: 5/5, with the review thread resolved. - Browser: created a task in a disposable instance. A real Git timeout scheduled recovery, the next run completed through the run-scoped API without manual Retry, and Done survived reload. The deterministic process worker checked preserved source edits and excluded private files; no model calls were made. - `WORKSPACE_BOOTSTRAP_TEST_URL=<disposable-instance-url> pnpm exec playwright test --config tests/e2e/workspace-bootstrap/playwright.config.ts` — 2 passed (3.6 minutes). The persistent case made exactly three failed attempts, never started the worker, showed the cause-specific notice, stayed stopped for another scheduler tick, and retained Blocked after reload. - Extra red-green coverage: 50 recovery tests passed after fixing an exhausted-bootstrap classification that incorrectly implied unknown provider actions. Missing or uncertain evidence still retains the safety hold. - Verified the documented Git executable override during repository seeding. ## Risks - A confirmed repository scan failure now fails closed instead of falling back to directory sync. This prevents unfiltered copying but makes previously hidden errors visible. - Temporary host problems can create up to two additional setup attempts, 30 seconds apart. Permanent scan errors do not auto-retry. Generic recovery cannot reset this budget. - The durable retry path still enforces ownership, pause, and work eligibility. Integration tests cover restart, duplicate promotion, pause, exhaustion, and non-retryable categories. - No schema migration, new runtime setting, new retry budget, production deployment, or historical task replay. ## Model Used OpenAI Codex, GPT-5-based coding agent, with reasoning, repository tools, shell execution, and browser testing. The exact deployment model ID and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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cceeb0aa66 |
test(runner): add everyday workflow evaluation harness (#13474)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The native runner must support project work, delegation, hiring, and service access. > - Browser tests exposed lost connection access, rejected helper events, and stalled recovery. > - Some eval failures also came from incorrect fixtures and decision controls. > - This pull request fixes those paths and adds eight everyday workflow stories. > - The tests retain observed failures and verify delivered files independently. > - The benefit is repeatable evidence for common user tasks and their remaining gaps. ## Linked Issues or Issue Description Related work: #13404 contains earlier workflow fixes. #13300 and #13470 changed the CI contracts used by the harness security tests. Merged companion: [paperclip-evals#22](https://github.com/paperclipai/paperclip-evals/pull/22). **What happened?** Native ACPX sessions did not receive the assigned connection gateway. Codex helper events could arrive before their spawn receipt and fail thread validation. A parent continuation could take a shared workspace before its child retried. A failed native continuation could leave the task status without a clear recovery blocker. The eval harness also confused tool approvals with new connection requests and could reject a valid delegated download. **Expected behavior** Keep assigned gateway access and its approval checks. Verify helper lineage before accepting helper progress. Let a waiting child proceed before automatic parent recovery. Preserve a failed task's recovery ownership. Grade the actual requested workflow and its delivered files. **Steps to reproduce** Run the everyday workflow suite with the native Codex and Claude profiles. Exercise service approval, connection refusal, delegated project work, and teammate reuse. The commands and case requirements are in `tests/runner-e2e/EVERYDAY-WORKFLOWS.md`. Use `pnpm test:runner-recovery` for controlled crash and replacement cases. ## What Changed - Pass the scoped connection gateway binding through the native ACPX host and sidecar. - Recognize Codex helper lineage from parent metadata and spawn receipts. Verify early helper events with `thread/read`. Keep helper events separate from root completion authority. - Guide agents to use persistent hiring, child tasks, dependency records, and a blocked handoff while waiting for a child. - Defer automatic parent recovery while a child has an active execution path in the same shared workspace. Allow parent recovery when the child needs review. - Record Blocked status and recovery evidence when a failed native continuation needs reconciliation, including existing active or escalated incidents. Preserve their owner and retry budget. - Add eight browser-driven workflow cases. Use real decision controls, explicit child feedback delivery, managed hiring credentials, and independent ZIP checks inside a bounded Docker sandbox. Verify sandbox availability before task creation. Record screenshot SHA-256 at capture. - Keep runner crash probes in controlled recovery tests. Preserve the original failure when cleanup also fails. - Display missing accounting and replay revisions as unavailable. Align harness security assertions with the approved CI changes. - Make the channel-rejection browser fixture bind its file after the send captures its payload. This prevents live refresh from removing the file before the simulated race. ## Verification - Full workspace `pnpm -r typecheck` passed after merging current master. - Runner E2E typecheck passed. Harness unit tests passed: 216/216. - Wake-queue database tests passed: 55/55. The two added existing-incident tests failed before the fix and pass after it. - Docker artifact calibration passed: 12/12. Host-file and host-loopback isolation tests failed before the fix and pass after it. Read-only delivery and output limits are also verified. - Full `pnpm build` passed. Targeted recovery tests passed: 83/83. - The channel-rejection browser test passed five consecutive runs after fixing the fixture race found in CI. - Local general-server (12,351 tests), UI (6,250), CLI (485), and workspace package groups passed. The monolithic run stopped at an unchanged lock-heartbeat fixture race; the isolated workspace group passed on rerun (shared: 747/747). A separate local serialized run passed 97 files before two socket errors in the unchanged issue-list route suite; that suite passed 15/15 on isolated rerun. These local full commands did not finish uninterrupted; the complete CI matrix below covers the remaining suites. - Final head `0fb293733fe307be7e6667ae8f1364077d0c6455`: **34 successful checks, 2 expected skips**, including every server/workspace shard, browser shard, native runner verification, build, and typecheck. [Final CI run](https://github.com/paperclipai/paperclip/actions/runs/34989136700). - Greptile reviewed this exact head at **5/5**; all review threads are resolved. Both Superagent security checks are successful. - ACPX credential-boundary tests passed: 118/118. Superagent accepted the runner/sidecar versus provider-environment trace and cleared its finding. - The latest paid local campaign on source `f6a2fdf7ac2af859826a2ae627ff4125a5478529` passed 22/24 cases: Sol 8/8, Claude 7/8, Mini 7/8. These results predate the merge with current master. - The two remaining failures are in `hire-reuse`: Claude exceeded the attempt deadline during final review; Mini made invalid deliverable tool calls and remained Blocked. - Six Daytona cases were not run because the matching immutable runner image was unavailable. This PR does not claim new remote model results. ## Risks The changes affect connection admission, helper identity, and recovery scheduling. Assigned gateway grants and user approval still govern service calls. The workspace admission gate still exists; the broader folder-sync design is separate work. Provider behavior can still cause the two recorded hiring failures. No database migration is required. Paid cases are opt-in and have bounded attempt deadlines. Project stories now require Docker and the documented pinned Python image on the harness host. ## Model Used OpenAI `gpt-6-astra` performed implementation, diagnosis, and substantive review. OpenAI `gpt-5.6-luna` assisted with verification, PR preparation, and review tracking. Both used repository tools and code execution. Context-window sizes were not recorded. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass (focused checks and isolated reruns; full-run limitations are documented above) - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: OpenAI GPT-5.6 Luna <noreply@openai.com> Co-authored-by: Paperclip <noreply@paperclip.ing> |
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f1d57863d2 |
fix: make connection checks and task handoffs reliable (#13404)
Preserve connection-probe outcomes through cleanup, reduce unrelated startup work, and report selected Claude authentication accurately. Make artifact download actions match their labels. Route delegated feedback through its active child, retain accepted messages across completion, and avoid redundant worker runs for proven closing notes. Preserve explicit follow-ups, human input, company boundaries, source provenance, and mixed issue references. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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4cd7b40255 |
fix: recover new messages after historical native runs stop (#13405)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work.
> - Native recovery must distinguish a fresh user request from replay of
failed work.
> - Older runs can lose their process fields before a local stop receipt
exists.
> - A suspended durable session can still prove that the exact runner
and provider session are idle.
> - The message admission path ignored that evidence and kept new user
messages blocked.
> - This pull request uses the existing exact-state verifier for those
historical runs.
> - The user can start one fresh turn while the old history and unknown
outcomes remain intact.
## Linked Issues or Issue Description
**What happened?**
A user sent a new message after a native run exhausted recovery.
Paperclip saved the message but said the previous run had no verified
stop record. The old runner was suspended, with no active provider turn
or pending output. Its process fields had been cleared before stop
receipts were added.
**Expected behavior**
A new user message starts a fresh turn when the exact retained session
proves it is suspended and the other execution gates pass.
**Steps to reproduce**
1. Retain a failed native run with a terminal controller, cleared
process fields, and no process receipt events.
2. Retain its exact suspended runner state and idle provider state. Keep
its recovery hold.
3. Send a new user comment. Before this fix, admission returns no
successor.
**Paperclip version or commit**
Reproduced on master at
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f2c5e54dca |
fix(runner): preserve handoff work and publish requested files (#13355)
## Thinking Path > - Paperclip lets people manage AI agents and their tasks. > - A task keeps its instructions, progress, and files when its assigned agent changes. > - The replacement runner lost the interrupted run's context and could overwrite an existing draft. > - A saved message also stayed attached to the former agent and could reopen the task after the replacement finished. > - File tasks could report Done with only a local path that the user could not open. > - This pull request transfers handoff context and saved messages, and makes requested files accessible through the existing attachment contract. > - Users can change agents and collect completed work without repeating instructions or confirming bookkeeping. ## Linked Issues or Issue Description Refs #13338. Builds on merged #13354 for queue admission and #13353 for remote workspace retry. #10123 concerns restricted recovery-model escalation; this change instead covers ordinary native handoff and file completion. **What happened?** Codex wrote a draft before a user assigned the task to Claude. The replacement lacked continuation context and replaced the draft. A queued user message could later restart the former agent and reopen the completed task. Separately, a runner could finish a requested file but return only a machine-local path. Remote native runs had no bound file publication tool. **Expected behavior** The replacement reads and preserves existing work, receives saved messages once, and keeps each message's author. The former agent stays stopped. A requested file has a working attachment or accessible work product before Done. Text-only tasks do not require attachments. **Steps to reproduce** 1. Ask Codex to save three newsletter names and then wait. 2. Queue an instruction to keep those names and expand the draft. 3. Use Interrupt and assign to select Claude. 4. Verify the original names survive, the result has a working download, and only the source and replacement runs exist. 5. Ask either provider for a Markdown checklist and open the file from its completed response. ## What Changed - Carry the exact same-task interrupted run's summary, semantic receipts, and history into handoff context. Tell the replacement to inspect existing files before editing. - Adopt saved ordinary task comments into the successor's receipt under the task lock. Preserve authors and separate mention, chat, and interaction contracts. - Prevent a former-assignee comment wake from reopening a completed task or starting a stale execution. - Reject workspace-only, fabricated, and cross-task file completion references with actionable runner feedback. New file output also needs a matching current-run publication receipt and asset filename/size/hash, or an accessible work product registered by the current run. Prior output can remain context alongside a current file, or be verified and re-registered internally. Authorized chat attachment reuse retains its verified current-run clone receipt; older receipt shapes require an intact matching source. - Bind remote file reads to the active environment runner and reuse the existing attachment and work-product publication path. - Enforce workspace confinement, regular single-link files, stable identity, a 10 MiB limit, and exact size and SHA-256 checks. Rotate the native session fingerprint for the updated tool contract. - Contain rejected remote signals and protocol-failure cleanup, including logging failures. Preserve the original cleanup rejection for its owner; a rejected operation never supplies stop acknowledgement or cleanup proof. - Allow exactly one maximum-size base64 file through the native SSH command adapter, preserving a finite output cap. - Document handoff and accessible file completion rules. ## Verification - Each observed bug has a failing regression before its fix. Final post-rebase integration passed 732 tests across 13 files before the final receipt and signal guards; final affected results are below. - Publication provenance and compatibility: 8 provenance regressions and 2 compatibility regressions failed before their fixes; the final four affected suites pass 53 tests, including mixed old/new references and real authorized chat reuse. Controls cover old attachments and work products, filename/size/hash/origin mismatch, missing/wrong receipts, current-run publication, same-run durable proof, internally re-registering preserved bytes, and no-new-file follow-ups. - Remote signal rejection: the real Node subprocess previously exited 1 when the production launcher signalled a deleted sandbox. It now stays alive for both a failed signal and failed logging; all 349 executor tests pass. The failed signal still provides no termination proof. - Remote file reader and SSH command boundary: 33 tests passed, including real Linux descriptor reads and the actual SSH adapter subprocess output cap (network executable replaced by a deterministic fixture). Exact 10 MiB bytes pass, one byte beyond the encoded cap fails. - Live local Claude and Codex Stop journeys preserve the saved file, deliver queued instructions once, and reach Done with two total runs. The handoff journey preserves the original names and download with exactly two runs. Both local providers deliver exact checklist files without a completion confirmation. - Live combined Daytona verification passed: the original failed task's Retry reused its sandbox; a selected Git subfolder produced an exact downloadable file; warm and deliberately resumed Claude runs took about 33 seconds. Codex produced a 240-byte download in 33.1 seconds after 134 seconds of contention/backoff. Both cloud downloads retained exact bytes after the two owned sandboxes were deleted. - The sandbox-deletion retest identified a separate ignored promise in protocol-failure cleanup. Two real Node subprocess regressions failed under fatal unhandled-rejection policy before the fix; all 36 protocol, lifecycle, and integrity tests now pass. The original close promise still rejects to its owning runtime. The final live retest passed: a normal Claude Daytona task completed in 132.352 seconds, then its sandbox was deleted. Thirteen samples over 361 seconds confirmed the same controller stayed healthy, the task stayed Done with unchanged run IDs, and its attachment retained exact bytes. The post-deletion browser download passed with zero page errors; all five owned sandboxes are confirmed absent. - Full repository typecheck and build passed on final commit `de64d16f1`. Final-head Greptile is 5/5 with no unresolved threads. [Final-head CI](https://github.com/paperclipai/paperclip/actions/runs/34736623758) passed: 32 successful checks and two conditional skips. The earlier mixed-source full local test invocation was deliberately stopped before rebase, so no pristine green full local aggregate is claimed. Its known failures passed in later affected suites. ## Risks - Handoff may adopt only ordinary comments from its validated former owner. Other delivery contracts must remain independent. - File verification fails closed if a remote file changes during reading. The runner must retry publication or explain a blocker. - The updated session fingerprint starts a fresh provider process where needed to install the new tool contract. - No schema migration or historical status reconciliation is included. ## Model Used OpenAI `gpt-6-astra` through Codex, with reasoning, code execution, browser testing, and tool use. The context-window size is not exposed in this task. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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c9e3bb7ca4 |
fix: preserve queued work after native Stop and honor steering support (#13354)
## Thinking Path > - Paperclip lets people manage AI agents and their tasks. > - The runner owns execution, while the task keeps user instructions and status. > - Stop must stop the current response without losing instructions that the user already sent. > - The queue stored its original reason inside saved context. Recovery checked the outer deferred reason and left the message waiting. > - Claude also exposed Steer through a shared method even though its driver did not support it. A rejected request could remove its own error row. > - This pull request keeps queued work until execution has stopped, uses the driver's real capability, and preserves completion event order. > - Users can continue work without repairing task state or repeating messages. ## Linked Issues or Issue Description Refs #13338. Related recovery work: #13353. **What happened?** A message sent during a native run stayed queued after Stop. Claude exposed an unsupported Steer action. A steering failure could hide the queued row and its error. A terminal event could also precede the final provider result, and subtree Stop omitted the board actor. **Expected behavior** Stop ends the current execution. Once Paperclip proves that execution has stopped, it delivers the saved instruction once through normal admission. Pause and recovery holds still prevent dispatch. Unsupported controls stay disabled, and a rejected action leaves an actionable error visible. Final results precede terminal events. **Steps to reproduce** 1. Start a Claude or Codex task that writes a file and then waits. 2. Send a follow-up instruction while it runs. 3. Press Stop. Check that the queued instruction runs once and preserves the file. 4. Check Claude's Steer control and simulate a server rejection on the only queued message. ## What Changed - Recover saved native comments after acknowledged Stop using their original wake reason. - Require durable remote termination receipts or verified local process termination before dispatch. - Preserve actor identity, queued-message deduplication, Pause, and recovery gates. - Derive steering support from the driver descriptor and reject unsupported calls. - Keep the queue mounted until a steering request succeeds so its error remains visible. - Emit provider results before terminal events and pass the board actor into subtree Stop. - Document Stop and steering behavior. ## Verification - Final-head continuation suite: 104 passed, after failing regressions for saved wake reasons, cleanup proof, and deduplication of every queued message. Steering UI: 121 passed. Driver capability: 26 passed. Runner backend/transport: 205 passed; Rust library: 285 passed. - Real Claude and Codex browser journeys both preserved the saved file, delivered the queued instruction once after Stop, and reached Done with exactly two total runs. The process Stop browser fixture also passed. - Local full repository typecheck and build passed on `afaa35139`; server typecheck and the affected 104-test suite passed after the final queue changes. Token gates passed. Final-head CI verifies the complete integrated source. - Local aggregate evidence has explicit limits: the general-server invocation overlapped the queue fixes and finished with 11,989 passed, 2 failed, and 80 skipped; both failures are covered by the final 104-test pass. The UI and CLI then passed all 6,184 and 485 tests; the complete 145-file serialized rerun passed all 2470 tests. The shared-package lock fixture passed unchanged on rerun, but the package phase subsequently stopped at an embedded-Postgres bootstrap resource failure. No single pristine green local full aggregate is claimed. - Greptile reviewed `fa66e2bd5` at [5/5 with no unresolved findings](https://github.com/paperclipai/paperclip/pull/13354#issuecomment-5650334242). [Final-head CI completed successfully](https://github.com/paperclipai/paperclip/actions/runs/34733781888/attempts/2): 33 successful checks, 2 conditional skips, including all server, package, UI, browser, runner, typecheck, and build gates. The first attempt hit a preview-readiness/port-collision fixture; its unchanged local control passed 25 tests with 3 skips, and one supported unchanged CI retry passed the affected shard and aggregate gates. ## Risks - Queue recovery must never overlap an old execution. Unknown cleanup state remains blocked. - Driver descriptors are now authoritative for steering; a wrong descriptor disables the action instead of attempting it. - No schema migration or historical status reconciliation is included. ## Model Used OpenAI GPT-6 through Codex, with reasoning, code execution, browser testing, and tool use. The exact hosted model ID and context-window size are not exposed in this task. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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422287eecd |
fix: preserve runner recovery, warm sessions, and task outcomes (#13338)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The native runner connects task messages, provider execution, and task outcomes. > - First-time user tests exposed gaps in recovery, completion permissions, message delivery, and Stop behavior. > - These gaps left usable output hidden, completed work waiting for bookkeeping, or safe work unable to continue. > - This pull request fixes the shared lifecycle and receipt paths while preserving process ownership and action checks. > - Users can continue work with accurate task state and durable messages. ## Linked Issues or Issue Description **What happened?