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74ba530b9e |
fix(workspaces): keep cleanup Git scans fresh and dedupe page reads (#16302)
## Thinking Path > - Paperclip manages execution workspaces for agent tasks. > - It must preserve work when it closes a workspace. > - The terminal-workspace worker checks Git before it decides whether a workspace can close. > - A request for fresh Git status could join a scan that started before a file changed. > - Several records for one directory can also repeat the same Git work in a bounded page. > - The worker already reads the task tree before Git, then reads it again for delivery assessment. > - This pull request fixes the fresh-read boundary and removes those repeated reads. ## Linked Issues or Issue Description - Refs #14759 and #14423 for the background Git scan load. - Refs #16282 for the merged event-driven terminal-workspace worker. - Refs #13619 for the original community investigation and tests. Thanks to @fayonation for identifying the shared-directory and in-flight scan cases. This implementation starts from current master and adapts those ideas to the new worker. ## What Changed - Give correctness-sensitive Git status requests their own scheduler scan. They skip completed cache entries and older scans in progress. - Share compatible Git readiness results across workspace records in one bounded worker page. The key includes company, path, branch, base ref, and runtime ownership. Each record keeps its own task and delivery assessment. - Reuse the task tree already read by the worker during delivery assessment. - Add regression tests for a file created during an older scan, compatible scan sharing, and company and branch separation. Update developer and workspace map documentation. ## Verification - `pnpm exec vitest run server/src/services/workspace-git-operation-scheduler.test.ts server/src/__tests__/execution-workspaces-service.test.ts` — 92 tests passed. - `pnpm -r typecheck` — passed with the repository's pnpm 9.15.4. - `node scripts/check-maps.mjs` — passed. - `pnpm build` — passed. - The full local `pnpm test:run` was interrupted when its original worktree disappeared. All PR test shards passed in GitHub CI. - Latest commit `e7622127c7d978a9a90857112675834725965d72`: 53 successful PR checks, 2 expected skips, and no failures. Greptile reviewed this commit at 5/5 with no open findings. ## Risks - A shared page inspection can become stale if the directory changes before the next record is assessed. The final cleanup still starts a separate Git scan and checks current task, ownership, and lifecycle state under the existing guards. - The new scan key changes request coalescing for correctness-sensitive callers. They still use the scheduler's concurrency and queue limits. There is no database migration or API change. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI GPT-6 through Codex, with reasoning, code editing, and shell tools. The exact serving model ID and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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bd64eb27b0 |
perf(recovery): use indexed execution identity lookups (#16291)
## Thinking Path > - Paperclip manages AI agents and their execution. > - Recovery must keep old execution ownership visible before new work starts. > - Ownership reads filter large run contexts through a combined text expression. > - Recovery and status delivery also cast indexed UUID columns to text. > - These reads can scan history before finding the requested execution. > - This pull request preserves identity and ownership rules while using existing indexes. > - The benefit is less database work during recovery and task polling. ## Linked Issues or Issue Description Refs #14406. Related community report: #15275. This is an independent implementation. It does not use that pull request's code or commits. It covers the reported execution joins and the additional ownership query hotspot. **What happened?** Accumulated staging query statistics showed 11,782 ownership reads at 51 ms each. A paired recovery-action read averaged 22 ms. Both queried large run JSON. Text casts also prevented indexed UUID lookups in recovery and status delivery. **What did you expect to happen?** Recovery must find the same execution evidence through existing indexes. Malformed identifiers must match nothing without a cast error. Native issue bindings must retain precedence. Missing termination evidence must continue to block new work. **Steps to reproduce** Run the disposable benchmark below. It loads the original service modules from the baseline revision. It compares their exact ownership, blocker action and status-delivery SQL with the current modules on 1,400 synthetic runs, 350 historical recovery actions and 192 KiB contexts. ## What Changed - Convert saved text to UUID only after checking its canonical lowercase form. - Keep indexed run and task UUID columns unchanged in execution joins. - Split native and legacy issue predicates so existing indexes can filter ownership candidates. - Preserve company scope, native precedence, process and lease holds, recovery eligibility and delivery receipts. - Add real PostgreSQL identity and ownership regressions, a reproducible benchmark and database documentation. ## Verification - Local service SQL benchmark: ownership 78.30 ms to 1.14 ms, with the same two complete rows. Blocker action read 76.94 ms to 22.55 ms, with the same complete row. These are synthetic SQL timings, excluding process probes, provider calls and HTTP. - Status delivery returned the same 100 rows. Timing was neutral on the small-task fixture: 7.85 ms before and 8.30 ms after. No speedup is claimed for that case. - 231 local tests passed across six server suites. They cover malformed identifiers, canonical spelling, company scope, native precedence, retained processes, workspace restore, native replacement, conversations and delivery. - `pnpm -r typecheck` and `pnpm build` passed. - `git diff --check` passed. - All current-head CI and security checks passed, including the full general and serialized suites, browser shards, Runner verification and build. Greptile reviewed the exact commit at 5/5 with no actionable findings. - The older full local sweep in the companion worktree was stopped after final-commit complete CI passed. It is not claimed as a completed local pass. The 231 focused tests above passed locally on this branch. ```sh pnpm --filter @paperclipai/server exec vitest run src/services/conversation-continuation.test.ts src/services/legacy-execution-recovery.test.ts src/__tests__/legacy-workspace-restore-recovery.test.ts src/__tests__/chat-completion-delivery.test.ts src/__tests__/agent-conversations.test.ts src/services/native-runtime/native-safe-replacement.test.ts pnpm --filter @paperclipai/server exec tsx ../scripts/benchmark-recovery-queries.ts --baseline-ref=1e731520bb ``` ## Risks - PostgreSQL accepts more UUID spellings than the old text joins. The explicit guard preserves the old lowercase spelling requirement. - Query plans depend on the data distribution. Small task sets can show neutral status-delivery timing. The benchmark is not a production latency claim. - Recovery ownership checks remain conservative. Process, lease, workspace and no-replay rules are unchanged. - No migration, new index, cache, cleanup change or lock removal is included. ## Model Used OpenAI GPT-6 through Codex, with reasoning, repository inspection, shell tools and local code execution. The runtime does not expose a more specific backend model ID or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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ebeac833a6 |
perf(runs): bound history and reduce repeated context reads (#16286)
## Thinking Path > - Paperclip helps operators manage AI agents and inspect their work. > - Run history supplies recent execution records to the board and API clients. > - The list repeats eight reads of a large stored JSON context. > - A caller can also omit the limit and read the complete history. > - This pull request expands context fields once and bounds every list read. > - The benefit is lower database cost and bounded redaction work. ## Linked Issues or Issue Description Refs #958. Related community reports: #13962 and #10631. This is an independent implementation. It does not use their commits or code. It covers the history bounds reported in both. Process memory monitoring from #10631 is outside this change. **What happened?** The run-history query repeatedly extracts fields from large context JSON. Requests without a limit also load every historical run before authorization and redaction. Accumulated staging query statistics showed 271 ms for summary history and another 58 ms for its redaction lookup. **What did you expect to happen?** Normal reads must use a bounded recent history. Context projection must preserve the existing values and privacy behavior with less repeated database work. **Steps to reproduce** Run the disposable benchmark below against the baseline revision. It creates 1,400 synthetic runs with 192 KiB contexts. It compares the exact service SQL and every returned column for both summary and full history. ## What Changed - Expand context fields with one lateral record projection. Preserve non-object legacy contexts and the first-class issue binding. - Enforce a 200-row default and a 1,000-row maximum in the route and service. - Apply the default in the shared UI client, including both agent detail implementations. - Preserve response arrays, authorization, result projection and secret redaction. - Fetch older linked runs by ID in both agent pages. Check company and agent scope, navigation races and visible retry errors. - Update OpenAPI, data-path documentation and capability maps. - Add real PostgreSQL and HTTP regressions plus a reproducible benchmark. ## Verification - Local benchmark: summary history 37.72 ms to 19.34 ms; full history 37.84 ms to 19.01 ms. All 200 complete positional rows match in each comparison. These are synthetic local SQL timings, excluding HTTP and redaction. - History, route, privacy and redaction suites: 160 server tests passed across six files. Twenty-two UI API, selection, run-panel and log-visibility tests passed. Both agent-page variants render an older linked run with an empty history page on desktop and mobile. - `pnpm -r typecheck` and `pnpm build` passed. - Map validation and `git diff --check` passed. - All current-head CI and security checks passed, including the full general and serialized suites, browser shards, Runner verification and build. Greptile reviewed the exact commit at 5/5 with no remaining findings. - The full local sweep began before the final compatibility fixes. It was stopped after the final commits passed complete CI. The focused local suites listed above passed on the final code. Before interruption, the broader local sweep passed 31,743 tests across the general server, UI and several package groups, with no reported failures. The full local command is not claimed as a completed pass. ```sh pnpm --filter @paperclipai/server exec vitest run src/services/heartbeat/run-state.test.ts src/__tests__/heartbeat-list.test.ts src/__tests__/agent-live-run-routes.test.ts src/__tests__/run-secret-redaction.test.ts src/__tests__/heartbeat-run-privacy-routes.test.ts pnpm --filter @paperclipai/ui exec vitest run src/api/heartbeats.test.ts pnpm --filter @paperclipai/server exec tsx ../scripts/benchmark-run-history.ts --baseline-ref=1e731520bb ``` ## Risks - Clients that relied on an unbounded array now receive 200 rows by default. Explicit limits allow up to 1,000. This change does not add pagination. - Legacy context conversion must stay identical. Real database regressions cover null, array, scalar, nested values and native issue precedence. - No schema migration or persistent cache is introduced. Redaction and access checks remain active. ## Model Used OpenAI GPT-6 through Codex, with reasoning, repository inspection, shell tools and local code execution. The runtime does not expose a more specific backend model ID or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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03fcd3c1fb |
fix(native-runtime): report which close barrier failed (#16298)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Native agent runs use the Paperclip runner. When a run ends, the controller closes the session. Close must prove that the runner durably suspended before the controller releases its checkpoint. > - If close cannot prove this, the run fails with `provider_transport_failed: runner did not durably suspend before checkpoint`. > - The runner knows which barrier was not proven. It writes that settlement only to the instance run log. > - The Sentry report for the failed run has no settlement evidence. Operators cannot tell a stuck suspend command from an undrained provider, an unreadable provider state, or unsettled tool results. > - This pull request sends that settlement to the run failure report as closed labels and counts. > - The benefit is that the next occurrence shows which barrier failed, so the root cause can be fixed instead of guessed. ## Linked Issues or Issue Description No public issue exists. This describes the bug. **What happened?** Hosted staging native Codex runs failed with `provider_transport_failed: runner did not durably suspend before checkpoint`. This happened on two runs, on 2026-09-30 and 2026-10-14. The second run used a release from 2026-10-14. The Sentry events contain only the error code, run phase, driver kind, and duration. They contain no stack and no settlement data. The native executor calls `reportRunFailure(db, run)` without the caught error, and the runner settlement is never read. **Expected behavior** A failed close report should tell an operator which barrier was not proven: runner suspension, provider drain, provider state, or semantic tool settlement. It must not expose tool identities, digests, provider turn IDs, or unredacted error text. **Steps to reproduce** 1. Run a native Codex session whose close cannot prove durable runner suspension. For example, the runner suspend command does not complete before the close deadline. 2. Observe the Sentry run failure event. Before this change, `run_execution` has no close settlement fields. ## What Changed - `collectRunFailureDiagnostics` accepts a new `nativeCloseFailure` option. It reads only a `native_session_close_unrecoverable` error, directly or up to four `cause` levels deep. - It adds closed labels and counts to `run_execution`: `closeRunnerSuspended`, `closeProviderDrained`, `closeSuspendCommandStatus`, `closeRunnerLifecycle`, `closeRunnerIdentityMatches`, `closeProviderState`, `closeProviderPendingEventCount`, `closeProviderTurnActive`, `closeSemanticResultPersistenceFailed`, `closeSemanticToolsPending`, `closeSemanticToolDeliveriesOpen`, and `closeSemanticResultFailures`. - Values outside the known vocabularies are dropped. Getters that throw are contained. - The native session executor passes the caught error as `nativeCloseFailure` when it reports a terminal run failure. It does not pass the error as `error`, because the raw error text and stack bypass the executor's identity redaction. - `doc/observability.md` documents the new fields and the privacy boundary. ## Verification - `cd server && npx vitest run src/services/__tests__/run-failure-diagnostics.test.ts src/__tests__/run-failure-sentry.test.ts`: 130 tests pass. - New tests check the full label set, a wrapped cause, null suspension and provider states, unrelated error codes, hostile and unknown values, and a missing settlement. They also check that no tool identity, digest, turn ID, or error text leaves the module. - Negative control: with the reader disabled, the new main test fails. - A scoped `tsc` run on `run-failure-diagnostics.ts`, its test, and `run-failure-report.ts` passes. The full server `tsc` and `pnpm build` were not run locally. The sandbox has a 4 GiB memory limit and no `cargo` for the runner binary. CI runs the full checks. ## Risks - Low risk. The change only adds Sentry context fields for one error code. Close, quarantine, retry, and recovery behavior do not change. - Sentry grouping does not change. The fingerprint stays `[errorCode, agentAdapter]`, and no exception chain is added. - The data path is Observability (Sentry error reporting, gated by the operator DSN). It does not change Telemetry. The fields contain only booleans, fixed labels, and counts. The DSN gate is unchanged. - These fields are observations. They do not prove a root cause by themselves. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - Anthropic Claude Opus 5.5 (`claude-opus-5-5`), run through Claude Code as an agent with tool use (shell, file edits, test execution, Sentry and GitHub connectors). Context window and reasoning mode are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-authored-by: Devin Foley <139239+devinfoley@users.noreply.github.com> Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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df4ee06e2f |
feat(skills): select and validate tracked GitHub branches (#16288)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Skills can track a branch in an authorized GitHub repository. > - Sources previously offered only a default-branch repair action. > - People need to select a listed branch or enter a branch that GitHub has not listed. > - The server must validate the selected ref with the caller's authorized connection. > - This pull request connects the approved branch picker to production APIs. > - Installed skills remain usable while the source changes its tracked ref. ## Linked Issues or Issue Description **Subsystem affected** Skills UI, shared API contracts, GitHub source services, and agent API discovery. **Problem or motivation** The default-branch repair action does not let people choose another branch. The settings service also validates the old ref when a caller supplies a new ref other than HEAD. A missing tracked branch can prevent connection repair even when the selected account has repository access. **Proposed solution** Load a bounded branch list with the authorized connection. Mark the default branch. Search listed branches or accept a typed ref. Validate the selected ref before saving. Keep the chosen value after a load error, invalid ref, or concurrent update. Save the selected connection and branch together during connection repair. **Alternatives considered** A default-branch button does not support a named branch. A text field alone does not help people find the repository default or available branches. **Roadmap alignment** This improves the existing Skills source manager. It does not add a new skill import system. **Additional context** Refs #16066 and #16256. This is the production implementation of the approved branch-selection Storybook journeys. ## What Changed - Add an authorized branch-list endpoint and shared response/query types. Register it in agent API discovery. - Validate the requested ref, including the returned commit SHA. Preserve source leases, revision checks, project ownership, skill identities, selections, and installed versions. - Add the searchable branch picker to Sources and connection repair. Allow typed refs during branch discovery and after discovery fails. - Keep save errors in the dialog. Retain the selected branch through a concurrent source update. - Use the production components and API client in Storybook. Add keyboard, touch, loading, retry, invalid-ref, connection-repair, and concurrent-update browser journeys. - Update product documentation and the feature/access maps. ## Verification - Red/green: two new database regressions fail against the previous service and pass against the implementation. - Linux database/service suite: 85 tests passed. This includes source visibility, human/agent authorization, selected connections, immutable versions, and invalid refs. - Rebased branch and review fixes: 94 focused UI, route, branch-validation, and fixture tests passed. Two conflict-message regressions and the stale-retry fixture regression fail before the fix and pass after it. - Storybook build passed. All 26 focused browser journeys passed. - Repository typecheck and build passed. Final UI typecheck passed after the review fixes. - The full local Vitest run was interrupted when the checkout and its dependencies disappeared. It reported missing working-directory/Postgres files and worker startup errors. Its two timed-out tests pass after the checkout was restored. The complete CI suite passed on the final head, `cf5d4c8f0a`: [CI run](https://github.com/paperclipai/paperclip/actions/runs/38571068332). One unchanged workspace timestamp test required a single rerun. Its release-minus-one-millisecond value can equal the original confirmation time. The rerun passed. - Live acceptance passed on implementation head `5dd935bf14` in an isolated macOS arm64 instance with Node 24.21.0 and an authorized private GitHub repository. The UI loaded the actual default branch, saved branch and selected connection together, and preserved the installed skill/version IDs after reload. An invalid typed ref retained the draft and showed the provider error. A valid typed HEAD ref then saved successfully. The owned runtime and database were stopped after the test. Focused unit, Linux database, and browser suites passed again after the error-handling review fixes. - Greptile reviewed final head `cf5d4c8f0a` at 5/5. Both review threads are resolved; the fresh review has no remaining findings. - Token gates and map/catalog checks passed. - Review entry points: `Skills / Project repository skills / 03 Branch selection components` and `04 Branch selection journeys`. Run `pnpm storybook` to inspect them. - Browser command: `pnpm exec playwright test --config tests/storybook-visual/playwright.config.ts tests/storybook-visual/skill-source-branch-selection.spec.ts tests/storybook-visual/project-repository-skills.spec.ts`. - Manual check: open an independent GitHub source, choose a new branch, select the default or type a ref, save, and reload. Try an invalid ref and confirm the selection remains in the dialog. For a project-bound source, change its ref in project settings. ## Risks - GitHub discovery is bounded to 100 listed branches. The default branch is always included. Typed refs remain available. - A source can change while the dialog is open. The API rejects a stale revision and the UI keeps the draft for retry. - A ref change schedules the existing refresh pipeline. Installed versions remain available until a successful refresh imports new content. - No database migration or credential storage change is required. Existing HEAD requests remain supported. ## Model Used OpenAI Codex, GPT-6 family. The serving model's exact identifier and context-window size are not exposed in this session. Used reasoning, repository tools, code execution, and browser tools. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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d4892d4761 |
fix(observability): sample native runs independently of triggers (#16285)
Start native background run traces under the operator's root sampling policy and link them to valid trigger contexts. Preserve child parenting and silent unconfigured tracing. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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f69c6a8a35 |
fix(github): retry and recover review publication (#16284)
## Thinking Path
> - Paperclip manages agent work and its published results.
