4 Commits

Include renames

Author	SHA1	Message	Date
DottaandPaperclip	0f5fafe16b	fix(runner): preserve task replies and warm process continuity (#13738) ... ## Thinking Path > - Paperclip lets people manage AI agents and their work. > - The Runner connects provider sessions to task state, replies, and delegated work. > - Full-stack tests found lost final replies, rejected helper calls that stopped the parent, and unnecessary process restarts. > - A completed child could also receive a new assignment wake that the scheduler then cancelled. > - This change fixes those boundaries and gives agents clearer teammate instructions. > - The tests retain strict completion and process-continuity requirements. ## Linked Issues or Issue Description **What happened?** A generated attachment comment could suppress an agent's final reply. A known Codex helper could stop its parent when it requested a Paperclip tool. Native Daytona processes restarted between turns because Paperclip minted an unused GitHub broker token. Reassigning a completed child queued a run that immediately cancelled. Revision instructions also allowed agents to do work assigned to a named teammate themselves. **Expected behavior** Keep the final reply. Reject helper tool requests without borrowing parent authority or stopping the parent. Keep an unconfigured sandbox process alive between turns. Treat assignment-only changes to completed tasks as metadata changes. Preserve explicit teammate assignments during revisions. **Steps to reproduce** Run the retained Runner E2E cases for file handoff, teammate reuse, Daytona warm continuity, and Legacy Claude interview/plan acceptance. The focused regression tests reproduce the reply, helper, process-lifetime, and assignment-wake defects without provider calls. **Paperclip version or commit** The live lifetime and completion campaign used `db3857807`. This PR replays the changes on master `c65fc9e3c`. See Verification for the limits of that evidence. **Deployment mode** Isolated local instances and native Runner sessions in Daytona sandboxes. Related work: #13546 handles a different queued-run issue after an issue-lock compare-and-set failure. This PR prevents the unnecessary assignment wake earlier. #13410 covers retained user services; this PR covers the provider process. No duplicate fix was found. ## What Changed - Exclude generated deliverable-binding comments from final-reply deduplication. Preserve the attachment and explicit user-facing replies. - Reject Paperclip tool and input requests from known Codex helper threads without terminating the parent. Keep unknown-thread rejection intact. - Explain how to hire or reuse a persistent teammate and preserve named delegation on revisions. Update generated protocol fixtures. - Use stable, token-free GitHub wrappers for unconfigured native sandboxes. Preserve credential isolation, configured-account rotation, and cleanup after partial staging failures. - Do not queue assignment-only wakes for done or cancelled tasks. Keep explicit reopening behavior. - Make warm-continuity fixtures create real review cards. Read the persisted final response selected by production presentation logic. Missing selected evidence still fails. ## Verification - Before rebase: 560 focused route, native-executor, and launcher tests passed. The new regressions were reproduced before their fixes. - Live E2E: Legacy Claude interview/plan acceptance passed 3/3 repetitions. Daytona warm continuity passed 2/3 full repetitions. Each successful run retained one process and provider session for all three turns. - The remaining Daytona repetition stopped after a same-URL browser reload left the page blank. Both completed turns retained the same process. Its failed verdict remains unchanged; this PR does not claim the blank-page cause is fixed. - Reports: https://pages.paperclip.ing/runner-e2e-lifetime-race-20260920/investigation.html and https://pages.paperclip.ing/runner-e2e-behavior-followups-20260919-results/investigation.html - Post-rebase `pnpm build` and `pnpm -r typecheck` passed. All 414 Runner E2E harness unit tests and its typecheck passed. Codex protocol tests: 88 passed, 2 ignored. - Latest-head CI: 55 successful checks and 2 intentional skips. Greptile: 5/5 with no review threads. The unchanged workspace exposure tests hit a fixed-port collision on the first CI attempt; their local suite passed (25 tests, 3 platform skips), and the CI shard passed on one retry. - The duplicate local `pnpm test:run` was stopped after the full hosted general and serialized test shards passed. It did not finish locally and is not counted as a