** A stopped local Codex execution could remain blocked even after its processes had stopped and its complete transcript proved that no external action needed replay. Claude under Conservative permissions could fail to call task completion tools. Recovery could reuse an assistant item ID and overwrite prior output. A delivered comment could remain marked uncertain after navigation. Stop could look like Pause or a new recovery incident. Workspace contention could look like cancellation. A direct reply reopening Done could enter a clarification loop. **Expected behavior** Recover automatically only with verified termination and complete action receipts. Preserve answers and messages. Keep task completion available under Conservative permissions without broad tool access. Show crashes as Blocked, actual human decisions as In Review, and ordinary workspace contention as waiting. Stop the current response and allow a new direction. **Steps to reproduce** 1. Create ordinary response tasks with local Codex and Claude Code, then send follow-up messages through the task composer. 2. Interrupt a disposable local Codex runner during text-only work. Verify automatic continuation and retained output. 3. Stop a response, send a new request, answer a clarification, and reopen completed work with another message. 4. Navigate or reload while a comment submission is pending. Confirm the exact persisted request receipt settles it without removing newer draft text. 5. Run two tasks in a shared Daytona workspace. Confirm waiting does not appear as failure. **Paperclip version or commit** Initial acceptance baseline: `c9021c6721f91e2c74bd9fee9d3fd41c999d17b7`. Current integration base: `6cef9743c`. Both operator-interruption and workspace-waiting guards are preserved; native restart and legacy permission rules remain documented. **Deployment mode** An isolated source-built test-drive instance, with real local Codex and Claude Code providers and disposable Daytona environments. Related work: #13314, #13316, #13327, #13344, #13239, #13254, #13163. This PR addresses additional failures from ordinary task journeys, including controller restart handoff and repeated warm sandbox setup. Historical task status reconciliation is excluded. ## What Changed - Persist runner ownership immediately at spawn and resume an explicitly adopted runner even when the controller crashed before the first driver checkpoint. Detach the controller safely across graceful restarts, including session startup. Prevent an old finalizer from suspending or signaling an adopted runner. Checkpoint idle warm sessions before shutdown. Preserve the same run and queued follow-up messages. - Scope saved legacy queue successor checks to the queue owner while preserving ordinary task locks, operator identity, assignment gates, and exactly-once delivery. - Preserve managed Codex credential files when an old session is detached for restart; normal owned cleanup still copies refreshed auth back and removes the scoped copy. - Reuse the bound warm shared sandbox and fully verify an existing staged provider pack before using it. This avoids repeated uploads when the pack is already valid. - Add a narrow local Codex replacement path with stopped-process proof, a closed transcript inventory, exact completion receipts, and fresh-session lineage. Preserve no-replay holds when evidence is incomplete. Recovery may clear only the same run's recorded Blocked status version; manual re-blocking and dependency changes invalidate that receipt, while queued comments do not. Later blocks stop scheduled, queued, and final dispatch; queued/final checks re-read dependencies even when the task status stays In Progress. - Permit only task delivery and human-input tools through the isolated Claude runner's exact task bridge. - Scope assistant item identity to the provider turn and ignore only authority-free Codex skill-change notifications during startup. - Reconcile composer submissions by client request ID across response loss, navigation, and reload. Retain text typed during delivery. - Keep acknowledged run-only Stop neutral and show workspace contention as waiting. Project exhausted native failures as Blocked. - Restore the guarded task-page retry action for failed legacy runs, including the server-supported explicit new-attempt path for stopped conversation adapters. Preserve native/process recovery holds and avoid promising Retry while a decision or execution gate hides it. - Refresh delivered artifacts and handle direct user replies that reopen completed work without a clarification loop. - Check the embedded PostgreSQL PID, data directory, and actual port before connecting or migrating. - Document accepted behavior and add focused regressions at lifecycle, route, transcript, and UI boundaries. ## Verification - Final head `fece606ac2` passes the complete GitHub CI matrix: **34 green checks, two expected Storybook skips, no failures or pending checks**, including `ci / verify`, `ci / e2e`, full runner verification, typecheck, build, every server/workspace shard, and all browser shards. [CI run](https://github.com/paperclipai/paperclip/actions/runs/34727183287). Greptile is **5/5 with no open findings**. The final two commits only refine test fixtures; both affected suites pass 24/24 locally and in CI, with server typecheck green. - Complete local Vitest coverage uses the canonical groups/shards: all 635 general server suites, all 145 serialized suites, and all workspace packages. The aggregate began on `0a8001c18` while the final queue fix arrived: 23,903 passed, five failed, 87 skipped. The five port/socket/timing failures passed unchanged in follow-ups (60 tests in the exposure/file suites and 412 tests covering the serialized failures and unrun tails). The final queue/operator-identity suites separately passed 52/52. This is aggregate coverage plus explicit reruns, not a pristine single-command final-head run. - After integration with current master, queue/operator-identity/continuation suites passed 162/162 and affected UI suites passed 140/140. ACP Stop/continuation and legacy task/Inbox/message browser suites passed 9/9, including both task recovery Retry and thread Try again, automatic saved-message delivery, exactly one new run, Done, and retained output after reload. The default process Stop/Pause/Resume browser case passed (the native-provider case is opt-in and skipped by default). The complete Board attachment/receipt browser suite passed 11/11 on a disposable instance, covering both composers, exact receipts after lost responses, no replay, bound attachments, and newer drafts after reload. - Blocking-intent regressions cover pre-existing Blocked, a mismatched run/cause, an explicit manual re-block, changed dependencies, a queued comment after failure, and a block arriving between scheduling and provider dispatch. The negative cases reproduced before the fix. All 478 affected executor/recovery/dispatch tests passed; both database suites ran separately after availability-probe skips in the first combined command. The final late-dependency check passed all 143 affected recovery/dispatch tests (zero skips) after two new negative cases reproduced the bug. - Focused runtime regressions cover awaited runner ownership publication, authenticated adoption before the first checkpoint, old-finalizer detachment, idle and busy warm-session shutdown, rejected checkpoint propagation, provider-pack verification, and managed-Codex credential preservation. Four managed credential detachment cases reproduced the bug before the fix; normal owned cleanup still succeeds exactly once. - Live local Claude: SIGKILL 2.6 seconds into startup recovered the same run automatically in 53 seconds, then a normal follow-up completed in 24 seconds. SIGTERM 2.5 seconds into startup preserved the same run (54 seconds) and its queued follow-up (21 seconds). Answers remained visible and the task reached Done. - Live Claude Daytona: a warm follow-up retained its sandbox and fell from 121 seconds to 44 seconds. A separate cold turn took 127 seconds; after controller shutdown and checkpointing, its follow-up completed in 33 seconds with the same sandbox, workspace, native session, and runner. Both answers remained visible and the task was Done. - Other live journeys covered task completion and follow-up with local and Daytona Codex, local Codex crash recovery, Stop then new direction, clarification response, live artifact refresh, and shared-workspace waiting. - Validation limits: the opt-in native composer Stop/Pause→subtree Resume fixture exposes terminal/result ordering and subtree-cancellation attribution bugs that can leave a child task blocked; that new finding is assigned to a separate follow-up and is not claimed fixed here. Default CI skips this optional native-provider fixture. Managed-Codex credential handoff and the queue-agent integration use automated regression evidence. Cold custom provider-pack uploads still add startup latency. ## Risks - Automatic replacement remains deliberately narrow: local Codex, verified stopped identities, unchanged retained state, and a complete text/completion-only turn. Unknown actions, partial history, or changed ownership remain blocked. - Claude completion permission handling changes an upstream package patch. The exact isolated task bridge must remain pinned; unrelated tools keep their existing permissions. - New task failure projection changes user-visible status. No historical status backfill or database migration is included. - This is a broad lifecycle fix across server and UI. Live proof covers graceful local Claude restart during startup and idle Claude Daytona session recovery across controller shutdown. Live abrupt SIGKILL during local Claude startup also recovered the same run. Unknown ownership or missing action evidence still blocks reuse. Cold custom provider-pack uploads still add startup latency; this change avoids unnecessary repeat uploads. ## Model Used OpenAI GPT-6 (Codex), with reasoning, code execution, browser automation, and tool use. The exact hosted model ID and context window are not exposed in this task. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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6cef9743c0 |
fix: deliver saved user messages after recovery stops (#13327)
Deliver saved user messages after legacy recovery stops. Validate undelivered comments and queue ownership under the task lock, preserve the operator identity checks from #13315, and prevent duplicate successors. Add a recovery notice with Retry and inline errors, plus service, route, component, and browser coverage. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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df984cbc2c |
fix: dispatch queued legacy messages with operator identity and task permissions (#13315)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Task conversations save messages that arrive during an active turn. > - Legacy adapters deliver these messages in a later turn. > - A run can stop before the saved queue is delivered. > - The Interrupt button previously required an active run, so it could not release this queue. > - This pull request lets a board operator send the saved queue after the run stops and retries queues missed during finalization. > - Manual dispatch must use the clicking operator and must not require permission to create agents. > - The task can continue without a duplicate message or a second execution owner. ## Linked Issues or Issue Description **What happened?** A legacy task retained a queued message after its run stopped. Interrupt was disabled because the queue had no active target. Finalization and deferred message admission can also leave a queue without a successor. **Expected behavior** Interrupt sends the saved messages when no runner is active. Messages that arrive during normal completion are delivered automatically. An uncertain previous execution still requires proof that its process or sandbox stopped. **Steps to reproduce** 1. Queue a user message during a legacy conversation turn. 2. Let the turn stop or simulate a server restart before queue promotion. 3. Open the task with a deferred queue and no active run. 4. Try Interrupt. Before this change, the button is disabled. **Paperclip version or commit** Reproduced against `8f40b4ad4`. **Deployment mode** Legacy conversation adapter. The same persisted queue state is covered with an isolated PostgreSQL fixture. Related public work: #13275 adds active legacy interruption. #13291 addresses automatic sandbox conversation recovery. This change handles explicit saved-queue delivery and late queue promotion. ## What Changed - Accept a null Interrupt target while retaining queue identity, revision, company, and assignee checks. - Save the operator's request on the existing queue. Reuse normal admission after verified stop, including older messages, different authors, and queues whose original wake came from the system. - Strip interruption authority from caller-supplied wake payloads. Only the board queue route can persist that authority. - Retry durable interruption requests after restart and deferred queues after legacy cleanup. - Let an explicit Interrupt retry cleanup for its stopped run, including old ephemeral leases that recorded success without a provider stop receipt. Preserve retained resources, other lease owners, and the automatic retry limit. - Preserve the server's waiting explanation when normalizing and combining queue entries. - Revalidate the consumed board queue receipt at dispatch so a different message author does not cause setup failure. - Use the Interrupt user's execution identity for the new run. Preserve original message authors. Validate the receipt independently at startup and inherit the resulting identity on retry. - Persist authenticated board authority for ordinary manual wakes too. Adopting someone else's queued messages cannot switch a manual run to that author's permissions. Strip caller-supplied authority markers and retain private conversation ownership checks. - Keep the clicking user when a manual wake is merged into an older deferred receipt. Update its requester and payload in the same transaction. - Use the same current-queue/revision API on task details and pipeline conversations; show Interrupt after a legacy target stops. - Keep manual wakes out of active runs, including unscoped agent wakes. They receive their own execution identity; a matching receipt requester is not sufficient because an exact retry can retain a different originating identity. - Authorize both existing-agent wake endpoints with `agent:wake`, available to active non-viewer company members. Keep `agents:create` for hiring. Validate the stored task and current assignee before an exact task retry. - Reject viewer Interrupt requests before saving intent or stopping execution. Keep external chat retry authorization and per-action agent/user permission checks. - Preserve edits and discards until dispatch. Prevent another queue promotion when the same agent already has a successor. Keep independent reviewer recovery available. - Suppress cancelled/failed run toasts for intentional operator interruption. Keep ordinary runtime error notices. - Add UI, route, admission, restart, successor ownership, and toast regression tests. Document the behavior. - Reuse the existing socket reservation helper for both credential-quorum test cases after CI exposed an ambient-port collision. This changes test preparation only; production credential staging is still called exactly once. ## Verification - Failing regression tests reproduced the message-author identity bug and an operator's `agents:create` rejection before the fixes. - All 316 focused tests pass across eight route, queue, identity, authorization, continuation, and responsible-user suites, including the 44-test rerun of queue admission and actual startup after the final manual-wake restriction. Regressions reproduce cross-user merging both with and without a task, and same-requester receipt ambiguity. The cross-company existence guard also passes both tests. - Startup integration tests reach adapter execution under the clicking operator and retain that identity through follow-up. Coverage includes mixed authors, adopted queues, system-origin queues, restarts, forged or stale receipts, viewers, suspended memberships, changed assignees, private conversations, and caller-supplied authority markers. - The earlier queue/cleanup/UI regression suite passed 402 tests. The final review corrections pass another 180 tests across queue admission/persistence, real heartbeat startup, UI API, conversation rendering, and pipeline suites. Regression tests reproduced both review findings before correction. The final head has a 5/5 review with no unresolved threads. Full CI passes on `c2002979c`, including every general and serialized server shard, all browser shards, Paperclip Runner verification, typecheck, build, canary dry run, and the aggregate gates. - Full `pnpm -r typecheck`, `pnpm build`, and UI token gates pass after the final application changes. CI identified an outdated task-page API mock after the shared helper extraction; the fixture now exercises the real helper, and all 131 task-page/API tests pass. The final application build passes with the additional manual-wake restriction. - CI exposed a pre-existing port collision in the Codex credential-quorum fixture. It reproduced locally; both listener cases now use the existing bounded reservation helper. All 41 credential tests pass on rerun. One intervening local run hit a separate ambient bind collision in the two-occupied-port case. - The full local `pnpm test:run` attempt was stopped after host contention caused focused-suite timeouts. The affected focused tests passed on rerun. An expiring trace fixture and a missing private-conversation state were corrected. The successful full CI run is the complete-suite verification. - Hosted Interrupt previously cleared the original queue and produced exactly one successor with neutral interruption feedback. It exposed the dispatch authorization defect. Retry on that earlier build was rejected for missing `agents:create` before creating another run. - Deployed the final application build (`38257f391`) to the scoped hosted instance and verified readiness. The latest PR commit changes only the credential test fixture; application code matches that deployment. A live Retry by the same operator without `agents:create` created one successor attributed to that operator, passing the former dispatch permission gate. Startup then stopped at `configuration_incomplete` because that operator has not configured their required personal Claude Code OAuth secret; the post-deployment run page confirms the operator identity and no provider work started, and the My secrets UI still shows the token as not set. Provider execution remains unverified pending that credential. No permission grants or credentials were changed. ## Risks Queue admission and finalization can race. The task lock, durable queue receipt, current comment IDs, and successor guard prevent duplicate dispatch. Process and lease stop checks, task pauses, approvals, ownership, and budgets remain in force. The API change only allows null on legacy Interrupt; native steering still requires an active run. No schema migration is required. Active non-viewer board members can now invoke existing agents without agent-creation permission. Agent self-invocation rules, raw provider-trace admin access, task retry scope, external chat authorization, and action-specific user/agent permissions remain enforced. ## Model Used OpenAI GPT-6 through Codex. The session does not expose an exact backend model ID or context-window size. Used reasoning, repository search, code execution, tests, and browser tools. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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0e14c61da7 |
fix: fence native startup against cancellation (#13316)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Users can pause a task while its runner prepares to start. > - Cancellation must prevent preparation from creating new execution authority. > - Native runtime selection could run after cancellation and leave an unclaimed recovery coordinator. > - Saved user messages then waited for recovery that had no eligible worker. > - This pull request fences startup and lets explicit user continuation settle verified, unclaimed startup state. > - Tasks can continue after cleanup while keeping provider ownership and execution safeguards. ## Linked Issues or Issue Description Refs #13285 for startup controller leases and #13270 for explicit continuation and saved-message recovery. Related #13293 covers retained processes that actually started; this change covers cancellation before the native provider claim. Related #13315 covers legacy queued-message delivery. **What happened?** Pausing a task during startup could cancel its heartbeat before native runtime selection. Stale preparation then created an observed native coordinator on the cancelled run. The coordinator had no provider result or eligible recovery worker. A later Continue message stayed queued indefinitely. **Expected behavior** Cancellation fences native startup. After verified cleanup, a newer user message starts one fresh conversation turn. An unverified execution keeps its hold and a clear explanation. **Steps to reproduce** 1. Start a task with the native runner and delay startup preparation before runtime selection. 2. Pause the task, then release preparation. 3. Resume the task and send Continue. 4. Before this fix, native selection can persist after cancellation and block the saved message. 5. Repeat from persisted cancelled startup state after a server restart. **Paperclip version or commit** Reproduced against master at `586b5ec82` with isolated PostgreSQL regression fixtures. **Deployment mode** Self-hosted server built from source, with Paperclip Runner. ## What Changed - Serialize the cancellation fence and native runtime selection on the run row. Revalidate the startup controller lease. - Refresh the runtime before dispatching cancellation, and reject terminal or cancelled runs at the native provider claim. - Recognize never-claimed coordinators only after startup and environment cleanup are verified. Reject process, provider, owner, and conflicting launch evidence. - Settle that coordinator atomically with a new authenticated user turn. Preserve history, unknown outcomes, and attempt counts. - Reuse the saved-message worker after restart and retain pause, budget, approval, and ownership gates. - Add startup, restart, duplicate-admission, and negative-proof regressions. Document the rule. ## Verification - All 687 tests pass across the complete heartbeat recovery, explicit continuation, and native session executor suites on the rebased branch. - Six focused race regressions also pass: cancellation before and after native selection, Stop racing adapter registration, process termination during a database failure, and a run finishing during cancellation. - `pnpm -r typecheck` and `pnpm build` pass after rebasing on master at `ab15aff39`. - Greptile is 5/5 on `f3dea2ab27facdf0360b56172ebd3e5219e25538`, with no open review threads. Policy and security checks pass. - All 32 CI checks pass on the final head, including the full server/workspace test matrix, all three browser shards, runner verification, typechecks, build, and canary dry run. The two optional Storybook jobs are skipped. [CI run](https://github.com/paperclipai/paperclip/actions/runs/34697945514). - Local full-suite limitation: the broad `pnpm test:run` attempt reported two failures outside the changed area after unusually long test durations (about 65 seconds for supporting skill-file saves and 933 seconds for setup-token login). Both cases passed isolated reruns, with no code changes. The broad local run was stopped after CI completed successfully; no clean full local-suite pass is claimed. ## Risks Cancellation and startup overlap. The run and coordinator locks provide the authority fence; cleanup and process evidence provide the containment proof. Historical runs without sufficient evidence remain blocked. A saved user message authorizes a fresh turn, not automatic replay. No schema migration or dependency change. ## Model Used OpenAI GPT-6 through Codex, using reasoning, repository inspection, code execution, and tests. This session does not expose the exact backend revision or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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f12b647ae8 |