> - GitHub review bots publish task-bound assessments through governed
tools.
> - A review can survive a caller timeout because its publication intent
is durable.
> - A transient provider failure still returned a failed receipt before
recovery.
> - Gateway replay could return an empty cached result, and publication
retries had no dedicated scheduler deadline.
> - This pull request adds bounded retries, receipt recovery, and an
independent durable worker.
> - A temporary GitHub failure can recover without another review or
duplicate publication.
## Linked Issues or Issue Description
Refs #16275. That change increased the GitHub tool deadline. This change
repairs retry and recovery behavior.
**What happened?**
A one-off GitHub HTTP 503 or 429 left the caller with a failed
publication receipt. The saved retry did not have its own scheduler
worker. An identical gateway call after a timeout could return an empty
cached result instead of the saved publication receipt.
**Expected behavior**
Temporary failures should retry under current authority. Pending work
should resume at its saved deadline after restart. Exact retries should
return the current receipt. Lost responses must not create duplicate
comments, findings, or checks.
**Steps to reproduce**
1. Admit an advisory PR review request and begin its assessment.
2. Return HTTP 503 or 429 for the first summary-comment PATCH, then let
GitHub succeed.
3. Submit the assessment through the run-scoped tool gateway.
4. On master, the result says publication failed. With this change, the
same call returns the processed receipt and neutral check.
5. For receipt recovery, use a shorter caller deadline and repeat the
exact call after publication finishes.
**Paperclip version or commit**
Reproduced on master at `6cb6ac3b8e40cb90d734ba115a2f22f850ff9477`.
## What Changed
- Classify transient transport, server, and rate-limit failures. Honor
Retry-After and primary reset deadlines. Stop retries for permanent
permission and validation errors.
- Retry safe reads and installation-token issuance within a bounded call
window. Retry publication writes through the existing outbox and
provider receipt checks.
- Wait for up to three publication attempts within a 45-second retry
window. Keep the durable eight-failure cap and enforce saved deadlines
on explicit retries.
- Register an independent GitHub publication worker with
transaction-owned wake notifications, startup recovery, and per-PR lease
deadlines.
- Recover exact comment, progress, and assessment gateway calls from
their stored publication. Require the same company, agent, task, run,
connection, tool, arguments, and current policy. Clear stale timeout
errors after recovery. Approved exact retries read the current receipt
through the existing signed replay path; the worker retains the verified
approval for deferred writes and still rejects revocation.
- Add regression coverage and update the connector guide and
feature/access maps.
## Verification
- Red: both one-off HTTP 503 and 429 regressions failed on master with a
failed publication receipt.
- Green: the same tests passed after the change.
- GitHub review workflows: 133 covered against isolated PostgreSQL 18.
The final combined run passed 132 and hit one fifteen-second timeout
under concurrent build load. All three variants of that workflow passed
in isolation. The earlier combined run passed all 131 workflows before
the two approval regressions were added.
- Retry policy and delivery coordinator tests: 35 passed.
- Additional focused checks passed for the actual eight-failure cap,
exact-argument conflicts, policy revocation, and timeout receipt
recovery. The approved deferred-publication and revocation regressions
failed before the review repair and passed after it, with one approval
request preserved.
- `pnpm -r typecheck`: passed. `pnpm build`: passed. `node
scripts/check-maps.mjs`: passed.
- The broad local `pnpm test:run` path remains blocked by the host's
exhausted PostgreSQL shared-memory slots. The changed database-backed
workflows use an isolated Docker database instead. All Paperclip CI jobs
passed at
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7c016c049b |
perf(workspaces): wake terminal cleanup from committed changes (#16282)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Agents use execution workspaces to retain their files and Git branches. > - A reaper closes eligible workspaces after their task tree is terminal. > - The reaper scanned every heartbeat tick and read Git before cheap eligibility checks. > - Permanent scans also query idle databases when no cleanup work exists. > - This pull request wakes cleanup after transaction settlement and restores bounded work at startup. > - The benefit is fewer scans while fresh cleanup guards continue to protect retained work. ## Linked Issues or Issue Description Related work: Refs #13619, Refs #11753. Those PRs bound scans or back off unchanged candidates. This PR uses the transaction work coordinator to remove the permanent reaper tick. It overlaps their early terminal-state filtering but does not change their runtime restart behavior or introduce a second Git scheduler cache. **What existing behavior does this improve?** Terminal workspace cleanup and Git inspection for workspace detail reads. **Subsystem affected** Server orchestration, execution workspaces, and idle sleep admission. **Current behavior** The heartbeat tick scans workspace candidates every thirty seconds. It runs Git before rejecting nonterminal trees, cooldowns, and active runs. Display inspections expire after five seconds. **Proposed behavior** Recover workspace rows in bounded startup pages. Wake after relevant issue, workspace, and pull-request work-product transactions settle. Schedule the terminal tree cooldown or a five-minute eligibility retry. Back off unchanged candidates across unrelated wakes, and invalidate their backoff after relevant committed changes. Park empty and nonterminal-only lanes. Reuse display inspections for thirty seconds. Read fresh Git before destructive cleanup. **Reason and benefit** Avoid recurring database and Git work when no cleanup is possible. Retain transaction admission holds, restart recovery, and fresh deletion checks. Retention eligibility can wait for the next host wake; active and failed recovery work still blocks sleep. **Breaking changes** No schema or API shape changes. Display Git state can lag by thirty seconds. Cleanup eligibility retries can take five minutes. ## What Changed - Add a terminal-workspace worker to the existing transaction work coordinator and scheduler. - Signal relevant writes before mutation on the owning transaction. Outer transaction settlement wakes cleanup. - Derive cooldown deadlines from the full company-scoped terminal task tree. Continue bounded recovery pages without a permanent sweep. - Bound unchanged candidate inspections to five minutes, retain at most 256 entries, and invalidate affected entries with scoped transaction hints. Repeated wakes preserve the earliest inspection deadline. - Collect deadlines from task trees already read by bounded pages. Restore the cursor after a failed page and rescan commits received during a rotation. - Check terminal state, cooldown, and active runs before Git. Preserve lifecycle locks, generation fences, and fresh final checks. - Keep failed or incomplete recovery visible to idle admission. Preserve the passive retention exception. - Extend the bounded display cache to thirty seconds and document the scheduling and wake limits. ## Verification - Focused workspace, coordinator, cache, and local sleep suites: 111 tests passed with real local PostgreSQL and Git worktrees where applicable. - Final worker, display cache, and local sleep suites: 28 tests passed. - The regressions prove three ineligible workspaces invoke zero Git scans, cached clean display state cannot remove new untracked files, and real producer notifications wait for outer transaction settlement. - `pnpm -r typecheck` and `pnpm build` passed locally. Map and module-boundary checks passed. - Work-product and sleep-safety suites: 221 tests passed. Reopen and issue-tree control suites: 46 tests passed. Final backoff, workspace, worker, and work-product suites: 87 tests passed. - Final workspace and worker suites: 81 tests passed. Deadline selection performs zero database reads. A failed full page retries its unread terminal workspace before recovery can park. - Full CI coverage passed on head `2c397970f7`: general tests, serialized server suites, runner verification, E2E shards, typecheck, build, and the final verification gate. The duplicate serial local `pnpm test:run` was stopped after full CI coverage passed; it is not reported as a completed local pass. - Greptile: 5/5 with both findings resolved. The security scan also passed. No failing or pending PR checks remain. ## Risks - Display state can be stale for thirty seconds. Destructive guards bypass the display cache. - Undelivered or otherwise ineligible terminal work retries after five minutes instead of each heartbeat tick. - Transaction signals cover the owning `createDb` scope. Direct SQL and independent server processes require startup recovery. - Local cooldown timers are maintenance hints. They do not establish an external wake alarm or whole-instance sleep safety. Existing blockers remain in force; failed bounded recovery keeps the host awake. ## Model Used OpenAI GPT-6, model ID `gpt-6`, through Codex. Reasoning, repository inspection, shell execution, and browser tools assisted the change. The runtime does not expose the context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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1e731520bb |
fix(mcp): deduplicate discovered tool descriptors (#16281)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Agents receive governed app tools through the MCP gateway. > - GitHub review tasks can contain a PR discussion and inline finding threads. > - Discovery repeated each tool for every conversation linked to the task. > - Native tool registration treated these repeated descriptors as a fatal collision. > - This pull request lists GitHub tools once and deduplicates identical descriptors across providers. > - Agents can continue work while conflicting definitions and normal tool permissions remain enforced. ## Linked Issues or Issue Description **What happened?** A follow-up run on a GitHub review task failed with `assigned_mcp_tool_name_collision` before the provider started. The task had a main conversation and an inline finding thread. Discovery returned the same seven tools twice. Repeated descriptors from other providers could cause the same failure. **Expected behavior** Discovery exposes each identical tool once. Separate connection names remain separate tools. Conflicting definitions remain an error. Every call still passes the gateway's policy, approval, revocation, and audit checks. **Steps to reproduce** 1. Run a GitHub review and publish an inline finding. 2. Send a follow-up request on the same PR task. 3. Inspect the task-bound bot catalog and the next native startup. 4. Separately, return two identical descriptors from an assigned app or plugin catalog. Related: #13717 added the GitHub review workflow. ## What Changed - Use a distinct GitHub discovery query across conversations that share an endpoint and task. Keep both thread mappings. - Deduplicate identical gateway descriptors by their full gateway name across providers. Use this rule for MCP listings, plugin listings, assigned-tool startup, and fresh assigned-tool discovery. - Reject conflicting descriptors with `tool_name_collision`. Keep the projected-name collision guard. - Cover GitHub inline-thread discovery, repeated plugin/app tools, direct and on-demand catalogs, revocation, conflicting bindings, and separate connection names. - Update the execution contract, GitHub documentation, and agent access map. ## Verification - Regression baseline: six new assertions failed on the original implementation. GitHub returned fourteen entries, plugin discovery repeated a tool, and native startup failed on repeated app tools. - Focused verification passed: 272 GitHub cases, all 29 assigned-tool cases, and all 88 gateway acceptance cases. - `pnpm -r typecheck` passed. - `pnpm build` passed. - `node scripts/check-maps.mjs` passed. - Current-head CI passed: 55 checks passed, two inapplicable checks skipped. Greptile scored the current head 5/5 with no unresolved threads. - Full local `pnpm test:run` encountered a 15-second timeout in the existing bearer-auth throttling test, before tool discovery. That test passed in the separate 88-case gateway run and on one isolated rerun. The duplicate broad local run was then stopped; the complete current-head CI matrix passed. ## Risks - Deduplication keeps the first identical descriptor and preserves listing order. Same-name descriptors with different definitions fail with HTTP 409 rather than selecting an ambiguous binding. - The GitHub query changes result cardinality. It retains the existing task/company/agent filters and leaves conversation rows intact. - No schema migration or credential change. Live staging recovery requires deployment and a new authorized run. ## Model Used OpenAI Codex, based on GPT-6, with code inspection, editing, browser investigation, and test execution. The exact serving model ID and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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e9b6c4d44c |
perf: remove history scans from task and chat queries (#16278)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Task reads and external chat notices must remain responsive as run history grows. > - The chat notice sweep casts indexed UUID columns to text. > - Run redaction and task provenance filter large JSON contexts with expressions that lack matching indexes. > - These queries scan history and read large stored contexts on common requests. > - This pull request adapts two existing fixes to current master and adds the missing provenance index. > - The benefit is less database work with the same query results and access rules. ## Linked Issues or Issue Description Refs #15927. This change adapts that chat sweep fix to the extracted inbound notice module and retains the contributor credit. Refs #12499. This change adds that missing nested-context index through a current, concurrent migration. It retains the contributor credit. This combined change replaces those older layouts for the measured query paths. It also covers task creation provenance, which those pull requests do not address. **What happened?** The chat notice sweep scans wakeup history. Issue redaction scans run contexts because only one branch of its JSON condition has an index. The task creation-source filter also scans contexts because its native and legacy ID expression lacks an index. **Expected behavior** The queries use indexed lookups and return the same rows. Company access, task origin precedence, secret redaction, and chat notice ordering remain the same. **Steps to reproduce** Run `pnpm --filter @paperclipai/server exec tsx ../scripts/benchmark-slow-queries.ts --baseline-ref=f8af817f8d`. The benchmark creates disposable PostgreSQL data and compares the old query with the current query on the same fixture. ## What Changed - Compare chat UUID columns directly with safely parsed payload IDs. Reject malformed and noncanonical IDs without a cast failure. - Add the nested `paperclipIssue.id` run-context index and the exact native/legacy task-provenance expression index. - Build both indexes concurrently. Register the migration for top-level execution and invalid-index retry repair. - Extend chat payload and migration regression coverage. - Add a repeatable synthetic SQL benchmark and document its scope and command. - Keep the five newest schema snapshots. ## Verification - Focused local checks: 76 selected tests passed in five files. These cover FIFO notices, malformed IDs, conversation state, redaction, provenance, and company boundaries. - Disposable PostgreSQL 18.1 fixture: 335 tasks, 1,400 runs, 13,000 wakeups, 377 actions, and 192 KiB synthetic contexts. - Five warm samples per query, after two warmups. Every returned SQL column matched before and after, compared as positional tuples so duplicate unnamed projections are retained. | Query | Before, median | After, median | Improvement | | --- | ---: | ---: | ---: | | Chat notice candidates | 26.21 ms | 6.43 ms | 4.1× | | Task creation-source list | 159.69 ms | 6.51 ms | 24.5× | | Issue redaction contexts | 131.88 ms | 0.34 ms | 389.1× | The run-history context projection returned the same 200 rows and kept the same index plan and buffer counts. Its timings were noisy (37.30 ms before and 56.78 ms after in the last run; 34.25 ms and 34.14 ms in the previous run). No improvement is claimed for this control. Its repeated JSON projection remains a separate optimization opportunity. The populated plans use the wakeup primary key, the provenance expression index, and a BitmapOr over both redaction indexes. These are local SQL measurements. They do not prove an equivalent change in hosted API latency. - `pnpm -r typecheck` and `pnpm build` passed locally. - The full local `pnpm test:run` was started and then interrupted (exit 130) when the Mac reached its PostgreSQL shared-memory limit. It did not complete and is not reported as passed. The final SQL benchmark passed after its disposable database resources were released. The full general and serialized test suites passed in CI. - All CI checks for final head `193acca6abaa992acad12f4b631bd31dd3234641` passed, including full Vitest coverage, E2E checks, typecheck, build, migration order, and lifecycle boundaries. - Greptile reviewed that exact head at 5/5 with no actionable comments. ## Risks - Both indexes add storage and write cost. Initial builds read stored run contexts and can take time on large histories. - Concurrent index builds avoid holding a write-blocking table lock for the whole build. The existing migration retry path removes invalid partial indexes before retrying. - The chat parser accepts only canonical lowercase UUID text. This preserves the prior text comparison, including rejection of uppercase and malformed values. - Staging has not been migrated or deployed. Local PostgreSQL and synthetic data do not reproduce hosted load or network latency. ## Model Used - OpenAI Codex, based on GPT-6. The exact serving model ID and context window were not exposed in this session. Used reasoning, repository tools, browser inspection, and local code execution. The adapted fixes retain their original contributor credits. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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c80d93e14e |
fix(observability): time execution configuration steps (#16236)
Record optional execution-configuration timings before provider dispatch, with success, failure, sampling, cleanup, and silent-unconfigured controls. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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6cb6ac3b8e |
fix(github): allow review publication to finish before tool timeout (#16275)
## Thinking Path > - Paperclip manages agent work and its published results. > - GitHub review bots publish task-scoped assessments through the tool gateway. > - A submission saves its assessment and publication intent before it waits for GitHub. > - The gateway's ten-second default can expire while those provider requests continue. > - GitHub can then show a completed review while the agent receives a timeout and blocks its task. > - This pull request gives GitHub bot tools the existing sixty-second maximum by default. > - The caller can receive the confirmed publication result without manual task repair for ordinary slower responses. ## Linked Issues or Issue Description **What happened?** A GitHub bot's `submit_review` call returned `504 tool_timeout`. Its saved assessment continued to publish a summary and completed check after the caller stopped waiting. The agent treated publication as unconfirmed and blocked the task. **Expected behavior** A valid GitHub response that takes longer than ten seconds should return its confirmed publication receipt within the gateway's supported deadline. **Steps to reproduce** 1. Configure a report-only GitHub review bot and admit a PR review request. 2. Delay the summary-comment PATCH response by eleven seconds. 3. Submit a complete assessment through a real run-scoped tool gateway. 4. Before this fix, the caller gets a timeout while the durable action publishes one summary and a neutral check. 5. With this fix, the caller gets `completed`, `processed`, and the assessment score. Retrying does not add another comment. **Paperclip version or commit** Reproduced from master at `2c17d3ca52a7840f280f1dd87975a2ad77de3b35`. Related changes: Refs #16259 and #16263. Those changes repaired connection recovery. This change addresses the subsequent submission deadline. ## What Changed - Use a sixty-second default for `paperclip_github_chat` tools in run execution and board tool tests. - Preserve explicit shorter deadlines and the existing maximum. - Add PostgreSQL-backed regressions through the real gateway for delayed publication, explicit deadlines, neutral checks, and duplicate prevention. - Document the deadline and the durable publication behavior. ## Verification - Red: the eleven-second publication regression failed with `ToolGatewayHttpError(504, tool_timeout)` after the summary and neutral check were published. - Green: the same regression passed after the repair. - GitHub review workflow suite: 122 tests passed. - `pnpm -r typecheck`: passed. - `pnpm build`: passed. - `pnpm test:run`: running; results will be recorded before handoff. - Live local verification is running against a dedicated test App on [the disposable test PR](https://github.com/paperclipai/paperclip-permissions-smoke-20260926-pap57-fee7428e/pull/9). A test-only preload delays one real GitHub PATCH response by eleven seconds. It is not part of this change. ## Risks GitHub bot calls can occupy their execution slot for up to sixty seconds by default. Calls that exceed that limit can still time out. Durable publication may continue after any caller timeout, so a timeout alone is not proof of a failed write. This change does not add automatic task reconciliation for arbitrarily slow or unavailable providers. No schema or credential changes are required. ## Model Used OpenAI Codex (GPT-6), with code inspection, editing, test execution, and browser verification. The exact deployment model ID and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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f8af817f8d |
fix(ui): make external agent pairing codes copyable (#16274)
