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Author SHA1 Message Date
DottaandPaperclip 5a9e6b6315 fix(grok): avoid false file recovery after Stop (#16427)
## Thinking Path

> - Paperclip lets people manage AI agents and their work.
> - Grok Bot uses a managed Runner and a fixed external work session.
> - Its admitted contract gives it no access to Paperclip workspace
files.
> - The Runner still has a sync descriptor to support durable recovery.
> - Cancellation treated that descriptor as proof that files needed
repair.
> - This pull request uses the admitted access contract while preserving
ownership settlement.
> - Users get the correct recovery action after Stop, with native file
safeguards intact.

## Linked Issues or Issue Description

Refs #16219 and #16422. The duplicate search found no open Grok
workspace correction.

**What happened?**

A real Grok Stop test cancelled its run, fenced its assignment, denied a
stale progress update and cleaned up the sandbox. Paperclip also created
a file-repair hold. The recovery panel told the user to recover
workspace files, although the admitted external contract has workspace
access set to none.

**Expected behavior**

Keep the stopped session fenced and require inspection before new work.
Keep failed-run ownership settlement. Do not invent a file export
obligation for a session that cannot access the workspace. Native
sessions with writable or unknown workspace access must keep their file
safeguards.

**Steps to reproduce**

1. Connect a Grok Bot and assign a task.
2. Let it accept the task and save a Paperclip checkpoint document.
3. Use Stop while it is working.
4. Inspect the task recovery panel. It asks for file repair after
sandbox cleanup succeeds.

**Paperclip version or commit**

Observed on Core 11d69d04c7 through the
actual Grok client. Reproduced against master with database-backed
regressions.

## What Changed

- Match the admitted native input to its run, company, agent, task and
external driver before treating workspace access as disabled.
- Keep coordinator ownership checks and failure settlement. Skip file
retention and the false file-repair obligation for that exact contract.
- Add inspection-only settlement for old Grok file holds through Runtime
recovery. Verify exact run ownership, fenced assignments, terminal
coordinators and managed lease stop receipts. Archive the false file
evidence and preserve no-replay.
- Keep historical Dot recovery controls. Do not claim global
external-provider termination.
- Fix the later dispatch-failure owner so it cannot retain a
no-workspace external sandbox for a false file obligation.
- Cover both Grok and Dot, mismatched access evidence, native file
recovery and the assembled heartbeat cleanup path.
- Update the Grok guide and the existing release evidence plan.

## Verification

- Four database regressions fail before the correction.
- 68 file-recovery and cancellation checks pass. Grok, Dot and the
shared recovery notice pass 98 checks. The assembled heartbeat selection
passes both cases; 404 unrelated cases were not selected in that local
command.
- The lifecycle regression caught an unsafe early-return prototype. The
final code keeps coordinator settlement for both workspace cases. A
separate assertion was corrected for the run-state projection's explicit
nulls. The failed attempts remain in the private evidence record.
- Repository typecheck and build, token gates and Storybook build pass.
The branch was rebased from ea4aa185b0
onto 7420af26fc, whose additional change
affects CI profile exports. The core recovery checks are repeated after
rebase.
- On the earlier deployed source, a real 824-second task survived an
actual same-image controller restart with its original run, assignment,
process and lease. It completed canonically and cleaned up without an
extra wake. The active Stop test denied a real stale update and
completed connection inspection and authenticated re-verification. These
results establish the observed baseline and defect; they do not qualify
this patch's deployed behavior.
- Review found two valid gaps: the old file obligation still blocked
fresh input, and dispatch failure could request retention earlier. Both
are corrected. The follow-up passes 128 focused tests and server
typecheck. The recovery test proves fresh user continuation after
inspection, authenticated re-verification, and managed Runner cleanup
while the old assignment stays fenced.
- A second review found a partial-transaction gap. Routine readiness now
commits as invalid before task holds retire. All 43 Grok routine tests
pass, including a held task lock and an unrelated active assignment.
- Repository typecheck and build pass after the first review
corrections; final server typecheck also passes. The full local suite is
still running and is not claimed as passed. The first follow-up CI timed
out at 15 seconds in one unchanged run-history case; all 91 cases pass
locally. The cause is unproven.
- The final head, 33e4361911, passes 54
checks plus one successful status context. Two optional Storybook jobs
are skipped. Greptile reviewed that exact head at 5/5 with no unresolved
threads. All source CI suites pass on this final head without retry. The
earlier runner-shutdown and timeout attempts remain recorded.
- An actual deployed historical recovery and fresh Stop repeat are still
required.

