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0d03610d2f |
fix(opencode): export bounded tool argument diagnostics (#18699)
## Thinking Path > - Paperclip manages work across agent runtimes. > - Company observability sends allowed records to the operator's OTLP receiver. > - Native OpenCode exports tool results but omits submitted argument diagnostics. > - Exact argument values are excluded by the current capture policy. > - Safe type information can distinguish malformed envelopes without copying private values. > - This change exports a fixed diagnostic shape from authenticated dispatch and schema-rejection events. > - Operators can compare rejected and accepted calls under the existing capture controls. ## Linked Issues or Issue Description **What happened?** OpenCode tool spans omit argument diagnostics. The exporter reads native tool events. The authenticated MCP boundary has the submitted arguments, but its dispatch item events do not create tool spans. Calls rejected by its schema check do not emit dispatch items. **Expected behavior** With tool details and tool content enabled, Paperclip tool spans include the method, diagnostic schema version and allowed argument field types. Exact values and arbitrary field names stay excluded. **Steps to reproduce** 1. Configure a company OTLP receiver and enable native OpenCode export. 2. Enable tool details and tool content. 3. Submit a rejected Paperclip tool call and then a valid call. 4. Inspect the input diagnostics and outcome of each span. Related work: #17989 proposes metadata-only native export. #18098 added the normalized content exporter. This change repairs argument diagnostics in that exporter. ## What Changed - Export `paperclip.opencode.tool-diagnostics.v1` as `braintrust.input` for authenticated Paperclip tool calls. - Include `tools/call`, the argument type and types for a fixed list of envelope fields. - Use dispatch IDs for Paperclip tool spans. Keep separately named `opencode tool ...` provider records for failures before dispatch. Mark each span source. - Preserve schema-rejected calls as failed items without invoking the controller handler. Keep authentication and the closed tool catalog. - Bound schema-rejection error text in stored events and transcripts with the existing redaction and 8 KiB limit. Keep the provider response unchanged. - Preserve the controller opt-in, tool-detail and tool-content switches, redaction, limits and run identity. - Add MCP-to-receiver regression coverage and update the capture policy and capability maps. ### Hypothesis and thesis for a fix The exporter drops the dispatch diagnostic signal. Raw input omission is intentional. The repair belongs in the OpenCode driver and exporter. Shared protocol, tool permissions and task completion stay unchanged. The regression sends schema-rejected, handler-rejected and valid argument envelopes through a fixture OpenCode subprocess and the authenticated MCP bridge. It checks the downstream rejection and receipt, completion event and actual local OTLP request. The baseline has no dispatch spans. The candidate has separate spans with safe type diagnostics. Two warm runs and disabled capture use the same path. Source: [OpenCode diagnostic pattern](https://www.braintrust.dev/app/Paperclip/p/Paperclip%20Staging/patterns/f172172e-9c65-453f-bb3a-7c6ba4f5a400). ## Verification - Baseline: `a92f616cd0a457c8ba85d994b24e1f92c2e4d1de`. The new integration regression fails because tool spans are absent. The same regression passes with this change. - Exporter and MCP bridge suites: 37 tests pass. Three final driver controls pass. Ten selected controls also passed before the final provider-record repair. Runner TypeScript typecheck and build pass after the review repair. - The review regression failed with two spans before the repair. It passes with three spans after the repair. Unauthenticated and unassigned calls do not reach the rejection observer. A broken observer cannot change the schema rejection. - The full OpenCode/exporter/MCP run passes 94 tests and fails one existing final-answer selection test. The same failure occurs in an untouched baseline checkout. It is not claimed as a pass. - A further filtered run reached the default five-second timeout in two existing continuation tests during concurrent repository checks. All five selected dispatch, warm-session and continuation controls pass with a 15-second test deadline. The earlier timeouts remain recorded. - `node scripts/check-maps.mjs` and `git diff --check` pass. - Runner TypeScript checks and build pass. Full repository typecheck and build stop at Rust because `cargo` is not installed. The full repository test command was stopped before workspace handoff. No full-suite pass is claimed. Local source commits: `c48a8af1c186e415c802fa0ac95209b16b4a3122` `6744991f6`, and `a8ccf4693`. The remote branch is based on newer master `4814d1ab691c176170510a93a175dafdc9e021c7`. All initial eight changed files match between those bases before the patch. - The integration provider and controller are fixtures. The OTLP receiver is a real local HTTP server. A separate real OpenCode 1.18.34 probe opened a session. The remote free model returned `Free usage limit reached`. No tool call or receipt was produced. No live recovery is claimed. - Review follow-up: a real MCP request with 12,000 invalid array elements produced a 264,908-character event error before the repair. The same regression now stores 8,192 characters in both events and transcript. The MCP error receipt stays unchanged and no handler runs. All 37 exporter/MCP tests and 12 selected driver/exporter/MCP controls pass. Runner TypeScript checks and build pass. Local follow-up commit: `64d4fa583`. - The previous remote head passed Runner, typecheck, build and E2E. Its unchanged attention-retention shard failed twice with 15-second timeouts, then cleanup deadlock and duplicate fixture IDs. Both affected retention suites passed all 70 tests locally unchanged. The new head needs fresh CI and review; no full CI pass is claimed. - Current-master qualification (2026-11-06, merge `2959ecdb8d`): normally merge master `53645a0104`, including the existing test-only retention-fixture repair from #18774 reused by #18770. Keep the OpenCode diagnostics feature and upstream durable MCP and completion-feedback behavior. No test deadline or assertion changed. The three old CI timeouts did not reproduce locally: the four completed-blocker-history cases passed on the old head in 29.52 seconds, then passed on the merged head in 13.23 seconds. The fixture rollback/provenance regression also passed. All 116 exporter, MCP bridge and OpenCode driver fixture tests passed. Runner TypeScript checks and both TypeScript compilation targets passed; ACPX profiles match the release manifest and protocol-contract checks pass. These checks use local PostgreSQL, HTTP and process fixtures. No hosted provider call or deployed recovery is claimed. Fresh CI and review are pending for this merge. - Map-scope review follow-up (`61e662e179`): remove only the inherited diagnostics paragraphs from the company capability maps. This change adds logging detail within an existing capability. `node scripts/check-maps.mjs` and `git diff --check` pass. Production and test inputs are unchanged from the qualified merge; fresh CI and review are pending for the final head. - Test compiler follow-up (`6675b46377`): reproduce CI TS2722 with `tsc -p packages/paperclip-runner/tsconfig.test.json --noEmit`. The harness contract makes transcript retrieval optional. The OpenCode bounds regression now fails explicitly if that capability is absent, then inspects the narrowed method. The same complete Runner test compiler project passes, and the actual local schema-rejection fixture passes with all receipt and 8 KiB assertions retained. Production inputs are unchanged. Fresh final-head CI and review are pending. - Final-head qualification: `6675b4637743aa269e5214756b158e1e0a4561a5` passes all 56 applicable CI checks (three skipped, one neutral review). [CI result](https://github.com/paperclipai/paperclip/actions/runs/42253119577). Greptile gives 5/5 with no open findings. Hosted task recovery remains pending verified rollout. ## Risks - Authenticated spans use dispatch IDs. Provider records use separate names and a source attribute. Consumers must choose the source they need to avoid counting two observations of the same tool action. - Safe types cannot reconstruct nested arguments or explain every value-level validation failure. - Export remains best effort and bounded. Lost native frames no longer remove dispatch diagnostics, but abrupt process termination can still lose a turn. - Full local Rust checks and a deployed product journey are not yet verified. The pull request is unmerged and not deployed. ## Model Used OpenAI GPT-6 through Codex, with reasoning, tool use and code execution. The exact runtime variant and context-window size are not exposed to this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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c6573962f8 |
fix(workspaces): recover full sandboxes through read-only export (#19465)
## Thinking Path > - Paperclip preserves agent work across failed runs and server restarts. > - A remote workspace must have a durable save before its source can be released. > - Portable capture normally writes a Git mirror and a full archive inside the sandbox. > - A full sandbox can prevent capture before the provider's streaming download starts. > - Retrying that write cannot create the required free space. > - This change transfers a checked standalone source and seals its archive on the controller. > - The source remains retained unless the existing durable save completes. ## Linked Issues or Issue Description Related: #18644 reduced temporary capture space. #18172 added the provider's disk-free directory transfer. This repair connects portable capture to that transfer when the archive itself cannot be created. **What happened?** Workspace capture returns `remote_workspace_sandbox_disk_full` after provider work has finished. File recovery repeats the same sandbox write. **Expected behavior** Recover a stable standalone workspace without requiring another full archive on the source disk. Preserve staged changes, untracked work, confined links and the original source. **Steps to reproduce** 1. Create a standalone Git repository with a commit, staged changes and an untracked result. 2. Use the existing real-command transport fixture. Inject ENOSPC into the sandbox helper write or archive write. 3. Run portable capture. Before this change it rejects the helper failure. 4. With the change, restore the saved archive after removing the fixture source. Check the commit, staged content, untracked result and Git connectivity. ## What Changed - Attempt one controller-side capture after an exact sandbox disk-full failure. - Read a source inventory without installing a helper. Use the existing provider bulk transfer with confined links and runtime exclusions. - Compare the transferred inventory with source fingerprints before and after sealing. - Reject copied Git pointers, alternates and administrative symlinks. Parse config as data without includes; allow only portable keys before controller Git normalization. - Preserve socket exclusions. Retain the source and remove incomplete controller staging after failure. - Update execution semantics and focused regression coverage. No database migration or new execution authority. ## Verification - TDD red on base `2f35eb1080`: the new full-sandbox test failed with `remote_workspace_sandbox_disk_full` before production edits. - Green: 202 transport and archive tests passed before the additional Git configuration guards. At head `8541086cb5`, all 116 transport tests and the PostgreSQL durability acceptance pass. The final `e24e173ec9` exclusion guard passes those 116 cases plus its new Git-history regression across the full run and focused rerun. Environment: macOS arm64, Node 26.4.0; real Node/Git commands and filesystem transfer. - Review regressions were also red before their fixes: an internal Git config symlink bypassed the check, and `core.attributesFile` could select a controller path. Git administrative symlinks and nonportable config now fail before normalization. The focused safety selection passes 11 cases. - Cases cover helper and archive ENOSPC, commit/staged/untracked continuity after source removal, confined links, sockets, changed source, corrupt or extra copied files, unsafe Git metadata, retained diagnostic text and failed download. - Real PostgreSQL acceptance passes: normal workspace save recovers one sandbox ENOSPC, commits the encrypted snapshot, clears its writer, loses the original allocation, then independently reloads the saved result twice. The first acceptance attempt used an incorrect expected status (`available`); the documented state is `committed`. No production change was needed for that correction. - Review regressions for untracked Python/Node environments and excessive Git roots failed before their fixes. Dependency exclusions now match normal capture. Controller parsing starts only after whole-tree/repository budgets and layout checks; refspec/settings budgets and a shared two-minute verification/normalization deadline bound further work. The excessive-root test verifies zero Git subprocesses. - Real provider-boundary red/green: Daytona direct tar and capacity-fallback PTY transfers first dropped `._result.txt`. The new optional mapping contract preserves all user names and excludes only current transfer scratch. Kubernetes implements the same contract. Explicit caller exclusions and archive validation remain in force. - Standalone Linux qualification on Node 24.22.2/Debian bookworm: fresh shared/SDK build; Daytona and Kubernetes typecheck and build; Daytona file-sync/capacity/diagnostics 68/68 pass; Kubernetes file-sync 31/31 pass, including the actual `/proc` case. Qualification was refreshed again on the final `be6f7feacc` source tree: current shared/SDK rebuilt; all 815 staged source/config/manifest hashes match the delivered tree before and after testing. An initial container run as root bypassed a read-only file test; the same source passes as uid 1000. Installing zstd enabled eight initially skipped cases. - A further review regression proved `.git/pyvenv.cfg` could exclude Git history as a dependency. The inventory now handles `.git` before dependency filtering, matching normal capture. The full capture/restore test verifies the original commit and saved work. The first green attempt incorrectly compared command-result object identity; correcting the test to compare stdout passed with no production change. - Further red/green regressions cover read-only private-copy cleanup, a regular file replaced by a FIFO before open, case aliases of Git administrative metadata, and permission preservation under restrictive umask. Nonblocking no-follow file handles verify identity before and after reading. Cleanup changes only private controller directories. Provider extraction preserves ordinary permissions, refuses special mode bits before writing, and does not adopt source ownership, ACLs, attributes or flags. Final macOS Daytona tests pass 65/65; the final Linux qualification above was repeated on these exact provider sources. - Focused strict TypeScript compilation of the inventory and archive modules passes. - The first sandboxed archive run failed three Unix socket fixtures with EPERM. The permitted run outside that filesystem sandbox passed all tests. - Initial full local server typecheck could not resolve the unbuilt Runner package and produced cascading errors. Exact-head `e24e173ec9` CI typecheck, build, Runner and browser checks pass. That CI attempt failed two server shards: the unchanged retained-cleanup backlog test timed out at 15 seconds and passes locally unchanged; ten cache-reclaim fixture oracles failed because directory fallback consumed their sealed-archive counters/faults. Final commit `caed4e4f83` isolates the intended unavailable-directory boundary while preserving archive counts, recovery status, integrity and no-second-reclamation assertions. Those ten failures reproduced locally before the fixture edit. The full affected file passes 394/395; its sole other HTTP socket-hang-up case passes unchanged in an isolated rerun. This is combined coverage of all 395 cases, not a single complete green run. The final branch integrates master `53645a0104` at `98ea07225592930cbb0d18bcf250bc64f6bb13b4`, preserving upstream workspace phase timings. After integration: 117 transport cases, the PostgreSQL durability acceptance, the existing object-storage/timing regression, and 12 affected cache cases pass. The expanded recovery file now has 421 cases. Final-head `be6f7feacc45c1e32a26a2417e973f1e3752fd8d` CI passes all 55 applicable checks (three skipped, one neutral review), including the expanded recovery suite, typecheck, builds and Runner coverage. [CI result](https://github.com/paperclipai/paperclip/actions/runs/42251345554). - Provider exclusion regressions were red through four real Linux transfer paths: Daytona direct archive, direct safe-link repair, capacity PTY repair, and Kubernetes streaming. A root socket and nested regular file share a basename; literal glob-character files/subtrees also survive. Preserve mode now anchors tar exclusions as literal root-relative paths and escapes `find -path` pruning. Default callers keep glob semantics. Receipt-count regressions were also red before correcting preserved-output counting. All 31 Kubernetes and 68 Daytona tests, builds and typechecks pass on the final source with 815 matching inputs. - The final semantics documentation explicitly records special mode bits, the stricter config allowlist (including innocuous unlisted keys), and provider qualification limited to Daytona/Kubernetes; these address the optional current-head review observations without broadening controller Git authority. - No Daytona credential is available in this session. Provider transfer is a local filesystem boundary in these tests. Hosted task recovery and rollout remain unverified. ## Risks - Recovery reads the source repeatedly and transfers the standalone tree. It can take longer than normal capture. - Linked worktrees, initialized submodules, Git administrative symlinks, nonportable Git configuration, special mode bits and alternate object stores remain retained if the normal capture cannot finish. This fallback does not follow their pointers onto the controller. - A provider without usable directory export, a changed source, or insufficient controller space cannot produce a receipt. The original source stays retained. - The server, SDK and affected provider plugins must be built from this revision together. An older provider can fail inventory verification on names it omits; it cannot publish an incomplete save. No merge, publication or deployment is included. ## Model Used OpenAI GPT-6 family through Codex, with reasoning, code editing, shell tools and automated tests. The exact serving model ID and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub references) - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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871a9b3180 |
test(restart-chaos): add Phase 1 control-plane restart chaos harness (#19477)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The control plane owns task execution, recovery and Retry for every agent run > - Server restarts were the largest remaining source of stalled tasks in the staging soak campaign > - The soak could only observe restarts that staging happened to perform, so a failure could not be repeated > - This pull request adds a script harness that causes the restarts on purpose and grades each task on fixed rules > - The benefit is a repeatable restart failure with a replay command and an evidence bundle for each fixer ## Linked Issues or Issue Description **What existing behavior does this improve?