## Thinking Path > - Paperclip manages AI agents and their work. > - External agents connect through the shared MCP agent gateway. > - Grok setup gives the operator a one-use code for the authorization page. > - The password field hides the code but does not provide a working copy action. > - The pending approval button names Dot before the agent preview loads. > - This pull request adds explicit code copying and a neutral approval label. > - The operator can review the fixed agent without sending credentials to chat. ## Linked Issues or Issue Description Refs: #16219, #15581, #15414. **What happened?** The Grok setup code is in a read-only password field. Ordinary browser copying does not copy that field. The shared authorization page says “Connect Dot with pairing code” before it knows the invited provider. These defects blocked a watched Grok desktop setup before approval. **Expected behavior** An operator can copy the one-use code with a visible control. The code stays hidden and outside the Bot prompt. The authorization page shows the registered client and the fixed company, agent, permissions, and authorizing person before approval. **Steps to reproduce** 1. Choose New agent, Invite an external agent, and Grok Bot. 2. Save the Bot identity and open Connect access. 3. Try to copy the masked code into the Bot's browser authorization page. 4. Inspect the pending approval action before a valid preview loads. **Paperclip version or commit** The fix starts from master commit |
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2c17d3ca52 |
fix(github): recover webhook verification in attention state (#16263)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - GitHub review bots require signed webhook delivery before activation. > - Cloud can deduplicate an old ping after a connection repair. > - A fresh event could verify active connections, but an attention-state connection discarded it before authentication. > - This pull request allows signed delivery verification while the connection needs attention. > - It discards ordinary work until the manager completes the existing reconnect and activation checks. ## Linked Issues or Issue Description Refs #16259. Related: #16138 addresses the separate classification of local authorization failures. **What happened?** Live verification of #16259 found that a GitHub App already marked as needing attention remained stuck waiting for a signed ping. The Cloud relay had already delivered that ping. New signed events were discarded by the attention-state ingress gate before they could verify delivery. **Expected behavior** A fresh valid event from the bound installation verifies delivery. It does not activate the connection, change repository access, or start work. The manager can then complete the normal reconnect flow. **Steps to reproduce** 1. Put an existing App connection into attention state with webhook verification cleared after repair. 2. Deliver a fresh signed comment event for its bound installation. 3. Continue setup. Before this fix, webhook verification remains missing and reconnect cannot proceed. ## What Changed - Use a content-free verification path for signed ordinary GitHub events while the connection needs attention. - Allow a fresh signed event from the same installation to verify webhook delivery. - Verify delivery even from disabled or unavailable repositories. Discard the event before content storage, resource reconciliation, or runtime creation. - Keep newly verified connections in the provider-setup step. Later installation events cannot activate them before reconnect. Preserve normal installation recovery for existing qualified connections. - Extend recovery regressions to cover attention state, foreign installations, invalid signatures, missing installation IDs, unchanged resources, no wakeups, and successful reconnect after verification. - Document the recovery behavior. ## Verification - The targeted regression reproduced the attention-state failure before the change. - All ten recovery cases pass after the change. The tests cover disabled and unavailable repositories, content-free verification, and installation events after verification. - Server typecheck passed. - All 260 GitHub integration tests passed after the review fixes. Final server typecheck also passed. - `pnpm -r typecheck` and `pnpm build` passed. - The full local suite is running. One unrelated workspace-runtime conflict-reference test failed and then passed on its isolated rerun. Final totals and CI/review outcomes will be updated before merge. - Live verification will use the existing advisory review bot after deployment. ## Risks - Attention-state ordinary events authenticate under the current credential lease without creating a durable content record. They return before resource reconciliation or runtime creation. - Verification is still bound to the current credential lease, runtime generation, valid signature, and installation ID. It does not activate the bot or replace normal setup checks. - Paused, revoked, archived, and unconfigured connections retain their existing ingress rules. No schema changes or permission expansion. ## Model Used OpenAI Codex (GPT-6), with code inspection, editing, test execution, and browser verification. The exact deployment model ID and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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c36281d639 |
fix(skills): repair missing branches and show grouped import progress (#16256)
## Thinking Path > - Paperclip lets people manage AI agents and their reusable skills. > - GitHub skill sources must keep their installed content usable during updates. > - A source can track a branch that no longer exists. > - The UI treats that GitHub error as a connection problem, so saving a valid account does not resolve it. > - Project workspaces also show the same repository several times, and long imports give little feedback. > - This pull request adds explicit branch repair, groups repository imports, and shows import progress. > - People can repair the actual problem and see when their import is working. ## Linked Issues or Issue Description Refs #16066 and #14713. This fixes the Sources experience introduced by those changes. Related adapter-source PRs #14340 and #14341 cover runtime mounting, not this source-management flow. No overlapping source-management fix was found. **What happened?** An installed source tracked `main` while its GitHub repository used `master`. GitHub returned HTTP 422. The UI showed a general read error and asked for a new connection after a valid account was saved. The project repository list repeated the same repository/ref for each project. Import had no spinner or explanation of queued work. **Expected behavior** Identify an unavailable branch and offer an explicit repair. Retain the selected connection and installed versions. Show one repository/ref row with its projects. Give immediate feedback and show the queued and active import states. **Steps to reproduce** 1. Install a source with an immutable commit and a saved tracked branch that does not exist. 2. Refresh it, or try to save a valid GitHub connection. 3. Add the same repository/ref to two legacy project workspaces and open Sources. 4. Import that repository and observe the row until installation completes. ## What Changed - Distinguish a missing GitHub revision from access denial and temporary read errors. - Validate both repository identity and the tracked revision when saving a connection. - Offer Use default branch on independent sources and in connection repair. Keep `HEAD` as the default-branch alias after refresh. Preserve skill IDs, versions and selections. - Keep active project refs under project configuration. Reject source-level changes that would alter their tracking. Recheck the ref under the source lock when project attachment races with branch repair. - Group matching repository/ref workspaces. Adopt eligible workspaces and skip pending workspaces. Keep remaining project links inside the existing source card. Allow remaining imports while another workspace is pending. - Show a spinner, busy state and queued/importing text. Keep the saved authorized account selected in connection repair. - Update shared contracts, feature/access maps, database notes and production-component Storybook journeys. ## Verification - Red/green: three local regressions failed on the original code: missing-ref classification, duplicate repository rows, and branch repair instead of another connection prompt. The changed UI/reader tests pass after the fixes. - Live local app with a real authorized GitHub credential: reproduced HTTP 422 for the unavailable branch; used the UI to restore default-branch tracking; confirmed the same connection, skill ID and single immutable version remained. - Live local grouped Paperclip import: one source, two project associations and 52 installed skills. Sources survived reload. No staging data was changed. - All 16 project repository Storybook browser journeys pass on the final head, including keyboard focus recovery after branch repair. These include branch repair, grouped imports, connection selection, recovery, removal and responsive layouts. - Repository typecheck, production build, Storybook build, token gates and 28 map/catalog tests passed. Final UI typecheck and build also passed after grouping remaining project links. - Linux qualification: all 94 focused source, project import, GitHub reader and UI tests pass with supported Node 24. No database tests were skipped. Both review findings failed before their fixes and pass after them. - The full local `pnpm test:run` attempt was stopped after macOS database suites exhausted the host shared-memory limit. The complete Linux CI matrix is the full-suite gate. The complete Linux CI matrix passes for head `f886e3ac073ec1c6f051fd6429496234f5143694`. - Greptile rates head `f886e3ac073ec1c6f051fd6429496234f5143694` 5/5. Both findings are fixed and all review threads are resolved. - Storybook: `skills-project-repository-skills-02-journeys--missing-branch` and `--duplicate-projects`. ## Risks - Default-branch repair changes the tracked branch only after an explicit user action. Existing execution version pins stay intact. - A selected connection now needs access to the tracked revision, not only repository metadata. - Grouping is by repository and ref. Project access and provenance remain separate and are checked by the existing services. - Legacy source errors contain safe text. The repair-action classifier maps known errors and treats other failures as retryable. No credentials or provider response bodies are returned. - No schema migration, workflow change, lockfile change or staging deployment. ## Model Used OpenAI Codex, GPT-6 family. The exact serving model identifier and context-window size are not exposed in this session. Tool-assisted implementation, code execution and browser verification. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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a8b652b085 |
fix(github): preserve review delivery through reconnect (#16259)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - GitHub review bots turn authorized repository events into agent tasks and publish the result on the pull request. > - Cloud Apps send callbacks through a relay, but the direct callback recovery worker reported that URL as broken. > - Reconnecting the same App then prevented a new authorized publication from updating its existing working comment. > - Report-only runs could also produce an action-required check when no complete assessment was available. > - This pull request preserves comment identity across reconnects, verifies fresh signed delivery after repair, and keeps report-only results neutral. > - Users can receive the review without changing repository access or making an advisory bot block their pull request. ## Linked Issues or Issue Description **What happened?** A review could be saved in Paperclip while GitHub kept showing “Working on this…”. A same-App reconnect changed the runtime generation and the existing response receipt then failed with “GitHub response binding changed”. Cloud callback recovery also compared the relay URL with a direct tenant URL. An incomplete or failed report-only run could produce an action-required check. **Expected behavior** A fresh authorized attempt updates the same App-owned comment after reconnect. Stale attempts and revoked people remain denied. Cloud relay delivery does not produce a direct-callback mismatch. Report-only checks remain neutral and explain incomplete work honestly. **Steps to reproduce** 1. Accept a GitHub request and publish its working comment. 2. Reconnect the same App before the agent publishes its result. 3. Submit the result and inspect the working comment and check. 4. Separately, let a report-only run end without an assessment and inspect its check conclusion. Related: #16138 addresses the separate classification of local authorization errors as provider credential failures. This change fixes the response binding and report-only paths themselves. ## What Changed - Bind durable response comments to the App and agent. Keep per-attempt runtime generation checks and provider comment ownership checks, including legacy receipts. - Exclude Cloud-managed Apps from the direct webhook recovery scan and its stale callback-mismatch warning. The Cloud inbox owns relay retries. - Let a fresh authenticated event from the bound installation verify webhook delivery after repair. Keep signature, runtime epoch, installation, and credential lease checks. - Keep report-only assessment and terminal-run checks neutral. Preserve incomplete/error text and gated-review behavior. - Add integration regressions for reconnect races, legacy comments, failed runs, Cloud recovery, and foreign or forged webhook traffic. Update connector documentation. - Correct the assigned-tool search guidance to name the actual input fields (`offset` and `schemaOffset`) and show valid arguments. The failed automatic review had an input-schema rejection before tool execution; this clarifies recovery without expanding tool access. ## Verification - `pnpm -r typecheck` passed. - GitHub policy and integration suite: 291 tests passed (`vitest run server/src/services/chat-github-review-policy.test.ts server/src/__tests__/chat-channels.integration.test.ts -t 'GitHub|github'`). - The report-only policy regression failed before the fix and passed after it. - `pnpm build` passed. - Assigned tool discovery: 24 tests passed. Its guidance now maps returned pagination offsets to the correct input fields and tells the model to omit unused optional fields. - Full `pnpm test:run` is running. It encountered a 15-second timeout in the unrelated authenticated Workspace calendar-write test. That test passed on one isolated rerun. - After the review-requested module extraction, server typecheck and both direct/Cloud recovery activity integration checks passed. - All 55 non-skipped CI checks passed for `32e690279d847e44a6946b6c7cfb110fb11aff79`. Greptile scored that commit 5/5 with no unresolved findings. Live staging publication verification follows deployment. ## Risks - A durable response can now survive a same-App reconnect. Fresh authorization, runtime generation checks for each publication attempt, App ownership, and the publication lease still fence writes. - Report-only failures intentionally become neutral. The check still reports the failure; it does not claim a complete assessment. - Cloud-managed callbacks rely on their existing durable relay inbox. The direct callback recovery worker remains unchanged for direct installations. - No schema migration or permission expansion. ## Model Used OpenAI Codex (GPT-6), with code inspection, editing, test execution, and browser verification. The exact deployment model ID and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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40ecacff4c |
fix(voice): accept authenticated Cloud callers (#16254)
## Thinking Path > - Paperclip manages agent work through company-scoped tasks. > - Speko voice connections bind a caller to that work. > - Private voice routes must recognize an authenticated human caller. > - Cloud sign-in uses a trusted Cloud actor, rather than a local session actor. > - The voice caller check rejected that existing authentication type. > - This pull request accepts authenticated Cloud callers and retains the current access checks. > - Cloud users can load call history and start private voice sessions. ## Linked Issues or Issue Description Refs #15727, #15728, #15729. **What happened?** A signed-in Cloud user sees “Sign in to start a private voice conversation” when the Speko connection loads call activity. The same check prevents the user from starting a private voice session. **Expected behavior** The trusted Cloud user identity should have the same voice caller access as a local authenticated session. The current company and user identity checks must still apply. **Steps to reproduce** 1. Sign in to a Cloud workspace with experimental chat connectors enabled. 2. Connect a Speko persona to an existing agent. 3. Open its call activity, or start a browser voice session. 4. Observe the sign-in rejection despite the authenticated workspace session. **Paperclip version or commit** Reproduced on the voice route in master at |
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b8ffeb973a |
feat(runner): add experimental Grok Bot agent participation (#16219)
## Thinking Path > - Paperclip manages AI agents that perform work for a company. > - The shared Runner owns task admission, authority, receipts and finalization. > - An existing Grok Bot needs to receive assignments and return results through that Runner. > - The Bot also needs governed access when it starts work from its own conversation. > - This PR adds agent-purpose MCP access and routine webhook dispatch. > - It reuses the external-agent Rust Runner and keeps Grok capabilities explicit. > - The provider stays experimental until the real-client managed journeys pass. ## Linked Issues or Issue Description **Agent or provider** Grok Bot, distinct from the Grok Build coding runtime in #13882. **Why this adapter is useful** Users can assign work to an existing Bot, receive progress, questions, documents and files in Paperclip, and let the Bot initiate work under its agent permissions. **How the agent is invoked** A webhook-only routine delivers bounded references. Dedicated named-agent OAuth and MCP provide inbound calls. Setup follows [Grok routines](https://cursor.com/help/grok-bot/routines) and [custom plugins](https://cursor.com/help/grok-bot/connect-plugins). The current desktop app needs its Bot-generated Webhook URL navigation link when routine-row clicks fail. The GitHub search found related Grok Build runtime work, but no existing Grok Bot agent provider. This extends the roadmap’s existing agent, Runner, governance and artifact foundations. ## What Changed - Add default-off Grok Bot participation through the shared real Rust external backend, preserving native provider identity guarantees and distinguishing session closure from remote termination. - Bind agent OAuth to company, agent, client, gateway and authorizer; recheck permissions and task-bound execution authority without manufacturing a native identity. - Persist routine configuration, dispatch intents, authenticated acknowledgement and recovery holds. Store URL/key together in encrypted secret storage, use guarded public egress, and never automatically replay ambiguous HTTP delivery. - Reuse native tools, durable waiting, completion assessment and review. Add task-bound file grants through existing artifact storage; suppress proactive echo dispatch and synchronous result wake loops. - Enforce the current native deliverable work-mode policy at file-ticket issuance and use. Add operator retries for confirmed rejected wakes, with retained receipts, stable retry intent and current-authority checks. Recovery locks bindings before routine rows. Thread Stop resolves the selected run and its agent. - Cancel queued and preparing Stop targets before assignment creation, restore saved setup after a failed request and successful retry, and publish the Grok provider descriptor schema. Advance the versioned Copilot source declaration for the shared schema change; its qualification remains pending. - Filter task summaries with the shared privacy policy, preserve feedback admission when wake delivery is blocked, reconcile settled delivery receipts without restoring work authority, and bind every Stop control to its displayed run. Recovery records distinguish dispatch uncertainty from a revoked session. - Add resumable guided setup, credential replacement, consent, management, observed work status and stop/recovery controls, plus an interactive Storybook journey using the production task thread, question form and report card. Grok’s own apps remain available; Paperclip workspace and third-party tools are deferred. ## Verification - Five focused protocol, authorization, person MCP and Runner files: 192 tests pass. The Grok assigned-work case executes the actual Rust Runner, saves a document, uploads/deduplicates a file and reaches ordinary finalization. - Proactive intake/deduplication and renewed-session recovery pass. These use scripted clients and synthetic storage; they are not real-provider acceptance. - Repository typecheck, production build, token gates, map checks and Storybook build/catalog checks pass. The local full-suite campaign was stopped after macOS shared-memory exhaustion repeatedly prevented embedded PostgreSQL startup. No local aggregate pass is claimed. The first clean-worker CI run identified avatar fixture/configuration, flag defaults, feature-card ordering and OpenAPI route-coverage gaps; all four focused regressions pass after correction. Those regressions pass. The latest clean-worker CI run also found a Copilot source-hash declaration mismatch after the shared descriptor update; the corrected declaration passes all 28 integrity tests. The next review corrections pass 144 rendered UI tests, 21 OpenAPI tests and 82 Runner contract/integrity/history tests. The latest database fixtures were blocked at startup by host shared-memory exhaustion; clean-worker CI must execute their new regressions. Full current-head CI now passes: 54 successful checks and four intentional skips. The database regression uses the PostgreSQL driver result shape; file-policy, rejected-feedback and lock-order cases pass on clean workers. Current-head Greptile is 5/5 with no unresolved findings. - Rendered setup steps and outbound-only verification were walked through in Storybook. Simulation cannot enable Done without an authenticated-reply state. - Actual client OAuth, continued access, reconnect and one routine wake with an exact chat acknowledgement were observed separately. This candidate’s live authenticated challenge, assigned/proactive workflows, Linux managed artifact, restart and cleanup are not yet qualified. The provider stays disabled by default. - The separate Cloud ingress change forwards only exact task-bound upload/download paths and preserves host identity and header stripping. - Current Cloud policy reserves Test for pre-merge app/harness experiments; Staging accepts only master-derived revisions. Real-client qualification needs a supported, authorized deployment target and remains outstanding. ## Risks One append-only migration adds routine/dispatch state and extends shared bindings and file tickets. The unshipped migrations were regenerated after upstream consumed their original numbers. Rolling back code retains the durable rows; revoke grants and inspect unknown remote activity before resuming dispatch. Grok cannot confirm remote termination, stream its complete transcript or report spending. Plugins are account-wide and do not isolate credentials between Bots. Real-client managed acceptance remains required before enabling the experimental provider. ## Model Used OpenAI Codex based on GPT-6, with reasoning, code execution and browser/native UI tools. The exact deployment model ID and context-window size are not exposed by this runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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450d93d49d |
fix(auth): deduplicate run history permission checks (#16242)
