Commit Graph
1506 Commits
Author SHA1 Message Date
DottaandPaperclip 170652d2d4 Declare and validate bound ACP permission request envelopes
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-28 12:27:55 -05:00
DottaandPaperclip c8fc6047f3 Normalize optional Codex question descriptions before durable validation
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-28 12:24:56 -05:00
DottaandPaperclip 04b88a97f5 Preserve ACP turn ordering when negotiated controls are unchanged
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-28 12:19:29 -05:00
DottaandPaperclip 0adc3b1a5e Admit candidate authentication from sanitized launch bindings
Allow candidate profiles to report missing authentication before native initialization stalls.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-28 12:15:13 -05:00
DottaandPaperclip 0ece23ad7d Canonicalize native pack staging paths and format durable expiry fixtures
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-28 12:09:14 -05:00
DottaandPaperclip 2ed1540570 Merge current master and validate negotiated ACP capability envelopes
Synchronize with master 14795136f5 while retaining the recorded implementation base. Regenerate protocol contracts and preserve both input-presence and permission-scope checks.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-28 12:07:57 -05:00
DottaandPaperclip a5ff475ecb Expose negotiated ACP turn controls through durable and direct sessions
Propagate live Pi steering and native queued follow-up capabilities after session open and lazy warm prompt initialization. Preserve conservative static declarations, reject forged capabilities and malformed control modes, and admit only profile-bound candidate credentials at the Rust sidecar boundary.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-28 12:05:11 -05:00
DottaandPaperclip 51db509899 Expire durable ACP interactions when their provider turn is lost
Retain a bounded private pending-request ledger across controller and runner reconnects. Emit non-replayable expirations before terminal facts, preserve complete questions, and never restore approvals or mutations after provider loss.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-28 12:04:42 -05:00
DottaandPaperclip d4e953e443 Await provider reply delivery in the direct ACPX driver
Fail closed without reporting resolution when the pipe write is ambiguous. Preserve provider-supported Copilot session permissions.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-28 12:03:50 -05:00
DottaandPaperclip 588dd00af1 Bind candidate diagnostics and recovery to explicit runner policy
Preserve Pi pricing receipt provenance, require evaluation opt-in, and record qualification boundaries.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-28 11:55:09 -05:00
DottaandPaperclip 84336a1b7d Preserve pinned Pi assistant and compaction receipt provenance
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-28 11:52:33 -05:00
DottaandPaperclip d82739164d Confirm ACP interaction replies reach the provider pipe before settlement
Bind response receipts to the active stream, request and prompt; reject cancellation, disconnect, write failure and mismatched responses before acknowledging durable delivery.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-28 11:50:35 -05:00
DottaandPaperclip 6ff8f78216 Allow explicitly selected candidate ACPX eval diagnostics
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-28 11:47:46 -05:00
DottaandPaperclip 7cf00e0072 Deliver negotiated ACP steering and queued follow-ups through durable runner controls
Bind controls to the active turn and reserve bounded delivery identities before dispatch; preserve explicit provider policy and Pi receipt estimates across both runner paths.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-28 11:43:24 -05:00
DottaandPaperclip 88f34b30f8 Bind sessionless ACP extensions to their admitted wire session
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-28 11:43:24 -05:00
DottaandPaperclip 1cee50ed48 Bind optional ACP candidate assets into local and Daytona provider packs
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-28 11:39:26 -05:00
DottaandPaperclip 411df9fa58 Bind candidate runtimes to task policy and separate Pi price estimates
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-28 11:35:14 -05:00
DottaandPaperclip a5e26ecc04 Resolve native provider assets through the runner package authority
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-28 11:34:04 -05:00
DottaandPaperclip 37e6ebbc51 Preserve rich ACP inputs and activity through runner and UI
Bind provider extensions to active turns, drain activity before settlement, preserve complete plan decisions, and expose bounded provider notice details. Keep new harness choices disabled until qualification.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-28 11:26:14 -05:00
DottaandPaperclip 2de5c04c9a Preserve scoped Pi prompt receipt provenance and cost through ACPX
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-28 11:26:11 -05:00
DottaandPaperclip 7e2e7e1c35 Fence permission requests to the admitted ACP session
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-28 11:23:59 -05:00
DottaandPaperclip 94724d1414 Preserve schema-bounded ACP display activity through durable projection
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-28 11:23:17 -05:00
DottaandPaperclip 4a278e2740 Fence ACP extension callbacks and Pi controls to active turns
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-28 11:22:09 -05:00
DottaandPaperclip ae15ff4c3f Isolate candidate ACP runtime credentials and provider homes
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-28 11:18:52 -05:00
DottaandPaperclip 384ea84546 Declare rich ACP profile capabilities and qualification gates
Keep Cursor, Copilot and Pi unavailable until qualification; require explicit new-provider models without substitution and bind new native candidates to versioned profiles.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-28 11:14:45 -05:00
DottaandPaperclip af61365ea5 Verify complete native ACP distributions under existing lifetime guardian
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-28 11:14:34 -05:00
DottaandPaperclip c810a25db2 Carry ACP permission requests through durable runner resolution
Validate provider-supported choices, fence resolutions to the active turn, retain pending state until sidecar acknowledgement, and preserve complete bounded plan documents.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-28 11:10:36 -05:00
DottaandPaperclip 8193cb2571 Add prompt-bound ACP extension requests and event hooks
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-28 11:07:38 -05:00
DottaandPaperclip 14795136f5 fix(runtime): finalize and recover sandbox workspace exports safely (#14402)
Serialize native workspace finalization, validate streamed archives within bounded limits, and quietly recover unsafe exports from saved results. Preserve exact allocations for exhausted transient failures and provide export-only retry without rerunning the provider.

Consolidates #14314, #14315, #14329, and #14334 while preserving the already-merged finalization label changes.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-28 10:57:32 -05:00
DottaandPaperclip 3447609d22 fix(runner): stream and page large API responses within capture budgets (#14301)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Agents use governed API tools to inspect task evidence.
> - Large API results become saved assets with short previews.
> - Reading an asset through the same tool used to create another asset,
so the agent could not reach the rest of the evidence.
> - The 10 MiB response cap also blocked useful large results. Removing
all bounds allowed excessive disk use.
> - This pull request streams responses up to 1 GiB and makes saved text
readable in bounded pages. It adds durable run budgets and capture
admission limits.
> - Agents can inspect complete evidence while tool results, memory use,
and capture work stay bounded.

## Linked Issues or Issue Description

**What happened?**
A large response became an asset. Reading that asset returned another
asset and the same preview. Responses above 10 MiB failed before the
agent could read any page.

**Expected behavior**
The agent can fetch a large response and read its saved text to EOF.
Each page stays bounded. New snapshots have a generous finite limit and
a durable run budget. Existing larger assets remain readable through
byte ranges.

**Steps to reproduce**
1. Call a GET operation that returns more than 10 MiB of text or JSON.
2. Before the fix, the tool returns `api_transport_failure`.
3. With this change, responses up to 1 GiB become streamed snapshots
with artifact references.
4. Read `GET /api/assets/{assetId}/content` with `responseText:
{offsetBytes: 0, limitBytes: 8192}`. Follow `nextOffsetBytes` until
null.

Related work: #14186 added the API fallback tools. #14218 bounded API
discovery.

## What Changed

- Add authenticated UTF-8 text windows to `call_api`, with byte offsets
and total size. Keep each page at or below 24 KiB.
- Stream new responses above 24 KiB through private temporary files into
company-owned assets. Bound each capture to 1 GiB of decoded bytes.
Reject oversized declared lengths before reading and count streamed
bytes before writing.
- Reserve capture budget in the run record before spilling. Allow 4 GiB
per run. Settle successful captures to their actual size. Failed or
interrupted captures retain their full 1 GiB reservation. Run restarts
do not reset the budget.
- Enforce a 20 GiB company snapshot quota with database reservations.
Count legacy snapshots and unfinished storage work across runs and
processes. Asset deletion frees quota.
- Limit large captures to two per company and four per server process.
Hold slots through storage upload and temporary-file cleanup. Use a
10-minute download deadline and 30-second connection/idle-read timeouts.
- Return explicit size, budget, busy, and timeout errors. Preserve
unknown outcomes for mutations whose response cannot be captured.
- Read saved assets through authenticated storage ranges, with at most
two extra bytes for UTF-8 and EOF handling. Unpaged reads return the
existing asset and digest with a bounded preview. Reads create no copies
and do not consume capture budget.
- Keep existing assets above 1 GiB readable in pages. Use safe integer
offsets and PostgreSQL `bigint` asset sizes.
- Stream large S3 uploads through ordered multipart requests. Abort
failed uploads and remove partial local files.
- Revalidate run authority during downloads. Keep company authorization,
GET-only text paging, redirect denial, and mutation replay receipts.
- Document the separate 10 MiB upload limits. This PR does not raise
memory-buffered attachment ingestion limits. Future large video uploads
need streamed ingestion and storage quotas.