fix: reliably interrupt and resume legacy message queues (#13275)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - A task can collect more messages while its agent works. > - Legacy runners must stop the active process before they can receive those messages. > - The old Interrupt action cancelled the run but could leave the queue idle and hidden. > - Codex could also classify a cancelled run as successful or start a fresh process after cancellation. > - This pull request joins cancellation, preserves the provider session, and dispatches the current queue after cleanup. > - The benefit is reliable interruption with the saved message order, edits, and deletions. ## Linked Issues or Issue Description **What happened?** Interrupt could strand a legacy message queue. The UI could hide pending messages after the run stopped. A Codex signal exit could race the cancellation write. A stale session warning could also trigger a fresh process after an interrupted resume. **Expected behavior** Interrupt stops the active turn and sends the remaining messages once, in their saved order. Deleted messages stay deleted. An interrupted Codex turn keeps its session and does not restart itself. **Steps to reproduce** 1. Assign a task to a legacy Codex agent that runs a long command. 2. Queue three messages. Edit one, discard another, and move the last message first. 3. Click Interrupt in the queue. 4. Repeat the interruption while the resumed session runs another command. Related work: Refs #13160, which moves native queue steering into the wake-queue module. This change fixes legacy interruption and keeps native steering unchanged. ## What Changed - Add a revision-checked, company-scoped endpoint for legacy queue interruption. - Promote only the requested queue after the provider stops and releases its lease. Retry its persisted interrupt intent from the scheduler after a promotion error or server restart. - Keep pending legacy queues visible after a run stops. Use server state for the interrupt result. - Serialize owned process cancellation before classifying the adapter result. Preserve late session and log metadata. Acknowledge cancellation only when an actual process or process group was owned; scheduler placeholders retain their normal release policy. - Send Ctrl-C to legacy Codex. Prevent missing-session fallback once the session has started. - Add cancellation race, multi-actor queue order, durable retry, resume fallback, and stale request regression tests. Document the behavior. ## Verification - Real browser tests passed with legacy Codex CLI and ACP engines, using Codex 0.153.4 and gpt-5.6-sol. - All three automated ACP browser scenarios passed locally: immediate Interrupt delivery, no replay of an unfinished write, and pause requiring Resume. Updated the old test expectation that required a separate “go” after Interrupt. - Browser tests covered queued edits, deletion, reordering, deleting the final message, and repeated interruption. - Two consecutive CLI interrupts kept one provider session. Both stopped processes exited. The final message arrived once. - `pnpm -r typecheck` passed. - `pnpm check:token-gates` passed. - All 346 post-review scheduling, recovery, queue-route, archived-company, worktree-suppression, and stale-queue regression tests passed. - All 318 process-recovery and durable-chat tests passed after the final cancellation guard. - Codex adapter, queue UI, issue-page, and OpenAPI contract tests passed. - `pnpm build` passed. - Full local suite coverage completed with `PAPERCLIP_IN_WORKTREE=false`, using the stable runner and its CI shards: 618 general server suites, all 145 serialized server suites, and all workspace groups. Every failing suite passed a targeted rerun after the fixes, rebuilding the native test fixture, correcting macOS temporary-path setup, or retrying setup/timing failures. Existing skips remain. - The original monolithic run reported failures before the final fixes; its failed suites were rerun rather than rerunning all 618 suites again. The final process-recovery/durable-chat regression run passed all 318 tests. - All CI checks passed for `e30eaf787f23a5511a3cb3cdb5abbccab9ed001d`: [run 34654820774, attempt 2](https://github.com/paperclipai/paperclip/actions/runs/34654820774/attempts/2), including typecheck, build, all test shards, E2E, and canary. The signoff and Cursor sandbox tests each hit a timeout in the initial attempt; both suites passed locally, and both failed shards passed their single CI rerun. All three corrected ACP browser scenarios passed in CI. - Greptile reviewed `e30eaf787f23a5511a3cb3cdb5abbccab9ed001d`: 5/5, no open review threads. ## Risks Cancellation order affects local adapters. The tests cover signal exits, graceful exits, adapter exceptions, termination errors, and cancellation write errors. Embedded adapters keep their cancellation controls. Ordinary run cancellation and task pause keep their distinct queue policies. No database migration is required. ## Model Used OpenAI Codex, GPT-6, with reasoning, tool use, browser testing, and code execution. The exact serving model ID and context-window size are not exposed in this session. The live test runner used OpenAI gpt-5.6-sol. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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a38ccf9972 |
fix: retry transient continuation admission locks (#13290)
## Thinking Path > - Paperclip manages AI agents and the tasks that they execute. > - The run scheduler checks continuation authority before it starts a provider. > - This check uses database locks to order execution against conversation closure. > - A short lock conflict could fail a valid user follow-up before the provider started. > - This pull request retries the admission transaction after the locks are released. > - Valid work can start after normal contention, while closure and cancellation still stop execution. ## Linked Issues or Issue Description Refs #13038. Related continuation work: #13270 and #13239. **What happened?** A user comment started a run through the automation queue. Its source records and admission marker were valid. A database lock conflict at dispatch caused `chat_control_recovery_proof_unresolved` and stopped automatic recovery. The provider received no work. **Expected behavior** Retry short database lock conflicts before failing admission. Read current ownership and conversation-close evidence on each attempt. Do not retry provider execution. **Steps to reproduce** 1. Queue a user follow-up through the automation transport. 2. Hold the task row lock in a separate transaction at the dispatch boundary. 3. Release the lock after 250 ms. 4. Before this fix, the run fails before provider dispatch. With this fix, the run passes admission once the lock is released. **Paperclip version or commit** Reproduced on base commit `1c4bcff2b`. Disabling the new retry reproduces the original error in the regression test. **Deployment mode** Self-hosted server with PostgreSQL. Regression tests use embedded PostgreSQL. ## What Changed - Retry rolled-back admission transactions after lock conflicts, with up to 50 waits of 100 ms. - Keep queue claims nonblocking. Keep provider dispatch outside the retried transaction. - Recheck current run state and committed close evidence after every conflict. - Explain persistent database contention in the exhausted admission error. - Add real database contention tests and bounded retry tests. Document the behavior. ## Verification - `pnpm exec vitest run server/src/__tests__/heartbeat-process-recovery.test.ts server/src/services/chat-control-admission-retry.test.ts`: 273 passed. This includes task, wake, and run locks, the native runner, close/cancel races, unrelated failures, and retry exhaustion. - Regression proof: disabling retries makes the user-follow-up test fail with `chat_control_recovery_proof_unresolved`. - `pnpm -r typecheck`: passed. - `pnpm build`: passed. - `pnpm test:run`: stopped after all equivalent CI server/workspace shards passed. The local run exposed a missing `fake-codex-app-server` fixture binary in the fresh worktree; after `pnpm --filter @paperclipai/paperclip-runner run build:rust`, the complete affected `native-session-resume.test.ts` suite passes (37 tests). - Greptile: 5/5, no findings, on commit `c974a496a`. - CI: all 31 checks passed on commit `c974a496a`, including all server/workspace test shards, browser tests, typecheck, runner verification, build, and the release dry run. [CI run](https://github.com/paperclipai/paperclip/actions/runs/34654770074). ## Risks - A contended dispatch can wait through 50 short delays, plus transaction time. - Persistent contention still fails closed after the retry budget. Invalid source evidence fails without retrying admission. - No schema, permission, provider retry budget, or queue-claim behavior changes. ## Model Used OpenAI Codex, GPT-6. The exact deployed model ID and context-window size are not exposed in this session. Used reasoning, repository inspection, code editing, and command execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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9031516a7e |
fix: recover legacy Daytona startup failures from task and inbox (#13272)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Legacy conversation adapters can run in Daytona sandboxes. > - A server restart during provisioning can occur before the invocation event exists. > - Recovery then lacks the old adapter identity and leaves a hold that ordinary user retries cannot clear. > - A remote launch can also fail when its host relay looks for Node in the sandbox PATH. > - This pull request records the adapter at claim time and restores explicit user continuation after verified cleanup. > - Users can recover from the task or inbox while the failed run and uncertain action history remain intact. ## Linked Issues or Issue Description Refs #13237, #13239, #13254. Those changes cover recorded conversation runs, native user continuation, and explicit remote Stop. This change covers legacy failure before `adapter.invoke` and exact task/inbox Retry. Refs #9771 for overlapping generated-command quoting. This change also supplies the absolute host Node executable. Refs #13163 and #13264 for the separate native restart and retained-workspace work. **What happened?** A legacy Daytona run interrupted during provisioning became `process_lost` without an invocation event. Recovery preserved an execution hold, and Retry or a new task reply could not resume it. Cleanup could also run before the Daytona plugin was ready. On a macOS host, a subsequent ACP relay launch failed with `env: node: No such file or directory` because the remote launch environment did not contain the host Node path. **Expected behavior** An interrupted conversation can continue after its previous execution stops. Explicit Retry and new user replies should start a fresh turn with the task history. Cleanup failures must remain visible and recoverable. The host relay must use the host Node executable. **Steps to reproduce** 1. Use a legacy Claude adapter with a Daytona environment. 2. Interrupt the server after it acquires the sandbox lease and before it records `adapter.invoke`. 3. Restart and inspect the task hold. 4. Retry from the task or inbox, or send a new task reply. 5. Confirm the old sandbox has stopped and one new response arrives. **Paperclip version or commit** Reproduced from master at `3bafac12f796fbea02e609e1074a9639f872e9c4`. The branch is rebased on `51b0e01ea`, including #13261 and #13270. **Deployment mode** Built from source on macOS with a real Daytona sandbox and the legacy Claude ACP adapter. ## What Changed - Count new browser specs with the scheduler's median duration in the shard-balance check. This fixes a false policy failure after new specs arrive from both branches. The balance threshold is unchanged. - Persist server-owned adapter identity in the queued-to-running claim before provisioning starts. - Wait for provider plugin startup before restart cleanup. Keep failed cleanup leases as active ownership blockers. - Admit exact board retries and new user comments after verified termination. Retain the old run, task history, approvals, and unknown action outcomes. - Adopt repeated Retry requests. Permit one scoped cleanup attempt per explicit user Retry after the automatic limit, with an activity record. A later user Retry can recover after a transient provider failure; automatic attempts remain capped. - Resume replies deferred during cleanup, including historical legacy startup failures. - Launch the host ACP relay through the absolute host Node executable. - Add a task-level Retry button and return actionable blockers when retry admission is refused. - Add database regressions and three browser recovery journeys. Exclude installed third-party dependency skills from the shipped-skill audit. ## Verification - Current head: `d23c84181`, rebased on `51b0e01ea`. Conflict resolution retains the saved-message recovery, local stop receipts, and wait reasons from #13270 alongside exact legacy Retry support. - Real Daytona: interrupted the server after lease acquisition and before adapter invocation. Restart cleanup confirmed provider termination. Task Retry cleared a seeded historical hold and a real Claude agent returned `Recovery verified.` in the task. Removed the disposable sandbox and environment after testing. - All three browser recovery journeys passed again after the final rebase. Task Retry, Inbox Retry, and a new reply each produced one fresh successor, completed the task, preserved the failed run, and retained the answer after reload. - All 29 e2e/server shard-partition tests passed. The balance check now uses the scheduler's median fallback for unmeasured specs, with the same balance threshold. - Server typecheck passed after rebuilding the generated runner dependencies. The combined recovery/route run passed 136 of 137 tests. Its remaining route test timed out during the first cold module import at its explicit 10-second limit; an isolated rerun reproduced that timeout and passed the other 51 route cases. The complete CI suite passed on this head. The same route file passed all 52 cases in CI, including the first cold import in 7.5 seconds. - Before the final rebase, recursive typecheck, full build, UI token gates, 132 targeted server tests, and the complete [CI workflow](https://github.com/paperclipai/paperclip/actions/runs/34650004085) passed. The subsequent CI failure was the shard-balance accounting mismatch fixed here. - Greptile reviewed `d23c84181` at 5/5 with no outstanding actionable findings. The complete [current CI workflow](https://github.com/paperclipai/paperclip/actions/runs/34653327949) passed on attempt 2. All test, typecheck, build, and canary jobs passed on the first attempt. Docker setup timed out fetching BuildKit from Docker Hub; retrying that job and its dependent aggregate succeeded. ## Risks - Recovery admission changes executable authority. Company, task, agent, user, approvals, process ownership, and provider termination checks remain required. - Explicit continuation starts a fresh conversation with history. It does not certify unknown external action outcomes or rerun non-conversation adapters automatically. - Changing task status alone does not clear an execution hold. The task now offers an explicit Retry action. - Historical adapter claims and invocation events take precedence over current agent settings. Known process or webhook runs retain their hold. Pre-upgrade rows with no adapter evidence may receive only a new explicit user turn after termination proof; they do not become eligible for automatic replay. - No schema migration or sandbox-image change is required. This branch has not been deployed to production. ## Model Used OpenAI GPT-6 through Codex, with repository inspection, code execution, browser automation, and test execution. The exact deployment model ID and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [ ] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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51b0e01ead |
fix: resume saved user messages after execution recovery (#13270)
Preserve verified native process-stop evidence and retry saved user messages through normal continuation admission after recovery cleanup. Show the current wait reason and serialize delivery so a saved message starts one fresh turn. Validated with 410 focused tests, typecheck, build, token gates, all PR CI checks, and Greptile 5/5. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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3bafac12f7 |
refactor: remove automatic productivity reviews (#13263)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Its recovery loop keeps assigned work moving after execution failures. > - Productivity review used run counts, comment counts, and elapsed time to create management tasks. > - Infrastructure failures could satisfy those rules and create more tasks without evidence that the source work needed management review. > - This pull request removes that detector and its continuation holds. > - Bounded recovery, budgets, explicit blockers, and normal review stages remain in place. > - Existing task records stay readable and unchanged. ## Linked Issues or Issue Description Refs #5897. That request describes unwanted automatic productivity reviews and asks to preserve existing tasks. This change retires the feature instead of adding another configuration switch. Related prior approaches: Refs #9191, Refs #12489. Those changes excluded infrastructure failures or bounded review creation. This removal replaces the detector rather than tuning its thresholds. ## What Changed - Delete the scheduled detector, automatic task creation, evidence refresh, and productivity continuation holds. - Remove computed productivity fields, special attention items, badges, and Storybook fixtures. - Retain historical origin values, decision compatibility, and recovery recursion exclusions. Add no migration and change no existing task data. - Update the execution contract. Replace feature tests with regressions for legacy task reads, ordinary attention, and bounded continuation in the presence of an old review. ## Verification - Targeted attention, issue-route, startup, and UI tests: 4 files and 101 tests passed. - Updated issue-route and UI tests: 2 files and 61 tests passed. - Bounded continuation regression: 2 cases passed, including a legacy review plus pre-dispatch cancellation churn. - `pnpm check:token-gates`: all four gates passed. - `git diff --check`: passed. - `pnpm build-storybook`: passed. - Greptile: 5/5 on `a5a612eea`, with no actionable findings. - Scheduler and historical recovery regressions: 2 files and 28 tests passed. - Repository `pnpm -r typecheck` and `pnpm build`: passed. - The complete `pnpm test:run` suite passed across the CI server, serialized-server, and workspace shards on `a5a612eea`. Stopped the duplicate local monolithic run after the full CI suite passed; no completed local full-suite result is claimed. The targeted local suites above passed. - CI serialized shard 5 initially hit a 10-second timeout in the first interaction-route test. The complete file passed locally (78 tests), then the single CI rerun passed. - All CI gates are green, including the build and end-to-end suites. - A local merge check against current `master` (`ce09ea40b`) completed without conflicts. ## Risks - API responses no longer include the computed `productivityReview` field. Consumers must stop using it. - The scheduler no longer creates management work from elapsed time, run counts, or missing comments. This is the intended behavior change. - Existing review tasks and explicit dependencies remain in place. Historical origins still prevent recursive recovery treatment. No task cleanup or data migration occurs. - The native review handoff repair is separate from this removal. ## Model Used OpenAI GPT-6 through Codex, with reasoning, tool use, and code execution. The exact runtime model identifier and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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663c44cb2b |
fix: continue conversations after confirmed remote runner stop (#13254)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work.
> - Users can stop a run and send another message on the same task.
> - Remote runners need evidence from their sandbox provider that
execution stopped.
> - Local process checks cannot prove that a remote process exited.
> - This pull request records provider stop receipts and uses them for
conversation admission.
> - New user messages can proceed after confirmed cleanup without
repeating interrupted actions.
## Linked Issues or Issue Description
Refs #13237 and #13239. Related: #13163 covers app-restart recovery;
this change covers an explicit stop followed by a new user message.
**What happened?**
A stopped remote Claude ACP task kept its execution hold after Daytona
cleanup succeeded. Native runners also rejected remote process
identities and retained stale session cleanup gates. A message sent
during cleanup could stay deferred after the sandbox stopped.
**Expected behavior**
After the provider confirms that the old execution stopped, a new user
message starts a fresh turn. Pending user messages must not need another
message to trigger admission. Prior action outcomes remain recorded.
**Steps to reproduce**
1. Start a long-running task in Daytona with a legacy Claude ACP or
native ACP runner.
2. Cancel the run while its tool is active.
3. Send a new message immediately, or after cleanup completes.
4. Observe the execution hold despite the old sandbox having stopped.
**Paperclip version or commit**
Reproduced on master at
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2904a3a6cc |
fix(ui): hide retry countdown after execution starts (#13258)
## Thinking Path
> - Paperclip helps operators manage AI agents and their tasks.
> - Task pages show countdowns for deferred checks and automatic
retries.
> - A retry keeps its scheduled start time after it enters the queue or
starts running.
> - The countdown treated that historical time as a pending deadline and
showed an overdue warning beside active work.
> - This pull request limits retry countdowns to retries that are still
scheduled and hides waiting surfaces on terminal tasks.
> - Operators now see a warning only when the displayed retry is still
waiting to start.
## Linked Issues or Issue Description
Refs #9783, which added the monitor surfaces. Searched related PRs and
issues; no duplicate fix was found.
**What happened?**
After a service restart resumed a task through an automatic retry, the
task showed an overdue retry banner while the agent was running. The
banner also remained when the task became done.