** The restart test coverage. Today the runner-e2e restart cells test one fixed restart point per cell. They cannot run many tasks at once, cannot choose a random fault time, and cannot replay a failure. **Subsystem affected** Test tooling (`tests/restart-chaos/`). It reuses the runner-e2e process code in `tests/runner-e2e/`. Product code does not change. **Current behavior** Restart robustness is checked through a small set of fixed cells. A random restart during a real task has no defined pass rule. **Proposed behavior** A harness starts an isolated control plane and seeds a "Chaos Lab" company. It launches seeded workloads, injects K1, K2 or K4 faults at seeded times, and grades each task on rules R1 to R6 plus a deterministic task oracle. `--replay <wave>/<task>` repeats one task. **Reason and benefit** Fixers get a replay command and an evidence bundle for each failure signature. The first smoke wave already found three product signatures (dead Retry after a restart, a false over-budget stop after restarts, and an OpenCode turn killed mid-turn that ends as a provider failure). **Breaking changes** None. The change adds new test files, one entry in the test-project typecheck list and a gitignore entry. ## What Changed - Add `tests/restart-chaos/`: - `supervisor.ts` owns one isolated server. It reuses `replaceController`, the process-tree stopper, the environment isolation helpers, the config seed, the port reservation, the wrapper-owned Postgres and `server-entry.ts` from `tests/runner-e2e/`. It does not copy them. Faults: K1 (SIGKILL, immediate restart), K2 (SIGTERM, restart) and K4 (SIGKILL, 2 to 5 minute hold). Postgres and the controller runtime cache stay across a fault. - `seed.ts` creates the company, encrypted provider secrets, native Codex, ACPX Claude and OpenCode agents from the runner-e2e catalog, and the `chaos-sandbox` project. The project is a git repository with a Python CLI, one failing test and a four-minute `bench.sh`. - `scheduler.ts` makes a seeded plan of workload, adapter, fault, fire time, hold and nonce for each task. It saves the plan so that `--replay` can run one task again. - `observer.ts` polls each issue and its runs. When a task stops and offers Retry, it sends `POST /api/issues/:id/retry` one time, with the same body as `useTaskRetry.ts`. - `grader.ts` grades R1 to R6 as pure functions. `workloads.ts` defines workloads A1, B1, B5 and C1 and their oracles. - `evidence.ts` and `ledger.ts` write an evidence bundle for each failure, a JSONL ledger and `SUMMARY.md`. All results go to the gitignored `tests/restart-chaos/results/`. Known provider key values are redacted. - Unit tests: `scheduler.test.ts` (determinism, replay and CLI parsing) and `grader.test.ts` (R1 to R6 and the oracles on fixture timelines). These tests need no credentials. - Add `tests/restart-chaos` to the test-project typecheck list (`scripts/typecheck-test-projects.mjs`), with a `tsconfig.layers.json` like `tests/runner-e2e`. The harness runs through direct script invocations, not `package.json` scripts. - After the first Greptile review: - A failed fault or an unexpected server exit now gets one bounded recovery. If the recovery fails, the wave fails and does not hang. - Incomplete cleanup is now a harness error, and the harness keeps the instance. - After the C1 follow-up comment, the observer needs a fresh rest window before it grades the task. - `--replay` now fires the recorded faults that crossed the task, at the same offsets, including the faults that other tasks requested. - A failed workspace-operation read is now a sweep error. It cannot give a clean rest. - R2 now checks that workspace files from before the first fault still exist at rest. - B5 now needs the completion record that `bench.sh` writes for each task. - After the second round of reviews: - An idle `todo` or `in_progress` task with no live run and no named wait is no longer treated as resting. The observer keeps watching it until the task resumes or passes the R5 stall limit. - A failed injected fault now fails the wave with exit 2. - T-oracle commands run agent-editable code. They now run under a macOS Seatbelt sandbox with a scratch `HOME` and no network, and they cannot read the operator's home directory. On other platforms these commands are refused unless the operator explicitly allows them. - R4 now counts every active run. A wake comment may be served again only after a run that did not succeed. - Evidence redaction now covers every environment variable name that ends in `KEY`, `TOKEN`, `SECRET` or `PASSWORD`. - If the pre-fault snapshot fails, only R2 for that task is left unchecked. The wave continues. - B5 also needs bench progress that the harness observed while it polled. - Add `doc/plans/2026-11-06-control-plane-restart-chaos.md` and its campaign ledger. ## Verification - `pnpm exec vitest run --config tests/restart-chaos/vitest.config.ts`: 38 tests pass. The tests include observer tests with a fake API, a real `bench.sh` run, and a sandbox test that cannot read a canary secret. - `node scripts/typecheck-test-projects.mjs tests/restart-chaos`: passes. - `server/scripts/typecheck-layers.test.mjs`: 45 tests pass, including "covers every project under tests/". - A supervisor check with no credentials passed. K1 was ready again in about 6 seconds. K2 with a 3-second hold was ready again in about 9 seconds. Company data stayed readable. - One paid smoke wave ran: `--env local --adapters codex,claude,opencode --workloads A1,B1,C1 --faults K1 --tasks 3 --concurrency 2 --seed 7`. The harness worked from start to end, and all three tasks crossed a restart. The 0/3 result comes from product failures, which the campaign ledger records. A scan found no provider key in the results. - To run a wave: ```sh pnpm --filter @paperclipai/paperclip-runner build:runner-binaries set -a; source ~/.secrets; set +a node cli/node_modules/tsx/dist/cli.mjs tests/restart-chaos/main.ts --env local --adapters codex,claude,opencode --concurrency 4 --tasks 8 --faults K1,K2,K4 --seed 42 node cli/node_modules/tsx/dist/cli.mjs tests/restart-chaos/main.ts --replay <wave>/<task> ``` ## Risks - Low product risk. The change adds test tooling only and does not change product code. - A wave spends provider money. The company budget hard cap (`--budget-cents`, default 3000) is the only spend limit. The plan's per-wave and per-night refusal is not implemented yet. - Known gaps: - `--env daytona` is reserved. It fails with a TODO in `seed.ts`. The Daytona sandbox sweep for R6 is not implemented yet. - The project requests isolated git-worktree workspaces. A B1 task still ran in the shared fixture repository. Concurrent B1 and B5 tasks can share files. The oracles use marker files for each task. - Only K1, K2 and K4 at seeded random times are available. Boundary triggers (B1 to B16), other faults and the UI probe come in Phase 2. - The paid smoke did not exercise B5 or K4. - On macOS, B1 oracle commands need `python3` outside the operator's home directory, for example `/usr/bin` or Homebrew. On Linux they are refused until a sandbox is added. - The B5 proof is best-effort against a deliberately adversarial agent, because that agent can write to the workspace. - Startup phase timings come from polling `/api/ready`. The server records its own timings only as OpenTelemetry spans. - `pnpm verify` and the CI Vitest jobs do not select these unit tests. The root Vitest projects cover workspace packages only. CI typechecks the files, but the tests run only through the vitest command above. - After the smoke, rest detection and the review fixes changed. A recovery action that the board owns now counts as a rest, and R6 reports it. A paid wave did not run again after these changes. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - Claude Opus 5.5 (Anthropic), model ID `claude-opus-5-5`, used in Claude Code as an agent with tool use (shell, file edits) and extended thinking. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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e1332b997f |
fix(plugins): align tool run context and interaction input types (#19493)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Plugins add tools and issue-thread interactions through `@paperclipai/plugin-sdk` > - The SDK types are the public contract between the host and plugin authors > - Two parts of that contract do not match what the host does at runtime > - First, `ToolRunContext.projectId` says it is always a project UUID. The tool gateway sends an empty string when a run has no project. The direct tool route rejects such runs with 400 > - Second, three interaction helpers ask for the parsed output type, so plugin authors must pass fields that the host fills in with defaults > - This pull request makes the types and both tool paths agree with the runtime > - The benefit is that agents with no project can run plugin tools, and plugin authors can omit the fields that have defaults ## Linked Issues or Issue Description Fixes #3273 Related: #3274 removes the `projectId` requirement from the route. That change alone is not enough today: the route now also looks up the project to check its company, and that lookup needs a value. This pull request also skips that lookup when the run has no project. It gives plugins one value for "no project" on both tool paths. The new test typecheck in #18739 and #18839 also listed both problems as possible product problems. ## What Changed - `server/src/routes/plugins.ts`: `POST /api/plugins/tools/execute` accepts a `runContext.projectId` that is missing, `null`, or an empty string. It passes an empty string to the plugin, the same value that the tool gateway sends. It checks the project's company only when a project ID is present. A `projectId` that is not a string returns 400. - `server/src/routes/openapi.ts`: the request schema marks `runContext.projectId` as optional and nullable. - `packages/plugins/sdk/src/types.ts`: - The `ToolRunContext.projectId` comment says the value is an empty string when the run has no project. - `suggestTasks`, `requestConfirmation` and `requestCheckboxConfirmation` take `CreateIssueThreadInteractionInput`, as `askUserQuestions` already does. The host parses this input with the schema, so the defaults apply. - `packages/plugins/examples/plugin-kitchen-sink-example/src/worker.ts`: the example passes `undefined` instead of an empty project ID to `issues.create`. - `doc/plugins/PLUGIN_SPEC.md` (section 13.10): documents the empty project ID. - Tests: - `server/src/__tests__/plugin-routes-authz.test.ts`: tests a run with an empty, missing, or `null` project ID, which skips the project lookup. Also tests that a project ID that is not a string returns 400. - `packages/plugins/sdk/tests/testing-actions.test.ts`: removes the cast that the output type required. ## Verification - `pnpm exec vitest run server/src/__tests__/plugin-routes-authz.test.ts server/src/__tests__/openapi-routes.test.ts packages/plugins/sdk/tests/testing-actions.test.ts`: 3 files, 81 tests pass. - `cd server && pnpm typecheck`: passes. This includes the source layers and the three test-tree shards. - `tsc --noEmit` passes for `packages/plugins/sdk` (`tsconfig.json` and `tsconfig.test.json`) and for the kitchen-sink example. - Not run locally: the full `pnpm test:run` and the root `pnpm build`. Required CI covers them. ## Risks - Low risk. The direct tool route now accepts calls that it rejected before. It still checks that the agent and the run belong to the company. With no project ID, there is no project to check. - A plugin that reads `runCtx.projectId` can get an empty string on both tool paths. The tool gateway already sent this value before this change. Only the documentation is new. - The SDK parameter types are wider. Existing plugin code still compiles. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`) in Claude Code, with tool use (shell, file edits) and extended thinking. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [ ] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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7840d894fa |
fix: retain files after accepted remote copy-back exhausts retries (#19491)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Remote workspaces keep unsaved files bound to the run that wrote them. > - An accepted result can exhaust its copy-back retries before those files are saved. > - Failed-workspace preservation rejects every accepted result, so a stopped writer can keep the workspace held after a newer setup attempt fails. > - This pull request lets the existing owner retain files from that exact stopped remote writer. > - File recovery can then release the hold without applying the old result or repeating its provider work. ## Linked Issues or Issue Description **What happened?** A failed native remote writer had an accepted result and exhausted copy-back retries. Its sandbox was stopped with a valid retained-source receipt. A newer attempt failed on the writer's unsaved workspace. Task Retry could not register the missing file-recovery obligation because preservation returned as soon as it found the old accepted result. **Expected behavior** Task Retry must let the existing recovery owner save the exact retained files. The accepted result, failed attempts and current task must stay intact. The old provider work must not run again. **Steps to reproduce** 1. Finish native work in a remote task workspace and accept its completion result. 2. Exhaust copy-back retries, stop and retain that exact sandbox, and leave the workspace dirty. 3. Let a newer setup attempt fail on the old writer's hold. 4. Use ordinary task Retry. Before this fix, the missing file obligation is never recorded. **Paperclip version or commit** Reproduced against master at `51a65af9b81f3c60f8210047e9a3eeaada7bc155` with isolated PostgreSQL and real files. Related: #19385 preserves accepted copy-back interrupted by Stop. #19422 admits saved input after verified recovery. #19464 and #19466 repair preparation and Retry continuation. This change covers an older remote writer whose accepted copy-back has exhausted its retries. ## What Changed - Admit only terminal, exhausted accepted copy-back on a failed remote writer with a finished run and no live controller or finalizer. - Require the exact stop-and-retain receipt, accepted completion contract and current dirty workspace binding. Keep native-sync sources on their existing export path. - Use the existing file-preservation recorder and worker. Add no new recovery worker, schema, polling or replay path. - Cover bound and orphaned entry points, reusable leases, changed proof and the ordinary HTTP Retry journey. Document the recovery behavior. ## Verification - Causal baseline: the corrected bound-writer and orphaned-lease tests both fail without the source change and pass with it. - Assembled acceptance: authenticated HTTP Retry records the old writer's missing obligation; the real recovery service saves its files; concurrent continuation calls queue exactly one successor for the newer failed setup. PostgreSQL, filesystem, tar, Git and the API/service path are real. Provider transport is controlled, and no model turn is dispatched. - `pnpm check:module-boundaries`, `pnpm -r typecheck`, `pnpm build` and `git diff --check` pass. - Four full affected recovery suites pass: **659 tests**. Command: `pnpm --dir server exec vitest run --config vitest.config.ts src/services/workspace-recovery.test.ts src/services/native-runtime/native-failed-workspace-recovery.test.ts src/services/native-runtime/native-cancelled-workspace-preservation.test.ts src/services/native-runtime/native-workspace-export-retry.test.ts`. This includes the final 16 new regression, refusal and assembled journey cases. - `pnpm verify --explain` completed. It selected broad transitive coverage; this is planning evidence only. Hosted CI will supply the remaining broad coverage. - Dependency cost: extra indexed source/result reads run only for this exact terminal retained-result path, inside the existing bounded transaction. Existing notifications activate the existing recovery owner. No idle scan is added. - Fixture failures are accounted for: the first fixture used an active-only stop helper on a released lease. The corrected fixture produced the causal baseline above. One negative fixture tried to remove a contract while an accepted result referenced it and failed the database foreign key. That impossible fixture was removed; the positive journey passed in the same run. Neither fixture failure is reported as a product regression or a passing full run. - Hosted CI is fully green at the reviewed commit: 54 successful checks and 3 intentional skips, with no incomplete or failed checks. Greptile is 5/5 with no unresolved threads. - Hosted rollout and a live task continuation remain pending. Local API admission does not prove a deployed model run. ## Risks This expands file preservation for a narrow terminal failure. Wrong source identity could retain unrelated files; unchanged writer, epoch, location, provider lease, stop receipt and accepted contract checks fail closed. Active ownership, unsafe archives, rejected results and native-sync sources stay on their existing paths. Existing recovery owns physical source locking, copy verification and bounded retries. It preserves unknown action outcomes and leaves the accepted result uncommitted. There is no migration or configuration change. ## Model Used OpenAI Codex, `gpt-6.1-sol`, xhigh reasoning effort. Context window size is unavailable. Used repository tools, isolated tests and code execution. No delegated agents. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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51a65af9b8 |
fix(recovery): continue preserved preparation after process loss (#19464)
## Thinking Path > - Paperclip manages AI agents and their execution state. > - A server restart can stop workspace preparation before provider execution. > - Workspace recovery must preserve files before the task can continue. > - Recovery handled interrupted preparations but skipped failed process-loss records with the same no-provider certificate. > - A withheld first retry could also hide the remaining retry budget. > - This change resumes certified preparations through normal admission after file recovery. ## Linked Issues or Issue Description **What happened?** A process-loss attempt remained failed after workspace recovery completed. Its first retry had been cancelled before dispatch by the workspace hold. The task had no running attempt or automatic continuation. **Expected behavior** Continue once after the server proves that provider work did not start, file preservation completed, and the exact leases stopped. Retain the existing failure budget and all task admission gates. **Steps to reproduce** 1. Stop a Runner preparation before native runtime selection. Record the restart recovery bootstrap certificate. 2. Retain the workspace and withhold the first automatic retry before dispatch. 3. Complete file preservation and restart the recovery worker. 4. Observe that the old code schedules no successor. The regression test reproduces this with PostgreSQL and real filesystem operations. **Paperclip version or commit** Reproduced against master at `2f35eb1080`. Related prior work: #19422 continues saved user input after verified copy-back. This change handles automatic continuation of certified process-loss preparation. ## What Changed - Accept failed process-loss preparation only with the durable no-provider bootstrap certificate and existing execution, lease and file checks. - Discover and settle the recovered source through the existing preparation recovery path. - Continue from a verified withheld retry without rewriting its history or resetting its failure count. Adopt it only as the sole retry child; multiple-child history reuses the newest existing child deterministically. - Exercise automatic dispatch, preserved-file readback, one provider turn, accepted result and task completion in the local native-session fixture. - Keep a durable continuation receipt after file-hold settlement until a successor is recorded. Known gates wait for existing eligibility events. Unresolved delivery keeps its shared recovery deadline. - Document the recovery and retry-budget rules. ## Verification - Red: both new PostgreSQL/filesystem regressions failed with zero scheduled successors where one was required. - Green: 54 focused recovery, automatic-dispatch, interruption, multiple-child history and admission safety cases pass on `13c27c2c2f`. The full PostgreSQL admission adapter suite passes all 83 tests; server source declaration typecheck also passes. Local environment: Darwin arm64, Node 26.4.0, PostgreSQL 18.1, Vitest 5.0.3. - Additional red/green: interruption after committed settlement, pause/resume, failed enqueue after cursor advancement, and absence of an earlier retry all failed before their repairs. Restart before enqueue, restart after the successor claim, and pause/resume now preserve one continuation. A rolled-back eligibility change cannot start execution. Deferred and delivered records have no retry deadline. - Local acceptance uses the real heartbeat dispatcher, isolated files and PostgreSQL, with a simulated native provider. It reads the preserved file, writes continued work, accepts the structured result and completes the task once. - Negative cases retain no-certificate, provider-evidence, live-owner, Stop, missing-stop-receipt, wrong-snapshot, human-block, pause, reassignment, approval and exhaustion fences. - CI fixture regression: 4 error-propagation/concurrent-resolution cases pass after adding the new obligation read to their transaction stubs; existing assertions remain unchanged. - Existing idle-drain and notification contract regressions: 4 tests pass after restricting recovery wakes to actual durable obligations. Late approvals block scheduled, queued and final dispatch. - Additional existing retry-scheduling suite: 62 cases pass locally. The pre-provider quota case exceeds its existing 5-second terminal wait on this loaded Darwin host, including when tested alone and with the preceding retry implementation. It remains a local timing limitation; the assertion and timeout were not changed. All Linux CI server shards pass on the combined head, including this unchanged suite. - Existing run-control, legacy-recovery and shared execution-control lifecycle suites: 128 tests pass with the review repair. Required CI supplies final-revision broad coverage. - Real-Codex acceptance was not run: automatic approval review rejected authenticated provider execution because it could incur cost/external effects and required explicit approval. No provider call ran; the controlled-provider acceptance covers the causal restart and durable scheduling behavior. - Hosted acceptance and recovery of existing tasks require rollout. They have not been claimed from the local provider fixture. - Final-head review: Greptile 5/5 on `13c27c2c2f`, no outstanding findings. Another contributor added the multiple-child history safety repair in `13c27c2c2f` while CI was running. The delta was inspected and the 54 focused recovery cases rerun successfully. Required CI passes on that exact combined head: https://github.com/paperclipai/paperclip/actions/runs/42241794918. All 55 successful checks include aggregate `ci / verify`, typecheck, build, canary, all server and E2E shards, and Runner package/Rust/static checks. The separate Paperclip Review service check remains queued waiting for its assigned agent; no validated assessment has been returned. ## Risks A malformed preparation certificate or a false no-execution receipt could permit duplicate work. The existing checks still reject provider execution records, native coordinators, live controllers, unsettled leases and unverified files. The pending continuation must survive a restart without polling known admission blockers. A withheld retry retains its original row and consumes its remaining failure budget. Normal admission checks current ownership, approvals, pause and budgets. ## Model Used OpenAI GPT-6 family via Codex. The exact model ID and context window are unavailable in session metadata. Used reasoning, code editing and tool execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal task id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> Co-authored-by: Devin Foley <devin@paperclip.ing> |
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83c6832ccb |