## Verification

- Full workspace `pnpm -r typecheck` and `pnpm build` pass after
rebasing on master.
- Focused API and response tests: 1,761 pass. Cover declared and chunked
oversize responses, incorrect Content-Length, exact-limit success,
active-stream deadline, cancellation, cleanup, concurrency admission,
and mutation outcome handling.
- Real HTTP integration: 28 tests pass, including runnerd → PRP →
authority → HTTP, a 12 MiB snapshot, final-page/EOF reads, cross-company
denial, a persisted 3 GiB sparse asset, and large mutation receipt
replay.
- The HTTP suite verifies durable run-budget accounting, simultaneous
runs competing for company quota, legacy snapshot accounting, deletion
refunds, failed-storage reservations, cleaned-failure refunds,
metadata-rollback cleanup refunds, preservation after a lost commit
acknowledgement, and small/saved reads after capture-budget exhaustion.
- A standalone proof streams exactly 1 GiB through the production
capture helper, verifies the final bytes, and removes its temporary
file. It uses repeated 256 KiB chunks and records a peak process RSS of
191 MiB.
- Earlier storage verification covers exact S3 multipart boundaries,
cleanup/abort failures, and a 17 MiB transfer through the real AWS SDK
to a local HTTP S3 endpoint. No cloud S3 qualification was run for this
follow-up.
- The local full test run was interrupted for the company-quota changes.
A later targeted run hit exhausted macOS shared-memory slots before
tests started; two unattached PostgreSQL segments with dead owners were
reclaimed before retrying. All 55 current-head checks pass at
`aebb80ceeeee77d5a56b67bfffd835f2f846878c`, including the full CI test
suite, typecheck, build, browser suites, security scan, and Greptile
(5/5). There are no unresolved review threads. The combined rebased test
catalog also passes (48 tests).
- Earlier paging acceptance passed Daytona and separate staging at
`7739879e9`. Those runs predate the streaming and budget changes.

## Risks

- The 1 GiB response cap and 10-minute active-download deadline are
intentional product limits. Larger live results must use endpoint
pagination or a direct file workflow. Existing larger assets remain
readable through bounded ranges.
- A durable 20 GiB company snapshot quota counts stored runner-api
assets and active/orphan reservations across runs and processes. The
operator can set PAPERCLIP_RUNNER_API_COMPANY_CAPTURE_MAX_BYTES to a
finite value of at least 1 GiB. Deleting snapshots frees capacity;
possible orphan storage must be reconciled before releasing its
reservation.
- A failed capture uses its full reservation. A new large capture needs
a full 1 GiB available, even if it later completes at a smaller size.
Small reads and existing asset pages remain available.
- Concurrency limits apply per server process. The run byte budget is
shared through the database.
- The `integer` to `bigint` migration rewrites asset metadata and takes
an exclusive table lock. File bytes stay in storage.
- A live endpoint is fetched once before returning its snapshot.
Continue reading the saved artifact for stable pages. Mutations may
commit before any size or transport error; inspect state before
retrying.
- Attachment uploads and native file handoffs still default to 10 MiB.
Raising buffered ingestion paths to GiB sizes is separate work.

## Model Used

OpenAI Codex, based on GPT-6, with code execution and repository tools.
The runtime does not expose an exact serving model variant or
context-window size. The earlier paging work also used browser testing
and subagents.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-28 10:36:32 -05:00
DottaandPaperclip 8751e2de46 fix(ui): distinguish finalization recovery from live observation (#14326)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The task board shows which recovery actions are active.
> - A native run can stop while a person must repair its workspace.
> - The board previously called that state “Recovery in progress.”
> - The label implied that work would continue without operator action.
> - This pull request derives the label from the recovery owner and live
continuation.
> - Operators can distinguish scheduled recovery from a repair that
needs attention.

## Linked Issues or Issue Description

**What happened?**
A blocked task showed “Recovery in progress” after native finalization
stopped and no automatic continuation remained.

**Expected behavior**
Show “Recovery needed” for an idle board repair or when no live recovery
path exists. Show “Recovery in progress” while the recorded continuation
can run, including an explicitly admitted export whose exact callback is
executing even if the old recovery action remains board-owned.

**Steps to reproduce**
1. Complete a native run whose workspace export cannot be recovered
automatically.
2. Inspect the task recovery action and badge.
3. Compare the board-owned action with the old “Recovery in progress”
label.

Related work: #14314 serializes native workspace finalization and fences
stale recovery outcomes. This change reports the recovery action that
currently owns the task.

## What Changed

- Show “Recovery needed” for board-owned active-run recovery unless the
exact native export callback is positively verified as executing.
- Require the native continuation run and a live or future continuation
before showing progress.
- Project native activity from the exact company, source issue, and run.
Include active workspace export while the original heartbeat remains
failed.
- Require an executing callback before using a running export row as
evidence. Preserve activity for long exports and clear it when the
callback joins.
- Give native resume its own card explanation. Preserve ordinary
watchdog observation behavior.
- Remove the redundant ownership sentence from all six recovery-card
explanations that used it.
- Document the labels and add regression cases for stopped, scheduled,
and active recovery.

## Verification

- Copy-only follow-up (`c68aef04c`): all 167 focused recovery UI tests
and token gates pass. No UI occurrence of the removed sentence remains.
`pnpm -r typecheck`, `pnpm build`, and current-head CI pass (54
successful checks, two optional Storybook checks skipped). Greptile is
5/5 with no open review threads. The duplicate local `pnpm test:run` was
stopped after the full CI suite passed; it did not complete locally.
- Original regressions: seven failures before the change, then 52
focused cases pass.
- Review regressions: seven UI failures and nine database failures
before the follow-up. All 75 database/API recovery tests, 167 UI tests,
and 18 workspace lifecycle/finalizer tests pass. A further three RED
cases cover explicit board retry activity; one RED case rejects orphaned
running export rows after controller loss. Wrong company, issue, run,
service, phase, and completed-operation cases remain inactive.
- Final recursive typecheck, production build, token gates, and complete
local suite coverage pass. Embedded PostgreSQL startup/socket failures
passed in isolated retries with the canonical test environment; no
expected behavior was weakened. The recovery regression added during the
earlier full run passed in its final complete 75-case file.
- Before the copy-only follow-up, all 56 CI checks passed on
`c2f84cd89c905cda85c53aaf5bb83b7250900fe6`; Greptile is 5/5 with no
unresolved review threads. The final native-activity staging repeat
passed on integrated source `2bedd0f23bf4698b1f8b818f6796900647030427`.
- Verified on a separate staging instance: a real failed Daytona
workspace export retains its board-owned repair action and displays
“Recovery needed” in the task list. The repair card remains actionable
without starting another provider turn.

- Real staged export-only repair: the actual task list showed “Recovery
in progress” while the original run had a positively identified running
export operation, then Done after exact copyback of all 20,000
nonce-bound files. The accepted result and full provider
session/turn/terminal envelopes remained unchanged. All 17 independent
final checks passed; the browser downloaded the exact 19-byte result.
The separate fixture was cleaned up with independent provider-absence
verification. A control transport process restarted during repair; it
did not submit another provider turn.

- Final deployed-source repeat on
`d884e1ab046cc76004e35e6091e9e6e2c918c9eb`: explicit per-turn ephemeral
Daytona allocation, actual browser export repair, and a saved full
activity projection referencing the exact executing export operation
with no scheduled retry. The task list showed recovery in progress, then
Done; all 21 final checks passed, including 20,000 exact host files,
unchanged provider provenance, and provider deletion only after
committed copyback. The downloaded 19-byte result matched independently.
This integrates #14334; no source change was required here.

## Risks

- The label depends on the persisted recovery action. A separate runtime
defect can still stop work; this change makes that condition visible.
- Future recovery kinds must supply a valid continuation path before
they can display progress.

## Model Used

OpenAI Codex, based on GPT-6, with code execution, browser testing, and
subagent tool use. The runtime does not expose an exact serving model
variant or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-28 09:33:39 -05:00
DottaandPaperclip cbc5132e6c fix(adapters): expose a verified provider stop before workspace restoration (#14311)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Agent adapters own local or remote provider processes.
> - Run cleanup must know when the final provider process has stopped.
> - A remote timeout or a lost transport does not prove that the
provider stopped.
> - Retried provider invocations also make an earlier stop signal stale.
> - This pull request adds a verified final-invocation stop callback
before workspace restoration.
> - The dependent instruction revision change uses that boundary to
preserve private instruction edits safely.

## Linked Issues or Issue Description

**What happened?**

Adapter completion did not expose a reliable point between provider
shutdown and workspace restoration. Cleanup could lose provider-written
files, or treat a remote timeout as proof that a process stopped.

**Expected behavior**

Cleanup runs once after the final provider invocation has a verified
stop receipt and before workspace restoration. An incomplete remote
command keeps collection pending.

**Steps to reproduce**

1. Run a remote provider that returns a timeout without a numeric exit
code.
2. Let the adapter return or retry the provider.
3. Attempt to collect provider-written files during cleanup. The adapter
has no verified final-process boundary to use.

This is the prerequisite for the stacked canonical instruction revision
pull request. It has no database or UI dependency. Related #13291
verifies remote termination for later recovery; this change exposes the
earlier adapter-owned stop boundary before workspace restoration. The
scopes do not duplicate each other.

## What Changed

- Add a stop callback to adapter execution context and a
final-invocation fence.
- Confirm local child closure and complete remote exit receipts. Reject
remote timeouts, missing exits, transport failures, and SSH exit 255 as
stop proof.
- Invoke collection once before workspace restoration in eight CLI
adapters and at the confirmed ACP stop boundary.
- Preserve the stop observation when a later log flush fails.
- Run bridge and workspace cleanup in `finally` even when collection
rejects. ACP records a safe error without exposing a raw filesystem
path. Grok keeps collection errors separate from workspace restore
failures and preserves completed provider results when both cleanup
steps fail.
- Correct the existing Cursor test shell fixture so bounded remote file
reads run against real fixture files.

## Verification

- Three stop-boundary regressions failed before the callback
implementation and passed after it.
- Independent prerequisite branch: 377 tests passed across 24 adapter,
process-target, and ACP suites. Two added collector-rejection tests
failed before the cleanup fix and passed after it.
- A third regression reproduced Grok misclassifying a collection failure
as failed workspace restoration. Two additional cases covered completed
and failed provider turns when collection and restore both fail. The
Grok and restore-classifier suites passed 48 tests.
- All nine affected package typechecks and affected package builds
passed; Grok checks passed again after its classification fix.
- Integrated instruction branch: native local, legacy local, and native
Daytona each passed three browser tasks with exact persisted bytes,
fresh-task readback, history/restore, and explicit conflict resolution.
Unchanged warm Daytona passed three turns. Legacy Codex passed all five
checks again after the exception-safe cleanup fix.
- Alternate staging passed the same three-task native Daytona flow:
exact stopped-run save, independent downloaded readback, browser
history/restore, and explicit resolution of a real concurrent edit. The
deployed source was `14c3d810c9e05625121b3d27767aea9317b03125`, which
covers the initial adapter callback. Later Grok cleanup failures are
qualified by the adapter tests above.