**Expected behavior**
A queued or running retry must not show a countdown against its past
scheduled start time. Done and cancelled tasks must not show waiting
banners.
**Steps to reproduce**
1. Open a task with an automatic retry scheduled for a known time.
2. Let the retry enter the queue and start running.
3. Wait until its scheduled time is more than one minute in the past.
4. Observe the overdue banner and Check now button while the agent is
working.
**Paperclip version or commit**
Reproduced on source commit
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5545f6d166 |
feat: let user messages continue stopped native tasks (#13239)
## Thinking Path > - Paperclip manages AI agents and their tasks. > - A failed native run can leave a durable execution hold. > - The hold prevents automatic replay of actions with unknown outcomes. > - It can also prevent the agent from answering a new user message. > - A new user message should authorize a fresh turn after the prior execution stops. > - This pull request adds that admission path and preserves the existing execution gates. > - Users can continue the conversation without certifying every past action. ## Linked Issues or Issue Description **Subsystem affected** Server task wake admission and native execution recovery. **Problem or motivation** A native task can remain blocked after automatic recovery stops. A new user message is saved, but its run is cancelled before the agent can answer. **Proposed solution** Use a new authenticated user comment to authorize a fresh turn. Check stopped predecessor ownership and available history. Retain uncertain action outcomes. Commit the new run and hold retirement together. **Roadmap alignment** This is a focused improvement to the existing self-healing runs and recovery behavior. Builds on merged #13237, which covers legacy conversation continuation. This PR adds native admission and preserves native automatic-recovery eligibility and budgets. ## What Changed - Admit a fresh native turn for a new user comment after every held predecessor has stopped. - Validate the comment author, task, timing, process ownership, controller, and cleanup leases. - Preserve failed runs, unknown action outcomes, and the failed incident's attempt count. - Record the new comment and run in the existing recovery audit history. - Validate the saved continuation source and discard consumed user-wake authority from later automatic replacements. - Keep pause, approval, budget, ownership, and dependency interaction rules. - Add database and actual wake-path regressions. Update the execution contract. ## Verification - [Full CI run 34626750213](https://github.com/paperclipai/paperclip/actions/runs/34626750213) passed on `c58e6c087e0df7530c747d80b27d491da925a9c4`: all 31 reported checks passed, including all server/workspace suites, browser shards, native runner verification, build, typecheck, release dry run, and aggregate gates. The two conditional Storybook checks were skipped. - Greptile reviewed this exact head at 5/5. All review threads are resolved, and security checks passed. - All 218 local targeted tests passed across explicit native continuation, continuation history, safe replacement, durable chat wakeups, wake queue, issue liveness, native session resume, and run dispatch. The native implementation is unchanged by the final rebase onto master. - Full workspace `pnpm -r typecheck` and `pnpm build` passed on the final head. Complete test coverage is supplied by the green CI suites; local tests used the targeted suites above. - Regressions cover scoped authorization, concurrent delivery, live ownership, later admission gates, retained message receipts, and automatic replacement after terminal-task or reviewer changes. ## Risks - A fresh model turn can choose to repeat an action. Paperclip preserves prior history and does not replay recorded calls. - Missing process identity and remote ownership without a target-aware stop proof retain the hold. A terminal database row alone does not prove that execution stopped. - No schema or dependency changes. Existing historical tasks are not awakened by deployment. ## Model Used OpenAI GPT-6 through Codex, with reasoning, repository tools, code execution, and test execution. This session does not expose a more specific model build ID or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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b1efd65edc |
fix: continue interrupted task conversations with bounded retries (#13237)
## Thinking Path > - Paperclip manages AI agents and their tasks. > - A task can outlive a provider process or a server restart. > - Legacy recovery treated unknown tool outcomes as a permanent execution hold. > - That hold could also reject a later user message. > - A conversation turn can use prior history without replaying prior tool calls. > - This pull request lets supported conversation adapters continue within the existing retry budget. > - Users can send a new message after automatic attempts stop. ## Linked Issues or Issue Description **What happened?** A server restart could interrupt a local ACP run and leave its task behind a permanent recovery hold. A later user message could be cancelled before the provider answered. The immediate recovery path could also create a successor outside the durable failure counter. **Expected behavior** Continue with a bounded new conversation turn. Preserve a compatible provider session or use full task context when it is unavailable. Do not replay recorded tools. When automatic attempts stop, allow a new user request through the normal execution gates. **Steps to reproduce** 1. Start a task with a local conversation adapter. 2. Restart the server while the provider is working. 3. Let the previous run become interrupted. 4. Send a follow-up message and observe the recovery hold on the old behavior. Related work: Refs #13075 for durable task recovery. Refs #12946 for retry-limit and checkout-lock handling. This change routes conversation recovery through the existing bounded scheduler. ## What Changed - Mark supported local conversation failures for continuation. Keep native-runner and non-conversation recovery rules. - Carry an interruption notice into the next turn. Retain stopped ACP session history even when a write outcome is unknown. - Clear unavailable ACP sessions so the next bounded attempt can use full task context. - Route immediate failure recovery through the same durable scheduler as process-loss recovery. Release only the predecessor checkout when its retry takes ownership. - Retire obsolete conversation holds using immutable run evidence, in bounded batches with an activity record. Preserve outcome evidence and do not wake historical tasks. - Block actual admission and Resume while a predecessor process or environment lease is still active. Keep the original interruption notice after a rejected wake. Preserve the upstream blocked-wake waiting contract: bounded retry planning can happen during cleanup, while deferred messages and execution remain gated. - Add subprocess and database regression tests. Update the execution contract. - Add the current thread-status field to the native recovery provider fixture so its damaged-journal test reaches the intended boundary. Tolerate an already-exited fixture process during test cleanup while still asserting both processes terminate. ## Verification - Workspace typecheck passed: `pnpm -r typecheck`. - Build passed: `pnpm build`. - Module boundaries passed: `pnpm check:module-boundaries`. - Focused tests passed: 293 recovery/session/dispatch tests, 66 retry and response-gate tests, and 37 native-session tests. Some suites overlap. - Tests cover interrupted writes, missing sessions, concurrent retries, restart persistence, pending questions and approvals, execution gates, and historical holds. - Built the Rust test executables with `pnpm --filter @paperclipai/paperclip-runner build:rust` for native-runner verification. - Full Vitest coverage verified locally using the repository’s general and serialized shards, with focused reruns for failures and files not reached after a shard stopped. The ownership-gate regression is fixed and the complete affected server shard passes (1,390 tests). Local parallel runs also hit temporary-directory, resource, and timing failures; those suites pass with canonical temporary paths and sequential reruns. No test timeouts were increased. - Final merged-branch regression run: 577 tests pass across process recovery, retry scheduling, liveness, durable chat, wake-queue application/adapter, dispatch, continuation, native sessions, and task chat. Earlier focused verification also passed 19 native control tests. Token gates and whitespace validation pass. - Browser verification passed all three ACP Stop/continue/pause scenarios, including a rerun after merging the upstream waiting behavior: `PAPERCLIP_E2E_PORT=3397 pnpm test:e2e tests/e2e/acp-stop-continuation.spec.ts`. The interrupted-write case verifies that follow-up completes without a repeated write. - Final-head [CI run 34625037394](https://github.com/paperclipai/paperclip/actions/runs/34625037394) passed on `06ac4bd9d150f8b209a96e5fd609c696958794a0`: all 31 reported checks are green, including server/workspace suites, all browser shards, native runner verification, build, typecheck, release dry run, and aggregate gates. The two conditional Storybook checks were skipped. Greptile reviewed this exact commit at 5/5; all review threads are resolved. ## Risks - A new model turn can choose to repeat an action. Paperclip does not replay recorded tool calls and does not certify unknown action outcomes. - Conversation adapters now stop after their retry budget instead of requiring action reconciliation. Explicit Stop, pause, dependency, approval, budget, and ownership gates remain in force. - No schema migration or dependency changes. Historical holds are folded without changing task status or waking work. ## Model Used OpenAI GPT-6 through Codex, with reasoning, repository tools, code execution, and test execution. The session does not expose a more specific model build ID or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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eb640ec129 |
fix(execution): keep blocked wakes waiting without repeated runs (#13236)
## Thinking Path > - Paperclip manages AI agents and their work. > - Wake admission decides when a task can create an execution run. > - Recovery can prohibit replay while the previous execution needs review. > - Dependency reconciliation kept creating runs before dispatch rejected that same hold. > - Each rejected run added another startup notice without doing useful work. > - This change checks the hold during admission and records repeated automatic waits once. > - Tasks keep their messages and can resume when the current gates permit execution. ## Linked Issues or Issue Description Related changes: Refs #13173 (stale completed-task continuations). Refs #12651 (dependency waits during recovery). **What happened?** A blocked task with completed dependencies can remain under a durable execution reconciliation hold. Each scheduler pass created a queued run. Dispatch then cancelled it before the adapter started. The skipped wake did not satisfy dependency wake deduplication, so this repeated and filled the conversation with “Couldn't start” notices. **Expected behavior** A known execution hold creates a waiting diagnostic without a run. Repeated automatic observations share that diagnostic. Clearing the hold permits a new wake only after the other gates pass. New comments remain available for the next eligible execution. **Steps to reproduce** 1. Assign a blocked task with a completed blocker. 2. Give the task an active reconciliation action, or a resolved action whose automatic recovery evidence still prohibits replay. 3. Run dependency reconciliation repeatedly. 4. Observe repeated cancelled pre-start runs on the base branch. This branch creates no runs while held and admits work after the effective hold clears. ## What Changed - Check effective execution holds under the issue admission lock before inserting runs. Keep the final dispatch check for races. - Share automatic wait diagnostics across producers, wake keys, and service restarts. Apply the helper to reconciliation, dependencies, pause holds, availability, budgets, and disabled heartbeats. - Preserve ordinary comment and interaction receipts during execution holds. Prevent release from draining them while replay is blocked. Keep external-chat receipt authorization intact. - Group empty pre-start reconciliation cancellations into a neutral waiting notice. Keep started runs and the full run history. - Document the waiting contract and add database-backed, UI, and browser regressions. - Stabilize two existing verification tests: allow the asynchronous chat lease transition a bounded five-second wait, and accept either legitimate damaged-session refusal while retaining exact archive-evidence assertions. ## Verification Passed targeted tests: - `pnpm exec vitest run server/src/__tests__/heartbeat-issue-liveness-escalation.test.ts server/src/modules/wake-queue/adapters/postgres.test.ts` — 28 tests. - `pnpm exec vitest run ui/src/components/TaskChatThread.test.tsx` — covered in the initial combined test run; UI suite passed. - Run-dispatch adapter tests passed in the combined gate regression run. - `pnpm exec vitest run server/src/__tests__/durable-chat-wakeup.test.ts` — 41 tests, including held receipt replay, promotion, and revoked access. - `PAPERCLIP_E2E_PORT=3294 pnpm test:e2e tests/e2e/acp-stop-continuation.spec.ts` — all 3 browser scenarios pass. Repeated held messages create no additional runs or provider prompts and do not replay writes. - `pnpm check:token-gates` - `pnpm check:module-boundaries` - `git diff --check` `pnpm -r typecheck` and `pnpm build` pass. The full local `pnpm test:run` invocation did not finish green: it encountered exhausted local PostgreSQL shared-memory slots, a missing fresh-worktree runner test binary, and tests loaded across in-flight edits. The affected chat/database suites passed on rerun (81 tests), and the targeted lifecycle/recovery verification passed (3 tests). After building the runner test binary, the full native session suite also passed (37 tests). Final-head [CI run 34621288475](https://github.com/paperclipai/paperclip/actions/runs/34621288475) passed on `8659618b0ed2b98df002a28f4c1bd97321b0db04`, including all server/workspace test shards, all three browser shards, runner verification, typecheck, build, release dry run, and the aggregate verification gates. All 31 reported checks passed; the two conditional Storybook checks were skipped as intended. Greptile reviewed that exact commit at 5/5 with no unresolved review threads. ## Risks The wait record is diagnostic only. It must never count as a delivered wake or bypass a current gate. Tests cover repeated and concurrent admission, resolved no-replay evidence, a remaining dependency after hold clearance, deferred comments, and release gating. Explicit user requests and authorized chat receipts do not share automatic diagnostics. No migration or historical data deletion is required. Existing provider retry budgets remain unchanged. ## Model Used OpenAI GPT-6 through Codex. The runtime does not expose the exact hosted snapshot ID or context-window size. Used repository inspection, code editing, command execution, tests, and review tools. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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1d26ae965e |
fix(ui): keep active runner status current and say Working (#13238)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work.
> - The task transcript shows a running agent's progress.
> - The active-run query stops polling when the live-run list has data.
> - The transcript still preferred that initial snapshot, so an old
execution-confirmation state could remain after work resumed.
> - This pull request uses the refreshed snapshot for the same run and
keeps active status text at Working.
> - Operators can see current activity without connection-state jargon.
## Linked Issues or Issue Description
**What happened?**
The task transcript said Reconnecting while the runner continued sending
messages and calling tools. The stale projection could also hide the
Thinking tail or stop the status spinner and timer.
**Expected behavior**
The selected run uses its current live snapshot. Active transcripts say
Working and show current activity. Completed and failed runs say Worked
and Stopped.
**Steps to reproduce**
1. Open a running task before its execution confirmation arrives.
2. Let the active-run query stop polling when the live-run list returns
the run.
3. Let the list refresh to working while the cached active-run snapshot
still says reconnecting.
4. Inspect the transcript status and activity tail.
**Paperclip version or commit**
Base commit:
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d10cbde815 |
fix(recovery): reject stale productive continuation wakes (#13173)
## Thinking Path > - Paperclip manages agent work through tasks and runs. > - Recovery continues assigned work when no live execution path remains. > - A recovery sweep can read an in-progress task before its run completes. > - The sweep can then observe the successful run after completion has changed the task status. > - This pull request checks current status and assignment under the existing enqueue lock. > - A stale continuation leaves a skipped wake receipt and creates no run. > - Task chat also omits an empty continuation cancelled before it started because its task had become terminal. ## Linked Issues or Issue Description Related public work: #10779 and #8419. Those older open changes address terminal disposition across other recovery paths. This change uses the existing scheduler guard for productive successful-run continuation and adds real database lock contention coverage. **What happened?** Recovery could combine an old in-progress task snapshot with a newer successful run. It queued an automatic continuation after the task was done. Dispatch cancelled that run before it started, but task chat displayed “Couldn't start” below the successful answer. This can happen after the native runner's finish result has already been accepted. It does not require a missing comment. **Expected behavior** Productive continuation must remain eligible when enqueueing acquires the task lock. Completion, cancellation, reassignment, or a move away from in-progress must prevent creation of the run. Actual execution stops must remain visible. **Steps to reproduce** 1. Let recovery select an assigned in-progress task whose latest run succeeded with productive progress. 2. Hold the task row lock in another transaction and change the task to done. 3. Let recovery attempt to enqueue while that transaction holds the lock. 4. Commit completion. Before this fix, recovery creates a redundant run from the stale snapshot. **Paperclip version or commit** Reproduced against master at `4042eb1c4` with deterministic integration tests. **Deployment mode** Built from source with PostgreSQL. The bug is in core recovery and is not adapter-specific. ## What Changed - Pass the existing status-and-assignee guard for productive terminal continuation recovery. - Preserve a skipped wake receipt with the expected and actual task state, without creating a run. - Test actual PostgreSQL lock contention for native and legacy completion, cancellation, backlog, review, blocked state, and reassignment. - Omit empty redundant pre-start cancellations from native and legacy task chat. Preserve stop markers for runs that started. - Document recovery eligibility at enqueue time. ## Verification - All seven new race cases failed before the guard was connected. - `pnpm -r typecheck` passed. - `pnpm build` passed. - `pnpm check:token-gates` passed. - Task chat suite: 98 tests passed. - Recovery integration suites: 290 tests passed, including 31 stale-queue tests. - Full CI verification passed on `7ea71f04d`: all 31 active checks succeeded, including all test shards, browser tests, build, typecheck, and canary release dry run. Storybook visual regression was skipped by its path filter. - Greptile reviewed this commit at 5/5 with no review threads. - The local `pnpm test:run` aggregate reported a setup failure in the unchanged `tool-access-service.test.ts` suite. Its isolated rerun passed all 231 tests without edits. The duplicate aggregate was stopped after the complete CI matrix passed; it is not counted as a successful local full-suite run. ## Risks Low risk. The backend guard applies only to productive successful-run recovery. It requires the task to remain in-progress with the same agent. Other wake sources keep their current policy. The UI change only suppresses empty redundant cancellations; run records remain available. No schema change or migration is required. ## Model Used OpenAI GPT-6 through Codex, with reasoning, repository inspection, code edits, and local test execution. The exact deployment snapshot and context window are not exposed by this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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018ca5daaf |
fix: verify ACP Stop and preserve safe continuation (#13119)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Task controls coordinate provider execution and queued user messages. > - Stop could finish before an embedded ACP provider stopped its tools. > - A later request could be held for reconciliation without a clear task response. > - A restored provider could also retain the stopped run's API credential. > - This pull request verifies provider termination and preserves safe session continuation. > - Operators can continue known-safe work and see why uncertain work cannot start. ## Linked Issues or Issue Description **What happened?** Stop could leave an embedded ACP provider running. A queued follow-up followed by “go” could fail before it reached the provider. Task chat could show a generic missing-response message. Even a restored session could use the previous run's credential and fail its task update. **Expected behavior** Stop waits for confirmed provider termination. A later explicit wake continues the same compatible session only when recorded actions have known outcomes. It carries pending comments and the current run's environment. Uncertain actions retain a visible reconciliation hold. Composer Stop preserves the existing pause rule: conversation can continue while paused, but task work requires Resume. **Steps to reproduce** 1. Start an embedded ACP task. 2. Send a second request while the provider is running. 3. Interrupt the run, then send “go”. Also test composer Stop followed by Resume work. 4. Check that the request is delivered once and that the provider can complete the task through the current run's API credential. 5. Repeat with an unfinished write. Confirm that the write stops and that further execution stays blocked with a visible reason. **Paperclip version or commit** Built from source on master at `3bc60dd8b` plus this branch. **Deployment mode** Local source build with an isolated embedded PostgreSQL instance. Refs #11183. Refs #12552. Those changes address recovery after operator cancellation. This change also covers embedded ACP termination, session proof, pending-comment delivery, and task feedback. ## What Changed - Propagate Stop into embedded ACP and wait for bounded adapter cleanup and provider exit. Retain the actual ChildProcess object for forced termination on all platforms; never signal a recycled numeric PID. - Preserve interrupted checkpoints only for acknowledged, local, persistent sessions with settled reads or no tools. Keep writes, incomplete actions, and forced termination blocked. - Restore the same compatible provider session with the current run's environment. Reject fresh-session fallback for an interrupted checkpoint. - Adopt pending comments on the next explicit wake. Stop alone does not dispatch them. - Share the execution-blocker rule across dispatch, Resume, and task detail. Show Stopped or Couldn't start with the recorded reason. Resolve the stopped agent for the run link, including reviewer runs. - Keep execution reconciliation holds intact when generic recovery sees queued comments or healthy child tasks. - Add process, service, component, and browser regression coverage. Fix disposable database cleanup and React test settling exposed by the full suite. ## Verification - Passed `pnpm -r typecheck`, `pnpm build`, and `pnpm check:token-gates`. - Passed all three `acp-stop-continuation.spec.ts` browser journeys. They use an actual ACP child process and require task completion through the agent API. - Passed 165 adapter execution, operator-stop, and child-process control tests, 17 queued-comment route tests, and 65 tests in the two adjusted UI suites. Earlier focused recovery, heartbeat, and task-control tests also passed. - Manually used the browser to queue a request, Stop, send “go” while paused, and Resume. The same session answered once and moved the task to Done with the current run's credential. - Manually interrupted an unfinished write. Its file size stayed fixed for five seconds. “Go” showed the reconciliation reason and did not start another provider prompt. - Separate live Claude ACP smoke checks confirmed that Stop ended a disposable local write and that a no-tool interruption could resume the exact provider session. The browser fixture does not call Drive or another external app. - Passed all 5,615 UI tests and 3,090 other workspace tests. The CLI and general server groups pass with targeted retries: two transient server failures passed together on retry, and two embedded-database startup failures passed after removing abandoned shared-memory segments from this task's completed browser fixtures. All 144 serialized server suites completed, with 2,189 tests passing after two transient HTTP socket failures passed on retry. - Passed all 135 heartbeat process/recovery tests, including a deterministic regression that failed before the recovery-sweep fix. - Passed 18 dispatch integration tests, including stopped-reviewer links, company boundaries, and malformed run IDs. - Greptile is 5/5 on `7dd170d83`, with zero unresolved review threads. The security scan and all required CI gates pass for the same commit. ## Risks - Safe continuation depends on complete tool reporting and a restorable local provider session. Unknown outcomes remain blocked and require reconciliation. - Provider cleanup can take time. A timeout does not grant replay permission. - The change adds optional adapter context fields and an optional issue projection. It does not change the database schema or require a migration. - Test cleanup truncates company data only in a disposable test database. ## Model Used OpenAI GPT-6, running as Codex with repository tools, code execution, and browser interaction. The runtime does not expose a more specific model deployment ID or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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3b550c80fa |
fix(codex): correct startup trust, history reads, and resume usage (#13110)
## Thinking Path
> - Paperclip runs Codex locally and in remote sandboxes.