fix(build): typecheck package, Playwright, and e2e test files in CI (#18839)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Runner, plugin, and Playwright tests verify how those agents run, connect, and appear in the board > - Most package tsconfigs exclude tests, and Vitest strips types, so a type error in those tests fails nothing > - The tests drifted to 803 real type errors, and some of those errors hid assertions that checked nothing > - paperclipai/paperclip#18739 and paperclipai/paperclip#18738 check the server test tree and four test projects, but not these files > - This pull request adds a required check for these test files, fixes every error, and fails CI if a test file is in no program > - The benefit is that a type error in any test file outside `server/src` now fails CI ## Linked Issues or Issue Description Refs #18739 Refs #18738 **What happened?** 517 test files were in no program that required CI checks. A type error in those files did not fail CI. **Expected behavior** CI fails on a type error in any test file. **Steps to reproduce** Add `export const value: number = "text";` to a test file under `packages/paperclip-runner/src` on master. CI stays green, because `tsconfig.json` excludes test files and Vitest strips types. **Measured gap** Each row is a program with its tests included, on one thread. File and error counts are for head `7d4b5e907a`. Memory peaks were measured before the two latest merges of master. | Group | Test files | Real errors | Peak | | --- | ---: | ---: | ---: | | `paperclip-runner` Node source | 290 | 644 | 1.09 GiB | | `paperclip-runner` surfaces | 9 | 12 | 0.42 GiB | | `paperclip-runner` devtools and examples | 14 | 0 | 0.68 GiB | | `sandbox-providers/kubernetes` | 21 | 65 | 0.44 GiB | | 8 other sandbox providers and `bridge-template` | 32 | 4 | 0.34 GiB | | `plugins/sdk` | 22 | 15 | 0.41 GiB | | `plugin-workspace-diff` | 5 | 0 | 0.37 GiB | | `plugin-orchestration-smoke-example` | 1 | 1 | 0.15 GiB | | `kv-demo-mcp-server` | 3 | 0 | 0.13 GiB | | `packages/db` scripts | 1 | 0 | 1.01 GiB | | 8 Playwright suites under `tests/` | 52 | 25 | 1.72 GiB | | `tests/runner-acceptance` | 3 | 0 | 0.58 GiB | | `tests/e2e`, through layer declarations | 63 | 37 | at most 1.59 GiB | | `ui` `AttentionInteractionResolver.test.tsx` | 1 | 0 | n/a | | **Total** | **517** | **803** | | 27 of the 803 errors came from master while this pull request was open. Each merge of master brought new test code that no check had read. Errors that were config errors, not real errors: - One TS2688 for each provider, because the root install does not install provider dependencies. - 9 in the Runner Node program (TS7016 and TS6059). - 2 in `tsconfig.browser.json`. TypeScript 7 removed `baseUrl`, so that config was invalid. - 213 in the Playwright suites (`@/*` aliases and Vite types). - About 60 in `tests/e2e` (import extensions and aliases). `packages/plugins/create-paperclip-plugin` has no gap. Its tsconfig excludes its test, but `cli/tsconfig.json` reaches that test through an import. `server/test-baselines` also has no gap, because `tests/lifecycle-baseline` reads it. ## What Changed - Added `scripts/typecheck-test-programs.mjs` and its tests. The `Typecheck + Release Registry` job runs it. It checks each program in `PROGRAMS` on one thread. - The script fails if a tracked `*.test.ts(x)` or `*.spec.ts(x)` file outside `server/src` is in no program. The compiler file list decides this, because `include` drops `foo.test.tsx` when `foo.test.ts` exists. - Added a `tsconfig.test.json` to each uncovered package, and `tests/tsconfig.playwright.json`. - Added `tests/e2e` to `PROJECTS` in `scripts/typecheck-test-projects.mjs`, with a `tsconfig.json` and a `tsconfig.layers.json`. - Added `scripts/typecheck-sandbox-providers`. It is a small workspace that installs provider SDKs from one lockfile. I did not add a lockfile inside each provider, because `scripts/build-standalone-public-packages.mjs` uses a frozen install when one exists, and that changes what a release resolves. - Corrected `packages/paperclip-runner/tsconfig.browser.json` for TypeScript 7. - Set `rootDir` to `..` in `packages/paperclip-runner/tsconfig.test.json`, because one Runner test imports from `packages/adapter-utils/src`. The program does not emit files, so this changes no build output. - Moved the Kubernetes provider from `vitest ^3.2.4` to `^4.1.8`, the version the other providers use. Vitest 3 requires `tinypool ^1.1.1`, which has two critical advisories (GHSA-85c8-ppgw-ccpr and GHSA-5gmw-xhrv-c9v3). The first patched version is 2.1.2. Its tests have the same result on both versions: 189 passed, and the same 12 `file-sync` tests failed. - Moved the Kubernetes provider from `zod ^3.24.2` to `^4.6.6`, and gave its two `z.record` calls a key schema. This is the only production change, and it stays in this pull request. See "Production change for review". - Renamed `AttentionInteractionResolver.test.ts` to `AttentionInteractionResolver.replace.test.ts`, so TypeScript reads the `.test.tsx` beside it. - Fixed all 803 errors, with changes to test files and test support only. The fix for `contracts/native-execution.test.ts` is the same as the fix in paperclipai/paperclip#18739, so those two changes merge cleanly. - Updated `doc/DEVELOPING.md`. This pull request does not edit `server/scripts/typecheck-layers.mjs`. paperclipai/paperclip#18739 and paperclipai/paperclip#18738 have both merged, and this branch includes them. ### Production change for review The new lockfile made dependency review flag `zod@3.25.76` as a high-severity advisory (GHSA-mrhx-c7xc-m3w5). The first patched version is 4.6.6, so 3.x has no fix. The published Kubernetes plugin uses zod to validate operator config. The zod 3 source does not compile against zod 4, so a typecheck-only override cannot fix this. The existing tests do not prove this change, because they also passed with the invalid one-argument `z.record`. So I parsed 45 inputs with the same schema on zod 3.25.76 and zod 4.6.7: | Result | Inputs | Detail | | --- | ---: | --- | | Identical | 23 | Includes defaults, valid config, and a `__proto__` key | | Same outcome, new error wording | 21 | For example, `Invalid url` is now `Invalid URL`. `validateConfig` shows this text to operators. | | Different outcome | 1 | `jobTtlSecondsAfterFinished: 2 ** 60` was valid and is now rejected. The new limit is `Number.MAX_SAFE_INTEGER`. | I did not test this against a real cluster. The decision is to keep this change in this pull request. Since then, paperclipai/paperclip#17364 has moved the rest of the repository to zod 4.6.x, so the Kubernetes plugin now matches it. ### Behavior change for review `reducedMotion` under `use` is not a Playwright option. It had no effect in 11 configs and 2 `test.use` calls, so those suites ran with `no-preference`. The options are now under `contextOptions`, so reduced motion now takes effect. `app-shell-design.spec.ts` asserts a real transition, so it now asks for `no-preference` itself. The baseline manifest has `snapshotCount: 0`, so this invalidates no published baseline. A frozen trial reference PNG can differ. ### Findings These are product questions. I did not change them, and I did not hide them with casts: 1. **`PrpEvent` and its schema disagree.** The TypeScript type in `src/protocol/replay-contract.ts` requires `normalizedSessionId`. The `required` list in `protocol/schemas/event.schema.json` does not include it. `validatePrpEvent` accepts events that the type forbids. 2. **`requestCheckboxConfirmation` is stricter than its runtime.** It uses the output type, so plugin authors must pass `continuationPolicy` and `allowDeclineReason`, although the schema gives them defaults. `z.input` would fix this. 3. **`RetainedRunnerdMaintenanceInput.backend.kind` is a free string.** The quarantine domain comes from `descriptor.kind`, but the release uses `proof.backend.kind`. If they differ, `completeRetainedNativeSessionCleanup` returns 0 and the quarantine stays. The production caller passes `"runner"` today, so this is not a live bug. 4. **`CodexHarnessSession.close(input?)` is optional, but the contract requires `{ reason }`.** These are tests that verified nothing. I corrected them, and they pass: - `backends/native-instruction-measurement.test.ts` filtered on `placement === "core"`, which is not a valid placement. It measured an empty tool list. It now measures 14 tools. - `drivers/acpx/codex-acpx-driver.test.ts` checked for `usage.updated`, which is not an event type. - The `hostFixture()` helper in `drivers/acpx/runtime-host.test.ts` ignored two overrides, so `expect(prepareSandbox).not.toHaveBeenCalled()` could not fail. - `live/live-session.test.ts` set `agent: "pi"` before a spread that overwrote it. - `native-distribution-integrity.test.ts` passed an AbortSignal where `openCommand` expects `{ signal }`. These are gaps that this pull request does not close: - **The root lockfile still has some old zod versions.** paperclipai/paperclip#17364 moved the direct zod dependencies to 4.6.x. `pnpm-lock.yaml` still resolves `zod@3.25.76`, `4.1.11`, and `4.4.3`, which are below the patched 4.6.6. `packages/paperclip-runner/scripts/pi-distribution/package.json` pins `zod` to `3.25.76`, and some agent SDKs resolve `4.4.3`. Dependency review does not flag them, because this pull request does not add them. - **Dead GitHub coverage.** `chat-adapters-ui-providers.spec.ts` returned early for GitHub, so four later `provider === "github"` branches never ran. I removed them. They included the private key file and paste match, and the reconnect flow. Nothing asserts those behaviors in that spec now. - **Provider tests do not run in CI.** The root `vitest.config.ts` lists only Daytona. The other 8 providers, `bridge-template` included, are typechecked now, but CI does not run their tests. - **One `packages/db` test never runs.** `scripts/clean-poisoned-claude-sessions.test.ts` is outside the `include` of `packages/db/vitest.config.ts`. - **`plugin-orchestration-smoke-example` does not collect.** `@paperclipai/shared` is not linked in its `node_modules`. It passes 3 of 3 with an alias. ## Verification Run these commands: ```sh node scripts/typecheck-test-programs.mjs --low-memory pnpm --filter @paperclipai/server typecheck node scripts/typecheck-test-projects.mjs --low-memory --reuse-declarations node --test scripts/typecheck-test-programs.test.mjs ``` Results on macOS (arm64), Node 26.12. CI uses Node 24, and its `Typecheck + Release Registry` job also passes. At head `7d4b5e907a`, the test programs, `tests/e2e`, and the script tests pass again with 0 errors. The times and peaks below come from the run before the two latest merges of master: | Check | Result | | --- | --- | | Test programs, `--low-memory` | Exit 0, 0 errors, 42 seconds, peak 1.78 GiB | | Server layers, low memory | Exit 0, 0 errors, 38 seconds, peak 3.41 GiB | | Test projects, including `tests/e2e` | Exit 0, 0 errors, 13 seconds, peak 1.59 GiB | | Script tests | 12 passed | | Injected type error in each of 23 places | Each one failed its program with TS2322 | | Coverage check | 0 unchecked files, 10 seconds | I did not run this in a 4 GiB container. The peaks above are `maximum resident set size` for the largest single process. **Runtime check of the fixes.** Types do not prove that a test still works, so I ran the suites before the two latest merges of master: | Suite | Result | | --- | --- | | Runner, full suite | 4,885 passed, 3 failed, 13 skipped | | Sandbox providers, 10 packages | 939 passed, 12 failed, 36 skipped | | Plugin SDK | 200 passed | | `kv-demo-mcp-server` | 12 passed | | Renamed UI test and its sibling | 4 passed | All 15 failures exist without these fixes or come from the local machine: - **3 Cursor Cloud timeouts.** `artifact-delivery.test.ts` has 1 and `cursor-cloud-driver.test.ts` has 2. They time out in a full local run, and all 133 tests in those files with `codex-security-config.test.ts` pass when run alone. They fail in the same way with those two files at their unedited versions. - **12 Kubernetes `file-sync.test.ts` failures.** They fail in the same way before and after the fixes. The first failure is that `/proc/self/fd` does not exist on macOS. After each of the two latest merges of master, I ran only the Runner test files that I changed: | Merge | Result | | --- | --- | | `885c249cb9`, 8 files | 534 passed | | `7d4b5e907a`, 7 files | 672 passed, 16 failed | The 16 failures are in the two `source-reconciliation` test files. They fail in the same way with master's unedited versions of those files. 15 of them fail with `ACPX sidecar exited at initialize`, so I think my local build of the Rust and sidecar binaries is out of date. I did not rebuild them to check. CI builds them from scratch, and all Runner jobs pass in CI at `7d4b5e907a`. **Not run:** - `tests/e2e` and the 8 Playwright suites need a server, so most of them have only compile checks. `playwright test --list` loads 308 tests from the main e2e config. - `packages/plugins/sandbox-providers/kubernetes/test/integration` needs a cluster, so it has only compile checks. - I did not run the full `pnpm test:run` or root `pnpm build`. Required CI runs them. **Reduced motion.** I ran 6 motion-sensitive Storybook specs in system Chrome with a temporary config, once with `reduce` and once with `no-preference`. Both runs had 45 passed and the same 5 failed. So reduced motion did not change those results. The 5 failures do not depend on motion. At least one comes from the browser, because system Chrome prints `oklch(55.6% 0 0)` where the test expects `oklch(0.556 0 0)`. I did not run the other Storybook specs. The `storybook-visual` label runs that workflow. ## Risks - **A new lockfile to maintain.** A change to a provider `package.json` now fails the typecheck job until someone refreshes `scripts/typecheck-sandbox-providers/pnpm-lock.yaml`. The failure message gives the command. - **The job has a new install.** The step downloads provider SDKs, so it depends on the npm registry. It uses `--frozen-lockfile` and `--ignore-scripts`. - **The local install replaces provider `node_modules`.** A contributor with a standalone provider install must reinstall that provider after running the script. - **Reduced motion can change Storybook results.** See "Behavior change for review". That workflow is not part of required CI. - **Kubernetes plugin validation changed.** A release of this plugin ships zod 4. Error wording changes, and very large integers are now rejected. See "Production change for review". - **Master moves fast.** Each merge of master brought new test code with type errors, 27 so far. After this merges, the check reports those errors in the pull request that adds them. ## Model Used - Provider: Anthropic Claude, through Claude Code - Model: Claude Opus 5.5 (`claude-opus-5-5`) - Capabilities: tool use, code execution, and subagents for the type fixes in separate files ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [ ] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details. The app generated the branch name. - [ ] I have run tests locally and they pass. See the failures explained in Verification. - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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18ff71bca3 |
fix(ci): load the lockfile policy from the current base-branch tip (#19390)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Only trusted environments may change `pnpm-lock.yaml`. #19356 moved that rule into `.github/scripts/lockfile-trust.mjs`. > - The `pr-trusted.yml` policy job loads that script from trusted code, so a pull request cannot change the check that judges it. > - The job reads the trusted commit from `pull_request.base.sha`. GitHub does not move that value forward on every push. > - #17364 showed the result. Its recorded base was still the `master` commit from before #19356, so the job used the earlier rule. > - The earlier rule exempts any branch named `chore/refresh-lockfile`, including one from a fork. > - This pull request loads the policy from the first parent of GitHub's merge commit, which is the current base-branch tip. > - The benefit is that every pull request gets the current lockfile policy, including pull requests opened before #19356. ## Linked Issues or Issue Description Refs #19356, #17364. **What happened?** On #17364 at `482d76686e`, the "Block untrusted lockfile edits" step printed nothing and passed. `pull_request.base.sha` was `da3084a05d`, the `master` commit from before #19356. That commit has no `lockfile-trust.mjs`, so the step used the earlier rule. The merge commit that CI tested already contained #19356. **Expected behavior** The policy job runs the current `lockfile-trust.mjs` from `master` for every pull request. **Steps to reproduce** 1. Open a pull request before #19356 merged, or keep a pull request whose recorded base predates it. 2. Push a commit. GitHub keeps the old `pull_request.base.sha`. 3. The policy job uses the earlier rule. A fork branch named `chore/refresh-lockfile` can still change `pnpm-lock.yaml`. **Also found** In a local test, the script exited 0 without any check when it ran from a symlinked temporary directory. Its entry-point check compared a symlinked path with a real path. GitHub-hosted Linux runners do not use a symlinked `RUNNER_TEMP`, but the check must fail closed. ## What Changed - `pr-trusted.yml` "Block untrusted lockfile edits": - Load `lockfile-trust.mjs` from `$GITHUB_SHA^1`, the first parent of GitHub's merge commit. Do this only when `$GITHUB_SHA^2` is the PR head. Otherwise, keep `pull_request.base.sha`. - Give the script the same trusted base for its diff. - Fail the step if the script writes no `writer=` output. - `lockfile-trust.mjs`: compare real paths in the entry-point check. - `lockfile-trust.test.mjs`: run the real step script against a git history with a stale recorded base and a merge commit. Check that it blocks a contributor lockfile change on a `chore/refresh-lockfile` branch, allows a docs-only change, and falls back to the recorded base when no merge commit is present. - `doc/RELEASE-AUTOMATION-SETUP.md`: state where the job loads the policy from. ## Verification - `node --test '.github/scripts/tests/*.test.mjs'`: 709 passed. - The new stale-base test fails when the workflow change is removed. - The policy-step tests run with `RUNNER_TEMP` behind a symlink. They fail when the realpath fix is removed. - A test loads a policy that exits 0 without writing `writer=`. It fails when the fail-closed check is removed. - This pull request's own CI uses `pr-trusted.yml` from `master`. The new step takes effect after merge. ## Risks - If the checkout is not GitHub's merge commit, the step falls back to `pull_request.base.sha`, which is the current behavior. The `pull_request` event always checks out the merge commit by default. - The fail-closed check can fail a pull request if the script stops writing `writer=`. The script writes it on every path that returns. - Low risk otherwise. The change touches one workflow step, one script line, tests, and docs. ## Model Used - Anthropic Claude Opus 5.5 (`claude-opus-5-5`), with tool use and code execution, in Claude Code. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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26071353d2 |
feat(plugins): define settled task release and resume (#19468)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Environment plugins provide Runner tasks through the public SDK. > - A settled turn can leave resources that a later run can reuse. > - Core needs a shared contract to end active use and request the same logical session later. > - The host must retain control of capacity and report when reuse is unavailable. > - This pull request adds an optional release and resume contract with strict validation and documentation. > - The benefit is a common boundary for later host and Core integration across Codex and ACPX. ## Linked Issues or Issue Description **Subsystem affected** packages/plugins — plugin SDK and its environment task documentation. **Problem or motivation** The SDK has stop and completion operations. It has no explicit contract to release active use after a settled turn and later request the same logical session without promising retention or the same process. **Proposed solution** Add a versioned optional capability, release for the identified session, and resume with fresh transient authentication. Define two explicit resume outcomes: resumed or unavailable. Keep authorization, safe retries and ordinary attachment requirements explicit. **Alternatives considered** A provider-specific command would couple Core to one host. Reusing stop, completion or archive would change their existing meaning. A new checkpoint format or Runner mode is unnecessary. **Roadmap alignment** This extends the existing plugin and sandbox boundaries in ROADMAP.md. It adds no Core caller, provider implementation or runtime activation. **Additional context** The duplicate search found #19371, which fixes Core failure cleanup for a session resume owner. Its scope is separate. Related recovery work in #19157 and admission work in #19196 remain unchanged. ## What Changed - Add strict release and resume operation/result schemas and optional releaseResumeVersion: 1. - Reuse the existing task identity, inferred SDK exports and worker RPC types. - Define settled release, host retention policy, atomic reuse reservation, fresh authentication, retries that cannot release a newer owner and ordinary recovery. - Add schema and serialized worker RPC tests, including legacy replies and failure cases. ## Verification - SDK typecheck: `node_modules/.bin/tsc -p packages/plugins/sdk/tsconfig.json --noEmit` passed. - From `packages/plugins/sdk`, `../../../node_modules/.bin/vitest run --config vitest.config.ts tests/environment-task-release-resume.test.ts tests/environment-tasks.test.ts tests/environment-task-error.test.ts tests/environment-task-error-code.test.ts tests/worker-rpc-host.test.ts` passed: 94 tests across five suites. - `git diff --check` passed. - [Full GitHub CI](https://github.com/paperclipai/paperclip/actions/runs/42238743059) passed on `a55376801c91af29b68a13304d085706e4d7ed6f`. Standard Greptile scored that head 5/5 with no comments or unresolved review threads. - Full regressions run in GitHub CI, per the requested verification scope. No VM, deployment or live provider test was run. These tests prove the SDK boundary, not host retention or live attachment. ## Risks - This is an optional contract. Runtime behavior stays unchanged until later host and Core work uses it. - Older strict Core schemas reject the new description field. Providers must coordinate capability advertisement with a compatible Core. - Host implementations must enforce settlement, exact authority, exclusive claims and safe retries. Unknown outcomes remain errors. An unavailable result never proves physical termination. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used OpenAI GPT-6.1 Sol (`gpt-6.1-sol`), high reasoning, with repository inspection, code editing and local test tools. Context window size was not exposed by the runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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026dc6d135 |
fix(native): release a session-resume owner when the resumed run fails before its provider claim (#19371)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work
> - Native runs keep a finalization row. Its lease owner tells the
control plane that an execution may still be live.