- The final combined native Daytona flow passed again on deployed
`2bedd0f23bf4698b1f8b818f6796900647030427`: three fresh tasks proved
ordinary instruction edits, independent readback, History/Restore,
concurrent board conflict, and explicit candidate resolution. This
native staging flow does not claim to exercise the Grok adapter.

## Risks

- An unverified remote stop intentionally does not trigger collection. A
later controller with verified stop evidence must recover it or report
the copy unavailable.
- The callback is optional. Callers that do not register it retain their
existing behavior.
- The callback runs before workspace restoration and can delay cleanup
if its caller does not bound its own work. The dependent instruction
collector uses bounded reads and retries. A rejected callback still
permits bridge and workspace cleanup; it cannot claim an instruction
save.

## Model Used

OpenAI Codex, GPT-6, with tool use and code execution. The runtime does
not expose the exact deployment variant or context-window size. Multiple
Codex agents implemented and verified the change.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-28 08:45:53 -05:00
DottaandPaperclip 4b38db9622 fix(runtime): stream workspace Git snapshots through disk manifests (#14253)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Managed runs copy a selected workspace to an execution environment
and restore its changes.
> - Git snapshots select the files for that copy and for later recovery.
> - A fixed output limit stops large generated trees before the run can
start.
> - Increasing the limit still keeps the complete filename lists in
memory.
> - This pull request stores those lists and merge baselines in disk
manifests.
> - Large snapshots can now complete with bounded filename buffers and
explicit failure handling.

## Linked Issues or Issue Description

Refs #14194. This is the streaming follow-up to the merged 32 MiB limit
fix.

Related: #13619 and #11621 cover workspace scan admission and demand.
This change keeps the shared scheduler and changes the snapshot data
path.

## What Changed

- Stream changed, untracked, deleted, and ignored paths through the
shared scheduler and the standalone adapter path.
- Use SQLite manifests for file selection, duplicate removal,
ignored-path lookup, baseline capture, and merge lookup.
- Set a configurable 30-minute snapshot deadline. Keep the existing
interactive scan deadlines.
- Wait for each child process and pending sink write before removing
temporary storage after failure or cancellation.
- Use NUL archive lists and bounded deletion batches. Preserve unusual
names, explicit selection, nested repositories, and source root checks.
- Store manifest references in native recovery format v2. Check their
location and digest before recovery reads. Keep v1 descriptors readable.
- Remove temporary manifests at lifecycle completion. Use fixed-size
temporary copy names for long basenames.
- Admit each manifest with a SQLite page allowance based on current disk
capacity. Keep a configurable free-space reserve and fail explicitly
when either limit is reached.
- Preserve a host file that replaces a directory deleted by the sandbox,
and continue the rest of the restore.

## Verification

- Current head `5ab622ec43cd16d35429d79dedee6a5d8e3d2df2` has 54
successful checks/statuses and two skipped Storybook jobs. No checks
failed or remain pending.
- [CI
passed](https://github.com/paperclipai/paperclip/actions/runs/36318966368):
typecheck, build, all test shards, E2E, Rust checks, and the aggregate
verify job.
- [Greptile is
5/5](https://github.com/paperclipai/paperclip/pull/14253#issuecomment-5855670338)
on the current head. All four review threads are resolved. Security
checks passed.
- 229 focused tests passed across Git sync, runtime staging, merge,
manifest integrity, native recovery, and the scheduler (214
adapter/runtime tests and 15 scheduler tests).
- A real 40,000-file fixture produces 43,428,890 filename bytes. The
original standalone and scheduled scans fail. The new test passes all
four filename paths, complete staging, exclusion of late files, unusual
names, and deletion replay.
- Recovery tests reject changed bytes, symlinks, and paths outside the
controller state directory. Adapter-utils typecheck passed.
- A test executor returned buffered output and caused two retry
integration failures. The fixture now uses the shared streaming
scheduler. All 13 tests passed with `corepack pnpm exec vitest run
server/src/__tests__/heartbeat-project-repositories.test.ts`. The same
CI shard now passes.
- Ran `pnpm -r typecheck`, `pnpm test:run`, and `pnpm build` locally.
Each full local command hit SIGKILL/exit 137 in the 4 GiB container.
These local commands did not pass. The current-head CI gates above
provide the full verification.
- A real-Git disk-capacity regression confirms a typed failure and
removal of the incomplete manifest. Repeated writer attempts cannot
exceed the permitted page count.

- Follow-up real Daytona and separate staging qualification passed with
the related archive validator (#14315) and exact-owner finalization fix
(#14314). Three successive turns copied back all 60,000 files with
39,828,890 filename bytes and five unusual names. Independent host
inventories verified every file and the pinned Git HEAD. Native,
provider, session, and process identities stayed fixed; no retry
remained. The task reached Done, and its browser-downloaded final proof
matched exactly. The reusable regression is #14316, including an
assertion of the effective environment idle policy.

## Risks

- SQLite manifests use disk space. Each receives one quarter of the
available capacity above the host reserve at creation. The reserve
defaults to 256 MiB and has a 64 MiB configuration minimum. Disk
capacity, filesystem quotas, per-path limits, Git resource use, and
execution deadlines remain limits.
- Each path and sink chunk has a 64 KiB limit. SQLite connections use a
1 MiB page cache. Invalid or incomplete records fail explicitly.
- Restore transport keeps fixed and configured archive exclusions. A
remotely created Git-ignored file can be transferred, but the host merge
excludes it through the manifest.
- Provider archive buffers, Git and tar memory, repository metadata,
legacy v1 arrays, and the separate referenced-source resolver retain
their own limits. Existing provider safety validators still buffer
textual tar listings: Daytona allows 32 MiB and Kubernetes allows 64
MiB. These separate transport limits can stop a sufficiently large
restore before merge. This change does not claim bounded total process
memory or unlimited transport size.
- New descriptors use v2. Existing v1 recovery remains supported; a
downgrade cannot read v2 descriptors.

## Model Used

OpenAI GPT-6 through Codex. The exact deployment ID and context limit
are not exposed in this run. The agent used code editing, terminal
execution, tests, and GitHub tools.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-28 08:40:36 -05:00
DottaandPaperclip bacc0e6a98 docs: remove automatic agent escalation from coordination skill (#14188)
## Thinking Path

> - Paperclip manages work for AI agents.
> - The coordination skill tells agents how to handle blocked work.
> - The skill directs blocked work to managers and other agents.
> - Those agents may lack the same access or authority.
> - These extra assignments delay the required human action.
> - This pull request removes automatic escalation advice.
> - Agents must identify the missing capability and use the correct
approval or human-input path.

## Linked Issues or Issue Description

**Issue type**

Incorrect information.

**Where is the issue?**

The critical rules in `skills/paperclip/SKILL.md` and blocker guidance
in `skills/paperclip/references/api-reference.md`.

**What's wrong?**

The skill tells agents to escalate through `chainOfCommand`, ask another
agent for help, and avoid human help. A manager title does not grant
permission to fix a connection or complete an administrator action.

**Suggested fix**

Remove blanket escalation and agent-first rules. Keep normal delegation
when the recipient has a concrete capability for a bounded task. Use
saved human-input interactions or existing connection and approval flows
for human-only actions.

Searches for open PRs with “escalation”, “chainOfCommand”, and “ask
another agent” found no duplicate skill change. Recovery-routing PRs
change server behavior, which is outside this change.

## What Changed

- Remove the chain-of-command escalation rule and both repeated
agent-first directives.
- Replace manager handoffs in the API reference with direct blocker
handling.
- Keep reporting fields, normal delegation, approval gates, and the ban
on bypassing permission denials.
- Keep the ban on cancelling cross-team tasks. Request a decision
instead of automatically assigning the task to a manager.

## Verification

- Final head `1483e82cc3fe10a7c910230b3779635d6d54c162`: Greptile 5/5,
no outstanding findings, all CI checks pass (optional Storybook jobs
skipped).

- Created a fresh worktree at `.worktrees/skill-blocker-guidance` from
the current master commit.
- Ran `git diff --check`: passed.
- Ran Node assertions against both documents: passed. Removed directives
are absent. Human-input and capability-based delegation guidance is
present.
- Checked that checkout conflict, approval, dependency, and normal
delegation instructions remain.
- Attempted `pnpm -r typecheck`, `pnpm test:run`, and `pnpm build`. None
could run because this environment has no `pnpm` executable.
- Refreshed both generated capability inventories and their derived
contract after skill heading positions changed. Both generator and
live-inventory checks pass. The eval and MCP baselines remain unchanged.
- Ran `node --test
packages/paperclip-runner/scripts/check-capability-inventory.test.mjs`:
all four tests pass.
- Ran `node
packages/paperclip-runner/scripts/check-capability-inventory.mjs` and
`node packages/paperclip-runner/scripts/generate-capability-contract.mjs
--check`: both pass.
- Added explicit requester routing for agent and human scope questions.
Focused Node assertions pass.

## Risks

- Agents can request human input earlier for actions that require human
authority.
- Existing runs or installed copies can keep old skill text until
refreshed.
- This change does not alter server recovery routing or permission
checks.