## Risks

An incomplete or mismatched contract must retain file safeguards. The
change uses stored admission evidence rather than current agent
configuration. Historical records stay auditable and do not gain
automatic replay or a generic Retry action. Operator inspection and a
fresh authenticated verification remain required before new Grok work.
Global Grok termination remains unconfirmed. No schema migration is
needed.

## Model Used

OpenAI GPT-6 in Codex, with reasoning, repository editing, shell tools
and computer use. The exact serving model ID, snapshot and context
window are not exposed by this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-15 08:52:50 -05:00
DottaandPaperclip 57fa6b358d fix(observability): separate workspace finalization and copyback spans (#16428)
Give native workspace finalization its own span name. Keep copyback and commit as separate child measurements, with an exported-span regression that preserves the workspace operation result.

Validation: 40 runtime/tracing tests and server typecheck passed locally. Final-head CI, E2E and security checks passed. Apex review: 5/5, zero findings and no unresolved threads.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-15 08:35:02 -05:00
Devin FoleyandPaperclip 79c34058cd fix(native): retain unexported workspaces after execution failure (#16397)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Native agents can edit files in a remote sandbox before they submit
a result.
> - A process identity or startup failure can end the run before file
export.
> - Cleanup can then delete the sandbox and its unpublished files.
> - This pull request retains the exact source and records a file repair
action before cleanup.
> - Operators can recover the files without replaying the failed turn or
changing the task owner.

## Linked Issues or Issue Description

**What happened?**
A native remote process had completed local edits when process identity
recovery failed. The run still had a prepared workspace reference and no
accepted result. Cleanup deleted the source sandbox. No file recovery
card appeared. A restarted run can hit the same path during setup,
before the native executor starts.

**Expected behavior**
Retain the exact unexported source. Show the existing file recovery
card. Require source stop and file recovery evidence. Keep task
ownership, status, and external action reconciliation separate from file
repair.

**Steps to reproduce**
1. Run a native agent in a remote ephemeral workspace and make
unpublished edits.
2. Fail process identity recovery before result acceptance or file
export.
3. Allow failure handling and lease cleanup to run.
4. Before this change, cleanup can destroy the source without a file
repair action.

Refs: #16341 for related process identity diagnostics. Refs: #16349 for
startup ownership fencing. This change addresses file retention after
failure.

## What Changed

- Record source retention and a file recovery action in the terminal
native failure transaction.
- Cover restarted preparation failures before the terminal setup writer
and cleanup run.
- Require the exact company, run, lease, provider allocation, and
workspace binding. Require the exact live recovery claim to settle an
owned preparation failure. Refuse stale or competing claims.
- Reuse the existing stop-only cleanup and file-only reconciliation
path. Leave accepted results and scheduled same-run recovery on their
existing paths.
- Document the retention rule and add database and runtime boundary
regressions.

## Verification

- All 1,242 tests passed across the full heartbeat recovery suite,
native executor, native source retention, runtime teardown, run
completion, and legacy file recovery.
- The integrated missing-descriptor regression fails before the
inner-handler fix and passes after it. The runtime retention and owned
restart regressions also reproduce their prior failures.
- The tests cover exact source identity, current and stale claims,
atomic rollback, cancellation, idempotence, and file-only repair on a
completed task.
- `pnpm -r typecheck` passed on the final code.
- `pnpm build` passed on the final code.
- Full repository CI passed on
`3945eb2ba5c228c5d4992da02b765dcf2e634cb8`: 54 successful checks and two
skipped Storybook checks.
- Apex scored 5/5 on that exact commit. Both earlier findings are fixed
and all review threads are resolved.
- The unsharded local `pnpm test:run` is still in progress. It is not
counted as a local full-suite pass; complete suite coverage is verified
in CI.

## Risks

- Failed runs can retain a sandbox that needs operator cleanup after
file recovery. This uses the existing retention policy and recovery
controls.
- This does not recover files from allocations that were already
deleted.
- No schema migration, UI change, or telemetry change is required.