> - Pausing an agent waits for `agentExecutionsHaveStopped`. That check
refuses to finish while any run of the agent has a lease owner, unless
the run was cancelled and has stop proof.
> - A same-run session resume claims that lease before it dispatches the
run. If the run then fails before the native executor takes its own
provider claim, nothing releases the resume owner.
> - The leaked owner blocks pause and resume for good, and the task
keeps looking like it has a live recovery path.
> - This pull request settles those rows at the source, and it adds a
stop-proof-gated release for rows that already leaked.
> - The benefit is that agents can pause and resume after an ordinary
resume failure, without database edits, and the cancelled-run stop-proof
rule stays as it is.
## Linked Issues or Issue Description
**What happened?**
An agent stayed in `pausing` with `hostComplete=false` and climbing
attempts. Its runs had `native_run_finalizations` rows with `phase:
observed`, `recovery_state: resuming_session`, a `lease_owner` like
`default:resume:<uuid>`, and no `result_id`. Each heartbeat run had
ended `failed`: either `setup_failed` (`Failed to acquire lease for
environment … Sandbox creation has failed`,
`native_remote_recovery_lease_mismatch`) or `adapter_failed`
(`runner_state_identity_mismatch: …`). The lease expired about 20
minutes after the run finished. Nothing settled the row. The only fix
was to set `lease_owner` to null by hand.
**Expected behavior**
When a resumed run fails before any provider turn starts, its
finalization row goes to `terminal_failure` and its lease owner is
released, as the native executor does for failures it sees. A row that
leaked before this fix is released in the background once its lease
expires and the run has stop proof. Pause then completes.
**Steps to reproduce**
1. Leave a native run in `retryable_failure` with a persisted
checkpoint, on a task that already has an active recovery incident.
2. Let session resume claim it (`claimNativeSessionResumptions` sets
`phase: observed` and a `…:resume:…` owner).
3. Make the resumed run fail before the executor claims it, for example
when the environment driver cannot create the sandbox.
4. The heartbeat failure path marks the run `failed`. The issue release
path does not settle the row, because it settles only when it opens a
new incident. The owner stays set, and `agentExecutionsHaveStopped`
returns false indefinitely.
**Paperclip version or commit**
`master` at
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06c0566a08 |
fix: make task Retry work after a refused automatic attempt (#19466)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Task Retry stores a durable request before it starts a new run. > - An automatic attempt can stop at the execution gate before a provider starts. > - That cancelled attempt becomes the source of the next Retry click. > - Admission rejected that source, or chose an older run that did not match the stored Retry authority. > - This pull request verifies the refused attempt and keeps it as the exact authority source. > - The user can start one new turn after the older execution holds pass their existing checks. ## Linked Issues or Issue Description **What happened?** Retry can remain deferred when the latest run was cancelled with `execution_reconciliation_required` before dispatch. An older failed preparation has an execution recovery hold. The Retry receipt names the cancelled child, but admission only accepts a failed preparation as an extra source. It can also choose the older run as `previousRunId`, which fails the exact source check at dispatch. **Expected behavior** Retry starts one new turn when the latest attempt has a verified pre-dispatch refusal and every older execution hold is ready. Provider activity, retained execution resources, missing receipts, or a live earlier process keep the hold. **Steps to reproduce** 1. Seed a failed native preparation and its recovery hold. 2. Let a later automatic attempt be cancelled by the stale queued execution gate before dispatch. 3. Click Retry against that latest cancelled attempt. 4. Before this change, continuation admission returns no receipt. After this change, one successor starts with authority bound to the clicked attempt. **Paperclip version or commit** Reproduced on `2f35eb1080`. Rebased onto `6cafcaf89b` for submission. **Deployment mode** Local source checkout with embedded PostgreSQL and the native Runner on macOS arm64. Refs #15383 and #16939. Those changes cover legacy conversation cancellation and queue promotion. This change covers the exact source of a task Retry receipt after a gate refused its automatic child. ## What Changed - Reuse the existing database-backed pre-dispatch refusal proof when admitting the exact Retry source. - Keep the clicked source as `previousRunId`. Continue to check every older execution hold. - Add database regressions for safe refusal, unsafe evidence, concurrent dispatch, and duplicate clicks. - Add an opt-in acceptance test that drives the authenticated Retry route through a real Codex turn and task finalization. - Document the admission contract. ## Verification - TDD: the new database regression returned `null` on the original code. It passes with the repair. - Final head `c43a84b1bf`: 487 tests pass across task Retry, explicit native continuation, and execution continuation. Server TypeScript and module boundary checks pass. - Live acceptance: `PAPERCLIP_LIVE_REFUSED_RETRY=true PAPERCLIP_RUNNER_BINARY=<current-source-runnerd> pnpm --dir server exec vitest run --config vitest.config.ts src/services/native-runtime/refused-task-retry.live.test.ts`. - The real HTTP request returned 202 on the final rebased head `c43a84b1bf`. Codex `gpt-6.1-sol` with high effort produced the requested file. The task became done, both task locks cleared, and finalization committed. A repeated click reused the same receipt and did not create another run. The source file stayed unchanged. - Server TypeScript check and module boundary check. - `pnpm verify --explain` returned 2 because the execution contract doc requires broad CI coverage. The required CI checks supply that coverage. ## Risks This changes execution admission. The existing proof requires the stored refusal receipt and no provider work or retained execution resources. Earlier recovery holds, process stop checks, decisions, actor authority, and task ownership still apply. No schema change or migration. ## Model Used OpenAI Codex, GPT-6 family, with reasoning, tool use, and code execution. The host does not expose an exact author model ID or context window. The live acceptance provider was `gpt-6.1-sol` with high reasoning effort. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green — all GitHub Actions checks pass on `c43a84b1bf`; Paperclip Review completed at 5/5 with no findings (neutral check conclusion). - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups — reviewed `c43a84b1bf` with no actionable findings - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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6ec4180ea1 |
fix: preserve ordinary diagnostic text during environment secret redaction (#19461)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Run diagnostics help operators find the cause of a failed agent run. > - The failure reporter treated unknown environment settings as credentials. > - It replaced every use of those values in diagnostic text. > - A flag set to `1`, `2`, or `safe` removed parts of dates, model names, versions, and normal words. > - This pull request preserves explicit ordinary settings and keeps unknown values private. > - Operators can read the failure details while real credentials stay masked. ## Linked Issues or Issue Description **What happened?** Run-failure contexts contained redaction markers inside timestamps, model names, driver versions, and the word "safely". Provider failure diagnostics used the same broad environment-value rule. **Expected behavior** Ordinary flags, counts, paths, regions, and mode labels leave diagnostic text readable. API keys, URL passwords, and declared secret bindings remain masked. **Steps to reproduce** 1. Set ordinary environment settings to `1`, `2`, and `safe`. 2. Report a failed native run with a timestamp, `gpt-6.1-sol`, `phase6-v2`, and "safely" in its details. 3. Inspect the run failure report. Before this fix, unrelated fragments are replaced. Related work: #13668 addresses a separate model-ID false positive. #11311 and #15524 address credential capture at other boundaries. This change keeps the existing command scanner and registered-secret replacement. ## What Changed - Add a shared environment selector in adapter-utils. Keep unknown values private. Exempt explicit ordinary process settings, typed flags and counts, mode labels, and key selectors. - Use the same selector for run-failure reports and inherited provider failure environments. Keep one policy for both consumers. - Keep configured provider bindings private because that API does not carry separate secret-reference metadata. - Preserve short declared secrets, unknown opaque values, encoded credentials, and inherited Bedrock tokens. Add regressions for ordinary `SORT_KEY` values and both Bedrock consumers. - Add screenshot-shaped regressions, real database reporter coverage, and credential tests. - Document the policy in `doc/observability.md`. The optional monitoring gate stays in place. ## Verification Linux, Node v25.9.0, pnpm 9.15.4. The published tree matches the tested local tree `cb236f072cca195e4c2cfb4034c7cc06ea7adbc5`. - Before the fix, four diagnostic regressions failed. The output reproduced the damaged timestamp, model, version, and word. - Review regressions: six tests failed on the first revision. They proved the missed Bedrock token, opaque inherited-value exposure, and key-selector false positive. All pass after the correction. - 555 focused tests pass on the final source tree. - `cd server && pnpm exec vitest run src/services/__tests__/run-failure-diagnostics.test.ts src/__tests__/redaction.test.ts src/__tests__/redact-sensitive.test.ts src/__tests__/run-secret-redaction.test.ts`: 206 passed. - `cd server && pnpm exec vitest run src/services/__tests__/run-failure-report.test.ts`: 289 passed, with real embedded PostgreSQL. - `pnpm exec vitest run packages/adapter-utils/src/command-redaction.test.ts packages/adapter-utils/src/acpx-engine/terminal-session-failure.test.ts`: 60 passed. - `pnpm --filter @paperclipai/adapter-utils typecheck`: passed. - `git diff --check`: passed. - The first reporter attempt could not load the unbuilt plugin SDK. It passed after `pnpm --filter @paperclipai/plugin-sdk ensure-build-deps`. - The filtered install omitted the CLI tsx loader, so `pnpm verify --explain` could not start. The equivalent verifier entry points ran with the installed server loader and returned exit 2: broader CI coverage is required for the observability document. - Full local build/typecheck and browser suites were not duplicated. [Final-revision CI](https://github.com/paperclipai/paperclip/actions/runs/42231412547) passed on `013960a4c6fa6279e1f28b0f6af5f036d7cad5a7`, attempt 1. This includes typecheck, build, general/server/chat tests, serialized suites, Runner checks, eight E2E shards, and the canary dry run. - [Greptile review](https://github.com/paperclipai/paperclip/pull/19461#issuecomment-6686592783) scored this head 5/5 with zero new findings. All four inline threads are resolved. The security rescan and Snyk status passed. The PR has no merge conflicts. ## Risks - Ordinary-setting exemptions need a known name or a name/value type rule. Unknown opaque values remain private. Declared secret bindings and recognizable credentials override these exemptions. - A real short secret still masks matching fragments. Removing that protection would expose the secret. - Existing stored redaction markers cannot restore their original text. This fix applies when new diagnostics are produced. - No migration, dependency, workflow, authorization, or default monitoring changes. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. This change is a focused bug fix. ## Model Used OpenAI GPT-6, through Codex, with shell execution and file tools. The host does not expose the exact runtime variant or context window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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d87f6fa4c2 |
test(runner-e2e): add staging-soak reliability cases to everyday workflows (#19455)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The paid runner E2E suite (`tests/runner-e2e`) drives the real browser, server, native runner, provider and Daytona > - A manual staging soak found about nine reliability bugs (S47–S55, H2, U9). Each fix got unit or integration tests > - The end-to-end journeys that exposed the bugs existed only as ad-hoc browser scripts, so a regression could return without a signal > - These journeys are expensive, so they must not run per PR or in `--all`. They must run on demand before a release > - This pull request adds the journeys to the existing `everyday-workflows` suite as an explicit `reliability` group > - The benefit is one command that runs the whole reliability set before a release or after a risky runner change ## Linked Issues or Issue Description **What is the problem?** The staging-soak scenarios that found S47–S55, H2 and U9 are not repeatable. They were ad-hoc browser scripts on staging. **Why does it matter?** Without a repeatable end-to-end case, a reliability regression (stalled follow-ups, duplicate execution, dead Retry, hangs after silent commands) can return without a signal. **What is the proposed solution?** Add the scenarios to the paid `everyday-workflows` suite as explicit-only cases with independent graders and a selectable `reliability` group. Refs #19370, #19355, #19354, #19407, #19419, #19394, #19421, #19431 (the related fixes). ## What Changed - `everyday-reliability-cases.ts`: seven new cases (`interrupt-redirect`, `reassign-midrun`, `three-turn-revise`, `long-silent-command`, `tree-pause-release`, `queue-steer`, `queued-across-restart`), their soak signatures, prompts, bounds and the explicit matrix. - `everyday-reliability-flow.ts`: browser and public-API drivers for each journey. A shared watcher records `executionBlocker`, `interruption` and execution projections while it waits. It uses an offered Retry at most once (never while an automatic retry is scheduled). - `everyday-reliability.ts`: pure graders. They encode the product rule: interrupted work resumes automatically or offers a Retry that works on first use. A send-a-message blocker, a dead or repeated Retry, a silent stall, or duplicate execution fails. - `types.ts` / `selectors.ts`: new optional `explicitGroup` on a task. Such a task is selected only by its group, `--case`, or an exact `--id`. `--all`, the plain suite and generic selectors skip it. `--list` still shows it. - `catalog.ts`: the suite gets the reliability tasks, the released Grok/Kimi/Pi facades (only for `long-silent-command`), a per-turn Daytona override for `three-turn-revise`, the `reliability` and `slow` groups, definition version 11, and a computed `expectedMatrixSize` (52 → 62). - `everyday-flow.ts`: a narrow hook calls the scenario driver after task creation. Riley is created for the reassign and tree cases. The reliability checks are added after settlement. - `everyday-observations.ts`: an allowed interrupted run may end `operator_interrupted` or `issue_reassigned`. Lifecycle checks accept a declared reassigned parent owner. - `live-fixtures.ts`: reliability cells get the existing 1,000-cent company and lead-agent hard stop. - Tests: new `everyday-reliability.test.ts` (selection exclusion, matrix, credentials, and calibrated pass/fail cases for every grader). Updated counts in `catalog.test.ts`, `everyday.test.ts` and `installed-cli.test.ts`. - Docs: new "Staging-soak reliability group" section in `EVERYDAY-WORKFLOWS.md` (cases, signatures, run commands, cadence, coverage boundary) and a link from `doc/evals.md`. `everyday-flow.ts` was already over 1,000 lines. This PR adds only about 20 lines of wiring there. The scenario logic is in the new modules. Matrix (10 cells, all Daytona, single attempt): one `runner-codex` (gpt-5.6-sol) cell per case, plus `runner-acpx-grok`, `runner-acpx-kimi` and `runner-acpx-pi` for `long-silent-command`. Run command: ```sh pnpm test:e2e:runner -- --suite everyday-workflows --group reliability --max-parallel 2 ``` ## Verification - `pnpm test:e2e:runner:typecheck` passes. - `node node_modules/vitest/vitest.mjs run --config tests/runner-e2e/vitest.config.ts everyday catalog installed-cli selectors support.test`: 15 files, 362 tests pass. - The full runner-e2e Vitest run has the same 14 failures with and without this change (`controller-outage`, `operating-receipts`, `pi-controls-evidence`, `pi-file-evidence`, `workflow-security`). These fail on the base commit in this local environment too. - `pnpm test:e2e:runner -- --list --suite everyday-workflows --group reliability` lists exactly the ten cells. - `--all`, `--suite everyday-workflows` (still 52 cells), profile/environment selectors and the daily/weekly scheduled selections contain no reliability cell. A test asserts this. - Not run: the paid cells. They need provider and Daytona credentials. The first paid run of the group is the acceptance step. ## Risks - The drivers have not run against a live stack. A first paid run can expose harness timing or selector issues (for example, how fast the queued Interrupt control appears). The failure then names the stalled step and keeps `reliability-observations.json`. - `long-silent-command` does not inject a runner connection loss. The named-cause contract is checked only if a loss happens naturally. - The Grok/Kimi/Pi facades run as ordinary released profiles. If one returns to pending qualification, it drops out of the group and the matrix size follows. - No product code changes. Existing everyday cells keep their selection and checks. The suite definition hash changes because the suite definition changed. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with tool use (shell, file edit, code execution). Standard context window. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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6cafcaf89b |