## Model Used

OpenAI Codex, with reasoning, tool use, and shell execution. The runtime
does not expose a verifiable exact model ID or context window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-28 08:37:26 -05:00
DottaandPaperclip 0f14d26123 fix(runtime): allow bounded large untracked workspace snapshots (#14194)
## Thinking Path

> - Paperclip manages AI agents and their work.
> - Remote runs need a snapshot of the task workspace before the agent
starts.
> - The snapshot lists untracked filenames through the shared Git scan
scheduler.
> - A generated directory with a few thousand long filenames can exceed
the 1 MiB output limit.
> - This stops setup and prevents the agent from continuing its task.
> - This change gives that listing a 32 MiB bound and keeps the explicit
file snapshot.
> - Normal generated trees can now pass setup, while larger snapshots
still fail at a finite limit.

## Linked Issues or Issue Description

Refs #11572 and #12214 for the existing bounded scan and ignore-scan
protections.

**What happened?**

An agent continuation failed during workspace setup with `Workspace Git
scan exceeded its output limit`. A real Git fixture reproduces the
untracked-file path: 5,000 long filenames in one generated directory
exceed its 1 MiB output limit.

**Expected behavior**

The workspace snapshot must support ordinary generated trees with
thousands of files. It must keep a finite output bound and select
explicit files before staging.

**Steps to reproduce**

1. Commit a base file in a Git repository.
2. Add 5,000 untracked files with long names in one new directory.
3. Call `readGitWorkspaceSnapshot` with the normal scan limits.
4. Observe the output-limit error before this change.

**Paperclip version or commit**

Base commit: `640dee1`.

**Deployment mode**

Remote sandbox execution from source.

## What Changed

- Increase the untracked-file snapshot output bound from 1 MiB to 32
MiB.
- Keep explicit file selection, the shared scheduler, the timeout, and
the other scan bounds.
- Test that 40,000 long filenames above the old 8 MiB bound reach the
snapshot. Reuse those files with deeper paths to prove that output above
32 MiB still fails.
- Test that files created after the snapshot, including an ignored
secret, stay out of the overlay archive.
- Check the workspace root identity and reject selected paths with
symlinked parent directories before upload.
- Test root replacement after path resolution, including root-level
selected files.
- Preserve existing workspace root aliases by capturing the resolved
root before snapshot selection. Test that later alias retargeting cannot
change the archive contents.
- Stop staging on permission and I/O errors; continue to allow missing
files.
- Test these failures and preserve selected symlink entries.
- Accept valid case-renamed directories by checking ancestor file types.
A modeled case-insensitive regression failed before this correction and
now passes.
- Give the 40,000-file fixture enough time to remove its files.
- Document the larger bound and staging behavior.

## Verification

- Red: the 5,000-file regression failed with `stdout maxBuffer length
exceeded` before the fix.
- A separate check through the real server scheduler reproduced
`workspace_git_scan_output_limit` on the original code. The revised code
selected all 5,000 files.
- The late-file regression failed against the first PR revision because
the archive contained `drafts/late.secret`. It passes with the final
explicit-file approach.
- The staging regressions failed before the review fix: a substituted
parent directory and permission/I/O errors were accepted. All three
cases now stop before upload.
- Green: 134 tests passed across `git-workspace-sync.test.ts` and
`sandbox-managed-runtime.test.ts` with Vitest 4.1.11. This includes
complete selection above 8 MiB and rejection above 32 MiB.
- `pnpm --filter @paperclipai/adapter-utils... typecheck` passed after
the revision.
- The module-boundary check and `git diff --check` passed.
- `pnpm -r typecheck` and `pnpm build` stopped in the Rust runner steps
because this environment has no `cargo` executable.
- The full `pnpm test:run` attempt ended with `SIGKILL` during the
general server suite. It did not finish. That full-suite result belongs
to the earlier revision. Fresh checks are required for this revision.

- The new regression fails at the old 8 MiB bound with `stdout maxBuffer
length exceeded`. All 134 focused tests pass with the 32 MiB change.
- The affected typechecks and module-boundary check pass. The full local
typecheck requires Cargo, which is absent in this environment.
- Final verification for `b43e9bc95e55382c6a9bfe200487c164770c8be8`: 54
successful checks/statuses and two skipped Storybook checks. No checks
remain pending or failed.
- The [CI
run](https://github.com/paperclipai/paperclip/actions/runs/36315569674)
passes on attempt 2. The first attempt had one unrelated preview-fixture
readiness timeout. That exact test passed locally; its CI shard passed
on the single rerun.
- [Greptile reports
5/5](https://github.com/paperclipai/paperclip/pull/14194#issuecomment-5852045501)
on this revision. All review threads are resolved.
- [Security review accepts the documented memory
tradeoff](https://github.com/paperclipai/paperclip/pull/14194#discussion_r4115149465)
for this finite mitigation. The separate streaming follow-up will remove
full-list buffering.
- This revision also passes affected local typechecks and the
module-boundary check. Full local typecheck/build stop because Cargo is
absent. The full local Vitest attempt was stopped after about 18 minutes
once all remote gates passed; it did not complete locally.

## Risks

- Each untracked-file scan can buffer up to 32 MiB instead of 1 MiB. The
scheduler still limits concurrent scans and execution time.
- Snapshots above 32 MiB still fail with the existing error. Tracked and
ignored-file scan bounds stay unchanged.
- A workspace that replaces a selected path’s parent with a symlink now
fails staging.
- Detailed logs from the reported host were unavailable. The exact
command that exceeded its limit on that host is unconfirmed.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, tool use, and code
execution. The runtime does not expose a more specific model build or
context window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub references)
- [x] My branch name describes the change and contains no internal
Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-27 06:42:19 -05:00
Devin FoleyandPaperclip 5ee9e751fb fix(runner): discover assigned tools when direct catalogs exceed limits (#14218)
Keep assigned app tools accessible when the combined Runner catalog exceeds
its operation or byte limits. Reserve task and completion tools, then expose
bounded discovery and call tools for large catalogs. Fetch oversized schemas
in reauthorized chunks without blocking later search results.

Retain task ownership, work-mode restrictions, pinned assignments, current
gateway authorization, approvals, and audit. Small catalogs stay direct.

Validation: 46 focused server tests, two Runner capacity tests, local
typecheck/build, 52 passing CI checks, and Greptile 5/5 with no open findings.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-27 00:22:16 -07:00
Devin FoleyandPaperclip b2e9e82f05 fix: stop remote Grok runs before continuing queued messages (#14100)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The execution service owns each run and saves messages sent while it
runs.
> - Interrupt must stop the current executor before it delivers those
messages.
> - Remote Grok commands did not register the host cancellation control.
> - A cancelled task run could still write Done and prevent queue
recovery.
> - This pull request connects remote cancellation and revokes cancelled
run writes.
> - Saved input can use the existing queue admission rules after
verified cleanup.

## Linked Issues or Issue Description

**What happened?**

Interrupting a queued message marked a remote Grok run cancelled before
its sandbox stopped. The old run could still post a reply and mark the
task Done. Its saved follow-up remained deferred behind execution
recovery.

**Expected behavior**

Stop revokes run write authority and waits for verified termination.
Saved messages remain durable and enter one successor through normal
admission after cleanup.

**Steps to reproduce**

1. Run a task with `grok_local` in a remote sandbox.
2. Send a follow-up and use Interrupt while the command runs.
3. Let the old command attempt a task status update after cancellation.
4. Observe the task disposition and the saved message queue.

**Paperclip version or commit**

The gap is present in master at `d3e0f0a238`.

**Deployment mode**

Authenticated server with a Daytona sandbox.

Related work: #14028 and #14046 handle bounded continuation. #13291
covers infrastructure interruption and verified remote cleanup. #13332
addresses atomic recovery holds. This change handles direct Grok
operator cancellation and stale task writes.

## What Changed

- Register remote Grok cancellation before preparation. Keep command
ownership until the host confirms sandbox termination.
- Reuse the sandbox cancellation boundary for the direct CLI invocation.
Reject fresh attempts after cancellation and preserve workspace restore
failure evidence.
- Reject writes from cancelled task JWTs and runs with a pending stop.
Preserve diagnostic reads and existing conversation error codes.
- Recheck run authority under a database lock before task updates and
interaction responses commit.
- Preserve authorized handoffs that stop their own run. Only the
server-issued stop receipt for that request permits the final task
update.
- Add tests for hung commands, unverified stops, early cancellation,
copy-back failures, late Done, late interaction responses, authorized
handoffs, exact lease receipts, and one queue successor across
concurrent restart sweeps.
- Document the cancellation and write-authority contract.

## Verification

- Targeted adapter, cancellation-boundary, authentication,
queued-message, interaction-service, and activity-route tests passed.
The expanded run passed 214 tests; one new test had an incomplete
fixture. After correcting the fixture, all 8 selected follow-up cases
passed.
- `pnpm -r typecheck`: passed on
`179c86caf1bf0d89914a503d46e24af7e4b8c557`.
- `pnpm build`: passed on the same commit.
- `pnpm test:run`: the general-server group completed with 13,521
passed, 99 skipped, and 18 failed tests. It then stopped, so the
remaining local groups did not run. Five Slack, email, and wake-batching
failures passed on focused reruns after correcting the local
environment. The remaining 13 failures reproduce as `EACCES` on rename
in unchanged skill-cache code on macOS. Two custom-image suite setup
hooks also failed to start embedded PostgreSQL after the machine
exhausted shared-memory slots; all 31 tests in that file passed on rerun
after the local resource issue was resolved. CI covers all test groups.
- CI: 53 checks passed and 2 were skipped on the latest commit,
including the aggregate verification gate. The last server shard passed
on its single rerun after a preview-server startup timeout. The affected
file also passed locally with 28 passed and 3 skipped.
- Greptile: 5/5 on the latest commit. Both review threads are resolved.
- No live deployment or staging task mutation has been performed.