Share matching run-history permission checks within one list operation while preserving current authorization, redaction, and fresh checks on subsequent requests. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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5ea3f905cf |
fix: preserve workspace finalization during watchdog recovery (#16247)
Keep task completion separate from runtime and workspace settlement. Permit verified board file-only repair of successful legacy retained-source runs without authorizing replay. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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ba4fac585d |
feat(agents): show who created an agent in shared companies (#16055)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - A company in Paperclip can have more than one human member, and each member can create agents > - The app does not record which person created an agent > - When two or more people share a company, members cannot see who added an agent or who to ask about it > - This pull request records the creator of each agent and shows the creator on the agent Overview tab > - The benefit is clear ownership of agents in shared companies, with no change for single-user companies ## Linked Issues or Issue Description No public issue exists. This description follows `feature_request.yml`. **Subsystem affected** Agents: the agent data model, the agent create path on the server, and the agent Overview tab in the board UI. **Problem or motivation** Paperclip does not record which human user created an agent. When more than one human user works in a company, the agent page does not tell members who created the agent. **Proposed solution** Record the user ID of the creator when a human creates an agent. Show "Created by <name>" on the Identity card of the agent Overview tab. Show this row only when the company has two or more human members. Do not count the synthetic local Board principal as a human member. Do not show the local Board as a creator. **Alternatives considered** Count human users across the full instance. We did not do this. An instance-wide count tells a member of one company that other companies have users. The creator is always a member of the agent's company, so the company count is sufficient. **Roadmap alignment** `ROADMAP.md` has no item for agent ownership. This change is small and additive. ## What Changed - Add the nullable column `agents.created_by_user_id` (`packages/db/src/schema/agents.ts`, migration `0343_new_mentor.sql`). - Set the column in the single agent insert path (`server/src/modules/agent-lifecycle/adapters/records.ts`). The value comes from the authenticated user actor. The server ignores a creator value in the request body. Agents that agents or the system create keep `null`. - Backfill existing agents in the migration. The backfill uses the earliest `agent.created` or `agent.hire_created` activity row that a user actor wrote in the same company. - Add `createdByUserId` to the shared `Agent` type (`packages/shared/src/types/agent.ts`). - Add `ui/src/lib/agent-creator.ts`. It decides if the UI shows the creator row and it resolves the creator name. If the creator left the company, the row shows "Former member". - Add the "Created by" row to the Identity card in `ui/src/pages/AgentDetail.tsx`. If the company user directory request fails, the row shows "Could not load creator". The row does not disappear silently. - Add the Storybook story `Pages/Agent Detail → Shared Company Shows Creator`. - Document the column in `doc/SPEC-implementation.md` §7.2. ## Verification - `pnpm --filter @paperclipai/db typecheck` passes. This includes the migration numbering and migration safety checks. - `pnpm --filter @paperclipai/shared typecheck` passes. - `ui`: `tsc --noEmit` passes. - `server`: `vitest run src/modules/agent-lifecycle/__tests__/lifecycle.test.ts` passes (49/49). Two new tests: - The server records the creator from the actor and ignores a creator value in the request body. - The backfill takes the earliest user activity row. It skips agent actors and rows from other companies. - `server`: `vitest run src/__tests__/built-in-agents.test.ts` passes (40/40). A new test checks that a built-in agent enabled by a human records that human, and that automatic provisioning stays unattributed. The gated (pending-approval) provisioning test also asserts the creator. `src/__tests__/built-in-agent-routes.test.ts` also passes. - `ui`: `vitest run src/lib/agent-creator.test.ts src/pages/AgentOverview.test.tsx` passes (10/10). The tests cover these cases: the row shows with two or more humans, the row stays hidden with one human plus the Board, the UI never shows the Board as the creator, the row shows an error when the directory request fails, and the row stays hidden (no error) for agents with no creator or the Board as creator. The last case fails without the fix. - The current Storybook catalog uses source annotations and generated indexes. `node scripts/storybook-catalog.mjs --check` passes (264 story files, 2,514 stories). The merge keeps the authored catalog deletion from master. - `pnpm check:token-gates` is clean. - Screenshots from the Storybook story (fake data: two human members, Alice Admin and Bob Builder, plus the local Board). The red "Could not load public key" text is a Storybook artifact: the story has no fixture for the public key request. The existing `Dashboard` story shows the same text. **Two or more human members: the Identity card shows "Created by".**  **One human member plus the local Board: the row stays hidden.**  Full Overview tab: [overview-created-by.png](https://raw.githubusercontent.com/paperclipai/paperclip/9b62bd2ea6cf984ce6745f08cc45f44ddf00fb51/pr-16055/overview-created-by.png). The images are on the separate branch `pr-assets/agent-created-by`. They are not in this PR and do not go to `master`. - Manual check: open Storybook at `Pages/Agent Detail → Shared Company Shows Creator`. The Identity card shows "Created by Alice Admin". The `Dashboard` story has one human, so it does not show the row. - Final focused verification on `5a02350cf16050a3cf3cb3f8dc061fe61758c60d`: all 99 tests pass across the two UI suites, built-in-agent suite, and lifecycle suite. The backfill test applies the complete migration twice. The migration uses `ADD COLUMN IF NOT EXISTS` and preserves the company-scoped backfill. Migration numbering and token checks pass. - Full repository typecheck, build, and Storybook build pass. The generated creator story ID is present. A Chromium check renders the production agent page fixture and verifies the creator row and Alice Admin name. Map checks and their 21 tests pass. A fresh Apex review is 5/5 on the current head with no unresolved findings. All 54 successful CI checks pass on this head, with two intentional skips, including all general and serialized test shards, E2E, typecheck, and build. The workspaces-b job passed after rerunning a runner shutdown; no source change was needed. The separate, unsharded local `pnpm test:run` invocation has not completed; complete suite verification comes from CI. ## Risks - Migration: the migration adds one nullable column and runs one `UPDATE` on `agents` with a correlated subquery on `activity_log`. On an instance with a very large activity log, the backfill can take some time. The migration does not lock other tables and does not delete data. - Backfill accuracy: agents with no user-authored create activity row keep `null`. The UI then does not show a creator. This is the same as the current behavior. - Privacy: the row shows only names from the company user directory, and only to users who can already see that directory. - Low risk for single-user companies: the UI does not change for them. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - Provider: Anthropic, Claude Opus 5.5 (model ID `claude-opus-5-5`), run as a coding agent through Claude Code with tool use (shell, file edit, and test execution), standard context window. OpenAI GPT-6 (`gpt-6`) through Codex assisted conflict resolution, regression tests, and repository verification. This session does not expose an exact context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Amy (Opus) <noreply@anthropic.com> Co-authored-by: Paperclip <noreply@paperclip.ing> Co-authored-by: devinfoley <139239+devinfoley@users.noreply.github.com> |
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2238831ecd |
test(voice): qualify Speko task conversations and Storybook surfaces (#15729)
Third PR: depends on #15728 and #15727. The user has reviewed and authorized merging this experimental feature stack. ## Thinking Path > - Paperclip manages agent work through tasks and governed connections. > - Chat connections already bind external conversations to those tasks. > - Speko handles voice and telephony, while the selected Paperclip agent does the work. > - A call needs durable session authority, ordered follow-ups, and safe result delivery. > - This PR adds repeatable qualification for the Speko voice task integration. > - This PR depends on #15728, which depends on #15727. Speko stays experimental. ## Linked Issues or Issue Description **Problem or motivation** Phone and browser voice conversations cannot use the chat connection task lifecycle. A separate voice runtime is needed to preserve task authority, retries, and reply history. **Proposed solution** Add company-scoped voice sessions, signed callbacks, durable replies, inbound intake, and an agent-facing outbound-call tool. Reuse existing tasks, queues, secrets, and publications. **Roadmap alignment** This extends the experimental chat connector entry points under Agent Chat and Connected Apps. The project owner requested this feature. Refs #11418 for the original provider catalog proposal. This implementation uses the newer chat connection infrastructure rather than an MCP catalog-only integration. Refs #15721 for remote OpenCode startup. ## What Changed - Add a real Paperclip server/database E2E fixture that stubs only external Speko transport and the execution provider. - Add authenticated multi-user and cross-company qualification journeys. - Add Storybook interaction, accessibility, responsive, and visual-suite integration. - Add an E01–E16 runbook, component-to-story inventory, and current redacted qualification report. - Keep historical private call traces out of the PR. Provider proof tools are opt-in. ## Verification - All 21 standalone proof tests and browser client/server syntax checks pass. They cover signatures, redaction, cleanup retry, final audio saves, bounded report transport and late server write ordering. No live calls were placed. - All 27 focused UI/controller regressions, UI typecheck, token gates, and 28 map/catalog structural tests pass. The shared connection cache test covers pause/resume invalidation during the 30-second fresh period. - Storybook builds 157 Speko production-component stories. The complete prior 156-story set passed all 624 checks on UI source |
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a64969b288 |
fix(server): attribute legacy runs stopped by controller lease loss (#16084)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The heartbeat runner executes legacy agent runs. A controller lease watchdog keeps durable ownership of each legacy run. > - When the watchdog loses the lease, it aborts the adapter. The abort reason was a plain `Error`, and nothing recorded why the run stopped. > - Completion then saved the cancellation as source `unknown`. Sentry got an unexpected cancel that it could not tell apart from other unrecorded stops. > - We saw this on a sandboxed Grok run. The system cancelled it after about 22 minutes with `cancellationSource: unknown`. Workspace copy-back then failed. Every `cancelRun` path records a stop request, so an unrecorded stop this late points to the lease watchdog. > - This pull request records a lease loss as its own cancellation source, with a closed cause label. > - The benefit is that the next event shows whether the lease loss caused the stop, and which renewal failure caused it. That is the missing fact to fix the root cause. ## Linked Issues or Issue Description Refs #15790 Refs #15920 **What happened?** A legacy sandbox run was stopped by the system while it was working. The run record and the Sentry diagnostics show `cancellationSource: unknown`, with no initiator. The controller lease watchdog aborts the adapter with a plain `Error("Legacy controller lease lost")`. Completion does not read the abort reason, so it records the stop as `unknown`. **Expected behavior** When the host stops its own adapter because it lost the controller lease, the run records that cause. Diagnostics name the cause with a closed label. A stop that a user or the control plane requested earlier keeps its recorded source. **Steps to reproduce** 1. Start a legacy run that has a controller lease. 2. Make lease renewal fail: the renewal query errors, the update matches no row, or the lease deadline passes. 3. Let the adapter return its cancelled result. 4. Read `resultJson.cancellation` on the run. Before this change, `source` is `unknown`. **Agent adapter(s) involved** Not adapter-specific (core bug). We saw it with `grok_local` in a sandbox. **Additional context** This change adds diagnostics. It does not prevent the lease loss. #15920 retries a transient copy-back failure. It does not help here, because the stopped sandbox rejects every retry. ## What Changed - `legacy-controller-lease.ts`: The watchdog aborts with a new `LegacyControllerLeaseLostError`. The error carries a closed cause: `renewal_rejected`, `renewal_deadline`, or `renewal_error`. - `run-cancellation.ts`: Add the `controller_lease` cancellation source. Add `controllerLeaseLossCancellation()` and `readControllerLeaseLossCause()`. The reader accepts only the server-written reason text. - `heartbeat/run-completion.ts`: When the outcome is `cancelled` and the abort reason is a lease loss, record a `controller_lease` cancellation (`expected: false`). This covers both an adapter that returns a cancelled result (`completeRun`) and one that throws after the abort, for example through `signal.throwIfAborted()` (`failRun`). A stop request recorded earlier still takes precedence. - `run-failure-diagnostics.ts`: Add `controllerLeaseLossCause` to the execution diagnostics. Only the closed label goes to Sentry, never the reason text. - `heartbeat/run-state.ts`: preserve `controller_lease` in the bounded SQL projection when saved results exceed 64 KB. A database regression verifies the default run-detail read. - `canContinueCancelledRun` stays unchanged. It does not accept `controller_lease`, so a lease loss does not authorize automatic continuation. - `doc/run-log-events.md`: Document the new source and cause labels. - Tests: unit tests for the cause on each watchdog path, completion tests that record the source when the adapter returns and when it throws the abort reason (both fail without the change), tests that a recorded stop request takes precedence, and a test that the Sentry report contains the closed label and not the reason text. ## Verification - `cd server && npx vitest run src/services/run-cancellation.test.ts src/services/legacy-controller-lease.test.ts src/services/__tests__/run-failure-report.test.ts src/services/heartbeat/run-completion.test.ts`: 238 passed, including the embedded Postgres suites. - I reverted only `run-completion.ts` and ran the new completion test. It failed with `source: "unknown"`. With the change, it records `controller_lease`. - I removed only the `failRun` attribution and ran the new thrown-error test. It failed without the `controller_lease` record, and passes with it. - Final full repository `pnpm -r typecheck` and `pnpm build` pass. - Final local regression verification: all 247 tests pass across run-state, cancellation, watchdog, failure reporting, and completion suites. The large-result test fails before the SQL allowlist change. All latest-head CI checks pass (54 successes and two intentional skips). Fresh Apex is 5/5 on `708856c568d07d7b446a4a4af2edc6d9eec7d155` with no unresolved findings. ## Risks - Low risk. The change adds a new source value to server-owned JSON. Old rows keep their values. The readers accept the new value, and no UI code switches on this field. - A lease-loss cancel stays `expected: false`, so it is still reported as unexpected, as before. Now it has a more specific source. - The Sentry payload gets one new closed label (`controllerLeaseLossCause`). It does not include reason text or IDs. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - Anthropic Claude Opus 5.5 (`claude-opus-5-5`) in Claude Code, with tool use (shell, file edits, test runs). OpenAI GPT-6 (`gpt-6`) through Codex added the large-result regression and SQL projection fix, with shell, file-edit, and test tools. The exact context-window size is not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: devinfoley <139239+devinfoley@users.noreply.github.com> Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> Co-authored-by: Paperclip <noreply@paperclip.ing> |
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473c80d13f |
Automatically import and update project repository skills (#16066)
Automatically import skills from new GitHub project repositories and update enabled sources in the background. Preserve project-derived access, saved selections, immutable execution versions and explicit pins; add legacy adoption, refresh and connection repair in Sources. Include durable scheduling and bounded work credits, production Storybook journeys, real GitHub-to-routine acceptance receipts and final-head CI/security/Greptile qualification. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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de335b42d4 |
Expose signed routine wake deadlines during idle sleep checks
Expose signed routine wake deadlines during idle sleep checks Report the earliest eligible routine deadline to an authenticated host scheduler, while preserving local execution, owned sleep leases and conservative blocking for unsupported work. Verified with focused tests, typecheck, build, all required CI checks and Apex 5/5. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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7eea9d8214 |
fix(github): use bot names in review summaries (#16212)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - A GitHub bot can send a pull request to an agent and publish its review. > - Each bot has its own GitHub App identity, but every summary currently starts with "Paperclip Review". > - A generic heading makes it harder to identify reviewers when several bots review the same pull request. > - This pull request uses the bot display name in review summary headings. > - Users can identify each reviewer while required checks keep their existing name. ## Linked Issues or Issue Description **What existing behavior does this improve?** The heading of a GitHub bot's published pull request review summary. **Current behavior** Every summary uses "Paperclip Review", regardless of the bot's name. The check also uses "Paperclip Review" and must keep that name for existing branch rules. **Proposed behavior** Complete and incomplete review summary headings use the GitHub bot display name. The heading falls back to the bot login, then the assigned agent name, when old connections have no display name. Separate GitHub Apps keep independent checks with the same name. **Reason and benefit** Readers can identify each bot's review. A regression test confirms that publishing a review does not update a check owned by another App or endpoint. **Breaking changes** The summary heading changes. Consumers that parse the old heading must accept bot names. No API, prompt configuration, database schema, or check name changes are included. No duplicate PR was found in the GitHub bot title search. ROADMAP.md does not contain a duplicate of this change. ## What Changed - Use the bot display name in complete and incomplete review headings. - Escape Markdown in names and fall back to the bot login or agent name. - Verify the heading through the publication workflow and keep check updates scoped to the App and endpoint. - Document bot-named summaries and independent checks. Update both access maps. ## Verification - Focused policy, heading, and existing UI tests: 67 passed. - Database-backed regression cases: 2 passed, including bot-name publication and independent checks. - Map checks, token gates, and git diff --check passed. - Typecheck and build passed on the final rebased branch. The final focused run passed 44 tests; the two database-backed regression cases also passed in a separate run. All final-head CI checks passed, including full test suites, build, typecheck, E2E, and security scans. Greptile reviewed the final commit at 5/5 with no actionable findings. No review threads remain unresolved. ## Risks - Consumers that parse the old summary heading must accept bot names. - The GitHub check remains Paperclip Review. Multiple-bot check isolation was tested with provider fixtures; a live two-bot GitHub test was not run for this change. ## Model Used OpenAI GPT-6 through Codex. The exact backend model ID and context window are not exposed in this session. Used reasoning, repository tools, and code execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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433d94ee0b |