> - The runner must preserve startup configuration and session identity.
> - Missing project trust can disable repository configuration.
> - Full-history requests use deprecated provider fields.
> - Resume usage describes old work and must not become new run usage.
> - This change corrects startup trust, state reads, and usage
classification.
## Linked Issues or Issue Description
**What happened?**
Normal Codex runs could show repository-trust and history-deprecation
warnings.
Resume could report the preceding turn's token snapshot as a late-turn
warning.
The historical last-usage value could also be attributed to the new run.
**Expected behavior**
Trust the server-selected startup root in isolated configuration. Read
lightweight
provider state and paginated evidence. Use historical cumulative usage
as a
baseline without a new charge or user-facing warning.
**Steps to reproduce**
1. Start a native Codex task in a selected repository.
2. Finish the turn and resume the provider thread.
3. Inspect provider notices, history requests, and per-run usage.
4. Repeat startup and cold resume inside a Daytona sandbox.
**Paperclip version or commit**
Codex CLI 0.153.4 is the pinned runtime and reproduced baseline.
Replayed onto master at
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ca96e1eb0a |
fix(runner): keep streaming after task completion tools (#13108)
Keep receiving provider events after paperclip_finish, drain pending event persistence, and select the final assistant answer after the provider turn ends. Preserve cancellation, failure, and governed-wait behavior. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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35fdc0c66b |
fix: make task recovery durable and preserve current requests (#13075)
Make task recovery durable and preserve the latest user request across native and legacy continuations. Keep routine recovery quiet and prevent replay when action outcomes are uncertain. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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4b6de5327e |
Remove cheap model profiles (#12683)
## Thinking Path > - Paperclip manages agents that use different model providers and adapters. > - Paperclip must keep agent execution rules clear and predictable. > - The cheap-model profile added a second execution mode across adapters, task recovery, APIs, and the UI. > - That mode increased configuration and recovery complexity. > - This pull request removes the cheap-model profile as a product feature. > - The benefit is one model-selection path for normal work and recovery work. ## Linked Issues or Issue Description **What existing behavior does this improve?** This change simplifies model selection across agent configuration, task execution, recovery, and adapter capabilities. **Current behavior** Paperclip exposes cheap-model profiles in adapter metadata, agent runtime configuration, task overrides, recovery rules, APIs, and the board UI. Recovery work can select a different model profile from the agent's configured model. **Proposed behavior** Paperclip uses the agent's configured model for normal work and recovery work. Status-only recovery stays limited to coordination work. The API rejects legacy model-profile configuration. A migration removes stored model-profile values from existing agent, issue, and historical revision records. **Reason and benefit** One model path reduces configuration, API, UI, and recovery complexity. It also prevents status recovery from becoming a separate product-level model-routing feature. **Breaking changes** This change removes model-profile fields and adapter capability metadata. Existing stored model-profile values are removed by an idempotent migration. The validators reject new legacy profile values with clear errors. ## What Changed - Removed model-profile types, adapter capabilities, API fields, and model selection logic. - Removed cheap-model controls from agent and task UI surfaces. - Kept status-only recovery limited to coordination context while normal continuations use the configured agent model. - Added an idempotent migration that removes stored model-profile values from agents, issues, and configuration revisions without changing issue update timestamps. - Updated tests and product documentation for the single-model behavior. ## Verification - `pnpm check:token-gates` passes. - `pnpm -r typecheck` passes. - `pnpm build` passes. - `pnpm test:run` completed with 5,607 passing tests and 8 environment-sensitive failures in unrelated fixed-port and database-deadlock suites. The same failures repeated in an isolated rerun. CI is the final clean-room result. ## Risks - This is an intentional breaking change for clients that send model-profile fields. - The migration changes legacy agent, issue, and configuration-revision JSON. It is idempotent and preserves unrelated fields and issue update timestamps. - The change is cross-cutting because the removed feature existed in adapters, shared contracts, the server, plugins, and the UI. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex with `gpt-5`. Reasoning and tool use were enabled. The runtime did not expose the context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [ ] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [ ] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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141f202e40 |
Clean up experimental settings features (#12681)
## Thinking Path > - Paperclip is the open source app that people use to manage AI agents for work. > - Instance settings control optional product features and developer tools. > - The experimental settings page mixed active experiments, internal tools, and old recovery controls. > - Some workspace links also used the selected company instead of the workspace owner. > - These problems made settings hard to scan and could send users to the wrong company route. > - This pull request removes old controls, groups developer settings, and resolves workspace links from workspace data. > - The benefit is a smaller settings surface and correct workspace navigation. ## Linked Issues or Issue Description **What existing behavior does this improve?** This improves the instance experimental settings page, task watchdog controls, dependency wake recovery, and execution workspace routes. **Current behavior** The settings page shows old recovery controls and mixes product experiments with internal developer settings. Task watchdogs require an extra feature flag. Some direct workspace links use the current company prefix instead of the company that owns the workspace. **Proposed behavior** Remove the old task recovery experiment and its unused API surface. Make task watchdog controls available without the removed flag. Put worktree execution and managed environment controls in the developer section. Resolve direct workspace links from the workspace owner and reject a company prefix that does not own the workspace. **Reason and benefit** The smaller settings page is easier to understand. The server keeps only the dependency wake backstop that it still uses. Workspace links open under the correct company route. **Breaking changes** This removes the experimental issue graph recovery preview and run endpoints. It also removes the task watchdog feature flag. Task watchdog data and dependency wake behavior remain available. ## What Changed - Removed the old task watchdog and issue graph recovery feature flags. - Removed the old issue graph recovery preview, run controls, API contracts, and unused recovery implementation. - Kept resolved dependency wakes as the scheduler backstop. - Grouped product experiments and Paperclip developer settings on the instance settings page. - Made task watchdog controls available without an extra experimental flag. - Added owner-aware redirects and company checks for execution workspace routes. - Hid the false stopped-state badge while a workspace has no active runtime state. - Updated focused server and UI tests for the new behavior. ## Verification - `pnpm check:token-gates` - `pnpm -r typecheck` - `pnpm build` - `pnpm test:run` completed with 5,620 passing tests and four failures in unchanged workspace runtime port tests. The same four failures repeat when the two files run alone. - The complete GitHub CI matrix passed, including all server, serialized server, build, canary, and end-to-end jobs. ## Risks - Clients that call the removed experimental recovery endpoints must stop calling them. - The route checks depend on workspace detail access. An unknown or cross-company workspace returns the global not-found page. - There are no database migrations, lockfile changes, workflow changes, or design image changes. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used OpenAI Codex with GPT-5. The exact deployment ID and context window are not exposed. Reasoning, tool use, and code execution were enabled. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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25cf079ec5 |
feat(runner): add Codex-native application integration (#12591)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The runner package is useful only when the application can start, observe, and recover a native Codex run safely. > - Existing direct adapters must keep their current execution and finalization paths. > - The application boundary therefore needs additive persistence, authorization, coordination, and recovery behind an explicit experimental adapter. > - This pull request adds that Codex-only boundary without activating generalized providers, remote environments, or the later task/SDK surfaces. ## Linked Issues or Issue Description **Subsystem affected** Shared contracts, database persistence, adapter utilities, server native-runtime services, and the experimental Paperclip Runner adapter. **Problem or motivation** The already-landed runner package has a qualified Codex path, but the application needs durable native-run state, guarded runtime selection, authenticated coordination, tool security, finalization, and recovery before the experimental adapter can be exercised safely. **Proposed solution** Add a Codex-only `paperclip_runner` application path behind the existing default-off native-runner setting. Bind native state and coordination to company/run identity, preserve persisted-run recovery, and leave every direct adapter on its existing legacy execution path. **Alternatives considered** The earlier stack boundary introduced a generalized executor and remote-environment lifecycle here. That made this PR depend on implementations in higher PRs and changed reusable sandbox behavior globally. Those pieces are now deferred together to #12592. **Roadmap alignment** ROADMAP.md does not list a conflicting native-runner integration project. This change adds the application boundary for the existing Runner architecture. ## What Changed - Added native run/result/finalization/provider-trace persistence, shared validators, and idempotent migration/replay coverage. - Added guarded Codex-only runtime selection, authenticated PRP coordination, recovery, finalization, and interaction services. - Added run/company-bound tool-gateway authorization, credential redaction, SSRF protections, and replay-safe behavior. - Added the explicit `paperclip_runner` adapter behind the default-off rollout setting. - Preserved legacy answered-question wake projection and direct-adapter execution/finalization paths. - Hardened cancellation so only owned in-memory child processes are signaled; persisted recycled PIDs/process groups are never trusted. - Retained the narrow Claude ACPX isolated-context security follow-up discovered after #12590. - Deferred the generalized executor, provider ingress, remote lifecycle, SDK/lab/eval work, release-process changes, and lockfile. ## Verification - Changed-file delta against `master`: 133 files. - GitHub Actions is the authoritative verification environment for this PR. - Full CI, security, and Greptile review will run on this lowest unmerged stack PR. - Local tests/build/typecheck were not run because this checkout is resource constrained. - Static diff/reference checks pass, and `pnpm-lock.yaml` is unchanged. ## Risks - This touches central heartbeat and agent-route code, so legacy compatibility is the primary risk. - Runtime selection remains Codex-only and explicit; direct Codex, Claude, OpenCode, process, HTTP, and plugin adapters remain on their existing paths. - Fresh native starts fail closed while the rollout flag is off; persisted native records remain readable and recoverable. - Cancellation, company/run binding, tool calls, status decisions, and completion writes are guarded or replay-safe. > For core feature work, check [ROADMAP.md](ROADMAP.md) first and discuss it in #dev before opening the PR. Feature PRs that overlap with planned core work may need to be redirected. ## Model Used OpenAI Codex, GPT-5.6, with repository tools, code execution, and parallel agent review. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either linked existing issues or described the issue in-PR following the relevant issue template - [x] I have not referenced internal or instance-local Paperclip issues or links - [x] My branch name describes the change and contains no internal Paperclip ticket id - [ ] I have run tests locally and they pass — GitHub Actions is authoritative for this resource-constrained checkout - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented risks above - [ ] All Paperclip CI and security gates are green - [ ] Greptile is 5/5 with no open actionable findings - [x] I will address all Greptile and reviewer comments before merge ## Stack - Position: 3 of 5 overall; lowest of 3 currently unmerged - Base: `master` - Previous: [#12590](https://github.com/paperclipai/paperclip/pull/12590), qualified Claude ACPX runtime — merged - Next: [#12592](https://github.com/paperclipai/paperclip/pull/12592), generalized Codex executor, task experience, and developer SDKs --------- Co-authored-by: Dev Agent <dev@paperclip.ing> |
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e127faa14c |
fix(adapter-utils): bound the ACP startup handshake and fence the abandoned session promise (#12454)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Adapter utilities start and control agent sessions. > - The ACP startup handshake can stay pending when the sandbox transport closes. > - A pending handshake keeps the run active and prevents a clear operator result. > - This pull request bounds the handshake and fences its abandoned promise. > - The result gives each startup failure a terminal state and a safe host-authored diagnostic. ## Linked Issues or Issue Description No matching public issue or pull request appeared in the GitHub search for this failure. The issue details follow. **What happened?** The adapter engine awaited `runtime.ensureSession()` without a startup bound. A lost sandbox transport could leave the await pending. **Expected behavior** The engine must end the run when the startup deadline expires or the duplex transport closes. A late session result must not reopen the settled run. **Steps to reproduce** 1. Start an ACP-backed agent run. 2. Keep the ACP initialization call pending. 3. Let the startup deadline expire or close the duplex transport. 4. Confirm that the run reaches a terminal state and that a late session result does not reopen it. **Paperclip version or commit** `66e1c0df8b23cb8354b36dd446d9548dc4389191` merge base. **Deployment mode** Local dev (`pnpm dev`). **Installation method** Built from source (`pnpm dev`). **Agent adapter(s) involved** Custom / external plugin adapter. **Database mode** Not database-related. **Relevant logs or output** The new tests use fixed host-authored diagnostics for handshake guard failures and late close failures. **Additional context** The change updates the execution semantics document and adds regression coverage. The three existing failures in `execute.test.ts` also occur at the merge base. ## What Changed - Bound `runtime.ensureSession()` with a startup deadline and a duplex transport loss check. - Added terminal error codes for handshake timeout and transport loss. - Fenced late session resolution and rejection so the settled run has one owner. - Suppressed sandbox-controlled diagnostic values on the guard-failure and late-close paths. - Added regression tests for timeout, transport loss, late resolution, and late close rejection. - Documented the startup live-path contract. ## Verification - `pnpm --filter @paperclipai/adapter-utils exec tsc --noEmit` exits 0. - The engine test suite runs from the repository root. - The new regression cases pass. - The three known failures remain the only failures and also fail at the merge base. The board approved this pre-existing test exception. - Cold start and session resume cases pass. - All required GitHub checks pass. - Greptile reports 5/5 with no open P2 findings, recommendations, or follow-ups. ## Risks The startup guard changes only the ACP startup path. A slow but valid startup can now end at the configured deadline. The fence closes a late handle once and records fixed host-authored diagnostics. ## Model Used OpenAI Codex, GPT-5, current model version, tool use and code execution, with the full task context. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally. Three pre-existing failures remain and have an approved exception. - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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75b6d22aac |
fix(recovery): make silent-run detection UI-only (#12242)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The recovery service detects active runs that stop producing output. > - The dashboard already shows suspicious and critical silence to the board. > - The recovery scan also creates delegated evaluation work for the same signal. > - Output silence alone does not prove that the run or source task needs recovery. > - This pull request keeps the signal and removes automatic recovery artifacts. > - The benefit is a visible watchdog signal without assignment changes, wake requests, or issue noise. ## Linked Issues or Issue Description - Refs #6596 - Refs #7036 - Refs #9475 - Refs #11544 - Refs #11839 - Refs #11961 ## What Changed - Keep the one-hour suspicious level and four-hour critical level in active-run API summaries. - Stop output silence from creating or changing issues, recovery actions, comments, relations, assignments, and wake requests. - Store snooze, continue, and false-positive decisions against the run without an evaluation issue. - Preserve terminal-source folding, orphan cleanup, and open legacy evaluation links. - Show informational watchdog copy and board controls without requiring an evaluation-task link. - Document the UI-only watchdog contract. - Add focused server and UI coverage for artifact-free scans and board decisions. ## Verification - `pnpm -r typecheck` - `pnpm exec vitest run server/src/__tests__/heartbeat-active-run-output-watchdog.test.ts ui/src/components/IssueRunLedger.test.tsx` (32 tests passed) - `pnpm build` - `pnpm check:token-gates` - `git diff --check` - `pnpm test:run` completed locally with 4,772 passing tests. It found 30 unrelated macOS test-harness failures in eight workspace, skill, listener, and runtime exposure files. The failures use `/tmp` and `/private/tmp` as different paths, require Linux `/proc` listener data, or derive invalid HMR ports from the macOS ephemeral range. - The full Linux CI matrix passed on the latest commit. It includes build, typecheck, server tests, worker tests, serialization tests, canary, and e2e tests. - Greptile reviewed the latest commit at 5/5 with no actionable findings. ## Risks - The recovery scan keeps its existing result shape, but its created and escalated counts remain zero for output silence. - A false-positive decision now suppresses the signal for the full life of that run. - Open legacy evaluation issues remain visible and manually resolvable. The scan does not refresh or reprioritize them. - There is no database migration and no API schema change. > I checked `ROADMAP.md`. This change corrects existing watchdog behavior and does not duplicate planned core work. ## Model Used - OpenAI Codex, GPT-5, with extended reasoning, tool use, and code execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and the focused tests and non-platform gates pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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f572e08678 |
fix(recovery): stop automatic stranded-task takeovers (#11961)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The recovery service restores execution when a task loses its live path. > - The service retries the original agent for a limited number of attempts. > - The old fallback could select a manager or an executive and wake that agent. > - That fallback changed the effective recovery owner without a board decision. > - This pull request keeps the source owner and gives the exhausted recovery decision to the board. > - The benefit is a clear ownership rule with no automatic task takeover. ## Linked Issues or Issue Description Refs: #11807 Refs: #11817 **What existing behavior does this improve?** This improves stranded-task recovery in the server and the recovery action card in the board UI. **Subsystem affected** Cross-cutting: server recovery orchestration, recovery observability, board UI, and execution documentation. **Current behavior** Paperclip retries the original agent for a limited number of attempts. After the retry limit, it can select a manager, task creator, CTO, or CEO as a recovery owner. It can then wake that substitute agent. The source task keeps its assignee, but the automatic substitute wake creates an implicit takeover path. **Proposed behavior** Paperclip keeps the limited retry path for the original agent. If recovery is exhausted or unsafe, Paperclip creates one board-owned source recovery action. It keeps both source assignee fields. It does not wake a substitute agent. The board can repair, retry the original owner, explicitly reassign, or resolve the task. **Reason and benefit** Source task ownership must remain stable until a person or an approved policy changes it. The new rule removes implicit manager and executive takeover. It also gives operators clear evidence through the `board_escalation_no_takeover_v1` routing marker. **Breaking changes** Automatic recovery no longer wakes a manager or executive after the original-agent retry limit. Existing active agent-owned recovery actions remain visible and can resolve. Paperclip does not schedule a new takeover wake for those legacy actions. ## What Changed - Route exhausted and unsafe stranded recovery to a board-owned source action. - Preserve agent and user assignee fields during automatic escalation. - Keep limited same-agent continuity repair and provider quota monitoring. - Stop new manager, creator, CTO, and CEO recovery wakes. - Keep legacy agent-owned recovery actions readable and resolvable. - Add the routing marker to new board escalation evidence and observability. - Update recovery notices, the board UI card, tests, and execution documentation. ## Verification - Run `pnpm -r typecheck`. - Run `pnpm build`. - Run `pnpm check:token-gates`. - Run `pnpm --filter @paperclipai/server exec vitest run src/__tests__/heartbeat-process-recovery.test.ts`. - Run `pnpm --filter @paperclipai/server exec vitest run src/__tests__/heartbeat-workspace-branch-containment.test.ts`. - Run the focused recovery and UI Vitest files changed by this pull request. - Confirm that a paused or over-budget source owner creates one board action, keeps the source assignee, and creates no substitute wake. ## Risks - Operators must now make the final recovery decision after the original-agent limit. - Legacy agent-owned actions use their stored contract. This avoids a rollout-time ownership rewrite. - No database migration or API response shape changes are included. - The tests cover concurrent escalation, paused and over-budget owners, legacy actions, provider quota monitoring, and UI presentation. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used OpenAI Codex with GPT-5. The hosted exact model revision and context window are not exposed. Reasoning, tool use, and code execution were enabled. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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69590890d4 |