fix(workspaces): recover unpublished archived Git uploads (#19459)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Remote workspace imports preserve existing files before the server changes workspace authority. > - Archived Git imports reconstruct saved files and Git state in a private repository. > - A failed upload can leave a pending snapshot journal with no object in storage. > - A later reconstruction can have different Git administrative bytes for the same saved logical source. > - This pull request lets that import record a new unpublished capture after it proves that prior objects are absent. > - The benefit is safe retry through the original import journal while source checks and atomic publication remain in place. ## Linked Issues or Issue Description Refs #19396. Refs #19409. A snapshot upload can fail before object persistence. The caller then removes its private archive. A retry reconstructs the same saved Git workspace. If its administrative bytes differ, the snapshot owner rejects the retry with `remote_workspace_snapshot_operation_content_changed`. The pending journal remains blocked even though no snapshot object or remote authority was published. ## What Changed - Add an optional unpublished recapture capability to snapshot storage. Bind it to the original source operation. Existing callers keep the exact manifest check. - Enable this capability only for archived Git reconstruction. The migration owner keeps the source recipe, task binding, ownership, and publication checks. - Verify every prior object before new capture admission. Unknown or corrupt objects stop the retry. Reuse an available prior object, including an object that appears while the replacement upload runs. - Compare the observed upload journal under the snapshot row lock before appending an attempt. Keep network I/O outside that lock. Preserve all prior attempt metadata. - Keep the first atomic publication as the winner. A losing uploader verifies and returns that saved reference. - Add real PostgreSQL, filesystem, and Git regression tests. Document the retry behavior. ## Verification - Baseline `70d23612dd9176cae8ee6b2b6dcf2f6eade9a42a`: the new real Git fixture fails with `remote_workspace_snapshot_operation_content_changed`. It fails the first upload before persistence, removes the old source cache, and advances unrelated remote refs. The saved task commit and restore point stay fixed. - Final frozen source: 20 tests pass in a fresh process. This includes the real Git regression and all snapshot storage cases. Tests cover prior object recovery, corrupt and unknown objects, normal caller mismatch rejection, operation binding, stale journal admission, and late upload publication in both orders. - Reproduce the final focused check from `server/`: ```sh node ../node_modules/vitest/vitest.mjs run --config vitest.config.ts src/services/remote-workspace-snapshot-storage.test.ts src/services/remote-workspace-migration.test.ts -t 'failed-upload-retry|snapshot storage' --reporter=dot ``` - An earlier six-suite run had 201 passing cases and one failing late-object case. That run started before the final prior-object recheck was added. The failing case passes in the fresh final run above. This earlier run is not a clean full-family result for the final source. - That run skipped 16 lifecycle cases because `PAPERCLIP_REMOTE_WORKSPACE_LIFECYCLE_TEST_DATABASE_URL` was unset. Migration, storage, reservation, and concurrency tests used real disposable embedded PostgreSQL. - `git diff --check` passes. Full repository typecheck passed before rebasing. Full test, build, and current-head CI results are pending. ## Risks - The optional capability permits different physical captures. The migration owner must prove that the logical source and current ownership are unchanged. Ordinary mutable workspace uploads keep the previous mismatch guard. - An old upload can complete after the last object check. The first authenticated atomic publication wins. A late upload cannot replace its object or snapshot reference. Every candidate remains in the retention journal. - Unknown storage results and journal changes fail closed. They can require another canonical retry. This change adds no retry loop and changes no database schema. ## Model Used OpenAI Codex, GPT-6 family. The worker used reasoning, tool use, code editing, and local test execution. The worker runtime did not expose an exact model ID or context window. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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4696ff4990 |
fix: reserve agent In Progress display for active runs (#19453)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Task status must tell operators whether an agent is working or waiting. > - A task can retain its in-progress lifecycle status after its run stops. > - The shared read projection only handled scheduled monitoring waits. > - The UI also ignored other projected statuses for in-progress tasks. > - This pull request requires an active task run for the In Progress display. > - Operators can see waits without changing execution or recovery authority. ## Linked Issues or Issue Description **What happened?** An agent task still showed In Progress after its run ended with an access failure and left a pending connection request. Stale execution locks and saved lifecycle state could show the same false activity. **Expected behavior** An agent task shows In Progress only with a task-linked queued or running run. Otherwise, it shows Blocked for recovery, In Review for a pending response or review, Monitoring for a scheduled check, or Todo for remaining work. Human ownership keeps its selected status. **Steps to reproduce** 1. Create an agent-owned task with an in-progress lifecycle status. 2. End its run and retain a pending human request. 3. Read the task, its summary, and search results. Before this change, they still show In Progress. ## What Changed - Derive visible activity from company-scoped, task-linked runs in the existing shared SQL projection. - Project inactive tasks to existing waiting or todo states. Preserve lifecycle status, locks, admission, and recovery. - Make the shared UI resolver use the projection while preserving explicit and optimistic status changes. - Cover stopped runs, stale locks, human waits, company isolation, monitoring, filters, counts, search, and UI labels. - Document the presentation rule in the product and execution contracts. ## Verification - Red before the server fix: 7 new regression cases failed because they returned in_progress. The 10 existing cases passed. - Green after the server fix: 20 cases passed in issue-display-status.test.ts, using embedded Postgres and real task APIs/search. Seven nearby active-question cases also passed. - Review regression: dismissed requests, historical questions, and returned review work each failed before the follow-up fix. All three now pass using the existing active-interaction rule and pending review state. - Red before the UI fix: 4 label cases failed. Five additional safety cases caught stale projections hiding explicit transitions. - Green after the UI fix: 43 tests passed across task-status-presentation, issue-filters, and issue-detail-subissues. - pnpm -r typecheck passed. All UI token gates and synchronization checks passed. - pnpm build passed. Server typecheck and build passed again after the review fixes. - Full CI passed on |
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2f35eb1080 |
feat(dev): add incremental local verification and pass reuse (#19345)
## Thinking Path > - Paperclip coordinates agents that make and verify repository changes. > - Local verification currently defaults to the complete Vitest suite. > - Contributor instructions also require broad local checks at each PR handoff. > - CI already owns conservative affected-test selection and broad final-revision checks. > - This pull request adds local selection and pass reuse from those existing contracts. > - Agents can get focused feedback and use CI to close the remaining coverage gaps. ## Linked Issues or Issue Description **Subsystem affected** Developer verification scripts and contributor guidance. Related selection work: #18398 and #18464. **Problem or motivation** An agent that repeats an unchanged local verification step starts the complete suite again. The handoff guidance also duplicates broad CI coverage locally. **Proposed solution** Add `pnpm verify` for the actual working tree. Select affected Vitest specifications with the CI task policy and dependency graph. Reuse successful checks whose inputs are modeled. Run opaque checks fresh. Report exit 2 when broader verification is required. Update the contributor contract to accept applicable final-revision CI coverage. **Alternatives considered** Plain `vitest related` omits filesystem and opaque dependencies. Commit-only cache keys miss dirty files. Running full local suites at every handoff repeats CI work. **Roadmap alignment** This is repository development tooling. It does not change the product roadmap. ## What Changed - Add `pnpm verify`, `--explain`, `--base`, `--full`, and `--no-cache`. - Reuse CI selection and exact runner ownership for dirty, staged, committed, deleted, renamed, and untracked inputs. - Keep native server suites and serialized suites in their local owners. Keep six sequential chat shards. - Cache selected passes within one worktree. Hash source, fixtures, installed package contents, dependency bindings and installation metadata, dotenv files, child environment, toolchains, platform, and selection. - Run opaque consumers fresh. Preserve failed, interrupted, mutated-input, and partial-coverage outcomes. - Update AGENTS.md, CONTRIBUTING.md, and DEVELOPING.md guidance. Record the shared `verify` command as the sole exception to the package-script rule. Register the new tests in the existing CI contract-test command. - Add optional root/environment inputs to shared graph helpers. Existing CI defaults stay the same. ## Verification - Fourteen new integration tests pass locally across focused runs with real Vitest selection and execution; CI colors are covered. - 51 existing targeted selector/input, project-isolation, and stable-runner checks passed. Four relevant runner contracts also pass after the workspace change. - Repeated unchanged execution skips reusable tests. Source, environment, installed code, dependency bindings, and new untracked tests invalidate results. - Installed-code mutation with a restored modification time still invalidates a cached pass. Internal skill-directory links preserve reuse. - Workspace B/C tests prove discovery, reusable/fresh partition execution, pass reuse, and external-input failure. Chat selection produces exactly six single-worker partitions. - A deliberate unrelated failing test is omitted by narrow selection and caught by `--full`. - Red/green regressions prove fingerprints preserve file boundaries and reject edits made between diff discovery and snapshotting. - Opaque external-file changes still fail on a subsequent run. Source mutation and process interruption cannot publish reusable passes. - `pnpm verify --explain` works in the checkout and requests broad CI coverage for this tooling change. No duplicate full local suite was started. - [Final-revision CI](https://github.com/paperclipai/paperclip/actions/runs/42117291789) passed on `ed85d96ddff82c05c325948680b593b0f48c473d` (attempt 2). The scoped Canary retry preserved all passing test/build results. - [Greptile review](https://github.com/paperclipai/paperclip/pull/19345#issuecomment-6670050175) is 5/5; all four review threads are resolved. - The additional Paperclip review concluded neutral because its execution stopped; it produced no assessment. ## Risks - Pass reuse depends on conservative dependency classification. Opaque consumers, external database/live settings, and non-isolated projects retain fresh or broad coverage. - Local passes cover selected Vitest checks. Required CI, build/typecheck, release, browser, and platform acceptance remain separate obligations. - Cross-worktree caching and cross-agent scheduling are outside this change. - The initial installation scan reads dependency contents; stat-validated, worktree-local digest memoization avoids rereading unchanged contents. Subsequent scans still inspect file identity and nanosecond change/modification times. - No dependency lockfile or workflow changes. ## Model Used OpenAI Codex, `gpt-6.1-sol`, max reasoning, with local shell and file tools. Context window size is not exposed by this host. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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70d23612dd |
fix: offer Interrupt when queued-message steering is unavailable (#19450)
## Thinking Path > - Paperclip lets people manage work performed by AI agents. > - Task chat saves follow-up messages while an agent runs. > - A native runner can accept Steer only after an active provider turn exists. > - During preparation, or with an unsupported provider, the queue showed a disabled Steer button and no delivery action. > - The server also rejected Interrupt for ordinary native queues. > - This change offers an explicit Interrupt fallback and uses the existing cancellation and admission path. > - People can send their saved messages while Stop confirmation, cleanup, and execution gates remain enforced. ## Linked Issues or Issue Description Related: #15865 covers mixed legacy queues. #15030 covers steering acknowledgements. This change covers native queues without available steering. **What happened?** A queued message had a disabled Steer button while the native runner was still preparing. Clicking it did nothing. The server returned HTTP 409 for an explicit Interrupt request against the same native queue. **Expected behavior** Offer Steer when the provider can accept same-turn input. Otherwise offer Interrupt, labeled with its actual effect. Preserve saved messages until the previous execution stops and normal admission accepts the successor. **Steps to reproduce** 1. Start a task with the Paperclip Runner adapter. 2. Submit a follow-up while the run is preparing, before its provider turn opens. 3. Observe the disabled Steer button above the composer. 4. With this change, click Interrupt. The existing Stop path cancels the previous execution and submits the saved queue through normal admission. **Paperclip version or commit** Reproduced locally on master at |
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275b334fc5 |
fix(workspaces): skip redundant repository admission snapshots (#19444)
## Thinking Path
> - Paperclip manages AI agents and their execution state.
> - Remote workspace admission must preserve files before execution
starts.
> - Admission saved the entire workspace once per registered repository
on every run.
> - Existing snapshot receipts can prove that validated repositories are
already saved.
> - This change uses those receipts and saves new repositories once per
admission batch.
> - It also preserves fresh configuration metadata and reports actual
workspace reuse.
## Linked Issues or Issue Description
**What happened**
Remote follow-up runs uploaded an unchanged workspace for each
registered repository before starting the provider. Configuration
persistence also overwrote new evaluation metadata, and freshness logs
could claim replacement when the same workspace was reused.
**Expected behavior**
Validate existing repositories without uploads when a committed snapshot
covers their descriptors. Save acquired repositories before publishing
ready receipts. Retain current evaluation metadata and report the actual
workspace outcome.
**Steps to reproduce**
Use a remote workspace with two registered repositories. Prepare it,
then admit a follow-up run. Observe repository snapshot operations
despite unchanged repositories. The regression tests exercise this with
real Postgres, Git, and separate sandbox directories.