refactor(maps): generate indexes from local story and feature metadata (#16214)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Feature recipes and Storybook help contributors find behavior, examples, and verification steps. > - Independent feature changes currently update shared catalogs, indexes, and review hashes. > - Those shared files cause merge conflicts and repeated bookkeeping during parallel work. > - This pull request stores metadata in each feature recipe and story, then generates the combined views. > - Contributors can merge independent work without editing a common index. Git and PR evidence retain change and review history. ## Linked Issues or Issue Description **What existing behavior does this improve?** Maintaining the product, agent-access, and Storybook maps while multiple agents change different features. **Current behavior** A story or recipe change can update `catalog.json`, `INDEX.md`, review hashes, verification tables, and tracked generated navigation. Two unrelated changes then conflict in the same files. **Proposed behavior** Each story declares capability links and classification in `parameters.paperclip`. Each feature recipe declares its navigation and optional verification guidance. Startup, build, and UI typechecking discover these sources and generate ignored indexes and Storybook pages. **Reason and benefit** A routine change edits its own source files. Aggregate metadata is rebuilt from the merged checkout. There is no sidecar registry, shared review journal, or hash acknowledgment to maintain. **Breaking changes** The tracked Storybook catalog and index paths are retired. Consumers use `ui/storybook/generated/` or `maps/generated/` after generation. Contributor instructions and the existing feature-gap browser suite use the new paths. Story and overview IDs remain stable. ## What Changed - Move the existing annotations into 262 story files. Preserve classifications, capability associations, exports, and explicit IDs. - Discover all 35 feature recipes. Store section/order beside each recipe and move durable verification routes out of the shared table. - Remove tracked catalogs, inventories, overview pages, and inline preview ordering. Keep authored preview behavior in `preview-base.tsx`. - Generate the Storybook guide, feature/access Markdown indexes, gap report, page-reference inventory, and preview wrapper automatically. - Update the map contracts and maintenance skills to use Git history and revision-specific PR/CI evidence. - Add schema, identity, regeneration, and actual Git merge tests. Run these through the existing UI Vitest suite. Add focused browser navigation checks. This is one coordinated migration. Most of the 367 changed files contain only moved metadata or deleted generated content. Review the generator scripts, map contracts, Storybook configuration, and tests first. No product API or authorization behavior changes. ## Verification Passed: - `node scripts/check-maps.mjs`: 35 paired areas and 175 capabilities. - `node scripts/storybook-catalog.mjs --check`: 262 suites and 2,485 authored stories after incorporating current master. - `node --test scripts/check-maps.test.mjs scripts/storybook-catalog.test.mjs scripts/storybook-feature-index.test.mjs`: 28 tests, including independent branches merged in both orders with identical generated output and no tracked changes. - `pnpm --filter @paperclipai/ui exec vitest run storybook/map-tooling.test.ts`: the CI entrypoint runs those map tests. - `pnpm check:token-gates`. - `pnpm -r typecheck` and `pnpm build` before the final master rebase. - `pnpm build-storybook`: all 2,517 original story/docs URLs retained. Current master contributes exactly four additional recovery stories. - Focused Playwright navigation checks: search and open a feature without examples; expand verification guidance and check source links; retain capability order and follow a related Foundations suite. The final clean Storybook build passed after deleting every ignored map output. Post-rebase UI typechecking and both browser tests passed. The working tree stays clean after generation. The concurrent-cleanup regression fails with `ENOENT` without the fix and passes with it. All GitHub CI gates passed on `00fc7ec18e`, which also received Greptile 5/5 with no unresolved findings. The final merge commit `1c3c5143a6` incorporates master and resolves only the two modify/delete conflicts by retaining removal of the aggregate index and catalog. Master’s new workspace feature and access guidance is preserved. Map validation, catalog generation, overview generation, all 28 map tests, and diff checks pass after conflict resolution. The maintainer explicitly requested merging without another Greptile review. CI has not been rerun to completion on this merge commit. The local repository-wide `pnpm test:run` was stopped before completion after the earlier CI matrix passed; it is not reported as a local pass. No screenshot baselines or production acceptance are claimed. To repeat the browser check against an owned Storybook server: ```sh PAPERCLIP_GAP_STORYBOOK_URL=http://127.0.0.1:6136 pnpm exec playwright test --config tests/storybook-visual/feature-gap-stories.config.ts map-navigation.spec.ts ``` ## Risks - Existing branches need a one-time rebase to move their catalog changes into local annotations. The PR incorporates the recovery changes from current master. - Changing the same story or capability can still produce a meaningful conflict. This removes the shared aggregate bottleneck. - The generator uses Storybook's existing CSF parser. Literal-only annotations and parser regression tests protect the current contract. - Generated Markdown is available after running the generator; the published Storybook provides a browsable guide. - Shared source changes still require review. Removing hashes removes mechanical acknowledgments; it does not establish runtime parity. ## Model Used OpenAI Codex, based on GPT-6, with repository inspection, code execution, and browser-test tools. The exact deployment model ID and context window were not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green on the previously reviewed head `00fc7ec18e`; final conflict-resolution checks are documented above - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups on `00fc7ec18e`; another review was waived by the maintainer - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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c7f4b74111 |
fix: isolate fresh task sources from restricted project workspaces (#16095)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Each task must have an isolated workspace that its agent can read. > - Older project checkouts can contain worktrees for restricted tasks. > - The source access check correctly rejects these shared checkouts. > - A fresh task then fails even when its agent can clone the project remote. > - This pull request gives fresh default tasks a separate clone of the same remote. > - The task can start while the restricted task files remain protected. ## Linked Issues or Issue Description **What happened?** Fresh tasks fail with `Task workspace access is no longer available` when their default project checkout contains a restricted task worktree. The caller has access to the new task and its remote repository. The shared local Git source is unsafe to copy. **Expected behavior** Use a separate clone of the same authorized remote for a fresh default task. Keep source access checks and responsible-user Git credentials in force. **Steps to reproduce** 1. Put a restricted task worktree inside a project checkout. 2. Assign a new default task to an agent that cannot read the restricted task. 3. Start the new task. The current source check fails before workspace creation. 4. With this fix, the task uses a separate remote source. The restricted files are absent. Later runs reuse the same owned source. Related work: Refs #15749, Refs #15528. This change keeps their source retention and workspace ownership checks. ## What Changed - Add a remote source path scoped to the company and task. - Clone through the run’s Git connection after the shared source fails its access check. - Reject reused workspaces, explicit selections, pinned branches, local sources, credential-bearing URLs, and symlink paths. - Check source access again before publishing the workspace. - Resolve later runs from the verified recorded source. Ignore leftover clones that the saved workspace does not own. - Record provenance for new implicit Git defaults. Read the current task binding before fallback. Preserve explicit, inherited and ambiguous legacy checkout choices. - Keep the effective task strategy during startup validation of matching implicit defaults. Preserve the existing explicit-selection write check. - Add regression coverage and document the fallback. ## Verification - Merged master `c8efdbfba43` and resolved both rounds of catalog/index conflicts. All upstream suites, classifications, source references and story IDs are preserved. Both fix branches combine cleanly in either merge order, with no catalog fingerprint drift. - Passed locally: 313 focused source-isolation, preparation, task-creation, binding and trust tests before the final startup fix. The final fix passes all 100 source-trust, task-binding and environment-selection tests. Earlier workspace-resolution and persisted-source suites also passed. - Real-Git regressions cover all three review findings. Reconstruction ignores an unrecorded clone and preserves unpublished commits/files. Explicit and parent-inherited checkout IDs without typed selections retain their denial and branch tips without cloning or acquiring an environment. A protected-project heartbeat completes and resumes using the task’s Git strategy with read access. Explicit selection still requires writes, and a mismatched default is rejected. - Passed: the complete Storybook catalog check with no drift errors, feature and agent map structure checks, and all 17 catalog/index script tests. The generated index counts match the merged catalog. The current upstream verification-route inventory remains unchanged. The catalog contains all 262 authored suites and 2,481 story IDs. - Passed: full workspace typecheck and build after the final guard changes, on latest head `79d2adadcb6d3d7a04b9943a91bdb8b0b6abea6d`. - Latest head `79d2adadcb6d3d7a04b9943a91bdb8b0b6abea6d`: complete CI passed (54 successful checks, two intentional skips), including the full general/serialized suites and all eight browser shards. Fresh Greptile Apex review is 5/5 on this same commit, with no unresolved findings or recommendations. The full local test command was attempted earlier without a complete aggregate result; the complete suite result is from CI. - Manual check: configure a shared project checkout with a restricted task worktree. Admit a fresh default task using the authorized remote. Confirm separate Git storage and no restricted local branch or file. Reuse, close and reopen the task workspace. Confirm that explicit, literal branch and low-trust selections retain the denied source. ## Risks - A clean remote clone excludes unpublished local work. The fallback applies only to fresh default tasks and rejects existing workspace or branch selections. - A private remote can fail to clone when the responsible user lacks Git credentials. The run then reports the failure; access checks are not bypassed. - Older untyped checkout bindings cannot prove default provenance. They keep the source denial instead of silently dropping unpublished work. - New implicit Git defaults use the existing workspace-intent contract. The source directory uses existing instance storage. No schema migration is required. ## Model Used OpenAI GPT-6, model ID `gpt-6`, through Codex. Used reasoning, repository inspection, code editing, terminal tools, and test execution. The API session does not expose an exact context window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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db65a0863e |
Deliver durable resource lifecycle events to plugins without polling (#16203)
## Thinking Path > - Paperclip manages AI agents and their work. > - Plugins keep external resources aligned with Paperclip projects and agents. > - The durable resource journal stores changes, but its plugin interface requires polling. > - Project deletion has no journal entry, so consumers must scan for missing projects. > - This PR delivers committed journal events through a native plugin callback and records deletion. > - Plugins can recover unfinished work without periodic change scans. ## Linked Issues or Issue Description Related: #15343 introduced the durable inbox. #15631 added required agent lifecycle participation. This change keeps both contracts and adds automatic delivery for the resource inbox. **What happened?** Plugins must schedule reads of the durable inbox. A deleted project has no durable deletion event. Consumers must scan saved bindings to detect its removal. **Expected behavior** Core should deliver committed resource events and replay unfinished work. Empty queues should have no polling timer. Project removal should leave a durable event. **Steps to reproduce** 1. Install a plugin that consumes project lifecycle events. 2. Create or update a project. The plugin must call `listLifecycle` to discover it. 3. Delete the project. The journal has no deletion entry. ## What Changed - Add `resourceLifecycle` to the manifest and `onResourceLifecycle` to the SDK. Require `events.subscribe` and a configured, enabled company scope. - Reuse transaction-aware work signals and the delivery coordinator. Wake after commit, on startup and plugin activation, and after configuration changes. - Acknowledge only a matching successful result. Retry unfinished or interrupted work. Retain deferred events without an idle retry timer. - Wake again after successful worker configuration application, and retain failed scans through idle drain (both Apex findings fixed). - Keep ordering per resource and deliver past failed or deferred resources. Keep the manual inbox methods for existing consumers. - Record project deletion in the removal transaction. Extend the journal constraint with a generated migration. ## Verification - Apex follow-up: 129 focused worker, delivery, coordinator, and application tests passed; server typecheck passed. Regression coverage verifies configuration-application races and failed scans across idle drain. - Focused lifecycle, transaction coordinator, manifest, and SDK dispatch suites: 105 tests passed, including single-connection saves, redacted failure diagnostics, wakeups retained during idle drain, and per-event retry deadlines. - Complete SDK suite plus delivery database tests: 128 tests passed. - Shared, database, and SDK typechecks passed. Direct server `tsc --noEmit` passed against rebuilt SDK declarations. - Full local `pnpm test:run` finished with 19,491 passed, 148 skipped, and 6 failed tests across 5 files (plus two suite setup errors). This run overlapped branch updates and is not final-head evidence: failures included missing Cargo, local Git default-branch assumptions, and stale in-process lifecycle modules. Final Apex-fix commit `75d028788` passed all CI gates, including the full test shards, and received Apex 5/5 with no unresolved comments. - `pnpm -r typecheck` and `pnpm build` were attempted. Both stopped because Cargo is unavailable locally. CI supplies the Rust toolchain. - Local installation used the repository's documented lockfile fallback because master has dependencies missing from its lockfile. No dependency changes are included here. ## Risks - Delivery is at least once. Plugins must re-read current state and make external effects idempotent. - Signals are process-local, like the other delivery queues. Startup recovers committed rows. Independent database writers or multiple active server processes require an explicit ownership and wake protocol. - Apply migration `0340_open_warlock.sql` before running code that records project deletion. Earlier deletions cannot be reconstructed. - Automatic delivery selects plugins with company configuration rows. `deferred` waits for a later startup, configuration change, or other work notification. - This does not replace required agent lifecycle participation or establish that external mounts are unused. ## Model Used OpenAI Codex (GPT-6), with tool-assisted code editing, code inspection, and test execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [ ] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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5a6d0d08a7 |
fix: record verified workspace file recovery from tasks (#16104)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Recovery must preserve files and show the next operator action. > - A stopped run can leave a file repair hold after its recovery action is resolved. > - The task notice shows that hold but has no form to record verified file recovery. > - A chat connection can also replace the file repair instruction with a chat retry instruction. > - This pull request adds a file recovery form and preserves the file repair instruction. > - The form records evidence for the original run and keeps the current task status. ## Linked Issues or Issue Description **What happened?** A retained workspace file hold can block a task after its recovery action is resolved. The task page offers no file recovery form. A chat binding can hide the required file repair instruction. **Expected behavior** An authorized board member can record verified recovery of the original files. The server checks the original stop proof. The task keeps its current status and does not start another run. Chat instructions must not replace file repair instructions. **Steps to reproduce** 1. Create a stopped legacy run with a retained workspace recovery marker and a resolved recovery action. 2. Open its task page, including a task with a chat connection. 3. Observe that the file hold has no supported form to record verified recovery. Refs: #15857, #15824, #16095. Those PRs address shutdown export, native finalization and workspace source isolation. This PR uses the existing file repair API. ## What Changed - Add a board-only file recovery form with evidence and an explicit file verification confirmation. - Preserve the current task status when recording file recovery. - Project whether the original recovery marker supports file recording. - Keep file repair instructions when a task has a chat binding. - Add UI, route and Storybook examples for success, denial and chat-connected file holds. - Document the recovery flow and update the affected Storybook catalog entries. ## Verification - Merged master `c8efdbfba43` and resolved both rounds of catalog/index conflicts. Upstream review notes and classifications are preserved, together with all four retained-file recovery examples and their stable story IDs. Both fix branches also combine without merge conflicts or catalog fingerprint drift. - Passed locally after conflict resolution: 47 tests covering the file recovery UI, execution blocker notice and retained workspace repair route. The earlier ownership-route pass also covered 196 tests. - Passed: UI token gates, the complete Storybook catalog check with no drift errors, feature and agent map structure checks, and all 17 catalog/index script tests. Verification inventory counts match all 262 authored suites and 2,485 story IDs. The upstream production verification obligations remain intact. - Passed: full workspace typecheck, build and Storybook build on latest head `10ac22b35d0a4fe469cf620914845c509046da48`. The built index retains all four file-recovery story IDs. - Latest head `10ac22b35d0a4fe469cf620914845c509046da48` has 54 successful checks and two intentionally skipped Storybook checks. Apex is 5/5 on that exact commit, with no unresolved findings. The full general/serialized suites and all eight browser shards passed in CI. Local tests use the focused suites above. Storybook browser interactions have not been executed locally. - Manual check: open a task with a retained file hold. Verify that evidence and confirmation are required. Record verified file recovery. Confirm that its status stays unchanged and no run starts. Repeat without board runtime access and with an unverified stop receipt. ## Risks - The form records an operator attestation. It does not recover files itself or prove external action outcomes. - A stale source or missing stop proof must remain rejected by the existing server route. - No database migration or automatic task retry is added. ## Model Used OpenAI GPT-6 (`gpt-6`), used through Codex with reasoning, repository tools, code editing and test execution. The exact context window size is not exposed by this environment. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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ccdc6754b2 |
fix: retain background preparation traces from unsampled requests (#16205)
Start preparation phase root traces independently of request sampling and link each phase to its trigger. Preserve operator root sampling, concurrent child context, and silent unconfigured behavior. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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da9af67415 |
Persist agent-owned instance secrets through lifecycle results (#16191)