local full-suite pass. ## Risks Configured GitHub accounts retain run-scoped credential rotation and can still restart warm processes. That limitation requires a separate design. Known provider helpers cannot use Paperclip coordination tools directly; they must return findings to the parent. The delegation prompt is an instruction, not an enforced guarantee; Codex Mini hiring/reuse failures remain open. No schema or workflow changes are included. ## Model Used OpenAI GPT-6 through Codex, with repository tools, code execution, and parallel coding agents. The exact deployment suffix and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub issues and shared reports) - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run focused tests locally and they pass; full hosted test shards also pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-21 08:56:35 -05:00
Dotta	1dceee9a4e	fix(runner): persist warm Daytona workspaces (#12901) ... ## Thinking Path > - Paperclip manages AI agent work and the execution state for each task. > - Remote agents run in sandbox environments such as Daytona. > - Daytona keeps files while a sandbox is stopped, but deletion removes those files. > - Runner Codex did not copy successful remote workspace changes back to the host workspace. > - A warm sandbox could therefore hide data loss until Daytona replaced or deleted the sandbox. > - This pull request makes the host workspace durable after every successful turn and keeps verified reusable sandboxes warm. > - The benefit is reliable multi-turn work across warm reuse, restart, stop, and sandbox replacement. ## Linked Issues or Issue Description **What happened?** A successful native Codex turn in Daytona could leave workspace changes only in the remote sandbox. A later warm turn appeared to work because it reused that filesystem. A replacement sandbox could start from stale host data and lose the successful changes. **Expected behavior** Paperclip must merge each successful remote turn into the authoritative host workspace before it completes the run. A verified warm lease may reuse its remote files. A replacement lease must reconstruct the exact durable workspace seed. **Steps to reproduce** 1. Run Codex in a reusable Daytona environment. 2. Write a file during one successful turn. 3. Replace the Daytona sandbox before the next turn. 4. Observe that the next turn can start without the prior file on the unpatched code. Related remote workspace foundation: #10070. ## What Changed - Added explicit `host_current`, `durable_seed`, and `adopt_remote` workspace preparation modes. - Added atomic, versioned native workspace descriptors and seed archives under `PAPERCLIP_HOME`. - Added real native sandbox export and three-way host merge before terminal result completion. - Added workspace-only recovery after a proposed result. Recovery does not submit another provider turn or consume the provider retry budget. - Added fail-closed handling when a sandbox with unexported changes is gone. - Kept healthy reusable Daytona sandboxes started for legacy Codex and Runner Codex. - Kept the Runner Codex process and provider session across verified warm turns. - Added the paid `daytona-warm-continuity` browser suite. It contains exactly the legacy Codex and Runner Codex cells. Each cell performs three measured turns. - Documented `pnpm test:e2e:runner -- --suite daytona-warm-continuity`. No package script was added. - Added no database migration. The metadata format is backward compatible and idempotent. ## Verification - `pnpm typecheck` - `pnpm test:e2e:runner:unit` — 114 passed - Native workspace, finalizer, session, and environment tests — 232 passed - Daytona provider tests — 150 passed - Workspace staging and merge tests — 98 passed - Runner transport tests — 63 passed - Legacy Codex restore tests — 5 passed - Rust format and compile checks pass through root typecheck - The paid Daytona suite was not run locally because the required Daytona, OpenAI, and immutable image credentials are not present. ## Risks - The main risk is an incorrect workspace identity or merge after a crash. Durable descriptors bind the run, workspace, lease, provider lease, local root, remote root, and baseline digest. Ambiguous evidence fails closed. - The host merge may conflict with concurrent host edits. The existing three-way merge and exclusion rules handle this case and surface failures. - A deleted sandbox cannot recover unexported bytes. Paperclip now blocks with `workspace_sync_out_unrecoverable` instead of reporting success or rerunning the provider. - There is no database migration. Descriptor writes and recovery are atomic and idempotent. ## Model Used OpenAI Codex with GPT-5. The run used agentic reasoning, repository inspection, code execution, test execution, Git, and GitHub CLI tools. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge	2026-09-05 13:00:57 -05:00