**Environment**
Server remote workspace admission at commit
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c0214826b3 |
fix(workspaces): preserve pending repository requests during import (#19439)
## Thinking Path > - Paperclip manages agent work and its saved files. > - An ephemeral web server needs remote workspace authority before the old volume can detach. > - A task can have a repository request that has never prepared a checkout. > - The offline importer currently treats that pending request as unfinished file publication. > - This blocks migration even when the target does not exist and there is no saved commit, branch or failure. > - This pull request preserves that request in the database and imports the existing files separately. > - The next authorized sandbox preparation can acquire the repository through its existing owner. ## Linked Issues or Issue Description **What happened?** On Core `253bf071f0a496554b61fff897ad3f11afaf8766`, offline migration of a volume-backed workspace fails with `repository_preparation_unresolved` for an untouched pending repository request. The requested directory has never existed. The request has no pinned commit, branch or failure. **Expected behavior** Preserve the pending request and all existing files. Do not label the absent checkout as part of a saved archive. Keep partial publication and active preparation blocked. **Steps to reproduce** Create a local task workspace. Add an unmaterialized pending repository request. Run the canonical offline importer after stopping writers. The unchanged importer rejects the request before preserving the workspace. Related migration work: #19429. A GitHub search found no duplicate pending-repository import fix or matching public issue. ## What Changed - Admit an untouched pending request only at the existing offline writer fence and after proving its target is absent. - Keep the database request unchanged and exclude it from materialized snapshot descriptors. - Recheck file absence and source identity before publication. Reject a request that becomes ready during capture. - Cover cold filesystem loss, real sandbox-side Git acquisition, and eleven blocked states. Document the preservation contract. ## Verification - Red: the new real PostgreSQL/filesystem regression fails on the unchanged importer with `repository_preparation_unresolved`. - Green: both affected migration/lifecycle suites pass, **236 tests**. The cold test deletes the predecessor directory, restores saved bytes, and acquires the pending repository through the full admission owner, checking ready state and the pinned commit. Real Git runs against a local HTTP origin through an exact-URL redirect at the sandbox transport boundary. It does not claim live Daytona or GitHub qualification. - Full workspace typecheck and build pass at the final head. Both affected suites pass **236 tests**, including the full admission owner and eleven blocked states. All final-head CI checks pass: **54 success, 2 skipped, 1 neutral**. Greptile is **5/5**, with no unresolved review threads. - The full local test command failed in `recovers lost inline and check responses without duplicate GitHub publications` in the chat integration suite. That exact case passes in a fresh isolated invocation. Its cause remains unclassified; this is not a full-local-suite pass claim. The original failure is retained alongside the isolated result. - No candidate code has been applied to the serving instance. ## Risks - The exception applies only to offline migration and a pending request with no target, commit, branch or failure. Unreadable paths, symlinks, partial directories and active/repair states retain their blockers. - Requests retain normal repository authorization and acquisition behavior. This change neither fetches repositories during migration nor marks requests ready. - A changed materialized source aborts publication and leaves original files intact. ## Model Used OpenAI GPT-6 through Codex, with reasoning and tool use. The exact deployment variant and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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21d2a577bb |
feat: show and change routine responsible users (#19128)
## Thinking Path > - Paperclip helps people manage AI agents and their work. > - Routines create tasks for repeated work. > - Each routine has a responsible person. > - The Overview did not show this person or permit a change. > - People need to see who will be responsible for automatic tasks. > - This pull request adds a small name picker beside Default agent. > - Authorized people can adopt a routine or transfer it to an active company member. ## Linked Issues or Issue Description **What existing behavior does this improve?** The routine Overview and the routine update API. **Subsystem affected** UI, server, and shared contracts. **Current behavior** The routine stores a responsible user. The Overview does not show that person. The update API cannot change that person. **Proposed behavior** Show Responsible user beside Default agent. Click the name to search active company members. Save only the new person and the current revision ID. **Reason and benefit** People can see who owns future automatic tasks. An authorized person can adopt a routine without making a new routine. **Breaking changes** The detail response adds an optional actor-specific field. The update API adds an optional responsible user ID. Existing requests keep their current behavior. Related: #17368 covers local Board ownership migration. This change adds the routine control and explicit transfer. ## What Changed - Show a quiet, searchable person picker beside Default agent. - Explain that automatic tasks use this person. Manual runs use the person who starts them. - Permit human operators with `tasks:assign`, instance administrators, and local operators to transfer responsibility. - Check active company membership inside the update transaction. - Save a revision and record the old and new person in the activity log. - Keep existing task responsibility and ownership during revision restore. - Show errors for failed saves and stale revisions. - Add tests for permissions, company boundaries, transfers, inheritance, and picker states. - Keep the picker disabled until saved data is refreshed. Refresh the activity list after a transfer. - Capture the actual previous person under the update row lock for the activity record. - Use shared query error handling and retain cached people during a connection failure. ## Verification - Focused checks cover 145 tests in 5 files. The first post-fix run passed 144 tests. One existing Fireflies route test timed out during the first import while the UI typecheck also ran. The same test passed in the pre-fix run. The isolated route suite then passed all 21 tests with no source change. - The new tests reproduce slow detail refreshes, activity refresh, and two concurrent transfers without a base revision. The concurrency test uses PostgreSQL row locks. - UI and server TypeScript checks passed at commit `1df9587eb`. - The UI production build passed for the updated head. - The branch includes master through `26391707f`. - Design token gates, query-error policy, and Git whitespace checks passed. The query-error policy reports zero findings. - Local browser checks passed on desktop and mobile for the initial feature commit. Search, selection, reload persistence, and revision creation passed. No page errors or horizontal overflow were found. The follow-up does not change the normal layout. - Earlier full local checks could not finish: Cargo was absent, and concurrent full test/build checks exceeded the 8 GiB memory limit. These attempts are not passes. - The first CI run failed on two error-rendering policy findings. That failure is fixed locally. The three findings from the first Greptile review are fixed and their threads are resolved. - Greptile reviewed `1df9587eb2d3e034c2769b1f6955ac52323c95bb` and scored it 5/5. It confirms all three prior findings are addressed. There are no open review threads. - [CI attempt 1](https://github.com/paperclipai/paperclip/actions/runs/42046369415/attempts/1) passed 53 checks. The server 8/12 shard failed only because the existing `history-http` runtime fixture did not become ready within 10 seconds (99 refused connections). The fixture and runtime source are unchanged from the merged master. That case passed locally on the same PR head with no source change. Its full 75-test suite also passed locally. The cause of the CI failure remains unknown. - [CI attempt 2](https://github.com/paperclipai/paperclip/actions/runs/42046369415/attempts/2) passed on `1df9587eb`: 54 successful checks, 3 skipped, and 1 neutral. No failed or pending checks remained. The original fixture-readiness failure remains recorded above. - A later review found that viewers with an explicit `tasks:assign` grant could see an editable picker even though writes were denied. Commit `8b95ee707` now mirrors active-membership and viewer restrictions in the GET capability flag. Instance-admin and local-operator behavior is preserved. - Three membership regressions failed on the incorrect editable flag before the fix. After the fix, all 43 routine-route and company-access cases passed (`--testTimeout 60000` accommodated this sandbox's cold route imports; no repository timeout was changed). The first pre-fix run timed out during the cold import in one case; the second pre-fix run reproduced all three assertion failures. - Layered server typechecking and whitespace checks passed after the permission fix. - [Fresh CI](https://github.com/paperclipai/paperclip/actions/runs/42057752313) passed on `8b95ee7075417527687b4a86cbaf63ba87408364` without a retry. Greptile reviewed this exact head, scored it 5/5, and added no new findings. All four review threads are resolved. The security status is also successful. - The separate Paperclip Review check is still queued because its assigned review worker requires runtime recovery. This is the remaining check before completion; the CI workflow itself passed. ## Risks - A transfer changes the person used for future automatic tasks. Existing tasks keep their current person. - Only people can transfer responsibility. The server checks the permission again on every write. - A stale revision rejects the save. The user must reload before retrying. - No database migration is required. ## Model Used OpenAI Codex, based on GPT-6, with reasoning, tool use, and code execution. The exact runtime model ID and context window are not exposed to this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green (CI passed; separate Paperclip Review check pending) - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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253bf071f0 |
fix(workspaces): preserve resolved pending merges in snapshots (#19429)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Task workspaces must survive replacement of the web server. > - Workspace snapshots therefore preserve both files and portable Git state. > - A resolved merge can still await its merge commit. > - The archive rejected this state, so an existing workspace could not migrate. > - This pull request saves and checks the complete supported merge state. > - The benefit is that migration preserves the user's choice to continue or abort the merge. ## Linked Issues or Issue Description **What happened?** A legacy workspace contained a resolved merge with `MERGE_HEAD`, `MERGE_MODE`, `MERGE_MSG`, `ORIG_HEAD`, and `AUTO_MERGE`. Its index had no unresolved entries. The snapshot owner refused the operation. This kept the original safe but blocked migration. **Expected behavior** Save this supported state without changing the source. Restore it without the original repository, borrowed object store, or linked worktree. Retain the merge parents, selected index, later edits, and Git's normal safety checks. **Steps to reproduce** 1. Merge two branches that conflict. 2. Resolve and stage the conflict. Leave the merge uncommitted. 3. Capture the workspace. The base implementation rejects the merge marker. Related prior work: #19310 preserves an inactive rebase bookmark. No duplicate open merge-preservation PR was found. This is a workspace preservation fix, not a new roadmap feature. ## What Changed - Admit only resolved pending merges with valid, bounded metadata and available objects. - Retain and verify the merge mode, message, parents, original head, automatic merge tree, and index. - Verify copied metadata and object closure before publication. Keep the before/after source checks. - Keep unresolved conflicts, autostash, rerere, mixed operations, malformed state, and unsafe links blocked. - Test real ordinary, linked, and borrowed repositories through local and serialized capture. Delete all original sources before continuing or aborting the restored merge. - Document the supported state and the remaining refusal cases. ## Verification - Six new continuation cases fail against the unchanged base at the pending-operation guard. - The first candidate restored and continued the merges, but six abort assertions failed. The fixture rewrote the worktree without updating Git's index cache. It now first verifies that abort protects later edits, uses normal `git restore` to discard those fixture edits, then aborts. No archive assertion was removed. - The final archive and environment suites pass all 98 tests at `3c87d13d1b`, including linked-metadata protections and pending merges in ordinary, linked, borrowed, shallow, partial, and SHA-256 repositories. All 12 local/serialized continuation cases pass after source removal. - Full repository build and typecheck pass at `1544cc4a90`. The build first found a nullability error; an explicit rejection return fixed it. - The first full local test attempt stopped before tests ran because omitted package postinstall steps left PostgreSQL library links absent. Direct `initdb --version` reproduced the missing-library failure. Restoring the package links made that probe pass; the full test rerun is active. - The initial typecheck also found missing excluded-plugin SDK links after the same install. Running the repository postinstall link helper corrected this, and the full typecheck now passes. - All current-head CI gates pass at `3c87d13d1b`: 54 success, 2 skipped, 1 neutral. Fresh Greptile is 5/5 and no review threads remain open. - Review requested shallow and SHA-256 coverage. The current commit adds both plus partial-clone coverage; all 98 archive tests and the full server typecheck pass. - All six local chat shards pass. The monolithic local general-suite run reports one viewer-permission test failure and remains active. That exact test passes alone, and its full 505-test file also passes alone. The original failure cause is unresolved; this is not a full local-suite PASS. The complete current-head CI suite is green. ## Risks - This widens capture eligibility only for the checked resolved-merge state. No migration commits or aborts the source operation. - A missing object or changed metadata still blocks publication and retains the source. - Unresolved merges and other operation formats remain unsupported. Their preservation guard is unchanged. ## Model Used OpenAI Codex, based on GPT-6, with reasoning, repository tools, and code execution. The runtime does not expose a more specific serving model ID or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used with the available version and capability details - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have described the issue in-PR following the relevant issue template - [x] I have not referenced internal or instance-local Paperclip issues or links - [x] My branch name describes the change and contains no internal task id - [x] I have run the affected tests locally and they pass; full-suite limitations are recorded above - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented the risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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8c578668b8 |
fix(heartbeat): start new queued runs promptly after restart and name the wait (#19431)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work
> - The heartbeat queue starts queued agent turns. Restarts and deploys
happen often.
> - After a restart, new queued turns waited minutes before they
started. The task showed only "Queued", with no reason.
> - The cause is startup order. The queued-run dispatch worker registers
only after many unrelated first passes finish one after another: tool
reviews, delivery workers, the terminal workspace sweep, native restart
recovery, and residual and issue recovery.
> - The server binds its listener before this recovery, and
`/api/health` answers during it. A deployment can route traffic to the
new server for minutes before queued work starts.
> - This pull request starts queued turns that never executed as soon as
plugin workers and adapters are loaded. It also names the wait while the
server starts, recovers, or shuts down.
> - The benefit is that tasks resume quickly after a restart and show a
visible reason while they wait.
## Linked Issues or Issue Description
**What happened?**
On a hosted instance, the server restarted twice for deploys. Both
times, queued runs on idle agents started about 3.5 to 4 minutes after
the restart. Before the restart, the runs also waited about 5 minutes
while the deploy drained the old server. During the wait after the
restart, the execution presentation showed `phase: queued`, `label:
"Queued"`, `cause: null`.
**Expected behavior**
Queued work resumes automatically and quickly after a restart. While it
waits, the task shows a reason.
**Steps to reproduce**
1. Start a task drain (`POST /api/instance/task-drain`). Assign issues
to idle agents. The runs stay queued.
2. Stop the server (SIGTERM) and start it again.
3. Make any startup first pass slow (a large instance does this
naturally). Queued runs start only after every earlier startup pass
finishes.
**Paperclip version or commit**
master at
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140fcf98ed |
fix(retry): name a declined task Retry and let a new click replace it (#19426)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - A task interrupted by a restart or deploy must resume automatically, or offer a Retry that works on first use > - A board Retry saves an intent first. Dispatch then rechecks the requester's authority and saved source before it starts a run > - When that recheck refused the intent, dispatch returned a bare "deferred". The intent stayed saved with no reason, and the task still showed Retry > - Each later click with a new key joined that same intent, so Retry returned 202 and never started a run > - This pull request names the refusal on the intent and lets a new click replace an intent that can never start > - The benefit is that a Retry button that is shown starts one run, or explains why it cannot ## Linked Issues or Issue Description **What happened?** A native task in a managed sandbox lost its runner twice. Saved-work recovery recovered the files. The task showed "Saved work recovered. Retry or send a message to continue." and `canRetry: true`. A Retry click returned 202 and logged `issue.retry_requested`, but no run started. A second click with a new idempotency key returned the same request ID and `state: failed`. No run started. **Expected behavior** If Retry is offered, a click starts exactly one run. If the Retry cannot start, the task names the reason, and a later click is a fresh attempt. A Retry accepted during the pre-deploy drain starts after the restart. **Steps to reproduce** 1. Recover the files of a failed native run so the hold offers Retry. 2. Save a Retry intent whose dispatch-time authority recheck fails (for example, the requester lost access). 3. Dispatch it: no run starts, and the intent has no wait reason. 4. Click Retry again with a new key: the response returns the first request ID, and no run starts. **Paperclip version or commit** Reproduced on `b400914345` (staging served `4d49a31286`; the affected code is the same). Related: #19399 (automatic Retry after a lost runner), #19422. ## What Changed - `heartbeat/queue.ts`: when dispatch declines a task Retry because the requester can no longer change the task, or its saved board message changed, record a named wait (`retry_authority_denied`, `retry_source_changed`) and log it. Before, it returned "deferred" with no record. - `task-retry.ts`: a new click with a new key replaces an unadmitted intent that dispatch declined for its requester's access (`retry_authority_denied`). The old intent becomes `skipped` / `task_retry_replaced`, and activity records `replacedRequestId`. Waits on shared state (cleanup, recovery, an active run, preservation) still coalesce. The restart hook never replaces a user's click. Chat-owned intents keep their own owner. - `task-interruption-presentation.ts`: fixed public messages for the two new wait reasons. `retry_authority_denied` keeps Retry, because a new click is a fresh attempt. `retry_source_changed` is terminal: an edited saved message cannot be replayed, so Retry is hidden and the user sends a new message. - `doc/execution-semantics.md`: document the rule. ## Verification - New regressions in `server/src/services/workspace-recovery.test.ts` use the real recovery, Retry and dispatch services on embedded Postgres. The fixture runs the automatic Retry from a lost runner, then that Retry's own run loses its runner, and recovery saves its files: - `starts exactly one run when Retry is pressed after the automatic Retry's own run lost its runner` (also checks that a replayed dispatch and a second click start no second run). - `does not let a Retry that could not start swallow a later Retry`: red before the fix in two steps. With no fix, the declined intent has no wait reason. With only the wait fix, the second click returned the first request ID. Green after the fix: one run, bound to the second click. - `dispatches a Retry accepted during the pre-deploy drain once the restarted server resumes`: green before and after. The drain does not lose a saved Retry. - `npx vitest run src/services/workspace-recovery.test.ts src/services/task-retry.test.ts src/services/task-interruption-presentation.test.ts src/services/quarantined-task-retry.test.ts src/services/explicit-native-continuation.test.ts`: 892 passed. - Not verified on staging. After deploy, an intent that dispatch refuses shows a named `retryWait` reason. ## Risks - Low risk. Only intents that dispatch declined for their requester's access are replaced. All other coalescing stays. - A replaced intent's late dispatch finds it `skipped` and starts nothing, so a double click still starts at most one run. - The exact gate that held the staging intent is not confirmed from records. If it was a shared-state wait, the new code names it only if it is one of the two reasons above. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, through Claude Code with tool use (shell, file edits, local test runs). ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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7e3caa7bac |
fix(tree-control): resume work a pause gate refused after release (#19421)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work.
> - The board can pause an issue tree. A pause stops work. Resume or
release must continue that work once.
> - PR #19394 made release re-dispatch a run that a pause Stop
cancelled.
> - That rule covers only a run that an operator Stop ended and that the
hold snapshot named.
> - A scheduled retry that comes due during a pause is not stopped. The
dispatch gate cancels it with `issue_paused`. The release did not see it
as owed work, so the task stalled with no run.
> - This pull request makes every gate that refuses work for a pause
record the covering hold. Release then re-dispatches that work exactly
once.
> - The benefit is that a paused task with a parked retry or a queued
run continues after release, with no manual wake.
## Linked Issues or Issue Description
Refs #19394
**What happened?**
A child task had a `workspace_busy` scheduled retry. The board paused
the parent tree. The retry came due during the pause. The
scheduled-retry gate cancelled it with `issue_paused` ("Scheduled retry
suppressed because the issue is held by an active subtree pause hold").
The board released the hold. Four minutes later the child was still
`in_progress` with no run, no execution blocker, and no new activity.
**Expected behavior**
Release (or `mode: "resume"`) re-dispatches the refused work exactly
once. No reconciliation and no user message are necessary.
Stranded-issue recovery does not add a second run.
**Steps to reproduce**
1. Give an assigned child task a parked `workspace_busy` scheduled
retry.
2. Pause the parent tree.
3. Let the retry come due while the pause is active. The gate cancels it
with `issue_paused`.