## Thinking Path > - Paperclip coordinates agents and controls when they can run. > - Lifecycle plugins prepare and remove resources for each agent. > - Those resources can require private connection credentials. > - The current SDK can resolve configured secrets but cannot save these credentials securely. > - Ordinary company secrets can be bound to agents and do not provide the required server-only boundary. > - This change saves agent-owned instance secrets through the existing local lifecycle result and native secret service. > - The tenant can retain runtime credentials through restarts without a separate encryption system or remote API. ## Linked Issues or Issue Description **Subsystem affected** Agent lifecycle, plugin contract, and native secret storage. **Problem or motivation** Lifecycle plugins need to save private runtime connection details for the owning agent. Worker memory loses these details on restart. Plugin state and company secrets do not provide a private runtime-only boundary. **Proposed solution** Add optional instance-secret changes to lifecycle results. Save them through the existing secret service and local encrypted provider before accepting the result. Require company, agent, plugin, phase, operation, revision, and current unexpired attempt ownership. Supply saved values through the existing local preparation/resume request. **Alternatives considered** A separate encrypted store duplicates the native secret system. Generic plugin company-secret writes proposed by #5007 do not supply agent ownership or a server-only secret scope. This change does not add that general write API. **Roadmap alignment** Extends the existing lifecycle contract from #15631. It does not add a resource provider or select an execution backend. ## What Changed - Add an instance scope to native secrets with mandatory agent/plugin ownership, a company-qualified agent foreign key, and key uniqueness per owner. Existing company and user scopes retain their constraints. - Reuse native creation, rotation, deletion, secret versions, access audit, and the local encrypted provider. Keep values out of company catalogs, normal bindings, agent access, and public agent records. - Accept local secret patches only after locking and checking the current lifecycle operation and required plugin selection. Storage failure or a stale reply cannot complete setup. Expired or replaced attempt owners cannot overwrite a successor's credentials. - Keep vault-import conflicts company-scoped. Protect instance-owned account-home paths during failed device-login cleanup with a private, fail-closed scan. - Skip decryption on stop and cleanup so a lost key cannot block removal. Cascade secret records when their agent or plugin is deleted. - Log fixed provider diagnostics without raw errors that can contain credentials. Document the local contract, runtime resolver, and access-map exclusions. Retain the five latest migration snapshots through the normal generator pruning. ## Verification - 239 focused tests passed across agent-instance-secrets, lifecycle, secrets-service, secrets-routes, plugin-secrets-handler, and agent-device-login-routes. Used disposable PostgreSQL 18 clusters through the existing test constructor seam because the bundled binary cannot start on this macOS host. The temporary harness is outside git. - Regression tests reproduced the vault-import conflict and missed cleanup claimant before the fixes; both pass after the fixes. - New coverage includes encrypted native versions, rotation, restart recovery, company/agent/plugin isolation, ordinary-read and binding denial, stale replies, storage failure, safe logging, cleanup without the master key, and same-name secret isolation, native account-home mutation guards, lease takeover/expiry, and live agent/plugin deletion cascades. - Direct server TypeScript check, DB/shared typechecks, migration numbering/safety checks, module boundaries, and git diff check passed. - Full workspace typecheck and build were attempted; both stop at the missing local cargo toolchain. The full test command was started and stopped after failures in unchanged native-runtime/workspace suites plus bundled-PostgreSQL skips; it did not complete. CI must verify the full toolchain paths. - Current head `c0f8bfd12477ad509252ecd40e168a6c84dbeb36`: all 55 CI checks passed, including the previously canceled e2e shard. Greptile Apex reviewed this exact head at 5/5 with no unresolved threads. GitHub reports the branch mergeable and clean. - No live provider probe, production data access, or deployment. Reviewed the diff for credentials, private references, and run artifacts. ## Risks Apply migration 0339_luxuriant_iron_monger.sql before deploying tenant code. It adds nullable ownership columns, a partial unique index, foreign keys, and a stricter scope constraint. Existing rows remain valid. Keep the schema on application rollback. Preserve the existing secrets master key through deployments and backup restoration. The lifecycle request/result now has a sensitive, server-only field. Plugins must never log it or return it to an agent or browser. Values stay in the tenant database through the existing encryption provider. Trusted runtime consumers must apply normal execution admission before resolving them. Older hosts omit instanceSecrets; plugins that require durable storage must reject those hosts. ## Model Used OpenAI GPT-6 via Codex, with reasoning, repository inspection, code editing, and local test execution. The exact serving model identifier and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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e67db42dc9 |
docs: define heartbeat execution design principles (#16190)
## Thinking Path > - Paperclip coordinates AI agents and their work. > - Heartbeat controls when that work starts, who owns execution, and how it settles. > - The extracted modules need shared architectural guidance as they evolve. > - Rules should protect those boundaries without freezing the current implementation. > - This PR adds scoped heartbeat principles for contributors and reviewers. > - The rule helps future changes preserve execution authority and recoverable work. ## Linked Issues or Issue Description **Issue type** Missing documentation. **Where is the issue?** The heartbeat service has a module map but no scoped architectural rule under `rules/`. **What's wrong?** Changes span admission, execution, completion, and recovery. Reviewers need shared principles for authority, ownership, and settlement across these boundaries. **Suggested fix** Add a concise heartbeat rule, route contributors to it from `AGENTS.md`, and register the same scope for Greptile. Keep implementation details in the code and existing developer documentation. Related: #16172 established scoped repository rules. #15984 completed the latest heartbeat extraction. Searches found no duplicate heartbeat-guidelines PR. ## What Changed - Add `rules/heartbeat-execution-boundaries.mdc` with a folder guide, a concise map of existing module responsibilities, and six design principles. - Keep `heartbeat.ts` focused on coordination: extend an existing owner or extract cohesive modules when new behavior would substantially grow it, with tests and explicit contracts. - Cover current execution authority, explicit ownership, distinct completion obligations, recovery intent, durable state, and visible uncertainty. - Register matching paths in `.greptile/files.json` and link the rule from `AGENTS.md` and `doc/DEVELOPING.md`. - Include behavioral review criteria and flag substantial coordinator growth or mixed responsibilities while allowing justified cohesion and ordering exceptions. ## Verification - Parsed the rule YAML and Greptile JSON. Confirmed that the rule globs exactly match the Greptile scope. - Checked 14 positive and negative scope cases with Node's `path.matchesGlob`, including nested heartbeat modules, sibling services, regression tests, and unrelated paths. - Verified local links and heading anchors, including the existing heartbeat module map, and confirmed all 20 named modules exist. Reviewed their responsibility descriptions against the current code and developer documentation. - `git diff origin/master --check` passed after rebasing onto current master. - Reviewed the principles against the current heartbeat code and tests. The diff changes four documentation and review-configuration files. - Application typecheck, runtime tests, and build were not run locally. This worktree has no installed dependencies. CI and review status are tracked below. - CI passed on `a17f5a2cc82b7bb7e4629d4a2d9e3a766e27c5c0`: 55 successful checks, two skipped, no failures or pending checks. This includes typecheck, build, server/runner tests, and browser tests. - Greptile reviewed the same commit at 5/5 with no findings or unresolved review threads. ## Risks The rule can influence later implementation and review decisions. It applies to changed heartbeat behavior and permits justified contract changes with tests. The scoped globs exclude unrelated subsystems. This PR does not change application behavior. Hosted loading of the new rule has not been demonstrated by the local configuration checks. ## Model Used OpenAI GPT-6 Astra (`gpt-6-astra`) via Codex, with repository inspection, file editing, and command execution. The context-window size was not exposed to this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass (scoped rule/configuration checks described above) - [x] I have added or updated tests where applicable (documentation/configuration validation; no runtime changes) - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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e3029c632b |
feat: trace controller preparation before agent dispatch (#16178)
Trace eleven controller preparation operations with the existing hashed run correlation and preserve errors without exporting exception text. Verify asynchronous child-span parenting with a real OpenTelemetry SDK and context manager. Full exact-head CI and E2E passed after one documented fixture-startup retry; Greptile Apex 5/5. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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0b0e53029f |
fix: recover saved workspace results automatically (#15824)
## Thinking Path - Paperclip preserves accepted agent results before workspace copyback and result commitment. - A replaced controller can leave a physical copyback owner receipt behind. A lost database lock or expired lease cannot prove that its tar/Git children stopped. - Infrastructure recovery should belong to the runtime and deployment harness; task users should not investigate processes or attest shutdown. - New receipts record the exact deployment. The harness independently verifies that deployment fully stopped and signs a short-lived proof bound to the stack, run, owner and deployment. - The existing guarded reconciler then finishes the same accepted result without a new agent turn. Legacy receipts retain the documented administrator API after independent platform verification. ## Linked Issues or Issue Description **What happened?** An accepted native result can remain at `workspace_finalizing` with an abandoned physical copyback owner. Repeated recovery sweeps could replace specific instructions with advice to start new agent work. The first version of this PR exposed a shutdown-evidence form in the task; that asks end users to resolve infrastructure details. **Expected behavior** Automatically verify and recover the exact stopped deployment, preserve the original accepted result and existing approval/monitor waits, and show only a quiet task status. Unknown or live workers must remain fenced. Older receipts without platform identity need independently verified operator assistance through the administrator API. **Steps to reproduce** 1. Persist an accepted native result and a copyback receipt from a prior controller. 2. Replace that deployment before workspace finalization commits. 3. Let the normal finalization reconciler revisit the saved result. 4. With a platform-bound receipt and a fully stopped deployment, recovery should finish automatically. With missing, live, unverifiable or changed ownership, it must not write files or create another provider turn. Related public work: #14402 introduced copyback ownership; #9687 handles dead-run finalize barriers; #15795 handles terminal stale-run cleanup. This change addresses an accepted result whose physical copyback owner prevents commitment. ## What Changed - Record Railway project, environment, service and deployment identity on new physical copyback owners. - Request read-only platform verification from the managed cloud harness. Require an Ed25519 stop receipt with a disjoint purpose, configured signing key, exact stack/run/owner/deployment binding and valid expiry. - Keep live, unknown, malformed, unavailable and legacy owners fenced. Compare the whole prior receipt during ownership takeover, under the existing dedicated advisory lock. - Persist platform proof and audit automatic takeover. Resume normal finalization of the same saved result, preserving task ownership, approved boundaries, monitors and pending confirmations. - Remove process metadata, shutdown evidence, confirmation checkboxes and infrastructure-repair forms from task views. Suppress the duplicate technical owner-recovery card. Show “Restoring saved work…” only from server-confirmed recovery or queued operator recovery; platform identity alone shows the operator-assistance fallback. Remove the status when recovery resolves. - Share current-task, current-running-execution, accepted-result, authoritative-reviewer and newer-execution checks between automatic and operator recovery. Validate after the provider lookup, atomically with the owner claim, and again before file publication; closed or superseded tasks cannot start copyback. - Keep the separately authorized exact-owner API for operator recovery of legacy receipts, with active-lock, live-controller, stale-result and newer-execution rejection. Generic dismissal cannot bypass the copyback fence. - Replace obsolete form stories with production-backed automatic, queued, legacy, completed and mobile examples; retain stable suite IDs. Update the operator runbook and scoped Storybook catalog. ## Verification - Red/green: new platform-proof tests failed before implementation; the database takeover regression failed against the original ownership guard; reduced-UI assertions failed against the original form. All pass after the changes. - Passed: 59 physical-owner/finalization database tests using isolated PostgreSQL, including real reconciler commitment from all three saved-result phases through both automatic and operator recovery. They preserve result identity, exact saved file bytes, pending approval and overdue monitor waits, and create no new run or wake request. Unknown evidence and changed ownership remain fenced. - Passed: 162 focused proof, cloud identity, recovery route, recovery-card and reduced-UI tests. - Passed: full workspace typecheck and build, final server/UI typechecks, token gates, and Storybook build. - Browser inspection: desktop task composition shows only the quiet status; completed example removes it and retains the approval-wait message. Mobile shows the existing bottom navigation with no horizontal overflow. These are fixture UI observations, not live provider acceptance. - A companion harness change implements the actual provider check, signed receipts, server-token authentication and bounded/coalesced provider reads. Its full typecheck and test suite passed: 3,240 passed, 92 skipped, zero failures. This application alone cannot enable platform verification. - The updated full application `pnpm test:run` was stopped after repeated local embedded-Postgres startup failures; it is not claimed green. The same affected recovery suites pass against isolated PostgreSQL. CI passed on final head `9ad5c3529e`: 54 successful checks, two intentional skips, and successful legacy Snyk status. Greptile is 5/5 with no unresolved findings. - Global Storybook catalog validation is green: 225 files, 2,224 stories. Its 17 catalog/index tests pass. Master was merged and the inherited index metadata was reconciled after source review. - Review correction red/green: two UI and two database assertions reproduced misleading progress / missing server recovery state; all pass after server-confirmed state was added. All 153 focused server tests and 68 UI tests pass on the final recovery code, including repeated-sweep idempotence. Full workspace typecheck/build, token gates and Storybook build also pass. - Safety regression red/green: stale-task copyback and publication tests failed against the previous guard. The final suite covers changes during proof lookup, closed/cancelled tasks, replaced execution/checkout, newer and queued legacy runs, reassignment and rejected/unbound results, plus the real reconciler selecting closed or superseded tasks. Files remain untouched and no workspace operation starts. - No staging mutations, deployment, live provider probes or live production recovery were performed. The three historical receipts lack deployment identity and still require independent operator proof. ## Risks Automatic takeover requires the companion harness release and configured runtime-identity keys. Deploying only this application leaves unavailable evidence fenced. Legacy receipts are not retrospectively assigned a deployment identity. An authorized operator can still make an incorrect attestation through the fallback API; its administrator gate and exact-owner safeguards remain. Provider history that is missing or deeper than the bounded lookup defers automatic recovery. Copyback can still fail under its existing retained-workspace policy. No migration, telemetry change or cloud provider credential delivery is required. The companion harness PR also has passing CI and a 5/5 review; neither branch is deployed. ## Model Used OpenAI Codex, GPT-6, with repository inspection, browser verification, tool use and code execution. The exact serving model ID and context-window size were not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run the relevant tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> Co-authored-by: Paperclip <paperclip@paperclip.ing> Co-authored-by: Devin Foley <devin@paperclip.ing> |
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833769ab55 |
perf(chat): schedule Telegram maintenance from commits and deadlines (#16094)
Replace periodic Telegram discovery and maintenance scans with bounded startup recovery, connection-specific commit notifications, and durable action deadlines. Preserve ownership, inactive subscription parking, retry and cleanup recovery, and atomic credential binding updates. Verified full typecheck/build, 30 focused scheduler tests, 12 database-backed recovery cases, all current-head CI checks, and Greptile 5/5 with no unresolved threads. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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a0651c96f8 |
Add database-free process liveness probes (#16101)
Expose process liveness without database or credential queries while preserving hostname and runtime identity guards. Deep health and sleep/wake readiness checks retain their existing behavior. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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be380ba155 |
fix(ui): hide agent-created tasks by default (#16157)
Hide agent-created, system-created, and chat-channel tasks from independent collections by default. Preserve task hierarchy context and existing inbox participation. Add a saved opt-in checkbox without helper text. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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aded4197e5 |
fix: make multiplayer task toasts personal (#16153)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - A company can have several human users and shared agents. > - Live task events currently produce toasts for any user who can read the task. > - This makes unrelated work interrupt other users. > - This pull request checks each user's task participation before it permits a toast. > - Users receive relevant task notifications while company views continue to refresh. ## Linked Issues or Issue Description **What happened?** Company task activity and agent failures produce noisy toasts for users who have no involvement in the task. **Expected behavior** A task qualifies when the viewer created it, commented on it, is its assigned user, deliberately acted on it under the Mine rules, or has an explicit user mention in its description or a non-deleted comment. Viewing, agent ownership, responsible-user attribution, and parent participation alone do not qualify. **Steps to reproduce** 1. Sign in as two users in the same company. 2. Have the second user create and update a task that does not involve the first user. 3. Observe a task toast in the first user's company view before this fix. The duplicate PR search found no existing change for personal task-toast eligibility. ## What Changed - Extract the existing Mine participation predicate without changing Mine behavior. - Compute task eligibility from stored tasks, comments, and run associations after WebSocket access checks. Use an exact indexed comment-mention lookup with `LIMIT 1`. - Add optional `toastEligible` metadata to each viewer's event copy. Keep it off the shared event bus. - Require eligibility for live task activity and task-linked run errors. Suppress generic agent errors. - Continue cache updates for quiet events. Refetch visible comments when authenticated events omit hydration details. Ignore stale socket callbacks after account or company changes. - Document toast semantics and add feature-map and agent-access-map coverage. - Add persisted-data, socket, UI, and authenticated browser regression coverage. ## Verification - Final commit: `1dc4f9402c5883744738cfe236ad00fa0bb5ca4c`. - All 55 current-head checks passed. Two Storybook checks were skipped because this change does not affect that coverage. - Greptile approved this exact commit with 5/5. The security scan passed. Both review threads are resolved. - Local `pnpm build`, `pnpm -r typecheck`, `pnpm check:token-gates`, and `node scripts/check-maps.mjs` passed. - The focused socket/UI suite passed 123 tests. The persisted eligibility suite passed 9 tests, including long history, exact viewer matching, and regex escaping. The existing Mine service suite previously passed 140 tests. - The named browser case `task toasts follow personal involvement in multiplayer` passed against the final commit in an isolated authenticated instance. It used two real sessions, real WebSocket delivery, and persisted tasks, edits, comments, and mentions. It verified quiet unrelated activity, viewing alone, first and historical mentions, own-action suppression, visible-task suppression, and live cache refresh. - A prior-head server shard passed its single rerun after a fixture-cleanup deadlock. The final-head CI run passed without a rerun. - The broad local run remained in progress when CI completed the full test suite. Local focused checks and CI provide the completed test evidence. ## Risks - This intentionally reduces live notifications. A new client stays quiet against an older server that omits eligibility. - Eligibility queries add work to live event delivery. A lookup failure suppresses the toast and still delivers the authorized event. - Deleted mentions cease to qualify unless another participation rule applies. Historical comment authorship retains the existing Mine behavior. - No database migration or notification-settings change is required. ## Model Used OpenAI Codex with GPT-6 assisted with implementation, tests, documentation, and PR preparation. It used repository tools, shell commands, and browser automation. The runtime did not expose an exact backend revision or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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2ad36f4ff2 |
Fix skill source removal with a keep-or-delete choice (#16150)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work.