## Model Used

- OpenAI GPT-6 through Codex. Tool use, code execution, and reasoning
assisted this change. The environment identifies the model as GPT-6; it
does not expose a more specific serving snapshot or context window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-14 23:07:15 -07:00
cafa25029c fix(native-runtime): recover unclaimed remote startup (#16349)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The native runtime preserves task execution across server restarts.
> - Remote workspace preparation can finish before the executor claims
its first provider attempt.
> - The recovery classifier required a provider checkpoint even when the
durable coordinator proved that execution had never started.
> - A deployment during this interval therefore left safe startup work
on a permanent recovery hold.
> - This pull request admits that narrow startup state to the existing
same-run bootstrap path. Existing execution and ownership checks remain
in force.
> - The original preparation yields when recovery owns the coordinator.
It cannot fail or clean up the recovered run.
> - Tasks can continue after this interruption without an operator retry
or a duplicate provider turn.

## Linked Issues or Issue Description

**What happened?**

A server deployment interrupted a prepared remote workspace before the
native executor's first claim. The coordinator had attempt zero,
controller generation zero, and no owner, process, provider event, or
checkpoint. Restart classification returned
`ambiguous_remote_recovery_evidence` and blocked the task.

**Expected behavior**

The server should recognize this durable never-claimed state and
continue the original run through normal execution admission. A prior
claim, uncertain ownership, or contradictory execution evidence must
retain the recovery hold.

**Steps to reproduce**

1. Prepare a remote workspace for a native run.
2. Stop the controller before the executor commits its first claim.
3. Restart the controller and classify the running native task.
4. Observe that the old classifier blocks it because no provider
checkpoint exists.

Related: #16341 preserves remote recovery failure reasons. #16344
strengthens remote restart qualification. Neither changes admission for
an untouched remote startup.

## What Changed

- Require a server-owned fencing version written only with fresh native
identities. Older unmarked preparations stay held during rolling
upgrades; caller profile data cannot add that marker to an existing run.
- Leave the current server's active preparation with its existing
execution.
- Yield through the controller-detachment path when a different
execution owns the coordinator lease. Lease expiry does not grant
takeover authority.
- Preserve run-scoped gateway tokens during detachment so stale
preparation cannot revoke the recovered worker's tools.
- Admit a valid prepared remote workspace only when the locked
coordinator proves attempt and controller generation zero, no owner, and
no prior session or execution evidence.
- Check launch receipts and provider source events before granting
bootstrap recovery.
- Keep the original run and session. Preserve atomic recovery claims,
executor durable-state checks, and normal admission gates.
- Add real PostgreSQL regression tests for competing controllers and
seven contradictory evidence cases.
- Update recovery documentation, the run-log reason, and both capability
maps.

## Verification

- The competing-controller regressions failed before the ownership fix
and pass for both live and expired foreign leases.
- On the final revision, 77 runtime-selection, restart recovery, real
PostgreSQL, and heartbeat boundary tests pass with no skips, including
all local runner process fixtures. The full native executor file passes
all 698 tests.
- Another 91 live-run route tests pass locally. An earlier CI timeout in
that unrelated file passed on retry; the complete final-head CI passed
without that failure.
- `pnpm -r typecheck`, `pnpm build`, `node scripts/check-maps.mjs`, and
`git diff --check`: passed locally. The map check verifies structure
only.
- Local `pnpm test:run` did not finish: an early attempt had
build-related collection failures, and later full-suite execution was
stopped after complete CI passed. Targeted suites passed after build
preparation. This is not a local full-suite pass.
- The complete [PR
workflow](https://github.com/paperclipai/paperclip/actions/runs/38669996667)
passed on `2baffb3652bfeb4705a30ca3706fbda6c3d72aa4`, including all test
shards, build/typecheck, runner verification, and browser E2E. All 55
applicable review/security/CI checks succeeded; two Storybook checks
were skipped.
- [Greptile
Apex](https://github.com/paperclipai/paperclip/pull/16349#issuecomment-6180848957):
5/5 on the same final head, with no unresolved findings.
- No live remote provider restart is claimed by the database regression.

## Risks

- A bare executor can no longer take a foreign coordinator lease after
expiry. A verified recovery claim must transfer authority first.
- Existing preparations without the server-owned fencing marker retain
their recovery hold during rolling upgrades.
- Incorrect admission could duplicate provider work. This path requires
a positive durable never-claimed receipt, rejects contradictory launch
evidence, and keeps the executor's existing durable-root verification.
- Previously claimed or incomplete remote recovery evidence remains
blocked. This change does not clear historical terminal holds.
- No schema, API, dependency, or UI changes.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, tool use, code execution,
and browser inspection. The exact serving snapshot ID and context window
size are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Devin Foley <devin@paperclip.ing>
2026-10-14 19:32:39 -07:00
DottaandPaperclip f329b24ee1 feat: give tasks durable project-optional workspaces (#15749)
Give tasks durable company-scoped workspace bindings independent of project assignment, channel defaults and authorized repository preparation. Reuse verified input seeds and sparse output recovery while preserving trust, privacy and controller provisioning boundaries.