Fix remote-only workspace base refs and pre-adapter retry loops (#11892)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Execution workspaces give each run an isolated directory and a selected base ref > - A remote-only base ref can fail before `git worktree add` when the ref is not local > - A setup failure before adapter dispatch must block the run without an agent-only retry > - This pull request resolves both remote-tracking ref forms and bounds recovery for the same unresolved ref > - The benefit is correct workspace setup and no repeated pre-adapter recovery loop ## Linked Issues or Issue Description This PR has no existing public issue. It addresses a workspace setup bug. **What happened?** A remote-only base ref could fail before `git worktree add`. A setup failure before adapter dispatch could also queue an agent-only missing-comment retry. **Expected behavior** Paperclip must resolve `fix/foo` and `origin/fix/foo` before it creates a worktree. An unresolved ref must create a human-owned configuration blocker. Paperclip must not queue an agent-only retry when the adapter never starts. **Steps to reproduce** 1. Configure an execution workspace with a base ref that exists only on the remote. 2. Start a run that creates a fresh worktree. 3. Repeat the run with the same unresolved ref. 4. Observe one configuration blocker and no repeated agent-only recovery action. **Paperclip version or commit** `7664e323189bc219d8cbe00433b2e82b682b0504` **Deployment mode** Built from source with `pnpm dev`. **Agent adapter(s) involved** Not adapter-specific. The failure occurs before adapter dispatch. **Database mode** Not database-related. **Access context** Both board and agent execution paths can use execution workspaces. Related public pull request: `Refs #11123`. ## What Changed - Resolve remote-only base refs with the authenticated fetch helper before `git worktree add`. - Support both unqualified refs and remote-tracking refs. - Raise a `configuration_incomplete` blocker when the requested ref remains unresolved. - Suppress missing-comment retries when setup fails before adapter dispatch. - Add the requested ref to the recovery fingerprint to bound identical recovery actions. - Add focused tests and update the execution semantics document. ## Verification - `tsc --noEmit` passed for the changed server code. - Focused Vitest suites passed, including four base-ref tests, fingerprint deduplication, and pre-adapter retry suppression. - GitHub Actions must run the full pull request gate. ## Risks Low risk. The change affects workspace setup before adapter dispatch. Existing worktree reuse remains unchanged. An unresolved ref now creates a clear configuration blocker instead of starting an adapter run. ## Model Used OpenAI GPT-5; exact model ID `gpt-5`; agentic tool use and repository review. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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cb0009b097 |
fix: preserve recovery retries across restarts (#11817)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The control plane must keep each active issue on a clear execution or recovery path. > - A missing issue disposition can require more than one bounded repair attempt. > - A server restart could lose that repair path or move source ownership to the recovery owner. > - A parked or expired retry could also make the user interface show a false healthy state. > - Concurrent recovery loops must not schedule the same repair attempt twice. > - This pull request keeps retry state durable, makes scheduling atomic, and keeps source ownership stable. > - The benefit is that recovery continues after a restart and operators see the correct state. ## Linked Issues or Issue Description **What happened?** A run that ended without a valid issue disposition could lose its repair path after a server restart. Manager recovery could also change the source owner. In addition, a parked or expired retry could make the issue look healthy when no active work existed. Concurrent reconciliation could also schedule the same repair attempt twice. **Expected behavior** Paperclip must keep bounded source and manager repair attempts across restarts. Recovery ownership must stay separate from source issue ownership. The server and user interface must report only a live retry as active work. Each repair attempt must be scheduled at most once per company. **Steps to reproduce** 1. Start an agent run on an issue. 2. End the run without a valid issue disposition. 3. Let the first repair attempt schedule a retry. 4. Restart the server, let the retry time pass without a live run, or start two reconciliation loops together. 5. Observe that the repair path can stop, the issue can show a false healthy state, or duplicate retries can be created. **Paperclip version or commit** The problem existed on `master` before candidate head `d8e620fe86bade7df18decac332007f5821ae04f`. **Deployment mode** The problem affects self-hosted servers and local builds that use automatic recovery. ## What Changed - Persist bounded source-owner and manager repair lineages with stable fingerprints and retry limits. - Resume incomplete disposition repairs after a server restart. - Keep recovery ownership separate from source issue ownership and enforce source mutation authority. - Project live retry evidence into issue and blocker summaries. - Show recovery owner, return owner, attempt count, and retry state in the board user interface. - Treat expired or parked retries as attention states unless a queued or running attempt exists. - Atomically deduplicate disposition-repair wake requests with a company-scoped partial unique index. - Reuse the winning run when concurrent reconciliation loses the uniqueness race, without duplicate scheduling activity. - Honor disabled on-demand wake policy before recovery scheduling and again before delayed retry promotion. - Keep the new index migration safe for lagging seeded databases that already contain the index. - Add server and user interface tests for recovery, restart, ownership, retry, concurrency, and blocker states. - Update the implementation and execution semantics documents. ## Verification - Focused server recovery and ownership suites: 282 tests passed on the repaired base candidate. - Focused user interface recovery suites: 128 tests passed on the repaired base candidate. - Atomic-deduplication schema and recovery suites: 111 tests passed on the first Greptile repair. - Recovery and scheduled-retry wake-policy suites: 126 tests passed at `d8e620fe86bade7df18decac332007f5821ae04f`. - The exact lagging-source migration-order test passed after the index migration became idempotent: 1 test passed and 62 unrelated tests were skipped. - `@paperclipai/db` and `@paperclipai/server` typechecks passed at the current head. - Migration generation and migration safety checks passed for migration `0226_tan_colossus.sql`. - `pnpm check:token-gates` passed on the repaired base candidate. - `pnpm -r typecheck` passed on the repaired base candidate. - `pnpm build` passed on the repaired base candidate. - `pnpm test:run` passed 4,540 tests on the repaired base candidate. Four fixed-port cases met listeners that already existed on the host. - The two unchanged fixed-port files passed in an isolated network namespace: 129 tests passed and 27 tests were skipped. - Independent Security and QA reviews approved `63c0423aab54c66f2293a20b0fb3f3b013ee3ba8`; exact-head re-review is required after automated checks settle on `d8e620fe86bade7df18decac332007f5821ae04f`. ## Risks - Recovery orchestration affects issue liveness and ownership. The new paths use bounded attempts, stable fingerprints, row locks, authority checks, and database uniqueness. - A conservative attention state can show more warnings when a scheduled retry has no queued or running attempt. It does not hide stopped work. - Migration `0226_tan_colossus.sql` creates a partial unique index on a known-large table. Migrations run transactionally, so `CONCURRENTLY` is unavailable. The matching disposition-repair key namespace is introduced by this release, so deployed databases have no matching rows before the index is added. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex from the GPT-5 model family used agentic reasoning, tool use, and code execution. The runtime did not expose the exact model ID or context window. - Anthropic Claude Opus 5 used a 1M context window, tool use, and code execution for part of the user interface repair, as recorded in the commit history. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> Co-authored-by: Claude Opus 5 (1M context) <noreply@anthropic.com> |
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10d0555189 |
fix(interactions): authorize resolvers consistently (#11376)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Issue interactions give agents and people a structured decision record. > - Resolver routes used different authorization rules. > - Some routes blocked valid agents, including task watchdogs with normal issue access. > - The API did not show who could resolve a pending interaction. > - This pull request gives every interaction kind one resolver policy evaluator. > - The benefit is a clear decision path with consistent governance and company isolation. ## Linked Issues or Issue Description Fixes: #8087 Refs: #7403 Related PR: #11082 proposes board-only confirmation rules. This change keeps human-only review as an explicit policy. **What happened?** Agents could create issue interactions. Some resolver routes still required board access. This left valid agent confirmations pending. Task watchdogs could see the same problem without board identity. **Expected behavior** Every interaction kind must use one resolver policy contract. The contract must support `anyone`, `not_creator`, and `human_only`. It must also apply all normal governance controls. **Steps to reproduce** 1. Create a `request_confirmation` interaction as an agent. 2. Resolve it with another authorized agent. 3. Observe the board-only denial. **Paperclip version or commit** The problem exists on `master` before this change. **Deployment mode** Local development with `pnpm dev`. ## What Changed - Add canonical policies for `anyone`, `not_creator`, and `human_only`. - Use one server evaluator for every interaction kind. - Apply named addressees, company limits, review rules, and task watchdog scope. - Charge cross-issue resolutions to the existing per-run action limit. - Return the effective resolver audience in attention and interaction data. - Show the audience, governance choices, and denial reasons in the board UI. - Add telemetry, API documents, product documents, and regression fixtures. - Add migration provenance for safe legacy behavior. - Make migration `0218` safe for complete replays and partial prior runs. ## Product Rules - An interaction records a response. It does not grant authority for the next action. - `anyone` lets any authorized issue participant respond. - `not_creator` requires a responder other than the interaction creator. - `human_only` requires an authorized person. - A named addressee, company policy, or governed action can narrow the audience. - These controls cannot widen the audience. - A task watchdog uses the same rules as an ordinary agent. - A task watchdog does not receive board authority. - An agent resolution on another issue uses the shared cross-issue action limit. - Legacy pending interactions keep their earlier restrictions. - The UI shows the effective audience and a permanent denial reason. ## Verification - `pnpm --filter @paperclipai/db check:migrations` - `pnpm --filter @paperclipai/db typecheck` - `pnpm exec vitest run packages/db/src/issue-thread-interaction-resolver-policy-migration.test.ts` - The focused PostgreSQL test applies migration `0218` twice. - The test also completes a partial prior run and preserves existing provenance. - The latest GitHub head has 29 successful checks. - The opt-in Storybook visual check skipped as expected. - Greptile reports 5/5 with no open comments. ## Risks - New interaction writes use `anyone` by default. - Callers must select `not_creator` or `human_only` when they need stricter review. - Legacy pending interactions keep the old creator and human restrictions. - Migration `0218` fills only missing provenance fields during recovery. - Cross-issue resolutions can reach the existing action limit. - The shared evaluator affects every interaction kind. - Route, service, database, shared contract, and UI tests cover these rules. > This work matches the Agent Reviews and Approvals direction in `ROADMAP.md`. It does not duplicate a planned item. ## Model Used OpenAI Codex, GPT-5. The runtime does not expose the exact deployment ID or context window. The agent used reasoning, repository tools, shell commands, and test execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either linked public issues or described the issue with the required labels - [x] I have not referenced internal Paperclip issues or links - [x] My branch name describes the change and contains no internal ticket id - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation - [x] I have considered and documented the risks - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open comments - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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cd7f84965c |
fix(recovery): preserve hand-back wake liveness (#10562)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The heartbeat service delivers issue work to assigned agents. > - Recovery can hand an issue back to its agent while the recovery run is still active. > - The hand-back wake can merge into that active run and disappear when the run exits. > - The stranded-work scan also treats the successful recovery run as proof that the handed-back issue is live. > - This pull request keeps the hand-back wake for follow-up delivery and lets the scan repair a lost wake. > - The benefit is that an assigned issue continues after recovery without manual operator action. ## Linked Issues or Issue Description No public issue exists. This is related to the wake reconciliation work in #8943. **What happened?** A recovery action could hand an assigned issue back from `blocked` to `todo`. The `issue_recovery_action_restored` wake then merged into the recovery run that made the change. The wake disappeared when that run exited. The stranded-work scan did not repair the issue because it treated the successful recovery run as current liveness. **Expected behavior** Paperclip must dispatch the hand-back wake after the recovery run exits. If that delivery is lost, the stranded-work scan must enqueue the assigned `todo` issue again. **Steps to reproduce** 1. Start a recovery run for an assigned blocked issue. 2. Resolve a recovery action with the `handed_back` outcome. 3. Move the issue to `todo` while the recovery run is still active. 4. Observe that the wake merges into the active run and no new run starts after it exits. 5. Run the stranded-work scan and observe that the successful latest run prevents repair. **Paperclip version or commit** `131d476a7e` **Deployment mode** Local dev (`pnpm dev`). The defect is in the core server and is not deployment-specific. **Agent adapter(s) involved** Not adapter-specific. This is a core heartbeat and recovery defect. ## What Changed - Added `issue_recovery_action_restored` to the wake reasons that require follow-up delivery when an issue run is active. - Made the stranded-work scan detect a resolved hand-back that occurred during or after the latest successful run. - Added focused regression tests for the heartbeat coalescing seam and the stranded-work repair shape. - Documented the hand-back liveness guarantee in execution semantics section 9.1. ## Verification - `pnpm exec vitest run server/src/__tests__/heartbeat-comment-wake-batching.test.ts server/src/__tests__/heartbeat-process-recovery.test.ts` passed: 104 tests. - `pnpm --filter @paperclipai/server typecheck` passed. - `pnpm -r typecheck` passed. - `pnpm build` passed. - `pnpm test:run` passed the server shard (3,095 passed, 2 skipped) and UI shard (3,182 passed). One unrelated CLI test failed because the agent environment exports static AWS credentials. `env -u AWS_ACCESS_KEY_ID -u AWS_SECRET_ACCESS_KEY -u AWS_SESSION_TOKEN pnpm exec vitest run cli/src/__tests__/secrets.test.ts` passed all 8 tests. - `git diff --check` passed. - All GitHub checks passed on commit `8b380e67e6`. - Greptile gave 5/5 confidence with no comments or unresolved threads. ## Risks - Low risk. The follow-up rule affects only a recovery hand-back wake that arrives while the same issue already has an active run. - The backstop adds one indexed recovery-action lookup for an assigned `todo` issue whose latest run succeeded. - The timestamp check uses the latest run start time. This includes hand-backs made by that run and later hand-backs, but excludes older resolved actions. ## Model Used - OpenAI Codex with GPT-5 (`gpt-5`), agentic reasoning, tool use, and code execution. The serving context-window size is not exposed to the agent. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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71a6535792 |
docs(execution-semantics): define routable blocking and watchdog restoration (#10094)