> - GitHub sources import skills and keep their updates together.
> - Disconnect only disabled a source and kept its read-only imports.
> - A disabled source could not be removed or imported again.
> - Removing a source needs an explicit decision about its imported
skills.
> - This pull request removes the source after the user keeps editable
copies or deletes the imports.
> - Existing disabled sources use the same removal flow.
## Linked Issues or Issue Description
Refs #15731, #14713.
**What happened?**
Disconnect left the repository on Sources. Its Disconnect action was
then disabled. The saved repository still blocked a new import.
**Expected behavior**
Remove the repository from Sources. Require a choice to keep editable
copies or delete its imports. Allow removal of sources that are already
disconnected.
**Steps to reproduce**
1. Import a repository in Skills → Sources.
2. Choose Disconnect source.
3. Observe the disconnected row and disabled removal action.
4. Try to import the repository again.
**Paperclip version or commit**
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df06df2306 |
fix(slack): allow direct messages without at-mentions (#16151)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Slack connections let people start and continue agent tasks. > - The Require at-mention setting currently applies to channels and direct messages. > - A person who sends a direct message has already selected the agent. > - This pull request exempts direct messages from mention checks, including queued work. > - People can talk normally in DMs while channel messages keep the configured mention rule. ## Linked Issues or Issue Description Refs #15612, which introduced the Require at-mention setting. Searches found no duplicate PR for the DM exemption. **What happened?** With Require at-mention enabled, a plain Slack DM does not start or continue agent work. New Slack connections enable the setting by default. **Expected behavior** Direct messages do not need an at-mention. Top-level DM replies remain top-level. Channel messages and channel thread replies still follow the saved mention setting. **Steps to reproduce** 1. Enable Allow direct messages and Require at-mention on a Slack connection. 2. Send a plain DM from an authorized sender. 3. Confirm the agent responds without an at-mention. Send a plain follow-up and confirm it also works. 4. Confirm unmentioned channel messages remain filtered when Require at-mention is enabled. 5. Disable Allow direct messages and confirm new DMs remain blocked. **Paperclip version or commit** Source baseline: `eb06c9fedd`. **Deployment mode** Built from source. Automated tests use disposable local Postgres and provider fixtures. This change has not been deployed or retested in live Slack. ## What Changed - Exempt DMs at inbound admission, task mutation, work authorization, and heartbeat queue claim. - Keep channel mention checks and all existing sender, endpoint, and destination checks. - Update regressions for new connections, follow-ups, deferred delivery, and coalesced queued messages. - Clarify the Slack settings copy, connection documentation, and verification maps. - Refresh the affected Storybook review references after source inspection. ## Verification - Passed 55 Slack and durable scheduler tests with Vitest on the current rebased commit, including admission through the extracted inbound module. - Passed `pnpm -r typecheck` and `pnpm build` on the rebased PR commit. - Passed token gates and map checks. - Passed Storybook catalog validation after rebase: 223 files and 2,210 stories. - Full local `pnpm test:run` was stopped before completion after three failures in the unchanged tool-access suite. All 418 tests in that suite passed in a standalone rerun. The focused regressions passed; full GitHub CI remains the merge gate. - Greptile reviewed commit `b0293fa6571403c5e01c30bb7b5fcc5e91b88c97`: 5/5, with no findings or unresolved review threads. All 55 GitHub checks passed on this commit; two optional Storybook jobs were skipped. - No live Slack messages were sent during implementation verification. ## Risks Existing Slack connections now accept authorized plain DMs even when Require at-mention is enabled. Allow direct messages and sender authorization still apply. Queued DM work follows the same exemption. Channel behavior and DM reply routing are unchanged. No schema or migration change is required. ## Model Used OpenAI GPT-6, running as Codex, with reasoning, tool use, and code execution. The runtime does not expose a more specific model ID or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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fc3b15537b |
fix(runner): match call_api to existing agent REST permissions (#16040)
Route native call_api through existing agent REST permissions. Preserve admitted credentials across restarts, protect sensitive replies and private snapshots, and compare saved completion with provider history through the same redaction projection. Add permission, privacy and recovery regressions and update the access map and run-log guide. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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eb06c9fedd |
refactor(server): split chat channel workflows into provider and shared modules (#16080)
Move provider operations into channel folders and shared chat work into named interaction, setup, admission, delivery and publication workflows. Consolidate reviewed PRs #16085, #16089, #16096 and #16105. Preserve upstream execution-default and recovery behavior. The main service is 7,917 lines. All 55 current-head CI checks pass, with two optional Storybook skips. Greptile is 5/5 with no findings. All 1,294 current chat integration cases, repository-wide typecheck and build pass locally. Broad local tool-route timing/socket failures are recorded in the PR. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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9bd820e687 |
feat(storybook): mirror the complete feature-map index (#16052)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The feature map describes its user-facing capabilities and verification recipes. > - Storybook provides isolated UI examples for those capabilities. > - The previous organization showed only features with primary story suites. > - This pull request derives the complete Storybook index from the upstream map. > - Readers can find the same features in both places and see related examples or explicit gaps. ## Linked Issues or Issue Description Refs #16046 and #16049. **What existing behavior does this improve?** Storybook navigation and the downstream feature catalog. **Current behavior** The sidebar has 28 primary feature homes. The feature map lists 35. The main guide groups suites alphabetically by area slug. Related examples can live under a different feature. **Proposed behavior** Use the feature map's eight sections and 35 features in the same order. Give each feature an Overview page with all its capabilities, related example links, and missing-example messages. Keep shared foundations outside the product index. Preserve all existing stories and URLs. **Reason and benefit** Readers can move between the feature map and Storybook without learning a second index. A feature without cataloged examples remains visible. **Breaking changes** None to existing story IDs or product behavior. Storybook start and build now reject stale generated feature pages and ordering. Run the catalog generator after upstream changes, inspect the output, and review affected source fingerprints. ## What Changed - Generate 35 feature Overview stories and capability data from the upstream map. Generate the inline sidebar order required by Storybook. - Replace the main guide with the full ordered feature index and search. Link all related suites from feature pages, even across primary homes. - Preserve all 223 authored files, 2,210 story IDs, and the existing docs ID. Keep status, implementation, and fixture classifications visible. - Put the generated Markdown catalog in feature-map order. Keep generated guides outside example counts. - Update maintenance and review skills, documentation, and generator tests. Keep the feature map independent of Storybook. ## Verification - Passed: 16 catalog and generator tests; map checks; token gates; both skill validators. - Passed: `pnpm -r typecheck`, `pnpm build`, and the Storybook build. - Built-index comparison preserved all 2,211 previous entries and added only 35 feature overviews. Feature order matches the map. - Browser: inspected the complete index and sidebar, searched for Goals, opened its overview, and followed a related suite under Projects. The original suite renders. - Passed: all 8,170 UI tests in 728 files. Browser checks also covered empty search, capability-ID search, missing-example pages, the original editable-text bookmark, the CLI sidebar label, and searching/opening shared foundations. - The broad local `pnpm test:run` was stopped after a failure in the unchanged GitHub chat test `authorizes description edits as the editor, never inheriting the original author's access`. That exact test passed alone without code or expectation changes. A complete local repository suite pass is not established. - Original revision CI passed after one runner retry. The merged revision `5ca01c70716f23974680a8019ddc613035d11bc4` passed fresh CI. Local UI typecheck, catalog checks, 16 generator tests, map checks and token gates pass. - Greptile: 5/5 on final commit `5ca01c70716f23974680a8019ddc613035d11bc4`, with all findings resolved. - Master merge: inspected source drift in 61 catalog entries and regenerated INDEX, preserving upstream notes. Marked the sidebar suite that mounts IssueDetail unreviewed for the new activity query; recorded limits for composer and channel-default changes. No stories removed. - Final Storybook build passed. Browser filename searches for `new-task-composer` and `forms-editors` return the expected feature and shared example. - No visual-baseline or full production acceptance claim. The deeper authored scenario groups remain intact. ## Risks - The parser depends on the feature-map Markdown contract. It rejects unknown index rows, omitted feature recipes, and unexpected generated files. - A suite can reference several capabilities. A link proves catalog association, not complete behavior coverage or production parity. - Storybook treats `/` as a folder separator. Sidebar labels use a comma for that character; the guide and page headings retain the upstream name. - No database, API, authorization, or production component changes. ## Model Used OpenAI Codex, GPT-6 family, with reasoning, code execution, and browser inspection. The exact runtime model ID and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com> |
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d67e3507b2 |
feat(runner): qualify Codex platform packages and cache hosted builds (#16028)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Native execution needs a compatible installed daemon and provider dependency. > - The Codex-default work found missing platform packages and clean-install startup failures. > - Release builds also repeat dependency compilation and run preparation serially. > - This prerequisite packages four daemon targets and verifies installed native startup. > - It also caches hosted Cargo dependencies and overlaps JavaScript preparation with compilation. > - Agent creation defaults and experimental gates stay at the current master behavior. ## Linked Issues or Issue Description Refs #15683. Refs #15555. Refs #15422. Refs #15926. Refs #15932. Extract runtime and installation support from #15683. This prerequisite has 65 changed files. Creation, onboarding, imports, UI runner selection and graduation remain in the dependent PR. Feature/access maps and the Storybook source catalog stay synchronized. Existing agents keep their execution choices. ## What Changed - Correct the existing runner test fixtures. Reserve owned credential quorum listeners through the existing bounded fixture helper. Keep foreign listeners intact, run actual credential staging once, and preserve its rejection and unchanged-auth assertions. Reuse the durable-resume outer-limit correction. Wait for actual warm-completion and held-authorization callback entry under the existing recovery deadline and surface early request errors. Preserve every semantic assertion. - Retain bounded installation failure diagnostics through the existing qualification receipt upload. Keep the original error, 10-minute deadline and all success checks. - Keep startup ownership until credential preparation and registration drain. Reject duplicate and post-close startup/resume work. Observe shutdown during normal and adopted authentication readiness. Preserve the primary failure and retain private state when cleanup is unconfirmed. - Package Linux x64/ARM64 and macOS Apple Silicon/Intel daemons. Verify target headers, source identities, manifests, and hashes before assembly and installation. - Reuse the existing release producer/consumer workflows. Cache Cargo dependencies by target, OS, compiler, lockfile, and contract inputs. Rebuild workspace binaries. Permit trusted cache writes only for canonical exact-source master pushes. - Overlap JavaScript preparation with native compilation. Join both commands and failure/cancellation cleanup before artifact verification. - Preserve shell positional arguments in the shared SSH runner and apply environment assignments correctly. Reject environment option keys. Six before/after controls and two real SSH subprocess paths pass with zero provider calls; this fix lands before both Codex and Claude defaults. - Admit verified suspended SSH backups during cold controller continuation, using the same full-scope, integrity and lifecycle checks as sandbox targets. Two positive SSH cases fail before; all 14 positive/negative matrix cases pass afterward. Active ownership and corrupt/malformed/nonempty state remain rejected. - Record measured sandbox platform facts through the existing explicit environment probe. Bind facts to the company, effective provider configuration, immutable OCI image and actual captured image binding. Check the returned cleanup receipt. Reject client-authored proof and stale or named boot identities. Creation and discovery allocate nothing. Preserve connection-only behavior. - Resolve the actual remote Codex target and preserve same-host development overrides. Preserve runtime artifact verification. Use actual protocol/model compatibility rather than a numerical CLI version fence. - Resolve the installed Codex login dependency on 64-bit Linux and Mac independently of the daemon libc baseline. Preserve account homes and safe errors. - Fix actual clean-install TOML table comparison. Preserve strict semantic checks, comments, private writes, and malformed-input rejection. Preserve primary startup failures and bounded cleanup. - Document GNU libc 2.39+ and stock Ubuntu sandbox prerequisites. Qualify ARM startup with a scoped distribution profile and unchanged global restrictions. Preserve Windows and Alpine deferral. - Preserve selected and saved native Codex reasoning effort in the existing UI builder, while excluding it from other providers. This small shared correction prevents import edits higher in the stack from dropping effort. - Reuse existing installed-package checks and assertions. Paperclip tarballs contain no Codex native payloads. Official npm dependencies supply the consumer's Codex binaries. All Docker and native builds stay remote. ## Verification Candidate: `271d434c170e74bdedde65d0b13059a55419c943`. It includes current master `e168512f7bdbb6af6ea01954c6d7ed80b91e903e` and preserves prior candidates through ordinary commits. Current [full CI](https://github.com/paperclipai/paperclip/actions/runs/38346601686) is successful on attempt 2. GitHub reports 54 successful checks and four conditional skips, including required verify and browser aggregates, workspace typecheck/tests/build, Linux DB controls, both runner shards and [isolated native compilation](https://github.com/paperclipai/paperclip/actions/runs/38346601609). Fresh current-head Greptile is 5/5 with all four threads resolved. The passing build's clean Grok/Codex report records CI merge source `7a82a37438e6e448abc7cc5caa60dc2519a97be0`, 18 installed packages, omitted Codex payloads, official host-only npm dependencies and zero provider calls. Pi setup and its no-prompt lease verification also pass. The first attempt's single 60-second Node archive download timeout remains retained; its DNS/TLS/download cause remains unknown. One unchanged-source retry was requested through the normal Build-job dialog with debug logging disabled. GitHub's attempt 2 graph reports the other CI jobs as well; no second retry or source/deadline relaxation was made. The [final exact-source package campaign](https://github.com/paperclipai/paperclip/actions/runs/38347027535) is successful on literal `271d434c170e74bdedde65d0b13059a55419c943`. It passes all four native producers, public Linux package assembly and clean installed consumers on Apple Silicon, Intel Mac and Linux ARM64. The nine qualification-mode skips are intentional; full CI above covers their ordinary gates. Native builds and Docker assembly ran remotely. The predecessor [`dae808` package campaign](https://github.com/paperclipai/paperclip/actions/runs/38342104102) remains literal historical evidence. Only tests and the dated record differ from that source; runtime, package and workflow code is unchanged. The reused credential fixture correction passes all 42 canonical Node 24 controls with synthetic data and independent matching-source review, and the current hosted runner shard passes. Production credential behavior is unchanged. **Merge hold:** current-source CI, fresh 5/5 review and exact-source package qualification pass. Actual code-owner approval and normal protected merge remain pending. No slice has merged or deployed. GitHub CLI authentication needs refresh; the normal signed-in embedded GitHub UI provided this status without credential workarounds. - The master merge preserves both Storybook source-review appendices and the guarded test-home cleanup. All six existing cleanup controls pass without skips. Master's isolated-home helper/test/setup are byte-identical. The two existing whitespace lines in master's unrelated privacy test remain outside this PR's diff. - Canonical Node 24 passes all 24 existing public-install helper tests. Three narrow added cases prove bounded/redacted failure metadata, symlink exclusions, original exception identity, failed diagnostic writes and no false failure on success. The Mac installer now uses `--timing`; at