Full CI and E2E, Superagent, legacy checks and Greptile Apex 5/5 passed on reviewed head 753680b61c. All review findings are resolved; the PR records focused verification and historical acceptance limits.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-12 20:45:18 -05:00
DottaandPaperclip 1fb3f9746e refactor(heartbeat): extract prepared runtime execution (#15803)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Heartbeat prepares, dispatches, and completes each agent run.
> - After the runtime-selection extraction, the main service still had
7,295 lines.
> - Provider dispatch and workspace finalization formed one large block
with shared cleanup rules.
> - This pull request moves that block into a typed runtime-execution
module.
> - The service now has 6,417 lines. Readers can follow admission and
outer cleanup without reading the provider execution details.

## Linked Issues or Issue Description

Follow-up to #15746. I searched open heartbeat PRs and issues. I found
no competing runtime-execution extraction.

**What existing behavior does this improve?**

The organization and test coverage of native and legacy heartbeat
execution.

**Current behavior**

The heartbeat service contains a 912-line block for provider dispatch,
usage capture, workspace finalization, and instruction cleanup.

**Proposed behavior**

Move that block to `server/src/services/heartbeat/runtime-execution.ts`.
Keep the atomic dispatch gate, admission, terminal run status, and outer
lease cleanup in the service. Preserve run behavior.

**Reason and benefit**

This gives runtime execution a named boundary and direct tests. It
removes 878 lines from the main service in one bounded change.

**Breaking changes**

None intended. There are no schema, API, or policy changes.

## What Changed

- Add `executeHeartbeatRuntime` for prepared native and legacy
execution, usage capture, workspace finalization, and
gateway/instruction cleanup.
- Return an explicit dispatch result. Update outer ownership state
through immediate callbacks, including before exceptions. Read
instruction state through live getters.
- Move the two internal recovery error classes with their existing
behavior. The caller imports the same classes for `instanceof` checks.
- Add 15 database-backed execution tests. Keep the existing heartbeat
regression suites.
- Repair the native Stop acceptance fixture: installed Codex now takes
precedence over `PATH`. A test-only loader pins the fake provider. An
isolated home and dummy key keep readiness offline. Add four loader
tests.
- Document the module boundary and fixture setup.

## Verification

- Passed: eight focused heartbeat suites (483 distinct tests, including
15 new execution tests). The boundary suite passed again after adding
the failed-restore retention case from review.
- Passed: `node --test
tests/e2e/fixtures/composer-stop-codex-loader.test.mjs` (four tests).
- Passed: `pnpm -r typecheck` and `pnpm build`.
- Passed: AST comparison of all 912 moved lines after the explicit
boundary substitutions. SQL template text, recovery class bodies, public
exports, and the rest of the executor match the baseline.
- Passed: browser Stop journeys for legacy process and native Paperclip
Runner (two tests). The native fixture log proves provider `turn/start`
before Stop and `turn/interrupt` after Stop.
- Passed: all three ACP continuation browser journeys (same-session
queued input, no replay of an interrupted write, and a new direction
after composer Stop). Five relevant browser journeys passed in total.
- Passed: the full CI test groups, including all server, chat,
workspace, serialized-server, runner, and browser shards.
- Local full-suite limitation: `pnpm test:run` first hit the macOS
shared-memory segment limit while starting embedded PostgreSQL. After
releasing only this task’s unused acceptance-server segments, the retry
progressed without reported failures. I stopped that duplicate run after
the full CI test groups passed.

- Passed: all 56 PR checks/statuses on
`8694c116e8d43ed8ac11bc4c58623ea3af34a675`. Greptile is 5/5 with no
unresolved review threads.

## Risks

- Cleanup depends on state written before an error. The module reports
dispatch, retention, and recovery ownership immediately. Tests cover
early returns and exceptional cleanup.
- Instruction callbacks can replace saved metadata during execution.
Live getters preserve those changes.
- Native acceptance uses a real server, database, browser, and Rust
runner with a deterministic provider. It does not verify a live provider
service.

## Model Used

OpenAI Codex, GPT-6 family, with reasoning and repository/tool access.
The exact serving model ID and context-window limit were not exposed in
this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-10 09:10:53 -05:00