4. Release the pause. No run starts for the child.
**Paperclip version or commit**
master at
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bf53060904 |
fix(recovery): continue saved input after verified workspace copy-back (#19422)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Native execution preserves accepted results and task files after a failure. > - A later user message can request a new turn after the old execution stops. > - File recovery can finish by copying files back or by retaining a verified archive. > - The retained-result gate accepted the archive proof but missed a verified copy-back receipt. > - This change accepts that existing receipt for terminal failures and preserves execution authority and prior results. ## Linked Issues or Issue Description **What happened?** A task keeps a user message queued with `finalizing_saved_result` after its old native coordinator reached `terminal_failure`. The accepted result and a successful, exact `workspace_recovery` copy-back receipt are saved. The gate only checks the alternate `workspace_recovery_snapshot` receipt. An older failed result can also keep a newer failed turn's saved input blocked. **Expected behavior** A new user message or deliberate task Retry can continue from verified recovered files after the old execution stops. Preserve the old result and unknown action outcomes. Keep an active finalizer or missing stop evidence blocked. **Steps to reproduce** 1. Retain an accepted result when a native run reaches terminal failure. 2. Complete host copy-back with the exact run, allocation, descriptor and final file digest. 3. Save a new user message or request task Retry. 4. Observe that admission still reports `finalizing_saved_result`. **Paperclip version or commit** Reproduced against `4d49a3128613b282fb344272ed7ca15f98dea2ac`. **Deployment mode** Authenticated native execution with retained workspace recovery. Local regressions use disposable PostgreSQL and the real heartbeat queue. They start no model provider or sandbox. Related work: #19355 covers saved input after Stop. #18267 concerns manual reconciliation of duplicate legacy holds; it excludes workspace and system recovery and does not fix this receipt gate. I searched open PRs and issues before starting this change. ## What Changed - Reuse the existing host-verified repair receipt when an accepted result belongs to a coordinator in `terminal_failure`. - Retain the separate checks for active controllers, environment termination, live executions, questions, approvals and current user authority. - Add message, saved-message and task Retry regressions, plus concurrent queue delivery and invalid-receipt cases. - Document this continuation path. Add no schema, API or background worker. ## Verification - All 483 tests pass across explicit continuation, task Retry, quarantined Retry and finalized recovery migration suites. - The final focused fixture has 17 cases. All pass with the change. With the original production gate restored, all four positive cases fail and all 13 safety cases pass. - Negative cases cover missing, unfinished and mismatched receipts, another task or source, unrecovered files, a live finalizer, an active controller, missing remote stop and active execution. - The real heartbeat path delivers one saved message under concurrent recovery calls. Later recovery calls create no second turn. The old accepted result and recovery budget stay unchanged; unknown outcomes stay unknown. - The first delivery fixture omitted the newer failed source needed by the recovery scanner. I corrected the fixture to preserve that history and repeated the unchanged-code comparison. Earlier failure logs remain in the verification record. - `pnpm -r typecheck`: passed. - `node scripts/check-module-boundaries.mjs` and `git diff --check`: passed. - `pnpm build`: passed. - Full local `pnpm test:run`: running with a 20-minute bound; no full-suite pass is claimed. All hosted CI checks passed. Greptile scored the exact head `d04fb98892fd77853ad03e6b44cd612e805abc13` 5/5 with no findings or review threads. - Hosted delivery of the already saved input still requires a qualified staging build containing this change. ## Risks The new path requires the existing exact repair receipt and a terminal failure. A coordinator still accepting or committing a result keeps the previous hold. Stop, owner and live-run checks still run before admission. The old result is neither applied nor replayed. Receipt verification adds bounded indexed reads only on this retained-result failure path. No migration or provider configuration changes are required. ## Model Used OpenAI GPT-6.1 Sol (`gpt-6.1-sol`) through Codex in T3 Code, with xhigh reasoning. The context-window size is not exposed. Used code editing, tool calls and local test execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used, including the available runtime details - [x] I have checked ROADMAP.md and confirmed this is a scoped bug fix - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have described the issue in this PR using the bug-report fields - [x] I have not referenced internal or instance-local Paperclip issues or links - [x] My branch name describes the change and contains no internal task id - [x] I have run the affected tests locally and they pass - [x] I have added regression tests and updated relevant documentation - [x] I have considered and documented the risks - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open findings - [x] I will address all review findings before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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11bc490cda |
fix(recovery): keep a stopped copy-back's files instead of holding the workspace (#19385)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - A native run can have its result accepted before the copy-back of its sandbox files finishes. If the copy-back fails, it retries. > - A board Stop during those retries ends the run. It sets the run's finalization to `terminal_failure` / `native_retry_cancelled`, and the result stays accepted. > - After that, nothing exports the files. The finalization worker skips terminal rows, and cancelled-workspace preservation skipped any run with an accepted result. > - The task workspace stays dirty and bound to the stopped run. Every later run on the task waits for the workspace, then fails setup with the unfinished-writer error. > - This pull request lets cancelled-workspace preservation also admit an accepted result whose copy-back a Stop ended. > - The benefit is that stopping a stuck copy-back saves its files and frees the task, like stopping any other run. ## Linked Issues or Issue Description Refs #16700, #17677, #18820, #19304 and #19305 (cancelled-workspace preservation). This pull request adds the accepted-result case to that path and keeps its other checks unchanged. **What happened?** On a hosted instance, a native run's result was accepted, but its copy-back kept failing and retrying. A board operator pressed Stop to unblock the task. The run became `cancelled`, its sandbox was stopped and kept, and its finalization moved to `terminal_failure` / `native_retry_cancelled` with the result still accepted. The next run on the task was cancelled with "Shared execution workspace is busy: run … ended, but its workspace save has not settled". About 24 automatic retries followed over an hour. The last one failed with "The workspace still has an unfinished writer or save operation." After that nothing ran: the task stayed `in_progress` with no run and no recovery action. A Retry or a new comment would hit the same block. The workspace stayed `dirty: true` with the stopped run as its writer, and no `workspaceRestoreRecovery` was ever recorded. The reason: `preserveCancelledNativeWorkspaces` requires `resultId IS NULL`, and `registerCancelledWorkspacePreservationWork` and `preserveNativeFailedWorkspace` both return early when `resultId` is set. **Expected behavior** Stopping a run during its copy-back retries keeps its files, as stopping any other run does. Paperclip's workspace recovery saves them and releases the workspace. Nothing commits or replays the stopped result. **Steps to reproduce** 1. Accept a native result for a run whose copy-back is in `retryable_failure`. 2. Stop the run with the board Stop. The finalization becomes `terminal_failure` / `native_retry_cancelled`. 3. Start another run on the task. It waits for the workspace and then fails setup. No save of the stopped run's files is ever recorded. The new database tests run steps 1 and 2 against PostgreSQL and check that the save is recorded. **Paperclip version or commit** `master` at `9ceaec6f97e`. **Deployment mode** Any deployment that uses remote (sandbox) task workspaces. Seen on a cloud-managed instance. ## What Changed - `server/src/services/native-runtime/native-failed-workspace-recovery.ts`: cancelled-workspace preservation now also admits an accepted result when the finalization is `terminal_failure` with `native_retry_cancelled`. That is the state a Stop leaves after ending copy-back retries. All three entry points use the same rule: - the startup scan `preserveCancelledNativeWorkspaces`; - the worker `registerCancelledWorkspacePreservationWork`; - `preserveNativeFailedWorkspace`, only when it is called with `requireCancelledStop`. Preservation still requires everything it required before: a cancelled run, an acknowledged Stop, no live finalization owner or controller lease, a prepared workspace reference, and the exact retained source. - An accepted result with any other failure code is still skipped; those runs keep their own export repair path. Failed (not cancelled) runs are unchanged. - The accepted result stays recorded and uncommitted. Preservation does not change the task's status or queue a run. - `doc/execution-semantics.md`: describe the stopped copy-back case in the paragraph on writers stopped mid-run. - `native-cancelled-workspace-preservation.test.ts`: move the accepted-result fixture into an `acceptResult` helper, and add a test with three cases. ## Verification - Failing first. The new test "preserves files of an accepted result whose copy-back was stopped" has three cases: worker, startup scan, and a sandbox that the Stop already stopped and kept, through the real `prepareSandboxStopAndRetain` and `settleStopOnlyCleanup`. All three fail on `master`, with no `workspaceRestoreFailure` recorded, and pass with this change. - Each case checks that: - the save obligation and recovery action are recorded for the exact lease; - `inspectWorkspaceRecoverySource` finds one source; - the finalization keeps its `resultId`, `terminal_failure` and `native_retry_cancelled`; - the workspace stays held by the stopped writer until the save publishes; - no run or wake is created, and the task status is unchanged. - The existing "does not admit preservation for accepted-result" case still passes. It uses an accepted result with a different failure code. - `cd server && npx vitest run src/services/native-runtime/native-cancelled-workspace-preservation.test.ts`: 44 passed. - Related suites, 10 files and 854 passed: - `native-failed-workspace-recovery`, `workspace-recovery`, `heartbeat/run-control` - `native-cancellation-request` (unit and integration) - `heartbeat-remote-workspace-busy`, `native-workspace-export-retry`, `native-workspace-reconstruction` - `native-stop-accounting`, `task-workspace-binding` - `cd server && npx tsc --noEmit -p tsconfig.json`: pass. - Not run end to end on a live instance. Diagnosed from that instance's run, finalization, lease, workspace and recovery-action rows. ## Risks - On deploy, the startup scan and the worker will pick up existing cancelled runs in this state and record their saves. That is the intended repair, and it uses the same retention checks as other stopped writers. - A copy-back interrupted by a server restart can leave a `remote_workspace_snapshot` operation marked `running` after its process is gone. This change does not settle such rows. If one blocks the later save, the save follows its existing retry and board hand-off. - No schema migration. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`) through Claude Code, with tool use (shell, file edits, test runs, read-only database queries). The runtime does not expose the context window or reasoning configuration. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [ ] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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c1d567ff6a |
fix(workspaces): isolate archived nested Git reconstruction (#19409)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Durable workspace import must preserve archived task files and Git history. > - A saved nested checkout can be a linked worktree whose branch belongs to its old absolute path. > - Archived import reconstructs that checkout in a new scratch directory. > - Ordinary linked recovery rejects the old branch at that new path. It can also write into a cache used by other import workers. > - This pull request reconstructs archived nested checkouts as private standalone repositories. > - Each import preserves saved files and extra history without changing shared worktree registrations or branches. ## Linked Issues or Issue Description **What happened?** Archived workspace import fails when a saved nested linked checkout has a branch owned by the old path. The new scratch path fails the linked-worktree ownership check. The existing cache lock is process-local, so separate import processes also share mutable Git state without a common lock. **Expected behavior** Archived import must create an independent portable copy of the saved checkout. It must retain the saved commit, branch name, staged edits, working files, ignored recovery files, settings, and extra saved commits. It must keep the source cache unchanged and enforce source authorization. **Steps to reproduce** 1. Create a managed nested linked checkout with an unpushed commit and staged and unstaged edits. 2. Save an encrypted restore point, including ignored files and an extra history tip. 3. Restore its saved contents under a different absolute workspace path. 4. Before this repair, the new path cannot adopt the branch owned by the old path. **Paperclip version or commit** The real Git regression fails before the repair at `fc1f5f3052`. The final branch includes the merged interrupted-upload and nested-source authorization fix from #19396. **Deployment mode** Archived remote workspace migration with real Git repositories, disposable PostgreSQL, and encrypted object storage. Local integration tests use the filesystem storage provider. Builds on merged #19402 and #19396. Related #19374 concerns interrupted clone staging; it does not implement private archived reconstruction. No duplicate open repair was found. ## What Changed - Enable private repository reconstruction only for archived migration. Ordinary linked recovery keeps its path ownership guard. - Add an object-only source to the managed checkout owner. A verified cache supplies only the saved commit and authenticated bundle prerequisites through scoped fetches. The private copy includes no unrelated task refs or objects, hard links, object alternates, or current cache files. - Fetch missing authenticated bundle prerequisites before importing a saved bundle in both private reconstruction and ordinary linked recovery. A pruned cache can use the approved remote; unavailable history still blocks restore. - Keep every authenticated restore point's extra commit under a private ref in root and nested private copies so portable archive capture and garbage collection retain it. Ordinary recovery keeps its existing history and expiration rules. - Share the verified, bounded ignore-file copy between root and nested reconstruction. Sources remain unchanged. - Retain source authorization before and after reconstruction and the final source-row locks from #19396. - Test concurrent private copies, source rejection, foreign task refs and objects, ordinary linked prerequisite recovery, a real migration, and cold restore after removing all original repositories. Test hard links, oversized excludes, unsafe info paths, and replacement during a descriptor read. ## Verification - Final affected run: 292 tests pass across ten suites. These cover real Git repositories, encrypted restore points, disposable PostgreSQL migration, portable archives, the restore-point ledger, source rejection, and concurrent copies. - Full repository typecheck and build pass after the scoped-object repair. Final server typecheck and full build also pass after restricting preserved refs to archive mode. - RED then GREEN: a linked checkout at a different path; a pruned bundle prerequisite still available from the approved remote; foreign task refs and objects entering the archive; root extra history disappearing after cold restore; and archive-only refs blocking ordinary standalone expiration. - Two concurrent private copies retain the saved head, branch, staged and unstaged edits, ignored recovery bytes, settings, and modes. Source refs, index, worktree registrations, and working files remain unchanged. - Delete the original checkout, cache, remote, and private copies after portable capture. Cold restore retains the saved files and extra history after garbage collection. No alternates or unrelated task objects remain. - Ordinary linked recovery retains its path ownership check and recovers pruned prerequisites. New and existing ordinary standalone destinations have no archive-only refs and remain eligible for expiration after normal object cleanup. - Unsafe exclude tests reject hard links, oversized files, nonregular paths, info-directory substitution, and replacement during the descriptor read. They preserve the target and replacement source bytes. - Preserve the failed attempts: an initial migration fixture changed its home after constructing the source path. Later expiration fixture attempts used a filtered current-head tip, omitted the local-source callback, or used cleanup that generated Git server-info files or left packed unreachable objects. Correct those setup assumptions before the actual regressions fail. Final affected suites pass. - Two earlier local full-suite attempts were interrupted before editing valid review findings. Neither is reported as a full-suite PASS. Final-head full CI passes; review is 5/5 with no open findings. ## Risks Archived imports use additional private disk space for independent Git objects. Missing, changed, or unsafe sources still block import. The repair does not weaken the default linked-worktree ownership check, change stored formats, or update live provider state. The shared checkout addition is optional and has no effect for existing callers that do not supply an object source. ## Model Used OpenAI GPT-6 in Codex, with code editing, tool use, and test execution. The exact runtime model identifier and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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90b8190c33 |
fix(native-runtime): detect half-open runner ingress and project Stop for live runs (#19407)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Native runs in a managed sandbox talk to the server through a provider-ingress WebSocket. The server opens this socket to the runner (`paperclip-runnerd`) through the sandbox preview proxy. > - A staging run ran a 20-minute foreground shell command that printed nothing. After the first second, no run events arrived. The run stayed "Working" for over 35 minutes. No watchdog acted, and the run projection said `canStop: false`. > - The server only detected a lost runner connection from a `close` or `error` event. It never sent pings. A half-open route, for example a proxy that drops the connection without a FIN, never emits `close`. The run then waits forever and the 7-minute reconnect grace never starts. > - A long silent tool call is legitimate. The fix must tell "quiet but alive" apart from "nothing alive". A protocol ping does that: runnerd answers every ping with a pong while its provider waits on the tool. > - This pull request pings authenticated runner connections and terminates the socket after 90 seconds of total silence. The existing reconnect grace and transport-failure path then recover the run. It also makes the execution projection report `canStop: true` for every queued or running run. > - The benefit is that a run with a dead runner connection now ends in a bounded time instead of hanging. API readers also see the Stop that the board already offers. ## Linked Issues or Issue Description **What happened?** A native-runner run (managed sandbox, OpenCode with an OpenRouter model) ran a foreground shell command for about 20 minutes with no output. The last run event came at about T+1s. The command finished on disk, but the run never got another event and stayed `running` / "Working" for over 35 minutes. Its projection had `canStop: false` and `permittedActions: ["inspect_run"]`. A board cancel through the API worked. **Expected behavior** The server detects a dead runner connection and recovers or fails the run in a bounded time. A runner that is alive but quiet stays attached. The projection reports that a live run can be stopped. **Steps to reproduce** 1. Start a native run in a managed sandbox. 2. Make the agent run a long foreground command that prints nothing. 3. Let the preview route drop the WebSocket without a close frame. 4. Before this fix, the run stays "Working" forever. ## What Changed - `server/src/realtime/runner-prp-outbound.ts`: after PRP authentication, `WsJsonWireConnection.monitorLiveness` sends a WebSocket ping every 20 s. Any inbound frame or pong counts as liveness. After 90 s with nothing inbound, it terminates the socket. That emits an ordinary `close`, so the PRP authority and the reconnect loop use the existing 7-minute grace and then fail the transport. If the server's own event loop stalls, the window restarts instead of blaming the runner. The 90 s bound is longer than runnerd's own 60 s connection lease, which already requires runnerd to read the socket. - `server/src/services/execution-projection.ts`: `canStop` is now `true` for every `queued` or `running` run. The old failed-native-retry rule is unchanged. - `server/src/services/execution-projection.ts`: a queued run now shows "Waiting for previous run to stop" (cause `previous_run_settling`) when a predecessor that admission checks (the task execution owner, the retried run, or the agent's latest settled run on the task) still has pending cleanup by `hasPendingRunCleanup`. Before, a turn queued after a Stop showed only "Queued" with no reason while the stopped run's controller still waited on the dead runner. That in-process wait (`claimQueuedRun` settling-owner gate) also made Retry a no-op. The liveness bound above makes that controller settle. Its existing cleanup then calls `startNextQueuedRunForAgent`, which starts the queued turn. - `server/src/services/run-cancellation.ts` and `server/src/modules/run-dispatch/adapters/postgres.ts`: a user-stopped native run whose runner was unreachable can later settle as `failed` (`native_provider_terminal_failed`) when its transport fails closed. The dispatch gate's message deferral required a `cancelled` source and compared the message with `finishedAt`. The user's follow-up message was therefore marked `skipped`, and the task asked for a second message. The new `recordedUserStop` helper honors the recorded user Stop on such a failed source, so the gate saves the message for the deferred-receipt worker. - `packages/shared/src/types/execution-projection.ts`: documents the `canStop` meaning. - `doc/execution-semantics.md`: documents the ingress liveness bound and the new `canStop` meaning. ## Verification - Red then green: `runner-prp-outbound.test.ts` "detects a half-open authenticated ingress and fails the run within a bounded window". On the old code it failed because no ping was sent and the socket was never terminated. It now passes and the active-run `failure` rejects with `runner_ingress_unavailable`. - Safety: "keeps a quiet but live runner attached through a long silent tool call" checks that a runner answering pings stays attached for 20 simulated minutes with no termination and no failure. - Red then green: `execution-projection.test.ts` "offers Stop for every live run, including a long-silent native turn". On the old code it failed with `canStop: false`. - Red then green: `execution-projection-recovery.test.ts` "names the wait when a stopped predecessor still holds the task's runner" (real Postgres). On the old code the successor projected a plain "Queued". It also checks that the wait clears on lease release and ignores another agent's run. - Red then green: `workspace-recovery.test.ts` "continues a message sent after Stop when the stopped run later failed closed". On the old code it failed 3 of 3 runs with the receipt `skipped`. It now passes, and the full file passes twice (392 tests). The test now pins the message after the recorded Stop. Before, the fixture could write both in the same millisecond, which made the sibling variants flaky. - Passed: run-cancellation, explicit-native-continuation, run-dispatch and run-control suites (622 tests). - Passed: `npx vitest run src/realtime/ src/services/execution-projection*.test.ts src/__tests__/heartbeat-run-privacy-routes.test.ts`, the native-runner-execution-driver tests, and the plugin-runner-task tests. - Passed: `pnpm --filter @paperclipai/server typecheck`. - I read runnerd (`runner-core/src/durable/transport.rs`) and confirmed it answers `Ping` with `Pong` in its non-blocking read loop. - Not run: a live managed-sandbox reproduction. Staging and Daytona were not reachable from this environment. `plugin-runner-probe.test.ts` needs a local cargo build of runnerd, and it did not start in this worktree. ## Risks - A false termination is possible if a runner fails to answer pings for 90 s while it is still alive. runnerd already loses its own connection lease after 60 s without reading, so this bound does not add a stricter requirement. A terminated live runner reconnects within the existing grace. - If the preview proxy drops WebSocket control frames, ping alone does not prove liveness. Inbound PRP frames (runnerd's lease renewals, about every 30 s) still count, so a live runner stays attached. - `canStop` now means "the board can Stop now" for live runs. The UI already shows Stop for running and queued runs without reading this hint, so the UI does not change. - Out of scope: the inbound runner WebSocket server (`runner-prp-ws.ts`), and a lost OpenCode SSE event while the runner is alive. A stopped run whose controller hangs for a reason other than a dead transport still holds the queued successor. The projection now names that wait, but this PR does not force-release it, because the controller has no termination evidence. A queued reason for the agent concurrency cap is also not covered. The wait label calls the admission predicate (`hasPendingRunCleanup`) for up to three predecessor runs per queued run. This adds a few reads to projections of queued runs only. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, with tool use (shell, file edits) in Claude Code. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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92452524f4 |
fix(server): recover authenticated empty retention checkpoints (#19417)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Ephemeral server enrollment must preserve existing task files. > - Archived task directories can depend on encrypted retention checkpoints. > - A missing object blocks migration even when its authenticated contents were exactly empty. > - Metadata counters alone cannot prove that no saved files existed. > - This change verifies the exact candidate against the original encrypted key envelope before normal migration publication. > - The benefit is lossless migration of this bounded case without resetting task history or weakening ordinary restore. ## Linked Issues or Issue Description **What happened?** Migration stops at an archived empty directory when its retained encrypted object is missing. The original encrypted key envelope still authenticates the payload hash, byte length, company, workspace, checkpoint ID, and generation. **Expected behavior** Administrative migration can reconstruct those exact original bytes when storage confirms absence and every authenticated check passes. It must keep missing nonempty, expired, corrupt, or ambiguous sources blocked. **Steps to reproduce** 1. Capture and encrypt an empty task directory. 2. Retain its reference and encrypted key envelope. 3. Remove the old directory and storage object. 4. Run the normal remote workspace migration. **Paperclip version or commit** The regression fails before this change at `205ffcb606`. Related preservation work is in #19396, #19402, and #19409. No duplicate open fix was found. **Deployment mode** Administrative migration to external workspace storage. Tests use real encryption, real filesystem storage, and disposable PostgreSQL. ## What Changed - Let the encryption owner verify a candidate against the existing scoped encrypted key envelope. Normal ciphertext validation keeps its previous order and checks. - Share the task-directory encoder with an exact empty payload constructor. - Add a default-off loader option for confirmed missing empty checkpoints. Only the administrative migration caller enables it. - Keep the original checkpoint reference and object unchanged. Publish the recovered bytes through the existing snapshot and source-fence owners. - Reject forged counters, wrong identities, missing nonempty data, present corruption, unreadable present objects, unknown absence, and expiry. ## Verification - Final affected run: all 238 tests pass across five crypto, snapshot, retention, and migration suites. Full repository typecheck and build pass; server typecheck and full build also pass after the cancellation repair. - RED then GREEN: exact missing-empty recovery and cancellation of a stalled HEAD through the real storage-service boundary. Cancellation retains the caller's original abort reason. - Disposable PostgreSQL migration publishes a cold-restorable empty archive. Archived status, task status, task binding, original reference, and the absent original source stay unchanged. Replay keeps one canonical snapshot. - Negative cases reject forged empty counters, an authenticated directory or file, every foreign identity field, expiry, present corruption, unreadable present objects, unknown absence, and missing nonempty data. Ordinary restore keeps its previous failure behavior. - Initial verification retained one new fixture-path failure after 145 passes, and a typecheck rejected the fixture's widened schema literal. Correct the fixture to use the returned staging path and its explicit reference type. The final complete affected run passes. - The new HEAD request runs only after a failed read with the administrative option enabled. It uses the existing cancellation contract and adds no polling or background work. - Final-head full CI passes; review is 5/5 with no open findings. This PR does not claim deployed enrollment or a live migration result. ## Risks Recovery requires the original valid encrypted key envelope and an exact format match. A format change or unavailable key continues to block migration. Existing ciphertext hash, size, authentication, and ordinary restore behavior remain enforced. This change has no schema, provider-session, API, or UI contract changes. ## Model Used OpenAI GPT-6 in Codex, with code editing, tool use, and test execution. The exact runtime model identifier and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub references) - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge |
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a4bb059f59 |
fix(heartbeat): retry transient sandbox provider lease refusals and explain the block (#19412)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work
> - A task runs in an execution environment. A managed sandbox
environment gets a lease from a sandbox provider (for example Daytona)
before the agent starts.