## Thinking Path > - Paperclip is the open source control plane people use to manage AI-agent companies. > - Execution semantics define when work may stop, how child work reports upward, and how watchdog recovery proves liveness was restored. > - The existing docs did not require a routable waiting path before entering `blocked`, leaving permission-denial and review workflows vulnerable to dead ends. > - Child-to-parent reporting and low-trust review delegation also needed explicit channels and ownership boundaries. > - Watchdog recovery needed bounded restoration verification rather than treating a recovery write as proof of restored progress. > - The security-sensitive defaults were reviewed and approved before publication. > - This pull request documents those contracts and synchronizes the bundled Paperclip skills that operationalize them. > - The benefit is clearer stop conditions, safer reporting defaults, and bounded watchdog recovery without sacrificing liveness. ## Linked Issues or Issue Description - No public GitHub issue exists for this execution-semantics documentation phase, so the problem and solution are described here in full. - Problem: `blocked` could be entered without a routable owner/action path, review findings could be reported on the wrong issue or treated as blockers, and watchdog recovery lacked bounded verification of restored liveness. ## What Changed - Require a routable waiting path for `blocked` and clarify that permission denial alone is not a blocker. - Define canonical child-to-parent completion/report channels, review-delegation ownership, and the sanctioned courier pattern. - Specify atomic watchdog recovery batches, fingerprint validation, bounded restoration attempts, and human escalation. - Document the low-trust preset default for report comments and align both bundled Paperclip skills. ## Scope and Sequencing - This is the contract-first P1 documentation PR. Runtime enforcement is intentionally excluded and follows in the separately owned implementation phases; these docs define the acceptance contract those phases must satisfy. - The five-file patch is approved and frozen for this PR, so review findings about absent runtime support are tracked as implementation-phase requirements rather than edits to this docs-only change. ## Verification - `git diff --check origin/master...HEAD` - Confirmed the PR diff is exactly 5 approved docs/skill files with 91 insertions and 1 deletion. - Confirmed the patch preserves the approved execution-semantics contract after replay on latest `origin/master`. ## Risks - Low implementation risk: documentation and skill guidance only; no runtime code, schema, migration, dependency, lockfile, or workflow changes. - Semantic risk is limited to readers or agents applying the clarified contracts; the security-sensitive R1a default was approved before publication. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex coding agent (exact underlying model ID and context-window size are not exposed by this runtime), with reasoning, terminal tool use, Git/GitHub operations, and code execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced private URLs or internal issue identifiers - [x] My branch name describes the change and contains no internal Paperclip ticket id - [x] I have run the applicable docs-only checks locally and they pass - [x] Tests are not applicable because this is a docs/skill-guidance-only change - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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4f9894df44 |
fix(server): bound accepted-interaction continuation recovery (#9656)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Heartbeat recovery keeps assigned issues moving when a run or continuation path disappears > - Accepted issue-thread interactions can create a continuation wake after an agent previously parked for review > - The recovery sweep could requeue that accepted-interaction wake while the queued-run gate cancelled it using the older pre-acceptance park summary > - That cancellation path had no bound, so recovery could repeat the same wake and cancellation indefinitely > - This pull request makes accepted-interaction evidence supersede the older park and caps repeated recovery cancellations at three attempts > - The benefit is that accepted work resumes normally, while genuine repeated failures become a visible dependency wait or escalation instead of a cancel loop ## Linked Issues or Issue Description Refs #9331 The accepted-interaction continuation recovery added by #9331 can encounter a stale continuation summary written before approval. The sweep requeues a continuation carrying the accepted interaction timestamp, but queued-run invalidation cancels it because the older summary says to wait for review. Recovery then sees the accepted interaction without a successful run and requeues again. This PR prevents that stale-summary cancellation and adds a bounded fallback if three equivalent cancellations have already occurred. ## What Changed - Let queued continuation wakes with a parseable `interactionResolvedAt` bypass a pre-acceptance waiting-for-review park summary. - Count consecutive unsuccessful continuation runs for the same issue and agent since interaction acceptance; after three review-park cancellations, convert a real dependency wait or use the existing visible escalation path. - Add focused regression coverage for the park bypass, unchanged non-interaction park behavior, below-cap requeue, cap escalation, and successful-run skip. - Document the accepted-interaction precedence and bounded requeue contract in execution semantics §9.2. ## Verification - `pnpm vitest run server/src/__tests__/heartbeat-process-recovery.test.ts -t "accepted interaction continuation recovery|accepted interaction recovery after its continuation succeeds|requeues accepted interaction continuations stranded"` - `pnpm vitest run server/src/__tests__/heartbeat-stale-queue-invalidation.test.ts -t "pre-acceptance review park|continuation summary parks executor work"` - `pnpm --filter @paperclipai/server typecheck` ## Risks - Low risk: the park bypass only applies when the queued context contains a parseable interaction resolution timestamp. - The retry bound is scoped to unsuccessful `issue_continuation_needed` runs for the same company, issue, agent, error code, and post-acceptance time window. - No schema, migration, API, or UI changes. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, exact model ID `gpt-5.5`, high-reasoning coding mode with repository tool use and command execution; context-window size was not exposed by the runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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9af96461d5 |
fix(server): restore stranded recovery continuations (#9630)
## Thinking Path > - Paperclip is the open source control plane people use to coordinate AI agents and their work. > - Its server recovery layer classifies blocked issue graphs and restores interrupted heartbeat execution. > - A dependent issue could remain dispatch-suppressed by a cancelled blocker without producing operator-visible attention when the dependent still displayed as todo or backlog. > - Separately, a monitor-triggered run that lost its process before disposition could consume the monitor's one-shot wake without scheduling the existing bounded continuation. > - Both gaps strand useful work even though Paperclip already has the relevant blocker-attention and process-loss recovery mechanisms. > - This pull request widens the existing classification path and reuses the single process-loss retry for monitor dispatches with no future wake. > - The benefit is visible, routable recovery without weakening dependency checkout rules or introducing an unbounded retry loop. ## Linked Issues or Issue Description No matching public GitHub issue or pull request was found. ### What happened? Two server recovery cases could leave work stranded: 1. A non-terminal, agent-assigned issue with an unresolved cancelled blocker remained ineligible for checkout, but blocked-chain liveness classification only inspected issues already displaying `blocked` or `in_review`, so the existing `blocked_by_cancelled_issue` attention was not surfaced. 2. A one-shot issue monitor cleared its next check when dispatched. If that monitor-triggered run ended as `process_lost` without a tracked local child, the existing bounded retry gate rejected it and no future monitor wake remained. ### Expected behavior - Cancelled blockers continue to be unresolved dependencies, and their dependents receive blocker attention regardless of whether the dependent currently displays as backlog, todo, blocked, or in review. - A monitor-triggered run lost before disposition receives exactly one bounded continuation when no future monitor check exists; a second loss follows the normal recovery-action escalation path. ### Steps to reproduce 1. Create an agent-assigned todo issue blocked by a cancelled issue and run issue-graph liveness classification. 2. Observe that no cancelled-blocker finding appears before this change. 3. Dispatch a due issue monitor, clear its one-shot `monitorNextCheckAt`, and mark the resulting untracked run `process_lost`. 4. Observe that no retry is queued before this change. ### Environment - Paperclip commit: `3e348b96b` - Deployment: built from source / local test environment - Adapter: not adapter-specific; core server recovery - Database: embedded test database ## What Changed - Inspect non-terminal, agent-assigned issues with unresolved blocker edges during blocked-chain liveness classification. - Include cancelled dependents in the existing blocked-inbox attention query while preserving company-scoped relation checks. - Allow monitor-triggered `process_lost` runs with no future monitor wake to use the existing single bounded retry. - Mark monitor recovery retries as continuation-needed context and retain the existing second-loss escalation behavior. - Document cancelled-blocker and monitor-dispatch recovery semantics. - Add focused regressions for liveness findings, attention propagation, one retry, and second-loss escalation. ## Verification - `pnpm exec vitest run server/src/__tests__/heartbeat-process-recovery.test.ts server/src/__tests__/issue-blocker-attention.test.ts server/src/__tests__/issue-liveness.test.ts` — 3 files, 126 tests passed. - `pnpm --filter @paperclipai/server typecheck` — passed. ## Risks - Low risk and server-only. The liveness scan inspects more unresolved dependency shapes, which can produce additional existing attention entries for previously invisible cancelled blockers. - Monitor recovery remains bounded by `processLossRetryCount < 1`, and the extra path only applies when the dispatch was monitor-triggered and no future monitor check exists. - No schema, migration, authorization, API-contract, or UI changes. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI `gpt-5.4` through Codex CLI, with reasoning, repository tool use, command execution, and test execution capabilities. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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1fe89eb8f8 |
Enforce durable external-wait liveness (#9373)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The heartbeat/recovery subsystem decides whether an agent run has a durable continuation path after the process stops. > - External waits need stricter semantics than local background watchers: a killed local process is not durable, while a first-class blocker/monitor/scheduled wake is. > - Without that distinction, recovery can repeatedly treat adapter-failed continuations as live work and obscure the real reason a task stopped. > - This pull request adds explicit durable external-wait liveness handling and documents the expected execution semantics. > - It also improves operator-visible recovery evidence so invalid external-wait paths explain why they were rejected. > - The benefit is clearer recovery behavior, fewer duplicate continuation recoveries, and a safer contract for monitor-backed external waits. ## Linked Issues or Issue Description - Refs #5978 - Related PRs: #4988, #7495, #8502 ## What Changed - Added durable external-wait liveness classification so local/background watchers are not accepted as durable live paths after the owning process exits. - Preserved first-class blocker/monitor/scheduled wake paths as valid external-wait continuations. - Added backend regression coverage for killed watcher failure, monitor-backed durable wait resumption, normal completion, blocker behavior, and no duplicate recovery. - Added adapter utility coverage for terminal cleanup behavior used by local process adapters. - Surfaced invalid external-wait recovery evidence in the recovery action card and run ledger. - Updated execution semantics documentation and the V1 implementation contract. ## Verification - `pnpm check:token-gates` passed. - `pnpm -r typecheck` passed. - `node scripts/run-vitest-stable.mjs --mode general --group general-server` equivalent lane passed in CI-clean env: 238 files, 2164 tests passed, 1 skipped. - `node scripts/run-vitest-stable.mjs --mode general --group general-workspaces-a` passed in fully Paperclip-env-clean env: UI 305 files / 2430 tests; CLI 43 files / 230 tests. - `node scripts/run-vitest-stable.mjs --mode general --group general-workspaces-b` passed in fully Paperclip-env-clean env: shared/db/adapters/plugin packages all green. - `node scripts/run-vitest-stable.mjs --mode serialized` passed in fully Paperclip-env-clean env: 107 serialized server suites green, including 84/84 heartbeat-process-recovery tests. - `pnpm build` passed in fully Paperclip-env-clean env. Notes: running `pnpm test:run` directly inside the Paperclip heartbeat environment exposed local harness env contamination in existing tests (`PAPERCLIP_CONFIG`, `PAPERCLIP_DB_BACKUP_DIR`, and `PAPERCLIP_WORKTREE_START_POINT`). Re-running the same lanes with inherited `PAPERCLIP_*` and port env removed produced the CI-equivalent green results above. ## Risks - Medium behavioral risk: this changes recovery classification for stopped local external-wait processes, so adapters relying on unmanaged background watchers must use blockers, monitors, scheduled wakes, or explicit durable handoff instead. - Low UI risk: recovery-card copy changes are covered by component tests and Storybook screenshot QA. - No database migration is included. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5-based coding agent, tool-enabled terminal/code execution. Exact context-window metadata was not exposed in the runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com> |
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936687ca55 |
fix(workspace): restore clean branch drift on finalize (#8914)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Agent runs can execute inside reusable, runtime-created git worktree execution workspaces. > - Those managed worktrees record the expected branch so later dispatches do not accidentally run an agent in the wrong checkout. > - Successful run finalization already checked branch coherence, but it treated every unrecorded branch switch as fatal. > - A common publishing flow can briefly switch a clean worktree to a PR/publish branch that points at the same commit as the recorded issue branch, leaving no divergent work to protect. > - This pull request keeps the strict finalization guard for unsafe drift, but lets finalization restore the recorded branch when same-commit repair is provably safe. > - The benefit is fewer false failed runs after harmless branch switches while preserving hard failures for divergent or dirty worktrees. ## Linked Issues or Issue Description No public issue exists for this exact finalization failure. Related public worktree-recovery context: #3087 and #3056, but those address different worktree realization/reuse recovery paths rather than successful-run finalization branch repair. Bug report details: **What happened?** When an adapter run succeeded after switching a managed git worktree from its recorded issue branch to a publish/PR branch, finalization failed with a managed worktree branch mismatch even when the publish branch and recorded branch pointed at the same commit and the worktree was clean. **Expected behavior** Finalization should restore the recorded branch only when it can prove the worktree is clean, registered, and the recorded branch points at the current `HEAD`. If the actual branch has different commits or unsafe state, finalization should continue to fail with bounded validation evidence. **Steps to reproduce** 1. Create a runtime-managed `git_worktree` execution workspace for an issue run. 2. During the adapter run, create and check out a new publish branch without committing new changes. 3. Return adapter success and let heartbeat finalization run. 4. Before this change, finalization records a failed branch check and fails the run even though the branches point at the same commit. 5. With this change, finalization records the repair operation, restores the recorded branch, and records a successful finalize row. 6. Repeat with a commit on the publish branch; finalization still fails because the branch heads differ. **Paperclip version or commit** Reproduced against `master` at `bac7307ec`; fixed by this PR at `64ec605cf`. **Deployment mode** Local dev / built from source. **Agent adapter(s) involved** Not adapter-specific. This is core heartbeat/workspace finalization behavior. **Database mode** Embedded test Postgres in the focused server test. **Access context** Agent run finalization. **Node.js version** `v25.6.1` **Operating system** `Darwin 24.6.0 arm64` **Relevant logs or output** The new focused test intentionally exercises both outcomes: ```text Test Files 1 passed (1) Tests 3 passed (3) ``` **Relevant config** Runtime-created `git_worktree` execution workspace. **Additional context** The unsafe divergent branch case still fails with `workspace_validation_failed` and `git_worktree_branch_incoherence` evidence. **Privacy checklist** Reviewed; this description avoids internal task links, local workspace paths, credentials, and instance-specific URLs. ## What Changed - Reused the existing guarded branch-coherence repair helper during heartbeat finalization when the final branch inspection finds clean same-commit branch drift. - Recorded repair metadata in the `workspace_finalize` operation so reviewers/operators can audit whether finalization repaired branch drift. - Preserved failure behavior for divergent branch heads and surfaced the bounded workspace validation evidence from the repair helper. - Added focused server coverage for safe finalization repair and unsafe divergent branch failure. - Updated execution semantics docs to describe the narrower finalization rule. ## Verification - `pnpm exec vitest run server/src/__tests__/heartbeat-workspace-finalize-branch.test.ts` - `pnpm --filter @paperclipai/server typecheck` - `git diff --check` ## Risks Low to medium risk. The change affects successful-run finalization for runtime-created git worktree execution workspaces. The repair path is constrained to clean, registered, same-commit branch drift, and the focused test confirms divergent branch heads still fail instead of being restored silently. ## Model Used OpenAI Codex, GPT-5-based coding agent. Exact hosted model ID was not exposed in the runtime; tool use and local shell execution were enabled. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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2eba718bef |
Fix sandbox bridge credentials and stalled review recovery (#8844)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The local adapter and heartbeat recovery systems decide whether an agent has a real control-plane mutation path. > - Sandboxed local adapters split execution between the trusted host process and the sandbox shell/tool surface. > - A host-side adapter can still reach Paperclip while the sandbox shell surface cannot, which leaves agents thinking no endpoint or credentials are configured even though the host can still post comments. > - Execution-policy review stages can also remain pending after a reviewer run finishes without recording a decision. > - This pull request makes the sandbox bridge available to the actual shell mutation surface and adds bounded recovery for terminal-but-still-pending review participants. > - The benefit is that agents get a real reachable Paperclip API path where they need it, and stalled review stages become visible recovery work instead of silently drifting. ## Linked Issues or Issue Description No exact public GitHub issue matched this combined failure. I searched for exact and related terms including `cannot reach the Paperclip control plane`, `execution_review_participant_recovery`, `sandbox callback bridge`, `review participant in_review`, and `control plane sandbox`. Related public issues: - Refs #8482 for `in_review` liveness invariant recovery. - Refs #863 for prior agent API-key reachability confusion. - Refs #248 for the broader sandboxed agent execution model. Bug summary: - What happened: a sandboxed local-adapter run could have host-side Paperclip access while the sandbox Bash/tool surface lacked a reachable API endpoint or usable run credentials. Separately, a reviewer run could finish while its execution-review stage remained pending, leaving the source issue in `in_review` with no decision and no live participant run. - Expected behavior: the mutation surface that agents actually use should receive a run-scoped Paperclip bridge, and pending review participants should get one bounded normal-model recovery wake before moving to explicit blocked/source-scoped recovery. - Steps to reproduce: run a sandbox-backed local adapter that needs Bash/curl/tooling to call Paperclip from inside the sandbox, or finish an execution-policy reviewer run without submitting the pending review decision. - Deployment mode: local/authenticated private development instance with sandbox-backed local adapters. ## What Changed - Changed sandbox callback bridge startup so bridge credentials are passed through the sandbox runner environment instead of embedded in the visible `nohup env ...` command string. - Added adapter-utils coverage proving the sandbox shell can call Paperclip through the bridge, forwards the host run JWT with `X-Paperclip-Run-Id`, and does not leak host or bridge tokens into stdout/stderr, runner command text, or runtime files. - Added one bounded execution-review participant recovery path for terminal reviewer runs whose `executionState` remains pending. - Escalated exhausted or non-invokable review participant recovery to blocked/source-scoped recovery with dedicated evidence, activity, and next-action text. - Documented the mutation-surface reachability contract in `doc/execution-semantics.md` and updated the Paperclip skill authentication guidance for sandbox bridge env vars. ## Verification - `pnpm exec vitest run packages/adapter-utils/src/execution-target-sandbox.test.ts` - `pnpm exec vitest run server/src/__tests__/heartbeat-process-recovery.test.ts --no-file-parallelism --maxWorkers=1` - `pnpm --filter @paperclipai/adapter-utils typecheck` - `pnpm --filter @paperclipai/server typecheck` - `git diff --check` - `curl -fsS $PAPERCLIP_API_URL/api/health` returned `status: ok` on the local instance. ## Risks - Medium behavioral risk: more `in_review` issues with terminal-but-pending reviewer runs will now be retried once and then blocked explicitly instead of remaining quiet. - Low sandbox bridge risk: credential delivery moved from command text to the runner environment, which is less leaky but depends on sandbox providers honoring the env payload for startup commands. - No database migration is included. - Full repo build and CI were not run locally before opening the PR; targeted server/adapter tests and typechecks passed. ## Model Used OpenAI GPT-5 via the Codex local agent, with repository tool use and shell-based code execution. The runtime did not expose a precise context-window value to the agent. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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d68c34f2cc |