Dotta	0f94521017	fix(runner): restore local session and task integrity (#12721) ... ## Thinking Path > - Paperclip is the control plane for agents that perform work. > - Paperclip Runner connects durable provider sessions to individual task runs through PRP. > - Provider continuity and per-run authority are different lifetimes. > - The existing implementation mixed those lifetimes and lost event metadata between provider frames, runnerd, persistence, API sanitization, and the task thread. > - That caused failed continuation, missing progress and Plans, duplicate replies, hidden failures, and unsafe recovery. > - This repair gives every heartbeat fresh authority, preserves qualified provider-session continuity, and restores one lossless presentation path without changing direct adapters. ## Linked Issues or Issue Description **What happened?** A second native heartbeat could reuse tickets, leases, command receipts, sequence state, and run identity from the first heartbeat. Provider phase and item identity could be lost before the UI read them. Redaction could corrupt protocol discriminators while still missing malformed credential tails. The task thread could fold progress into the final response, hide failures, or show more than one final answer. Native Codex also exposed approval modes that do not yet have a durable approval bridge. **Expected behavior** Each heartbeat uses a new PRP authority epoch. Codex and OpenCode preserve exact qualified provider sessions; ACPX emits an explicit continuity event when its qualified process-replacement policy is used. Every accepted provider event is presented, classified as internal, or surfaced as unsupported. The task page shows chronological progress, reasoning summaries, activity, Plans, interactions, terminal failures, and exactly one final reply. Direct adapters retain their existing path. **Steps to reproduce** 1. Enable the unified experimental Paperclip Runner setting. 2. Create a local native Codex, OpenCode, ACPX Claude, or ACPX Codex agent. 3. Run response, Plan, structured-question/resume, restart, cancellation, and failure scenarios. 4. Reload the task while active, waiting, failed, and settled. 5. On the old implementation, observe stale run authority, missing classifications, incomplete output, or duplicated/folded replies. **Paperclip version or commit** The repair is based directly on `master` at `87d05e194b643810d16d20612115acd01d735d43`. **Deployment mode** Local development with the embedded database. Related work: Refs #12616, #12646, #12666, #12685, and #12700. ## What Changed - Rotates PRP control-plane, outbox, ticket, lease, command, receipt, and sequence authority for each heartbeat while carrying forward only a validated provider-session identity. - Reads `control-plane-state.json`, validates both durable schemas and lifecycle values, resumes coherent current runs, archives qualified settled authority, and quarantines malformed or mismatched scoped state without moving ambiguous live legacy state. - Preserves Codex provider phase and stable item identities so commentary remains progress and only `final_answer` becomes final. - Adds raw OpenCode HTTP/SSE boundary coverage and canonical reasoning lifecycle mapping. - Makes ACPX normalization lossless for visible reasoning, tool lifecycle metadata, stable bounded identities, Plan revisions, structured requests, failures, and qualified process replacement. Only the compatible terminal assistant message is promoted as final. - Applies schema-aware redaction before generic JWT-shaped detection and scans every diagnostic string leaf. Malformed raw/escaped quoted credential tails are redacted in both server and durable Rust state. - Restores snapshot-style chronological task presentation, expandable tool activity, inline Plan cards, visible waiting/resume/cancel/failure states, and exactly one final answer. - Makes `never` the only qualified native Codex permission mode and rejects unsupported persisted native modes with remediation. OpenCode and ACPX policies remain intact. - Keeps the unified experimental Runner setting as the only enablement flag. Onboarding and direct Codex, Claude, and OpenCode stay on their legacy execution/finalization paths. - Adds cross-language goldens, authority/recovery/fault coverage, exact response/count assertions, and native plus legacy acceptance