most two 16 KiB tails and 32 structured entries per tail enter the existing receipt upload. Raw argv, URLs, environment, error text and stacks are omitted. A failed receipt explicitly remains FAILED/unqualified/runtime-not-attempted. The 600,000 ms install deadline and every real package/hash/payload/lock/lifecycle/runtime oracle are unchanged. - Canonical Node 24 reproduces the durable-resume outer timeout under controlled fake latency. Only its outer test limit changes to 15 seconds; internal 500 ms/5 second deadlines and usage/effect assertions remain. Controlled warm-recovery and before-bootstrap authorization scheduling delays reproduce their callback polling failures, while the explicit entry signals pass. Early recovery errors surface unchanged. Independent review is clear. Historical mock binaries support the fixture controls; fresh full hosted CI remains decisive. The original hosted callback failure cause is inconclusive. - The composed runner/surfaces/server/E2E TypeScript checks pass. Map checks pass 35 areas/171 capability IDs. Token gates pass. The existing Storybook catalog passes 223 files/2,210 stories; story IDs and classifications remain intact. The current master had 25 inherited stale fingerprints from three changed map recipes. Only those guarded fingerprints and a source-only review note change; all 92 non-map story/component/fixture inputs remain unchanged. Existing classifications are retained. This proves source structure, not visual or live acceptance. - The 65-file contribution audit has no code file crossing from below 1,000 lines to above the limit. Earlier comment cleanup preserves executable emissions, parsed workflows and action pins. Independent cleanup/catalog and three-file reporting reviews are clear. No new workflow, suite, grader or local native/Docker build was added. **Prior `dae808` gate evidence:** fresh Greptile is 5/5 with four resolved threads, isolated native compilation and the browser aggregate pass. Its first runner shard passes the previous two corrections but fails a different held-authorization cell at the implicit one-second polling deadline. It records 1,672 passes/one failure/three skips. This candidate applies the verified entry-signal correction without changing production deadlines or any semantic assertions. Its original hosted cause remains inconclusive until fresh CI. **Previous-source evidence, kept literal:** the [exact `16a532` package campaign](https://github.com/paperclipai/paperclip/actions/runs/38338806076) passes all four native producers, public Linux package assembly, Apple Silicon, Intel Mac and Linux ARM64 installed consumers. Its fresh review is 5/5 with all four threads resolved. Full CI records 52 successful checks, four conditional skips and the two fixture failures corrected here. This is not a green full-CI candidate or proof for the new source. `64c074fb8da1b31f8d6042c4fef48dc4164e759b` passed [full CI](https://github.com/paperclipai/paperclip/actions/runs/38332726938), 54 checks/four conditional skips, [isolated native compilation](https://github.com/paperclipai/paperclip/actions/runs/38332726787/job/115085895328), and fresh Greptile 5/5/all four resolved threads. The hosted transport suite passed 246 tests and startup trust passed 22, closing that source's local fake-binary limitation. These are historical after reconciliation. The [previous exact-source package campaign](https://github.com/paperclipai/paperclip/actions/runs/38332921463) built all four platform daemons and passed public Linux package assembly plus Apple Silicon and Linux ARM64 installed consumers. **Intel Mac failed:** its initial scripts-disabled npm install timed out before lifecycle/runtime assertions. The underlying download/resolution/host cause is unknown because the old helper deleted the npm logs. This is the concrete baseline for the diagnostic change. The failed campaign remains failed; no all-platform signoff or automatic retry is claimed. The earlier `a200495` [four-target campaign](https://github.com/paperclipai/paperclip/actions/runs/38283695248) and [scoped ARM qualification](https://github.com/paperclipai/paperclip/actions/runs/38291535914) remain component evidence. Cargo restores were cold misses; no warm-cache speedup is claimed. Paperclip tarballs contain no Codex payloads. Official npm dependencies supply Codex on the user's platform. Current-source full workspace typecheck/tests/build, Linux DB controls, static/Rust/native tests, all browser shards and exact-source package consumers must pass. New-agent defaults and final managed onboarding belong to #15683. Actual private Cloud composition, warm/cold signup, task/follow-up and rollback compatibility remain later release gates. Source audits found that ordinary managed onboarding does not run the saved platform probe and Cloud distributes named snapshots without a verified final boot-image binding. These dependent release blockers remain open; prequalified E2E fixtures do not close them. Master adds task-workspace migrations; the final image/migrator and previous-image checks must include them. ARM paid task/follow-up and ordinary OS APT installation are not proven. ## Risks - Multi-target packages require source and header agreement. Missing or mismatched artifacts fail explicitly. Existing execution choices remain unchanged. - Linux requires GNU libc 2.39+ and compatible sandbox prerequisites. The scoped hosted ARM preparation does not qualify arbitrary containers or kernels. Windows, 32-bit ARM, and Alpine remain deferred. - Only dependency crates are cached. Preview jobs cannot write trusted caches. Concurrent command cleanup must preserve the primary failure. - Native-free Paperclip packaging retains official Codex npm dependencies. No Codex payload bundling, schema migration, automatic agent migration, or production deployment is included. ## Model Used OpenAI Codex, GPT-6 family, with reasoning, repository tools, code execution, and parallel agents. The exact serving model snapshot and context-window size are not exposed. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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4a641d0980 |
fix(ui): default human task replies to the latest assigning agent (#15594)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Tasks let agents ask a person for input. > - The reply composer needs a useful default recipient. > - A recent comment does not identify the agent that assigned the task. > - The old fallback can select the person who is writing the reply. > - This change uses the latest agent assignment and keeps manual choices. ## Linked Issues or Issue Description **What happened?** When an agent assigns a task to a person, the reply composer can select that person or a different commenter. A data refresh can also replace a manual selection. **Expected behavior** For a task assigned to the current person, select the latest agent that assigned it to them. If no such assignment exists, use the latest other commenter. If neither exists, leave the recipient empty. Keep explicit choices during refreshes. **Steps to reproduce** 1. Have agent Alpha assign a task to a person. 2. Assign it to agent Beta, then have Beta assign it to the same person. 3. Open the task as that person. 4. Check that the reply composer selects Beta. 5. Select another recipient. Refresh task data. Check that the selection stays. Related work: #15091 shares task composer controls. This change fixes recipient defaults. ## What Changed - Read real assignment changes from REST and native runner task activity, in time order. - Record human assignee fields in native create and reassign activity. - Ignore unchanged assignment fields and assignments to other people. - Use the assigning agent before comment hints for human-owned tasks. - Connect the suggestion to current and classic task composers and pipeline replies. - Keep manual selections when suggestions change. - Add regression tests and document the fallback. - Use tasks with no assignee in the attachment receipt tests. This keeps the tests on the comment route. Dismiss announcements through the real UI. - Record human and agent assignees in REST creation receipts. Include child creation in the assignment history resolver. ## Verification - Focused tests cover assignment order, creation, other recipients, unchanged fields, fallback, and manual selections. - Browser fixture uses the real composer and assignment resolver. It selects Beta and keeps a manual human selection after history refresh. - Passed: 223 focused tests across four suites. - Passed: `pnpm --filter @paperclipai/ui typecheck`. - Passed: `pnpm --filter @paperclipai/ui build`. - Passed: `pnpm check:token-gates`. - The initial CI run passed full build, typecheck, Rust, unit tests and seven E2E shards. The attachment shard exposed tests that relied on the old self-selection default. The tests now select the recipient explicitly. - Native assignment regression tests and resolver tests pass: 40 tests. - Attachment E2E suite: 10 passed; one page-load timing failure passed on an isolated rerun. All 11 cases passed across the suite and rerun. - Previous full CI passed at |
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d837b65be8 |
refactor(server): move provider setup, inventory and delivery into channel folders (#16058)
Consolidate the ten reviewed provider-folder extractions. Preserve the verified source tree and current master changes. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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7d7f55e4be |
fix(apps): show user avatars and center access rows (#15577)
## Thinking Path > - Paperclip helps people manage AI agents and their access to apps. > - The app access page shows people with linked chat accounts. > - The identity response omitted the user's saved image. > - The row placed the avatar beside only the first name line. > - This change returns the image and centers the avatar beside both name lines. > - People can recognize linked accounts and still see initials when no image is available. ## Linked Issues or Issue Description **What happened?** The app access page showed initials even when the linked Paperclip user had a profile image. The avatar was above the vertical center of the Disconnect button. **Expected behavior** Show the linked user's saved image. Center it beside the Paperclip and chat names. Keep initials when no image is available. **Steps to reproduce** 1. Link a Slack account to a Paperclip user with a profile image. 2. Open the app's Access tab. 3. Inspect the person's avatar and the two name lines. Searched public issues and pull requests. No duplicate fix was found. Related avatar work in #15095 concerns agent uploads, not linked user profiles. ## What Changed - Return `paperclipUserImage` from the chat principal service and declare it in the API and client types. - Use the shared avatar primitives and center the avatar beside the full name block. Keep full names available in hover text. - Add image and initials examples to the existing Storybook access story, with image and alignment checks. - Extend the service test to check saved images and missing images. ## Verification - Token gates and `git diff --check` pass. - The 33 existing chat setup and identity-link UI tests pass. - The OAuth installer service regression test passes. - Chromium rendered the Storybook Access story at desktop and mobile sizes. The avatar, name block, and Disconnect button centers all measured 307 CSS pixels on desktop. - UI typecheck passes. Full repository typecheck and build stop at the Rust runner because this workspace has no `cargo`. The initial parallel typecheck also exceeded the 4 GiB workspace limit. The full local test attempt was stopped as memory approached the 4 GiB limit; it has no complete verdict. CI passed the full build, typecheck, test, and E2E lanes on the initial commit. The previously reviewed commit passed 54 checks with two intentionally skipped Storybook checks. Master was merged on October 10 to resolve an import conflict; fresh CI is running for `24badb742d331c1b6ee3e90cbd06defefe5cd634`. Token gates and whitespace checks pass after conflict resolution. The single retry after CI runner shutdowns passed. Greptile gives this commit 5/5, with both review threads resolved. ### Screenshots The Storybook fixture shows an image, fallback initials, and a pending account.   ## Risks Low risk. The API field is additive and needs no migration. The image uses the same avatar primitive as other user identities. Missing or failed images retain the initials fallback. Other chat providers share this access row. ## Model Used OpenAI Codex, GPT-6. Tool use and code execution. The runtime does not expose a more specific model ID or context window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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6c198d616e |
fix(issues): preserve human handoffs from the active agent run (#16082)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Tasks have one owner, and the server records assignment changes. > - An agent can finish its work by handing the task to a human for review. > - The assignment route stops the active run before it saves that handoff. > - When the caller is that run, a slow workspace restore can exceed the stop timeout and prevent the assignment from saving. > - Recovery can then mark the task Blocked while its comment says the handoff succeeded. > - This pull request lets the authenticated legacy run save a human handoff and finish its turn normally. > - Other actors and transfers to executable agents keep the verified stop requirement. ## Linked Issues or Issue Description Refs #13730. Related: #13782, #14700, and #15094. **What happened?** An agent posted its review handoff, then sent `PATCH /api/issues/{id}` to assign the task to its human creator with status `in_review`. The route cancelled that same run before saving the assignment. Workspace restore took 66 seconds. The stop limit is 60 seconds. The assignment never committed. Recovery marked the task Blocked, and it stayed assigned to the agent. **Expected behavior** The authenticated active legacy run can hand its own task to a human and finish normally. The human assignment and requested review status must save without waiting for workspace restore. Native runs, board reassignment, agent API keys, and transfers to another agent still require a verified stop. **Steps to reproduce** 1. Run a legacy agent on its assigned task with a signed run token. 2. Send a task PATCH from that run with a human `assigneeUserId`, a null `assigneeAgentId`, and status `in_review`. 3. Make stopping the sandbox take more than 60 seconds. Before this fix, the handoff fails before the task update. With this fix, the update saves and the run finishes normally. **Paperclip version or commit** Reproduced in hosted execution. The patch is based on master at `56a0bf0d492`. **Deployment mode** Hosted authenticated server with a legacy agent in a remote sandbox. The same route serves local deployments. PR #13782 proposes a broader exemption for all self-handoffs. This focused change limits the exemption to human recipients and legacy runs. It checks the exact active run, agent, company, and task, and it retains the stop requirement before an executable successor can take ownership. PRs #14700 and #15094 address later wake and recovery behavior after a reassignment stop. ## What Changed - Skip the reassignment cancellation only for an authenticated legacy run handing its own task to a human. - Reject later mutations from the outgoing run against its human-owned task, both in route authorization and under the update transaction locks. - Keep assignment permission checks, goal control, and queued human response protection. - Add route regressions for slow stops, active-run lookup, actor and runtime boundaries, recipient types, permission denials, and follow-up edits, completion, and reassignment. - Update the real HTTP low-trust handoff test to prove the run stays alive, its late edit fails, and the human wake receipt remains invalidated. - Add Postgres tests for saved assignment, former-owner rejection, and review state after the outgoing run succeeds or fails. - Document the handoff rule and update the task feature and agent access maps. ## Verification - 328 relevant tests passed across the route, issue service, low-trust HTTP, and legacy recovery suites. The route suite passed all 160 tests, and all 13 low-trust HTTP tests passed after updating the obsolete cancellation expectation. - Removing the production guard makes both slow-shutdown handoff regressions fail with HTTP 500. - `pnpm -r typecheck` passed. - `pnpm build` passed. - `node scripts/check-maps.mjs` passed. - `git diff --check` passed. - All 54 current-head checks passed; 2 optional Storybook checks were skipped. The CI lanes cover the full Vitest suite, typecheck/build, Runner checks, and product E2E checks. - Apex reviewed `c68fbfb356c3d80eb7136babb49940709a3c3459` at 5/5 with no findings; both earlier review threads are resolved. - The complete test lanes passed in CI. The duplicate local full `pnpm test:run` was stopped after CI completed; it did not finish locally. All 328 focused local tests and full local typecheck/build passed. ## Risks - The outgoing legacy turn stays alive after the human takes ownership. Route and transactional ownership checks reject its later mutations of the human-owned task. Read and comment access follows normal policy. Goal control still runs before the handoff. - This exemption does not apply to native runs or another agent as recipient. Those paths still stop the old execution before assignment. - This fix prevents future failed handoffs. It does not infer or replay old assignment requests. - There is no schema change or API shape change. ## Model Used OpenAI GPT-6 through Codex, with reasoning, repository tools, and code execution. The session does not expose a more specific runtime model ID or context window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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e168512f7b |
perf(chat): stop polling failed run retries (#15871)
Stop one-second scans of failed chat-run retries. Wake the existing retry queue after transaction commits and at saved retry or stale-claim deadlines. Preserve claim fences, authorization, recovery, and idempotent agent admission. Resolve conflicts with the current chat-service extraction by applying the retry signals and shared deadline predicate in the failed-run retry module. Verified with pnpm typecheck, pnpm build, all 1,328 chat and coordinator regression tests, and current-head CI. Greptile reviewed the final head at 5/5 with no unresolved threads. Co-Authored-By: Paperclip <noreply@paperclip.ing> |