## Risks

- Stopping the sandbox can prevent file copy-back. The result preserves
workspace restore failure evidence; termination does not imply restored
files.
- If provider termination fails, the adapter keeps ownership of its
outstanding command and does not acknowledge Stop.
- The write restriction now applies to ordinary cancelled tasks. Reads
remain allowed. Task and interaction checks add a shared run-row lock to
agent mutations. An exact server-issued receipt permits the task request
that stopped its own run to complete its handoff.
- Existing terminal tasks are not reopened automatically. An operator
must correct a historical late Done before its saved queue can continue.
- No schema migration or UI change.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, repository inspection, code
execution, and test tools. The precise backend revision and
context-window size are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` OR (b) described the issue in-PR following the relevant issue
template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-26 17:07:07 -07:00
DottaandCodie 01d9a12185 fix: make keyboard shortcut enablement a personal preference (#14141)
Store keyboard shortcut enablement per user and expose it in Profile settings.

Co-Authored-By: Codie <Codie@users.noreply.github.com>
2026-09-26 11:50:04 -05:00
Devin FoleyandPaperclip ffa32373bc fix(runtime): honor provider acquisition timeout defaults (#14097)
Declare provider acquisition budgets so slow Daytona creation does not hit the host’s 30-second fallback. Bound creation and setup to one deadline and preserve scoped cleanup ownership after timeout. Legacy drivers retain their original call shape.

Validated by 238 provider/manifest tests, focused database and heartbeat regressions, root and standalone provider typecheck/build, and full CI. Local broad tests also expose recorded Mac baseline limitations. Greptile 5/5.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-26 00:47:21 -07:00
Devin FoleyandPaperclip 4ca404b49a fix: record safe sandbox restore failure diagnostics (#14064)
Record a bounded diagnostic for failed workspace and staged-asset restores.
Preserve the original error, retry policy, and archive safety checks. Never
copy raw provider messages, credentials, paths, or asset names into the log.
Nested failures log once; safe fields survive throwing property getters.

Verified 129 focused restore/Claude tests, typecheck/build, and green full
PR CI. Greptile 5/5 with all review threads resolved.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-25 17:16:13 -07:00
DottaandPaperclip 96bf004a79 fix: use persisted state for lifecycle continuation and retry budgets (#13888)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Its control plane decides when a task can continue, wait, stop, or
complete.
> - Legacy continuation could change when an agent changed its wording
without changing task state.
> - Shared attempt counts also let repair and infrastructure retries
affect each other's limits.
> - This pull request uses persisted state and separate, bounded
allowances for these decisions.
> - If automatic repair stops, the task explains what happened and
offers a guarded retry.
> - Paired tests and real-provider evaluations verify that Stop,
approvals, ownership, and spending limits remain authoritative.

## Linked Issues or Issue Description

Related work: Refs #13761, Refs #11126, Refs #13610. These cover
obsolete continuation dispatch and retry storms. Open and closed issues
and PRs were searched for related lifecycle, continuation, and retry
work.

**What happened?**
Legacy continuation depended on English wording and progress heuristics.
Repair, failure retry, and productive continuation could consume shared
counts. When bounded repair stopped, the task showed a technical
recovery message without a clear next action.

**Expected behavior**
Persisted disposition and owned execution paths determine the next
action. Missing disposition prompts bounded agent repair. Explicit work
mode determines planning mode. Narrative changes and raw activity counts
cannot replenish allowances. An exhausted repair shows a readable
notice. An explicit retry checks current controls and preserves the
assigned agent.

**Steps to reproduce**
Run `pnpm test:lifecycle-baseline`. The paired probes keep structured
state constant while varying completion, planning, blocker, and progress
prose. Run the explicit `lifecycle-baseline` and
`continuation-accounting` Product E2E suites for real-provider coverage.
In Storybook, open **Design previews / Recovery notice** to inspect the
production component's normal, pending, acknowledged, unavailable,
failure, and mobile states.

## What Changed

- Hide the image attachment button, icon, and drop/paste hint in answer
composers. Image paste and drop support remains available.
- Merge current master and retain both browser regression sets. Use a
production-stamped service worker in the offline recovery browser
fixture.
- Share one state-based legacy continuation decision across immediate,
delayed, and recovered dispatch. Bind bounded repairs to their source
run and episode.
- Remove title and description wording from work-mode authority. Agents
can still write requested plans in execution mode.
- Persist separate failure-retry and productive-continuation counters.
Disposition repair and resource waits cannot consume or reset those
allowances.
- Validate delayed repair identity, then recheck current gates before
provider dispatch. Fence native startup cancellation.
- Show **Agent needs attention**, a plain-language explanation, **Retry
agent**, and expandable details in both task interfaces. Report request
progress, acknowledgement, and errors inline.
- Store typed recovery notice metadata. Recognize older active notices
only through exact stored action and run IDs. Notice text never grants
retry authority.
- Use the existing recovery-action endpoint for retry. Recheck current
action, status, owner, agent availability, dependencies, active runs,
pending questions and confirmations, approvals, pause controls, and
budget. Duplicate requests do not wake twice.
- Add component, page, route, database, contract, and Storybook
coverage. Keep the scenario inventory and executable evals here.
Historical reports and snapshots live in the [commit-pinned
paperclip-evals
archive](https://github.com/paperclipai/paperclip-evals/blob/ce3e5afcd4a1184650f586a2b5b8be5874c66c8b/experiments/2026-09-lifecycle-authority/README.md).
- Preserve unsaved project fields while the same project URL changes to
its canonical alias. Do not reuse data across projects or companies.
This separate fix addresses the repeated repository-editor browser
failure without changing the browser test.
- Keep the development service worker from intercepting Vite module
reloads. Update the connection-intent browser fixture to record progress
and completion through the agent API.

## Verification

Merge preparation on September 25, commit
`c1e8e4b7ddd9fbc4913ed55ce21b8e12906c2f97`:

- Merged master `bd2030932` and resolved the browser test-list conflict
by keeping both sets of regressions.
- Deterministic lifecycle baseline: 1,090/1,090 assertions passed; no
failures, skips, or missing selected evidence. Unit 423, runner 184,
database integration 397, grading 86.
- Browser support: 17/17 passed. The offline recovery test first failed
with an unstamped development worker, then passed with the production
stamp. Its assertions are unchanged.
- Focused interaction UI and offline fallback tests: 19/19 passed.
Verified the custom-answer composer in Storybook: no attachment controls
or hint; entering an answer enables Next.
- Recursive typecheck, production build, token gates, and diff checks
passed. The worktree is clean. No new real-provider campaign was run.
- Current CI and review: [Current PR CI
passed](https://github.com/paperclipai/paperclip/actions/runs/36166011243):
55 successful checks and two optional Storybook skips. Greptile scored
this exact commit 5/5. Hiding the question attachment controls is an
intentional UI change; paste/drop remains available.

Earlier recovery UI verification, commit
`21be0fec0e90e86b6d662b8ee4831847cd041cdb`:

- Recursive typecheck, production build, token gates, and diff checks
passed.
- Focused UI coverage: 338 tests passed across six suites (336 before
the interaction guard, with the two affected suites rerun at 149 passed
after it). Covers both task interfaces, the real page mutation,
pending/error acknowledgement, stale state, and unavailable controls.
- Recovery database integration: 352 tests passed before the interaction
guard. The complete recovery-action and mutation-route suites passed 181
tests after it. The two new pending question/confirmation regressions
failed before the fix and passed afterward, including
resolved-interaction controls. Shared validator suite: 31 passed. E2E
catalog suites: 34 passed.
- Browser inspection passed for light/dark themes, mobile layout,
expandable details, pending retry, acknowledgement, failure, and
disabled retry. Storybook renders the production component; its request
is simulated.
- The broad local run hit two chat callback-order wait failures and was
stopped after all CI unit/database/runner shards passed. Both local
failures passed when rerun without the competing full-suite process.
- CI exposed a repeated project-repository draft-loss race during
canonical redirects. A new unit regression failed before the fix; all
nine project-page tests now pass, including controls for other projects
and companies. Both unchanged repository browser tests passed against a
fresh local server. UI typecheck, production UI build, and token gates
passed after this fix.
- [Earlier PR CI
passed](https://github.com/paperclipai/paperclip/actions/runs/36072486798)
on `21be0fec0e90e86b6d662b8ee4831847cd041cdb`: 55 successful checks, two
optional Storybook skips, and no failed or pending checks. The
repository browser shard passed with the production fix. Greptile is 5/5
on this exact commit with no unresolved review threads. The PR is
mergeable.

Historical, source-qualified lifecycle evidence:

- Lifecycle baseline: 1,074 assertions. Native session coverage: 447
tests. Product E2E support: 515 tests. Browser support: 11 tests. Full
earlier verification is retained in the archive.
- [Real-provider campaign: 8/8 passed, zero
retries](https://d1p6rlowie26tp.cloudfront.net/runner-e2e/campaigns/gha-35881382080-1/index.html),
source `e88d210417280140b44a36449027290adcb1aeaa`. Evidence and cleanup
checks passed. This includes deliberately exhausted repair cases that
correctly remain blocked; it does not mean every task finished Done.
This campaign predates the recovery UI change.
- Archive migration verified all 16 original JSON files byte-for-byte
and all 24 checksum entries. App tests do not need private archive
access. [Archive PR
#27](https://github.com/paperclipai/paperclip-evals/pull/27) is merged.

## Risks

- Agents that omit durable disposition receive at most two repair
attempts by default. Prose-only completion exposes missing state rather
than silently changing scheduling.
- A retry is an explicit board action. The server rechecks current
controls. A successful response confirms the task returned to To do; it
does not claim that the provider has already started.
- Existing notice metadata remains valid. Only older active notices with
matching structured evidence receive the new UI. Historical notices
without that evidence keep their existing rendering. No schema migration
is required.
- Old run records require conservative retry accounting. Tests cover old
counters, alternating retry lanes, restarts, and exhausted repairs.
- Historical snapshots require private `paperclip-evals` access. The app
index retains public campaign links. Live campaigns qualify specific
sources and scenarios; no new real-provider campaign has run for the
recovery UI commit.