scenarios. ## Verification - Pull-request GitHub Actions run Rust formatting/tests, TypeScript checks, server/UI tests, builds, protocol drift checks, browser E2E, and security scans. - A separate workflow-only validation ref is pinned directly on this PR head and runs the 35-cell paid local matrix: three core scenarios plus structured-question resume and restart/resume for native Codex, native OpenCode, ACPX Claude, ACPX Codex, and direct Codex/Claude/OpenCode. Run: https://github.com/paperclipai/paperclip/actions/runs/33682434315 - Acceptance requires exact single visible replies, monotonic sequences, matching envelope discriminators, one semantic terminal, one run terminal, no unresolved interaction, no duplicate mutation, no secret leakage, provider continuity, and zero native rows for direct adapters. - Per maintainer direction, tests are running in GitHub Actions rather than on the slower local host. Only formatters and static diff checks were run locally. ## Risks - Recovery from old or partial filesystem state is sensitive. The repair fails closed, preserves active or unverifiable authority, and quarantines only state whose scoped ownership is safe to move. - Provider event formats can change. Closed validators and boundary goldens turn new or malformed events into visible diagnostics instead of silent drops. - Shared task presentation could affect direct adapters. Runtime-fact gating plus the direct-adapter matrix protect the existing path. - Managed and remote providers are not qualified here. Shared code continues to compile and fail safely, but live qualification is deferred. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used OpenAI Codex based on GPT-5. The exact deployed snapshot and context-window size are not exposed to this task. It used agentic reasoning, repository inspection, code editing, Git, parallel subagents, and GitHub Actions. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change and contains no internal Paperclip ticket id - [ ] I have run tests locally and they pass (intentionally deferred to GitHub Actions) - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented risks above - [ ] All Paperclip CI gates are green - [ ] The paid local-provider matrix is green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge	2026-09-02 16:11:26 -05:00
Dotta	5716fe907e	test(runner): add full-stack acceptance and eval gates (#12700) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The runner subsystem executes agent work across local and managed provider backends. > - The lower pull requests restore the task runtime, provider backends, and managed-provider control plane. > - The restored system needs repeatable full-stack checks before it can ship safely. > - Paid live checks also need clear access, cost, and secret controls. > - This pull request adds acceptance, live evaluation, chaos, and release gates for the restored runner stack. > - The benefit is measurable runner parity with safer release decisions. ## Linked Issues or Issue Description **Subsystem affected** Cross-cutting. This change covers runner tests, release workflows, server contracts, and evaluation tools. **Problem or motivation** The runner stack did not have one complete acceptance surface for native Codex, ACPX, Claude Managed, and AWS AgentCore. Release checks could miss provider drift, task-view regressions, cost-policy errors, and destructive cleanup errors. **Proposed solution** Add a 57-cell full-stack catalog, a Daytona image, and opt-in paid workflows. Add live evaluation, chaos, cost-limit, redaction, and release contract checks. Add AWS AgentCore infrastructure and guarded provisioning tools. Keep the native runner experimental flag off by default. **Alternatives considered** We considered manual smoke tests only. They do not give repeatable evidence and they do not protect release branches. We also considered one large pull request. The stacked pull requests keep each review below the Greptile file limit. **Roadmap alignment** This work supports the shipped Cloud / Sandbox agents milestone and the shipped Agent evals & feedback milestone in `ROADMAP.md`. Related stack: - #12699 adds managed provider backends and lifecycle support. - #12691 adds qualified OpenCode and ACPX provider backends. - #12685 restores task runtime rendering and steering. ## What Changed - Add the runner full-stack harness with 57 catalog cells and 60 unit tests. - Add a Daytona runner image with digest-pinned base images and base-aware image-content checks. - Add guarded live evaluation and chaos workflows with a fixed 40-execution matrix; live and full-stack paid schedules