Fix managed workspace branch coherence recovery (#8826)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Managed issue workspaces are part of the control-plane runtime boundary: the server records which git worktree and branch an agent run is allowed to use. > - Existing reuse checks validated the worktree path and cleanliness, but did not fully validate that the actual checked-out branch still matched the recorded execution workspace branch. > - That gap let an agent run switch a managed worktree onto a publishing branch without updating the execution workspace record, then later reuse or finalize the workspace as though it were coherent. > - The runtime needs a bounded repair path for provably safe mismatches and a hard validation failure for dirty, divergent, or unrecorded branch transitions. > - This pull request adds branch coherence to managed git worktree validation, records explicit recovery evidence, and prevents finalize success when a run silently changes branches. > - The benefit is that branch drift becomes either safely repaired or visibly recoverable instead of silently corrupting managed workspace state. ## Linked Issues or Issue Description No public GitHub issue exists for this bug. Bug report: - What happened: a managed agent workspace could be recorded for one branch while the underlying git worktree was actually checked out on another branch. Reuse and finalization could still treat the workspace as healthy. - Expected behavior: managed git worktrees should verify the actual branch against the recorded execution workspace branch. Safe same-HEAD clean mismatches may be repaired, while dirty, divergent, or unrecorded branch transitions should fail into explicit workspace validation recovery. - Reproduction outline: create a runtime-managed issue worktree, switch its checkout to another branch without updating the execution workspace record, then attempt reuse or run finalization. - Deployment mode: local/self-hosted Paperclip server using managed git workspaces. - Related public work: Refs #7644 and #7579. Related but not duplicate: #8275 and #5851. ## What Changed - Added managed git worktree branch inspection, formatted validation evidence, and safe same-HEAD repair logic to the workspace runtime service. - Validated recorded managed workspace branch state before reuse and during heartbeat setup. - Added finalization-time branch guards so runs that silently switch branches fail with `workspace_validation_failed` instead of recording a successful finalize. - Added recovery fingerprints and evidence for `git_worktree_branch_incoherence`, including manual-repair next actions for unsafe branch drift. - Documented branch coherence as part of runtime-created git worktree workspace coherence. - Added focused tests for safe branch repair, dirty/divergent recovery evidence, heartbeat setup validation, and finalize failure/success paths. ## Verification - `pnpm install --frozen-lockfile` - `git diff --check origin/master...HEAD` - `pnpm exec vitest run server/src/__tests__/workspace-runtime.test.ts server/src/__tests__/heartbeat-workspace-session.test.ts server/src/__tests__/issue-recovery-actions.test.ts server/src/__tests__/heartbeat-workspace-finalize-branch.test.ts` - `pnpm -r typecheck` - `pnpm test:run` - `pnpm build` Notes: - An initial full `pnpm test:run` attempt hit a transient `socket hang up` in one `plugin-routes-authz` case. The exact case passed when rerun directly, the full `plugin-routes-authz` file passed, and the subsequent full `pnpm test:run` passed. - `pnpm build` still emits existing Vite CSS pseudo-element and chunk-size warnings unrelated to this change. ## Risks - This intentionally changes behavior for managed runs that switch branches without recording the transition: they now fail during workspace validation/finalization instead of silently proceeding. - The automatic repair path is intentionally narrow. It only repairs clean branch mismatches when both branches point at the same commit; dirty or divergent worktrees require manual recovery. - Recovery fingerprints now include workspace-validation evidence, so duplicate recovery-action grouping is more precise for branch-incoherence failures. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used OpenAI Codex, GPT-5 Codex CLI/API coding agent, with shell/git/test execution and reasoning mode enabled. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Cody <noreply@paperclip.ing> Co-authored-by: Cody <cody@paperclip.ing> |
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277a9a43d6 |
fix(recovery): convert review-parked continuations into dependency waits (#8371)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The productivity-recovery subsystem watches for "stranded" assigned issues — claims whose live run disappeared — and repairs, resumes, or visibly blocks them > - When an executor decomposes an umbrella issue into sub-tasks, it parks its own continuation as "waiting on review/approval" (error code `issue_continuation_waiting_on_review`) — a deliberate pause, not a lost run > - Recovery's staleness gate mistook that deliberate park for a disappeared run: it retried once, then escalated the issue to `blocked` with a recovery action and an operator-facing failure notice — even though nothing had failed and there was nothing for a human to do > - The user is left staring at an inscrutable, over-technical "stranded" error on a task they did nothing wrong with, with no idea what action to take > - This pull request teaches recovery to recognize a review-parked continuation and, when the issue has a real waiting target (open sub-tasks or unresolved blockers), convert it into a first-class dependency wait: `blocked`-by-children, original assignee kept, plus a plain-language comment saying it will resume automatically > - The benefit is that post-decomposition umbrellas sit on a real waiting path and self-resume through the normal blockers-resolved flow, while genuine strands (no waiting target) still escalate exactly as before ## Linked Issues or Issue Description Refs #6503 ## What Changed - `server/src/services/recovery/service.ts`: add `resolveContinuationWaitingOnReview`. When a continuation was cancelled with `issue_continuation_waiting_on_review` and the issue has a real waiting target — open (non-terminal) sub-tasks or existing unresolved blockers — recovery sets the issue `blocked` by those issues, keeps the original assignee, posts a plain-language `system` comment, and logs the activity. Wired into `reconcileStrandedAssignedIssues` ahead of the escalation path, with a new `waitingOnReviewResolved` counter on the result. - With no waiting target, the code falls through to the existing escalation, preserving genuine stranded-run detection. - `server/src/__tests__/heartbeat-process-recovery.test.ts`: two new tests — (1) a review-parked continuation converts into a dependency wait on its open sub-tasks (done children excluded, no recovery issue opened, plain-language comment, raw error code never leaks), and (2) it still escalates when no open dependency remains. - `doc/execution-semantics.md`: document the "Deliberate wait is not a lost run" recovery rule and the requirement that a post-decomposition umbrella hold a first-class waiting path rather than relying on `parentId` rollup. ## Verification - `cd server && npx tsc --noEmit` — passes against current `master`. - New tests in `server/src/__tests__/heartbeat-process-recovery.test.ts` (describe: "heartbeat orphaned process recovery"): - "converts a continuation parked for review into a dependency wait on its open sub-tasks" - "still escalates a continuation parked for review when no open dependency remains" - Run with the repo's vitest setup, e.g. `pnpm vitest run server/src/__tests__/heartbeat-process-recovery.test.ts` (requires the embedded-postgres test harness). ## Risks Low. The change adds a single guarded pre-check ahead of the existing escalation path; behavior is unchanged when the cancellation error code is not `issue_continuation_waiting_on_review` or when the issue has no open sub-task / unresolved blocker to wait on. No schema or migration changes. ## Model Used Claude (Anthropic), Opus-class model, via the Claude Code agent harness — extended thinking and tool use enabled. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [ ] If this change affects the UI, I have included before/after screenshots (N/A — server-only) - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green (pending CI) - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge |
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a71c4b6782 |
[codex] feat(watchdog): add task watchdog control plane (#8339)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The task lifecycle and recovery subsystems decide when agent work is still productive, stalled, or ready for review. > - Existing recovery paths can observe stopped or incomplete work, but there was no first-class per-task watchdog model with scoped review permissions. > - Watchdog follow-ups also need strict boundaries so recovery/status-only runs cannot mutate approvals or perform deliverable work. > - This pull request adds the task watchdog data model, API/service layer, scheduler/review flow, adapter wake context, UI configuration surfaces, and docs. > - The branch has been rebased onto current `paperclipai/paperclip` `master`; the watchdog migration is now ordered after master's latest migrations as `0104_issue_watchdogs`. > - The benefit is a more explicit task-review loop that preserves Paperclip's single-assignee and governance invariants while making stalled work easier to route. ## Linked Issues or Issue Description No linked GitHub issue. Paperclip task: [PAP-11275](/PAP/issues/PAP-11275). ## Problem or motivation Task recovery needs a first-class watchdog path that can inspect stopped work and create scoped follow-ups without bypassing normal task ownership. Board/UI users need a way to configure watchdogs on tasks and see watchdog-related live work. Recovery/status-only runs must remain limited to status reporting and must not create approvals, link approvals, or submit approval comments. ## Proposed solution Add a task-watchdog data model, scheduler/classifier, scoped mutation guard, adapter wake context, API/UI configuration surfaces, and documentation so watchdog agents can review stopped task subtrees under explicit boundaries. ## Alternatives considered Reuse the existing recovery-action flow only. That would keep stopped-work detection implicit, make per-task watchdog assignment harder to expose in the UI, and would not provide a durable scoped-review issue for stalled task trees. ## Roadmap alignment This is Paperclip control-plane lifecycle infrastructure for task execution and recovery. I checked `ROADMAP.md`; this PR does not duplicate an existing planned core item. ## What Changed - Added issue watchdog schema, migration, shared contracts, validators, CRUD API, and service support. - Added task watchdog scheduler/classifier behavior, scoped mutation enforcement, adapter wake context, and default watchdog mandate guidance. - Added UI surfaces for configuring watchdogs on new/existing tasks, viewing watchdog activity, and exposing the experimental setting. - Added docs for the user-facing task watchdog workflow and implementation semantics. - Gated new-task watchdog setup behind `enableTaskWatchdogs` and blocked cheap status-only recovery runs from approval mutations. - Rebased onto current `master` and renumbered the idempotent watchdog migration from the branch-local `0102_issue_watchdogs` slot to `0104_issue_watchdogs`. - Addressed Greptile feedback by loading watchdog classifier input with a recursive subtree query and centralizing the watchdog origin-kind constant. - Added and updated focused server/UI tests for watchdog routes, scheduler/classifier behavior, scope boundaries, live task visibility, settings, and new issue dialog behavior. ## Verification - `pnpm vitest run server/src/__tests__/task-watchdogs-scheduler.test.ts server/src/__tests__/task-watchdogs-classifier.test.ts` - `pnpm vitest run server/src/__tests__/approval-routes-idempotency.test.ts server/src/__tests__/issue-agent-mutation-ownership-routes.test.ts` - `pnpm vitest run ui/src/components/NewIssueDialog.test.tsx` - `pnpm --filter @paperclipai/server typecheck` - `git diff --check` - Verified the PR diff does not include `pnpm-lock.yaml` or `.github/workflows`. ## Risks - Medium risk: this introduces a new task lifecycle surface touching DB schema, server routes/services, adapter wake context, and UI task configuration. - Watchdog scheduling behavior depends on the new experimental setting and runtime context checks behaving consistently across local and production agents. - The watchdog migration is idempotent (`IF NOT EXISTS` / duplicate-object guards) so users who tried the previous branch-local migration number should not get duplicate-object failures. - CI and the second Greptile pass are pending after the latest review-fix push. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used OpenAI Codex, GPT-5-class coding agent in the Paperclip workspace. Exact runtime model id and context window were not exposed to the agent; tool use and local command execution were enabled. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots — N/A per Paperclip task instruction: do not add screenshots/images to this PR unless they are specifically part of the work. - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com> |
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fc95699fde |
fix(server): enforce agent secret binding sync across lifecycle flows (#8307)
## Thinking Path > - Paperclip is the control plane people use to create, configure, and run AI agents for work. > - This change sits in the server-side agent lifecycle and secret-binding subsystem, where adapter config `env` entries can reference company secrets. > - An incident (while trying to configure a Novita sandbox) showed that an agent can reach a broken runtime state if `adapterConfig.env` contains `secret_ref` entries but the matching `company_secret_bindings` rows are missing. > - The immediate run-path guard and error-surfacing work made the failure diagnosable, but they did not fully prevent new broken agents from being created. > - The risk came from create and approval flows being responsible for remembering to sync bindings at each call site, which is easy to miss as new flows are added. > - This pull request moves the invariant into `agentService` create/update/activate paths, keeps the existing hire-flow fix, and adds regression coverage for create, update, and legacy pending-approval recovery. > - The benefit is that agent secret binding integrity is enforced closer to the data mutation point, so future callers inherit the protection automatically. ## Linked Issues or Issue Description Refs #8309 ### What happened? A Paperclip agent could persist `adapterConfig.env` `secret_ref` entries without matching agent-scoped `company_secret_bindings` rows. When that happened, the config UI could still look configured, but the real run path failed pre-dispatch because the secret was not actually bound to that agent. ### Expected behavior Every normal agent create, config-update, and pending-approval activation flow should leave the agent with secret bindings that match its persisted secret-ref env config. ### Steps to reproduce 1. Create or activate an agent through a flow that persists `adapterConfig.env` secret refs without synchronizing `company_secret_bindings`. 2. Observe that the config state can still appear populated. 3. Start a run for that agent. 4. Observe that pre-dispatch binding validation fails because the secret reference exists but the agent binding does not. ### Deployment mode Local dev (`pnpm dev`) ### Installation method Built from source (`pnpm dev` / `pnpm build`) ### Agent adapter(s) involved - Claude Code - Not adapter-specific (core bug) ### Database mode Embedded PGlite / embedded local dev database flow ### Access context Board (human operator) created or approved the agent; agent runtime later consumed the config. ### Additional context This PR focuses on preventing new broken states from normal service flows and on backfilling the covered legacy pending-approval activation path. ## What Changed - Kept the existing branch-local hire-flow fix that synchronized bindings for route and approval paths. - Moved the binding integrity invariant into `agentService.create()`, `agentService.update()` when `adapterConfig` changes, and `agentService.activatePendingApproval()`. - Added `server/src/__tests__/agents-service-secret-bindings.test.ts` covering create-time sync, update-time resync, and backfill for legacy pending-approval agents. - Removed now-redundant route-layer and approval-layer binding sync calls once the service layer became authoritative. - Simplified the affected unit tests so route/approval tests no longer assert service-owned binding writes directly. ## Verification - `pnpm --filter @paperclipai/server typecheck` - `pnpm exec vitest run server/src/__tests__/agents-service-secret-bindings.test.ts server/src/__tests__/approvals-service.test.ts server/src/__tests__/agent-skills-routes.test.ts` ## Risks - Low to medium risk. - This changes where secret-binding synchronization is enforced, so any unexpected caller that relied on upper-layer manual sync behavior could behave differently. - Agent create/update/activation flows now perform binding synchronization consistently, which adds binding-table writes at those mutation points. - This PR does not retroactively scan and heal every already-broken historical agent row; it prevents and backfills through the covered service flows. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex / GPT-5 Codex class model via `codex_local` - Session model family: GPT-5 Codex - Tool-assisted coding with shell, git, HTTP, and local test execution - Reasoning mode: medium interactive tool-use workflow ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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f3db7b88ea |
Clear stale checkoutRunId on run finalization and add backstop sweeper (#6008)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The issue subsystem holds per-row lock columns (`checkoutRunId`, `executionRunId`, `executionAgentNameKey`, `executionLockedAt`) that gate checkout, ownership, and release > - When a heartbeat run terminates, `releaseIssueExecutionAndPromote` clears the execution-lock columns but stale checkout locks could remain attached to dead runs in edge paths > - The original fix closed the finalization, checkout, release, and sweeper paths, but PR CI exposed one more process-loss retry path where a queued retry advanced `executionRunId` while leaving `checkoutRunId` pinned to the failed run > - This pull request closes the asymmetry: terminal-run cleanup and process-loss retry recovery release dead checkout locks while preserving live execution ownership > - The benefit is permanent, automatic self-heal of stale lock columns and fewer false checkout 409s requiring board intervention > - Related upstream issue: #6007 ## Linked Issues or Issue Description Refs #6007. Duplicate/related PR search performed on 2026-06-10 with query `checkoutRunId process loss retry stale checkout lock repo:paperclipai/paperclip`. Related PRs found and reviewed for overlap: - #7727 `fix(heartbeat): atomically advance checkoutRunId on process-loss retry` - #7707 `test: cover same-agent stale checkout adoption` - #3068 `fix: clear checkoutRunId when releasing issue execution lock` ## What Changed - `server/src/services/heartbeat.ts` `releaseIssueExecutionAndPromote`: extend the per-issue update to also null `checkoutRunId` when it matches the terminating run id. WHERE clause scoped to `executionRunId = run.id OR checkoutRunId = run.id` for idempotence. - `server/src/services/heartbeat.ts` process-loss retry: when queuing the retry run, move `executionRunId` to the retry and clear the failed run's `checkoutRunId` so the dead run no longer owns checkout. - `server/src/services/issues.ts`: add `clearCheckoutRunIfTerminal` helper, symmetric to `clearExecutionRunIfTerminal`. No assignee/status precondition. Wired into `checkout`, `assertCheckoutOwner`, and `release`. Exported on the issue service. - `server/src/services/recovery/service.ts`: add `sweepStaleIssueLocks`. Scans `issues` where `checkoutRunId IS NOT NULL OR executionRunId IS NOT NULL`, joins each referenced run, and clears all lock columns on issues whose referenced runs are all terminal or missing. Emits one `issue.stale_lock_cleared` activity log row per cleared issue. - `server/src/services/heartbeat.ts`: re-export the sweeper on the heartbeat facade. - `server/src/index.ts`: invoke `sweepStaleIssueLocks` in both the startup recovery sequence and the periodic heartbeat timer chain. - Tests: route-level coverage of the new self-heal path on the next checkout attempt, service-level sweeper coverage, and heartbeat recovery assertions that terminal process-loss cleanup releases `checkoutRunId`. ## Verification ```bash pnpm --filter @paperclipai/server typecheck pnpm --filter @paperclipai/server exec vitest run \ src/__tests__/recovery-stale-issue-lock-sweep.test.ts \ src/__tests__/issue-stale-execution-lock-routes.test.ts NODE_ENV=test pnpm exec vitest run src/__tests__/heartbeat-process-recovery.test.ts -t "queues exactly one retry when the recorded local pid is dead|does not block paused-tree work when immediate continuation recovery is suppressed by the hold" NODE_ENV=test pnpm exec vitest run src/__tests__/heartbeat-process-recovery.test.ts ``` All listed local checks pass. The new and updated tests cover: - Run termination clears `checkoutRunId` when it points at the terminating run. - Process-loss retry clears the failed run's `checkoutRunId` while assigning `executionRunId` to the queued retry. - A different agent calling `POST /api/issues/:id/checkout` on an issue whose prior owner died self-heals via `clearCheckoutRunIfTerminal` and succeeds. - Sweeper clears stale lock columns for issues whose run row is terminal. - Sweeper leaves issues alone while the referenced run is still running. - Sweeper leaves issues alone when `executionRunId` is still running even if `checkoutRunId` is terminal. - Sweeper is idempotent; second pass clears nothing. Manual reproduction of the original bug shape: 1. Create an issue assigned to agent A, set `status='in_progress'`, `checkoutRunId=R1`, `executionRunId=null`, where `heartbeat_runs.status = 'failed'` for `R1`. 2. Reassign to agent B and move to `status='todo'`. 3. Before this PR: agent B `POST /checkout` returns `409 Issue checkout conflict` indefinitely. After this PR: succeeds, lock columns rewritten to agent B's current run id. ## Risks - Low. All clears are scoped by run id, so they only fire when the lock column unambiguously points at the terminating or terminal run. No schema change. No migration. No API surface change. - Behavioral shift: an issue that previously stayed `in_progress` with a dead `checkoutRunId` after run termination now self-heals. Downstream code that reads stale `checkoutRunId` as a proxy for recent run history should already be reading `executionRunId` or the `heartbeat_runs` table. - Sweeper cost: one indexed scan per recovery tick over rows where `checkoutRunId IS NOT NULL OR executionRunId IS NOT NULL` plus a single batched `heartbeatRuns` lookup per candidate. Negligible at expected cardinality; further bounded by the existing recovery cadence. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. This is a bug fix, not a feature. No roadmap overlap. ## Model Used - Claude (Anthropic), model ID `claude-opus-4-7`, extended-thinking off, tool use enabled. - OpenAI Codex, GPT-5-based coding agent, tool use enabled, used for the follow-up process-loss retry fix and PR body update. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [ ] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> Co-authored-by: Dotta <bippadotta@protonmail.com> |