> This fixes existing lifecycle and recovery behavior and does not
duplicate planned core work.

## Model Used

OpenAI GPT-6 through Codex assisted implementation, reasoning, code
execution, and review. The exact serving model ID and context window are
not exposed in this task. Historical real-provider evaluations used
Codex model `gpt-5.6-sol`, separately from the implementation assistant.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change and contains no internal
Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-25 15:28:11 -07:00
Devin FoleyandPaperclip bd6caf51bb fix: preserve restore failure results and stop unsafe retries (#14035)
Preserve agent output and earlier execution errors when workspace restore fails. Report the restore phase and confirmed saved-plan links. Require verified repair before retrying unsafe archives, while preserving approval states and the retry budget.

Verified with full CI, 506 focused regression tests, and Greptile 5/5 with all review threads resolved.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-25 11:34:31 -07:00
Devin FoleyandPaperclip e2f1a66aa7 feat: support default-hidden experimental settings (#13980)
## Thinking Path

> - Paperclip is the open source control plane for AI-agent companies.
> - Operators can hide settings that their users must not change.
> - The server shares the effective restrictions with the UI and
settings API.
> - An explicit list must change whenever a new experimental flag is
added.
> - This pull request adds a wildcard with named exceptions to the
existing setting.
> - Core applies the policy to its current catalog, so new flags stay
hidden automatically.

## Linked Issues or Issue Description

Related: #11823 introduced settings visibility. #13907 added workspace
isolation visibility. I searched related PRs and issues and found no
duplicate wildcard implementation.

**What existing behavior does this improve?**

Operator control of experimental setting visibility through
`PAPERCLIP_HIDDEN_SETTINGS`.

**Subsystem affected**

Shared settings policy and its existing server health and mutation
consumers.

**Current behavior**

Operators must name every hidden experimental toggle. A new Core flag
can become visible until the operator updates that list.

**Proposed behavior**

`instance.experimental.*` hides current and future experimental toggles.
Entries such as `!instance.experimental.enableEnvironments` leave named
controls available. Explicit hidden keys and the hidden parent page take
precedence over exceptions.

**Reason and benefit**

Operators can maintain a short list of allowed controls instead of a
second copy of Core's full feature catalog.

**Breaking changes**

Existing explicit lists and unset configuration keep their behavior. The
new syntax is opt-in. Older images ignore it, so operators must retain
explicit restrictions until those images are upgraded. Visibility does
not change feature values.

## What Changed

- Expand the wildcard into concrete catalog keys in the shared parser.
- Limit exceptions to known experimental controls and preserve explicit
restrictions in either input order.
- Test a synthetic future catalog addition, duplicate and invalid
entries, API rejection, same-value echoes, and the effective health
payload.
- Document the syntax and the transition for deployments with mixed
image versions.

## Verification

- Targeted parser, future-catalog, health, and settings-route tests
pass: 95 tests across four files.
- `pnpm -r typecheck` passes, including Rust checks, with the installed
Cargo directory on PATH.
- `pnpm build` passes.
- All current-head CI gates pass, including the full test shards, Rust,
build, browser E2E, and canary dry run:
https://github.com/paperclipai/paperclip/actions/runs/36083292578. One
unchanged runtime-exposure cold-start test passed on its first retry.
- The full local `pnpm test:run` did not pass on macOS/Node 25: the
first server group reported 13,356 passed, 18 failed, and 99 skipped,
with six failed files (including two failed suite setups). Failures were
in unchanged runtime/company skill cache, chat/email connector fixtures,
embedded-Postgres setup, and workspace cleanup tests. A standalone
filesystem probe reproduced the read-only-directory rename permission
failure. Missing connector fixture paths, database startup failures, and
two integration assertions also occurred; the remaining local groups
were not reached after this group failed. The corresponding CI lanes all
pass. These local failures are not claimed as fixed by this PR.
- Browser suites were not run because this changes the shared policy,
not UI rendering or browser workflows. Health payload and route tests
cover the shared UI/API contract.

## Risks

A malformed exception remains hidden and is reported as unknown.
Exceptions cannot override an explicit hidden toggle or parent page.
Older images ignore wildcard syntax; keep their explicit list during a
mixed-version rollout. No schema or feature-value changes are included.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, tool use, and code
execution. The exact runtime variant and context-window size are not
exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-25 08:07:50 -07:00
DottaandPaperclip 1dbffb4c04 fix(daytona): clean up sandbox allocation after create failure (#13979)
## Thinking Path

> - Paperclip manages AI agents and their execution environments.
> - The Daytona provider creates sandboxes before it returns a lease.
> - Daytona can allocate a sandbox, then time out while waiting for it
to start.
> - The SDK throws without returning the allocated sandbox handle.
> - Paperclip previously lost the resource identity and could leave a
running sandbox behind.
> - This pull request keeps an exact creation identity and deletes a
matching failed allocation.

## Linked Issues or Issue Description

Related: #13882. Searches for Daytona create cleanup and orphan fixes
found no duplicate for this path.

**What happened?**

In [Grok qualification campaign
36080870743](https://github.com/paperclipai/paperclip/actions/runs/36080870743),
Daytona sandbox creation exceeded 300 seconds. No native runner or
provider session started. The SDK threw, but an ownership-filtered
provider lookup found the allocated sandbox still running. The
disposable resource was then deleted separately. The original attempt
and its failure remain retained.

**Expected behavior**

A failed create must retain enough identity to clean up an allocated
sandbox. Cleanup must never delete another attempt's resource. If the
provider cannot confirm cleanup during sandbox lease acquisition, the
host must retain a durable cleanup record and retry the exact owned
allocation after restart.

**Steps to reproduce**

1. Have Daytona allocate a sandbox for an environment acquisition.
2. Make the SDK throw while waiting for startup, before it returns the
sandbox handle.
3. Before this fix, acquisition fails without deleting the allocated
sandbox.
4. The regression tests reproduce this failure and verify exact-owner
deletion.

**Paperclip version or commit**

Observed at `1b0551bb7c8de3c54f4bee64dbe2c88328b3645e`. The same
creation path exists on master; this fix starts from `efce9356b`.

## What Changed

- Assign each cold create a unique provider name and creation-attempt
label.
- On create failure, look up that exact name and verify every ownership
label before deletion.
- Wait for provider deletion with bounded lookup and deletion calls.
- Preserve the original create error after successful cleanup. Report
both errors and the provider name when cleanup cannot be confirmed.
- Treat a missing lookup after an uncertain create as unconfirmed
cleanup: a delayed provider request might still create the sandbox.
- Transfer only validated ownership fields through the acquire-lease RPC
error; provider exceptions and arbitrary error data are not serialized.
- Persist a pending-cleanup lease before the host retries deletion.
Reuse the existing cleanup sweep and durable spool, retaining the
original environment scope after its row is deleted.
- Fence retries by company, environment, run, provider account, unique
creation name, and every ownership label. Missing provisional-name
lookups remain unresolved.
- Journal an ownership-verified provider ID before host-driven deletion.
Its absence then confirms cleanup after a lost deletion reply or final
database update; failed journal writes block deletion.
- Keep ownership labels separate from the mutable input Daytona modifies
during create.
- Report confirmed host-side deletion accurately while still rejecting
the failed acquisition.
- Add protocol, malformed-evidence, cross-scope denial,
controller-restart, and deleted-environment regressions alongside the
original bounded cleanup tests.

## Verification

- SDK suite: 92 passed. Daytona plugin suite: 277 passed; six opt-in
live tests skipped. Environment-runtime suite: 103 passed, then all four
focused observation/recovery variants passed after adding a
foreign-observation case. SDK and provider TypeScript checks and `git
diff --check` pass.
- Regressions failed before the respective fixes: missing durable
ownership, misleading successful-cleanup message, and SDK mutation of
the ownership labels.
- Controlled real-Daytona proof at
`d2ac1c95b32ca64daf039c0427137657f351c0e0`: create a real sandbox;
inject an SDK failure and a failed immediate lookup; persist the
validated ownership envelope; have a child journal the observed provider
ID before deleting; deliberately drop its successful deletion receipt;
reconcile absence from another fresh process and confirm it with a
separate provider read. Passed, with no manual cleanup and zero model
calls. The live proof uses an owner-only envelope file; actual host
database/spool recovery is tested separately in the environment-runtime
suite.
- The preceding controlled attempt failed because the real SDK mutated
the labels object. That failure is retained. The harness deleted its
exact owned sandbox, and a fresh lookup confirmed absence. The fix
copies the SDK input labels separately from the ownership snapshot.
- [Repository
CI](https://github.com/paperclipai/paperclip/actions/runs/36095925399)
passes on this exact head, with a clean 5/5 review. The unchanged Cursor
remote-command test passed its one bounded rerun after a 10-second
timeout; the same test had already passed on the combined tree. The
original failure is retained. Earlier `199f0852` CI and
immediate-deletion proof are retained, without being promoted to the new
source.
- Combined-source verification uses temporary PR #13990 against the Grok
feature branch. No Docker or Rust build runs on the developer laptop.

## Risks

Creation failures now add up to ten seconds for lookup and fifteen
seconds for deletion confirmation. The SDK still owns the initial
creation timeout. If a request materializes only after the failed
lookup, its durable pending record remains eligible for later cleanup; a
never-observed creation name is never reported deleted from a 404. A
previously observed provider ID can be reconciled as deleted. The host
and SDK must be deployed together. Durable handoff applies to
plugin-backed sandbox lease acquisition used by heartbeat and runner
login. Probe and custom-image interactive setup retain immediate cleanup
and explicit failure reporting, but do not use this lease-recovery path.
A worker crash before delivering the failure envelope still cannot be
recovered through this mechanism. A cleanup error never returns a lease.
Successful creation behavior is unchanged except for the provider name
and ownership label.