now run only on Sundays or by manual dispatch. - Add in-flight reported-usage cost stops, post-turn cost caps, exact-threshold failure classification, secret redaction, retry classification, and actor authorization. - Reattach stream and hard-budget listeners before restart-recovery continuations so restored paid sessions cannot bypass in-flight interruption. - Preserve OpenCode usage and cost across tool-loop messages and turns while exposing an explicit current-run delta to durable accounting. - Keep PNG/WebM evidence in access-controlled artifacts only, reject SVG, and publish only pruned inert structured per-attempt evidence. - Add AWS AgentCore infrastructure, provisioning checks, and smoke tools; reject unsafe model identifiers, require exact stack ownership markers, and make failed-stack replacement explicit. - Add evaluation-session contracts and capability reports. - Add release workflow checks for immutable action pins, frozen dependency installs, exact weekly cron shape, paid-run guards, provider-secret isolation, and chaos test paths. - Reauthorize the original and triggering numeric actor IDs as the first step of every provider-secret job, including partial reruns, before checkout or provider access. - Give each full-stack matrix cell only its matching provider credential, expose Daytona only to Daytona cells, and disable shared dependency caches anywhere paid credentials or OIDC write access are present. - Protect the legacy manual E2E workflow with the same default-branch, allowlist, environment, and per-job authorization boundary. - Rotate live-eval candidates by week and retain 120 days of compatible history so the seven-week trend window remains viable. - Restore the root runner-acceptance commands and reconcile reported snapshots, raw receipts, and terminal usage without double counting or losing late usage. - Mark ACPX token deltas exact only when every budget field is present, keep cumulative cost/request authority separate, reject non-USD cost labeling, and include thought tokens in output-token budgets. - Keep `enableNativeRunner` off by default. The acceptance harness enables it only in its isolated test instance. ## Verification Passed locally: - `pnpm --filter @paperclipai/paperclip-runner typecheck` - `pnpm test:runner-acceptance:typecheck` - `pnpm test:runner-acceptance` (19 tests) - focused OpenCode proxy, driver, runnerd transport, live-session, and turn-stream tests (106 tests) - `pnpm --filter @paperclipai/paperclip-runner exec vitest run src/live/clean-room-server.test.ts` (22 tests) - `pnpm test:e2e:runner:typecheck` - `pnpm test:e2e:runner:unit` (62 tests) - `node --test scripts/__tests__/release-verify-workflow.test.mjs` - `pnpm --filter @paperclipai/paperclip-runner test:runner-workflow-evals` (22 tests) - `pnpm -r typecheck` - `pnpm build` - `node --test packages/paperclip-runner/scripts/aws-agentcore-provisioning.test.mjs` (6 tests) - `git diff --check` - `cargo test --manifest-path packages/paperclip-runner/runner/Cargo.toml -p paperclip-runner-core --lib --locked` (161 tests) - focused ACPX provider-event tests (10 tests) - The rebased PR changes 92 files. `pnpm-lock.yaml` is unchanged. I did not run paid live provider jobs or provision AWS resources. Those checks need credentials and can create cost. ## Risks The paid workflows can create provider cost. They require an allowlisted original and triggering actor, the protected `runner-e2e-paid` environment, explicit opt-in variables, and cost limits. The four provider credentials exist only in that master-only environment, which requires allowlisted reviewer approval and disables administrator bypass; repository and organization Actions scopes contain no copies. Provider usage arrives after a billable request, so the live guard cannot prevent one request from crossing a threshold. It interrupts immediately on the first reported threshold hit and permits no continuation. Visual evidence can contain secrets rendered as pixels. PNG/WebM remain only in access-controlled workflow artifacts; SVG and per-attempt XML are excluded, and S3/Pages receive a pruned structured dashboard. The AWS scripts can create cloud resources. They use explicit commands, least-privilege roles, KMS encryption, saved nonsecret metadata, and explicit teardown. This pull request does not enable the experimental native runner for existing instances. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used OpenAI Codex with GPT-5. The model used extended reasoning, tool use, code execution, and parallel subagents. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge	2026-09-02 08:55:08 -05:00