## Model Used

OpenAI GPT-6 through Codex, with repository tools and code execution.
The exact serving identifier and context-window size are not exposed in
this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-25 10:06:57 -05:00
DottaandPaperclip 8781f06a87 feat(connections): enable MCP aggregators by default (#13964)
## Thinking Path

> - Paperclip helps people manage AI agents for work.
> - Connections let those agents use external services with explicit
access rules.
> - Zapier, Arcade, Composio Connect, and Executor already have setup
and runtime support.
> - Their experimental switch still blocks discovery and setup by
default.
> - This pull request removes those gates and the Settings toggle.
> - Users can connect these providers without enabling an experiment.

## Linked Issues or Issue Description

Refs #13755. Refs #13941.

**What existing behavior does this improve?**
Apps browsing, inline setup, and agent connection search for the four
MCP aggregators.

**Current behavior**
An instance must enable the MCP aggregators experiment before users or
agents can start setup.

**Proposed behavior**
All four providers are available by default on local and managed
instances. Old stored and managed values still parse but cannot disable
them.

## What Changed

- Remove the aggregator gates from Apps, inline setup, server setup, and
agent search.
- Remove the Settings toggle and its UI hook.
- Retain the old setting key only for upgrade compatibility. Normalize
it to true and ignore managed overrides, as Apps already does.
- Replace opt-in fixtures with default-on coverage. Test old false
values, all four setup flows, provider choice, and the removed toggle.
- Update current connector guidance and remove the opt-in from the
runner acceptance fixture.

## Verification

- 306 focused tests passed across eight files: shared remote MCP
contracts; server remote MCP lifecycle, aggregator fallback, settings
normalization, and managed overlay; UI Apps browsing, setup, and
experimental settings.
- Server and UI TypeScript checks passed.
- UI token gates and `git diff --check` passed.
- The full local suite was not run, per the maintainer's instruction.
All 54 CI checks passed; two checks were skipped. One unrelated
workspace-preview readiness timeout passed on one failed-shard retry.
- The setup fixtures use simulated MCP responses. This change does not
claim new live provider acceptance.

## Risks

- Existing instances now show all four providers, even if the old flag
was false. This is intentional.
- External provider choice, credentials, company isolation, agent
grants, and tool policies still apply. Showing a connector does not
authorize an external account.
- No data migration is required. The compatibility key keeps old managed
configuration documents valid.
- Historical Zapier live acceptance remains incomplete in the existing
evidence report. The maintainer explicitly requested the default-on
rollout for all four existing providers; the report records that scoped
exception.

## Model Used

OpenAI GPT-6 (`gpt-6-astra`) through Codex, with reasoning, repository
tools, and test execution. The context window size is not exposed in
this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-24 17:31:32 -05:00
DottaandPaperclip aa8fc86331 feat(connections): prefer native apps and ask users to choose external providers (#13941)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Connections give agents governed access to external services.
> - Native connections should remain the first choice for a supported
app.
> - Other apps may be available through an external MCP provider.
> - The user must know which external provider handles the connection
and choose it before setup.
> - This pull request adds ranked alternatives and server-authored
instructions to connection search.
> - Agents can follow the returned instructions while Paperclip
validates saved choices and access.

## Linked Issues or Issue Description

Related: #13879, which fixed inline MCP provider setup. This PR adds
discovery and provider selection on top of that work.

**Subsystem affected**

Cross-cutting: shared connection contracts, server search and intent
services, native runtime, CLI, inline setup UI, and evals.

**Problem or motivation**

An agent cannot offer a clear external-provider choice when Paperclip
has no native connection for an app. Adding provider-specific branches
to the core prompt would make those instructions harder to maintain.

**Proposed solution**

Prefer a native connection. Otherwise return verified alternatives in
Composio, Arcade, Executor, Zapier order. Include an external-service
disclosure, a question with None, and the next instruction in the search
result. Validate the saved human choice before creating a selected
fallback setup card. Reuse existing provider accounts and verify
underlying app access separately.

**Alternatives considered**

Do not silently choose a provider. Do not claim that broad execution
tools prove support for every app. Reuse existing questions and
connection intents rather than add another connection model.

**Roadmap alignment**

Extends the existing MCP Tool Gateway & Apps and Agent evals & feedback
capabilities. The MCP aggregators experiment remains the gate. No
duplicate provider-routing PR was found in the public search.

## What Changed

- Add a dated support index and authorized cached-tool evidence for
external routes.
- Return provider questions and next-step instructions from
`connections_search`.
- Preserve pending choices and declines across continuation. Validate
company, task, agent, human, app, and current route eligibility.
- Carry the selected app into new setup and account reuse, validate
explicit provider requests against persisted human messages, and
distinguish provider readiness from app authorization.
- Sync native, MCP, REST, and CLI contracts. Keep core agent
instructions provider-neutral.
- Add production-component Storybooks, focused database tests, and three
real-agent browser eval cases.
- Record the plan, observed failures, fixes, passing evidence, and
acceptance limits.

## Verification

- Latest head `586f0e6cd`: 54 checks passed, 2 skipped; Greptile 5/5 and
all review threads resolved.

- After rebasing on master `18dac1e1e`: 64 focused shared, validator,
route-contract, and database tests passed; server typecheck passed.
- Embedded-browser test drive on the rebased head: native Jira card,
HubSpot external-provider question, Arcade account reuse, one actual MCP
read against a local synthetic fixture, reload persistence, and None
preventing further calls. A real OpenAI-backed agent performed discovery
and continuation.
- UX observation: the agent initially combined mutually exclusive
request fields; the server rejected it and the agent recovered without
changing access. This extra retry remains visible in the transcript.
- After rebase: 23 focused eval grader/catalog tests, affected
TypeScript checks, token gates, production UI build, and Storybook build
passed. Full local tests are intentionally excluded at the maintainer's
request.
- Before rebase: four browser/real-agent attempts passed: native Jira,
None, and reuse of the second provider on two Codex profiles.
- Browser evals used an isolated deterministic MCP fixture through the
real Paperclip gateway. They do not prove production compatibility with
all four providers.
- Review `Apps / Connections / Provider choice` in Storybook. Choose
Arcade, continue through Access, and verify the app name,
external-service disclosure, and URL configuration.
- The detailed verification report is
`doc/connections/2026-09-23-aggregator-routing-verification.md`.

## Risks

- The public support index is finite and can age. Account capability and
app authorization still require verification after selection.
- Existing installed-tool permissions remain in effect. Provider choice
is not a new execution permission boundary. An early Mini attempt
skipped search; clearer provider-neutral instructions made the targeted
rerun pass. This is not a measured reliability rate.
- Explicit requests skip provider confirmation only when a clear
persisted human message or saved provider choice supports them. Other
phrasing falls back to confirmation; the agent query alone is not
consent. These routes do not add tool permissions.
- No database migration or legacy Composio broker is added.
Real-provider acceptance remains separate from fixture proof.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, repository tools, code
execution, and browser tools. The exact deployment variant and
context-window size are not exposed in this session. Product evals
separately used the repository's primary Codex and Codex Mini profiles;
those agents supplied test behavior, not independent provider
compatibility proof.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-24 16:36:49 -05:00
DottaandPaperclip 18dac1e1ef feat(connections): add experimental memory providers and remote MCP access (#13942)
## Thinking Path

> - Paperclip manages AI agents and their work.
> - Connections give agents governed access to external tools.
> - Agents need durable memory across tasks and execution environments.
> - Mem0, Zep, Supermemory, Cognee, and Honcho provide hosted memory
tools.
> - This pull request adds their setup flows behind an experimental
toggle.
> - It also delivers assigned MCP tools through the native remote Codex
runner.
> - Operators can connect a provider once and use the same governed
tools locally or in Daytona.

## Linked Issues or Issue Description

**Problem or motivation**

The Apps catalog lacks a complete set of memory providers. Remote native
Codex agents also need access to assigned managed MCP tools without
receiving provider credentials.

**Proposed solution**

Add five memory connectors behind the disabled-by-default Experimental
memory connectors setting. Use the existing connection setup and
permissions UI. Default their tools to Allowed. Preserve company
boundaries, operator permission changes, provider scopes, and audit
attribution.

**Alternatives considered**

Direct provider credentials in each sandbox would duplicate setup and
bypass the managed gateway. The remote runner instead uses its existing
protocol channel to call the gateway on the server.

**Roadmap alignment**

This maintainer-requested experiment supports the Memory / Knowledge and
Connected Apps roadmap areas. It adds provider connections without
introducing a separate memory UI. Related connector authoring
documentation is tracked in #13692; no duplicate memory-provider
implementation was found.

## What Changed

- Add provider definitions, official branding, and the experimental
setting for all five providers.
- Use OAuth for Zep and Supermemory, API credentials for Mem0 and
Honcho, and a bundled Cloud API bridge for Cognee with no runtime
downloads or subprocesses.
- Default memory tools to Allowed and classify destructive actions
explicitly.
- Fix personal remote credential resolution and propagate provider tool
errors.
- Relay assigned managed MCP tools to remote native Codex through the
runner protocol. Recheck current authority for each call and rotate
stale tool contracts.
- Add 21 Storybook states and complete OAuth walkthrough fixtures.
- Document provider research, sanitized tool inventory, and live local
and Daytona proof.

## Verification

- Passed workspace typecheck: `pnpm -r typecheck`.
- Passed production build: `pnpm build`.
- Full local `pnpm test:run`: 13,273 passed, with failures from
process/readiness timeouts under parallel load. Reran all 16 affected
suites with one worker: 456 passed, leaving two macOS `/var` versus
`/private/var` path assertions. Both passed with `TMPDIR=/private/tmp`.
No test failures remain unverified. Latest-head remote CI passes all 54
checks (two optional Storybook jobs skipped). Greptile is 5/5 with no
unresolved findings.
- Latest Cognee gateway regression: 71 passed, including public
deployment without a runtime host and immediate recovery after a
provider error. Bundled bridge tests: 25 passed.
- Browser setup and real agent tasks exercised all five providers. Mem0,
Cognee, Zep, and Honcho have successful store/retrieve proof.
- Supermemory now has scoped read/write consent. Local storage and real
Daytona write, document read, and semantic recall passed; indexing
completion was verified before claiming success.
- All five providers were exercised through a real Daytona sandbox and
its native runner MCP relay. Provider credentials remained on the
server. The final bundled Cognee bridge also passed a fresh Daytona
store/recall run. All disposable sandboxes were removed and verified
absent after testing.
- Storybook is rebuilt and contains the experimental toggle, catalog,
setup, permissions, and error states. The Zep and Supermemory access
steps advance correctly.

## Risks

- Provider OAuth scopes and plan limits remain independent of Paperclip
tool permissions. An Allowed tool can still be rejected by the provider.
- Providers can queue memory indexing; save acceptance does not prove
that semantic recall is ready.
- Remote tool contracts must stay synchronized with current connection
authority. Regression tests cover revocation and stale contracts.
- This change has no database migration. Existing connections remain
usable when the experimental catalog toggle is disabled.

## Model Used

OpenAI Codex, GPT-6 Astra (`gpt-6-astra`), with reasoning, repository
edits, code execution, and browser automation. The exact context window
size is not exposed in this session. Live acceptance agents used
`gpt-5.6-sol`.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-24 15:54:38 -05:00
e006c18f20 test(paperclip-runner): stabilize the assigned-skills ACPX runtime host test (#13453)
Release sealed skill homes before test cleanup and reuse one prepared sandbox across the assigned-skills test opens. Preserve the current skill-refresh and prompt assertions without increasing test timeouts.

Co-Authored-By: Devin Foley <devinfoley@users.noreply.github.com>
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-24 11:11:02 -07:00
Devin FoleyandPaperclip f3a214fe77 Fix relative symlinks in secondary sandbox repositories (#13953)
## Thinking Path

> - Paperclip manages agents and their task workspaces.
> - A task can use several independent Git repositories.
> - Sandbox staging copies secondary repositories from temporary clones.
> - The copy changed relative symlinks into absolute host paths.
> - Those links broke skill discovery and made workspace restore fail.
> - This change preserves link targets while keeping extraction checks
intact.

## Linked Issues or Issue Description

**What happened?**

Staging a secondary repository rewrites a link such as
`.claude/skills/demo -> ../../skills/demo` to an absolute path in a
temporary Git clone. That clone is then removed. The link is broken in
the sandbox, and Daytona refuses the outbound archive during workspace
restore. An agent can finish its turn but still have its run fail during
restore.

**Expected behavior**

Repository links keep their original targets after staging. Links within
a repository remain usable, and changes return to the local checkout.
Unsafe outbound archive links still fail before extraction.

**Steps to reproduce**

1. Create a project with a primary repository and a secondary
repository.
2. Commit a relative skill directory link in the secondary repository.
3. Stage the workspace for sandbox execution and inspect the copied
link.
4. Restore that repository through Daytona. Before this fix, the link
points at a removed host temporary directory and restore rejects it.

**Paperclip version/commit**

Reproduced on `0f8750627f11d855552abce9a837d7f3b67c9ddf` in the
multi-repository sandbox path.

Related: #13442 introduced multi-repository provisioning. #13882 adds
native Grok but keeps legacy adapters; #12991 addresses Grok instruction
isolation and leaves skill staging unchanged. Searches of open/closed
PRs and open issues found no direct fix for this copy behavior.

## What Changed

- Set `verbatimSymlinks: true` when copying secondary Git clones. This
[Node
option](https://nodejs.org/api/fs.html#fspromisescpsrc-dest-options)
preserves the stored link target instead of resolving it against the
temporary source.
- Test directory, file, chained and dangling links after temporary-clone
cleanup. Assert the copied Git checkout remains clean.
- Cover skill-link reads, edits and restore in fresh, warm-adoption and
durable-seed workspace modes.
- Extend Daytona checks for valid relative directory links and rejected
absolute targets.
- Document the staging behavior.

## Verification

- Four regression cases fail without the source fix: one clone test and
three staging modes.
- `pnpm exec vitest run
packages/adapter-utils/src/git-workspace-sync.test.ts
packages/adapter-utils/src/sandbox-managed-runtime.test.ts
packages/plugins/sandbox-providers/daytona/src/plugin.test.ts`: 301
passed.
- `pnpm -r typecheck` and `pnpm build`: passed.
- `pnpm test:run` was started locally, then stopped after the full Linux
CI suite passed. It did not finish locally; this is not a full
local-suite pass.
- Full PR CI: 53 checks passed, two conditional skips, on
`07b30ff298baab327a4e60708ade899935688a3f`. Three server shards were
interrupted by runner shutdowns; the unchanged mobile repository test
timed out waiting for a disabled Save changes button. One same-commit
failed-job rerun passed. Original attempts remain in [run
36036538369](https://github.com/paperclipai/paperclip/actions/runs/36036538369).
- Greptile: 5/5 on the same head, no review threads or actionable
findings.
- Diff scanned for secrets and private identifiers; no matches.

## Risks

Low risk: the production change is one copy option. It preserves
symlinks instead of following or materializing their targets. Daytona
extraction guards, workspace exclusions, authentication and database
behavior do not change.

This prevents corruption in newly staged snapshots. It does not rewrite
an already corrupted warm workspace or durable seed; those need fresh
staging from the source checkout. No live provider run or customer-task
replay was performed. The tests use real Git, filesystem and tar
operations with mocked provider transport.

## Model Used

OpenAI GPT-6 through Codex, with tool use and code execution. The exact
serving model identifier and context-window size are not exposed in this
session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-24 10:58:49 -07:00
Devin FoleyandPaperclip 0f8750627f fix(codex): preserve typed ACP quota classification and reset time (#13945)
## Thinking Path

> - Paperclip runs agents and recovers failed tasks.
> - Codex ACP can report usage exhaustion as a typed terminal failure.
> - The shared engine removes provider text before it stores the result.
> - Codex did not use the existing terminal classifier hook, so a quota
failure became a generic turn failure.
> - This change classifies explicit usage exhaustion before that text is
removed.
> - Recovery can then use quota backoff and the supported reset clock.

## Linked Issues or Issue Description

**What happened?**

A Codex ACP `limit` failure with explicit usage-exhaustion text produced
`acpx_turn_failed`. Recovery could schedule the ordinary short retries
because the quota classification and reset time were lost.

**What did you expect to happen?**

Keep the failure visible and use the existing provider-quota wait.
Preserve a supported reset timestamp without storing provider text.

**Steps to reproduce**

Return a terminal ACP session failure with category `limit` and title
`You've hit your usage limit for GPT-5. Switch to another model now, or
try again at 4:30 PM (America/Chicago).` The real child-process
regression tests exercise both pinned ACPX versions in persistent and
oneshot modes.

**Paperclip version**

Base commit: `32573876d4`.

Related work: #13651 and #13831 provide the shared hook and Claude
classification. #11854 includes quota handling as part of optional
credential rotation, but reads the already-sanitized result; this patch
handles the typed terminal boundary without adding rotation. #13549
reads recovery text after this boundary and cannot recover discarded
provider text. #9011 concerns the Codex CLI backoff. This change leaves
those other mechanisms in place.

## What Changed

- Register a Codex terminal-failure classifier with the existing ACP
engine hook.
- Recognize explicit usage exhaustion only in a typed `limit` failure.
- Reuse the Codex reset-time parser and existing provider-quota recovery
fields.
- Leave context, turn, rate, budget, storage-capacity, and unknown
failures on their existing paths.
- Test real ACP children, both dependency patches, privacy, and recovery
classification. Document the boundary.

## Verification

- 88 focused tests passed across Codex ACP, parsing, and server recovery
classification.
- An initial cross-adapter run passed 53 tests, including the existing
Claude quota suite.
- Removing only the classifier registration makes five new integration
tests fail; restoring it passes all 19 new tests.
- `pnpm -r typecheck` and `pnpm build` passed.
- Full Linux CI passed on `b10d60e002`, including all unit/integration
shards, browser shards, typecheck/build, runner checks, and
release/package gates.
- The duplicate local `pnpm test:run` reported three skill-cache
failures and two runner-suite failures. It is not claimed as a full
local pass.
- The three skill-cache failures reproduce in a clean worktree at the
unchanged base commit (3 failed, 107 passed, 3 skipped across the skills
and runner files). The cache rename reports `EACCES` on macOS.
- An isolated runner-suite run reports two embedded PostgreSQL startup
failures before its assertions (37 tests pass). No runner source is
changed; the Linux CI runner and server suites passed.
- Greptile reviewed the current head at 5/5 with no actionable findings
or unresolved threads.

## Risks

- Explicit usage-exhaustion failures now wait for quota recovery instead
of short generic retries.
- Unknown wording retains the existing behavior. The generic historical
terminal-limit message alone cannot establish quota exhaustion.
- Reset parsing keeps the existing Codex clock formats. A missing or
unsupported reset uses the existing quota backoff.
- No schema, credential, UI, dependency, or deployment changes. Provider
text stays in memory and is absent from results and logs.

## Model Used

OpenAI GPT-6 via Codex. Exact runtime model variant and context-window
size were not exposed. Used reasoning, repository inspection, editing,
and local tests.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-24 10:03:19 -07:00