> - When the provider answered sandbox create with a temporary error
(HTTP 502), the run failed as the generic `setup_failed`.
> - `setup_failed` is the fail-closed code for unknown setup errors. It
gets no automatic retry, so the task went to `blocked` at once. The task
showed only "Couldn't finish this attempt".
> - A user had to find and press Retry. The Retry then worked, which
shows that the failure was temporary.
> - This pull request classifies temporary provider refusals during
lease acquisition from structured fields. It retries them within the
existing bounded bootstrap budget, and it explains the block when the
retries are used up.
> - The benefit is that a short provider outage no longer stops a task.
When the outage continues, the task shows the cause and a Retry that
works.
## Linked Issues or Issue Description
**What happened?**
A task was assigned to an agent that uses a managed Daytona sandbox
environment. Sandbox creation returned `HTTP 502`, and the cleanup of
the provisional sandbox could not be confirmed. The run failed with
`setup_failed` and the error `Failed to acquire lease for environment
"Paperclip Sandbox" (sandbox): Daytona sandbox creation failed (HTTP
502); cleanup could not be confirmed for paperclip-create-…`. Three
seconds later the task was `blocked`. No automatic retry was scheduled.
The task showed no specific reason. A manual Retry started a new run
that completed normally.
**Expected behavior**
A temporary provider error (HTTP 5xx, 429, timeout) before the agent
starts must retry automatically with bounded backoff. The task must show
why it waits. If the retries are used up, the task must show the cause,
a next action, and a Retry that works on the first click.
**Steps to reproduce**
1. Configure an agent with a sandbox environment.
2. Make the provider return HTTP 502 on sandbox create.
3. Assign a task to the agent.
4. See that the run fails with `setup_failed` and the task goes to
`blocked` with no retry.
**Paperclip version or commit**
`master` at `612da1e8e0`.
## What Changed
- Plugin SDK: an `environmentAcquireLease` error now carries a closed
diagnostic envelope (HTTP status or a closed errno code) across the
worker RPC. It takes the status of the create call only, not of the
compensating cleanup lookup. The existing creation-cleanup ownership
envelope is unchanged. New module: `environment-acquire-error.ts`. The
resume diagnostic helpers are shared.
- Server: new `EnvironmentProviderUnavailableError` and code
`environment_provider_unavailable`. The environment run orchestrator
sets it as the cause of `lease_acquire_failed` only when structured
evidence shows a transient status (408, 425, 429, 500, 502, 503, 504, or
a closed connection errno). It never parses message text. Saved-sandbox
resume and stopped-worker refusals keep their own codes.
- Setup failure (`failRunSetup`): a fresh, pre-dispatch run records
`environment_provider_unavailable` with a `providerFailure` (phase
`startup`, retryability `transient`). The run uses the bounded bootstrap
retry (30 s, then 60 s). An accepted interaction continuation keeps its
own continuation retry, as for `plugin_worker_unavailable`.
- Recovery: the new code is registered with the other bootstrap codes.
It is not sent to the generic continuation retry. It does not create an
execution-reconciliation hold, because no provider work started. On
exhaustion the stranded notice has the title "Sandbox provider was
temporarily unavailable" and a specific next action.
- UI: `ProviderFailureNotice` labels the `sandbox` provider as "Sandbox
provider". The task notice shows the provider failure, "Paperclip will
retry automatically" while a retry is scheduled, and Retry after
exhaustion.
- Docs: `doc/execution-semantics.md` describes the policy and the
sandbox ownership rule.
## Verification
Red before the fix, green after the fix:
- `server/src/__tests__/heartbeat-process-recovery.test.ts` › "transient
sandbox provider refusal during lease acquisition":
- "retries automatically and runs exactly one successful successor
without user action": the real heartbeat. The lease runtime returns a
Daytona 502 once, then delegates. Before the fix: one `failed` run and
no successor. After the fix: one `scheduled_retry` successor with no
hold and a `retry_scheduled` presentation. After promotion, exactly one
successor succeeds.
- "explains the block with a working Retry once automatic retries are
used up": three refusals. The task is `blocked` with a "Sandbox provider
was temporarily unavailable" notice. The presentation is `{ state:
"failed", canRetry: true, providerFailure: { httpStatus: 502 } }`, and
no execution-reconciliation hold exists. One `requestTaskRetry` is
accepted, and its run succeeds.
- `server/src/services/heartbeat/run-completion.test.ts` › "routes a …
sandbox provider lease refusal through bounded bootstrap recovery": the
real orchestrator wrapping. Only the fresh, structured 502 is retried. A
message-only 502, a 400, a run after provider dispatch, and a retained
native run stay `setup_failed`.
- `packages/plugins/sdk/tests/environment-acquire-error.test.ts`: the
real worker RPC. The test checks the create status (not the 404 cleanup
lookup), the errno, no provider text, the unchanged cleanup envelope,
and that forged envelopes are rejected.
Commands:
```sh
pnpm --filter @paperclipai/plugin-sdk exec vitest run tests/environment-acquire-error.test.ts tests/environment-creation-cleanup.test.ts tests/environment-resume-error.test.ts
cd server && npx vitest run src/__tests__/heartbeat-process-recovery.test.ts src/services/recovery/ src/services/heartbeat/run-completion.test.ts src/services/heartbeat/retries.test.ts src/services/legacy-execution-recovery.test.ts src/services/task-interruption-presentation.test.ts src/services/task-retry.test.ts src/__tests__/environment-runtime.test.ts src/__tests__/heartbeat-retry-scheduling.test.ts
cd packages/plugins/sandbox-providers/daytona && npx vitest run
pnpm --filter @paperclipai/plugin-sdk typecheck && pnpm --filter @paperclipai/server typecheck
```
I did not run a live Daytona 502 on staging. Re-check on staging after
deploy (see Risks).
## Risks
- Sandbox leaks or double creation: each retry is a new run with a new
durable creation record and a new provider name
(`paperclip-create-<operationId>`). The failed attempt stays owned by
its own record, and the existing creation reconciler settles it. A retry
never reuses or abandons it. While a provisional sandbox waits for
reconciliation, up to two more sandboxes can be created for the same
task. This is the same as a manual Retry today.
- Plugins built with an older SDK do not send the envelope. Their
refusals stay `setup_failed`, which is the current behavior.
- An in-process error with `status`/`statusCode` 500–504 or a connection
errno during lease acquisition is now retried twice. The budget is
bounded and shared with the other bootstrap codes.
- An RPC timeout on the host side is not classified by this change.
> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.
## Model Used
- Claude Opus 5.5 (Anthropic), model ID `claude-opus-5-5`, used through
Claude Code as an agent with tool use (shell, file edits, test runs).
Extended reasoning was on.
## Checklist
- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge
🤖 Generated with [Claude Code](https://claude.com/claude-code)
---------
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
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66d3fa97a9 |
fix(workspaces): preserve ignored files in archived Git imports (#19402)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Durable workspace migration must preserve archived files and saved recovery data. > - An archived Git workspace can contain ignored recovery receipts and bundles in its encrypted restore point. > - The importer reconstructs a private repository from a verified source before it applies that restore point. > - Reconstruction omitted the source repository's local ignore rules. The restored files then changed classification, and the exact restore-point check failed. > - This pull request copies the verified local ignore rules into the private repository before restoration. > - The source stays unchanged, and the original restore-point integrity checks still apply. ## Linked Issues or Issue Description **What happened?** An archived workspace with saved files under an ignored recovery directory failed migration with `restored_contents_mismatch`. The task commit and staged index matched. The ignored files were restored, but the private repository treated them as untracked work because its `info/exclude` rules were missing. **Expected behavior** Reconstruction from an existing verified source must preserve its local ignore policy. Saved ignored files must survive migration and a cold object-store restore with their original classification. Import must not follow a symlink to an unrelated ignore file or edit the source repository. **Steps to reproduce** 1. Exclude a recovery directory in the managed source repository's `info/exclude` file. 2. Save staged edits, unstaged edits, an ignored recovery receipt, and an ignored binary bundle in an encrypted restore point. 3. Archive and remove the task worktree. 4. Import the archived workspace. Before this change, restore-point validation fails because the reconstructed repository lacks the local exclusion rule. **Paperclip version or commit** Reproduced on master at `879140cbbd`. **Deployment mode** Cloud workspace migration with a retained verified Git source, PostgreSQL, and encrypted durable object storage. The tests use real disposable PostgreSQL, Git repositories, and encrypted filesystem-backed object storage. Related migration work: #18826, #19138, and #19396. No duplicate open fix was found. ## What Changed - Copy the verified source's `info/exclude` file into the private reconstructed repository before applying its restore point. - Bound the read to one MiB. Reject symlinked, non-regular, hard-linked, or changing source files. - Keep the original source bytes unchanged. - Add regressions that check staged and unstaged edits, ignored recovery files, cold restore, and rejection of a symlinked ignore file. - Document the reconstruction behavior. ## Verification - Before the repair, the saved-ignored-files regression fails with `restored_contents_mismatch`. - After the repair, both focused cases pass. - At rebased head `81a0b1c041`, all 206 tests across migration, snapshot storage, archive, and migration concurrency suites pass. The merged interrupted-upload and nested-source approval regressions remain intact. - Server package typecheck passes. - Full repository typecheck and build pass at the rebased head. The full local test suite is running. The prior local full-test run was interrupted for rebase, and is not a passing result. - Initial CI hit a 15-second timeout in unchanged `activity-routes.test.ts`; the exact case passed in a focused local run. The browser shard lost its self-hosted runner, as confirmed by its check annotation; GitHub did not retain its full log. Those failures remain recorded. An unchanged retry was superseded by the required conflict rebase. At exact head `81a0b1c041`, all 53 CI checks and both required aggregate gates pass; Greptile is 5/5. The full local suite remains in progress, so no local full-suite PASS is claimed. A second automated review noted the existing nested-checkout counterpart. This PR fixes root reconstruction. The nested linked-checkout repair and its saved-ignored-files/cold-restore regression are implemented in #19409, which is required before the migration rollout uses nested imports. This PR leaves that sibling recovery path unchanged. The two identical scope warnings are addressed through that linked repair. ## Risks The copy applies only when an archived Git restore-point source is still present and verified. It changes only the private reconstruction directory. Missing sources retain the existing restoration path. Unsafe or unstable local ignore files block import and retain the original migration obligation. No database migration or saved format changes are included. ## Model Used OpenAI GPT-6 in Codex, with code editing, tool use, and test execution. The exact runtime model identifier and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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9668e73b4b |
fix(native): continue a turn automatically when reattachment loses its runner (#19399)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Native runs in managed sandboxes recover through reattachment: after a server restart, and for a same-run retry when a turn ends without a semantic result > - Reattachment fails closed when the original runner or sandbox is gone (`native_remote_recovery_lease_mismatch`, `runner_remote_process_identity_unavailable`) > - Saved-work recovery then saves the files, but the task stays blocked with "Saved work recovered. Send a message to continue." The recovered hold offers no Retry > - A restart, deploy or maintenance window must not need a user message to continue work > - This pull request requests the task Retry automatically, once, when it is safe, and offers Retry on the recovered hold when it is not > - The benefit is that interrupted work continues after infrastructure events, and a user who must act gets a Retry that works on first use ## Linked Issues or Issue Description **What happened?** A native task in a managed sandbox was interrupted. In one case a server restart claimed a queued user-comment turn for reattachment. In another case a turn completed without a semantic result, and the same-run retry claimed the run for reattachment with no restart. In both cases the original runner or sandbox lease was gone. The run failed with `native_remote_recovery_lease_mismatch` or `runner_remote_process_identity_unavailable`. Recovery saved the work. The task stayed `blocked` with "Saved work recovered. Send a message to continue." The execution blocker had `canRetry: false`. A manual `POST /api/issues/:id/retry` started a run that succeeded. **Expected behavior** After an infrastructure interruption, the task continues automatically when the interrupted turn's outcome is known. Otherwise the task offers a Retry that works on first use. **Steps to reproduce** 1. Start a native task in a managed sandbox from a user comment. 2. Lose the sandbox lease or the remote runner process (for example, restart the server during a maintenance window). 3. Let reattachment fail and saved-work recovery complete. 4. See that the task waits for a new message and offers no Retry on the execution blocker. **Root cause** Reattachment (`reattach_remote_runner`) correctly refuses to replace a missing runner or allocation. Nothing then continued the user's request. The automatic continuation rule only allows a new user turn after reconciliation. `getExecutionBlocker` hid Retry whenever a workspace restore hold existed, also after the files were verifiably recovered. The same-run retry path also re-enters the restart-recovery owner, so its event said "after server restart" with no restart. ## What Changed - New `server/src/services/heartbeat/restart-interrupted-turn.ts`: after a reattachment claim executes, if the run failed because its runner or allocation was lost, request the same task Retry that `POST /issues/:id/retry` creates. It runs once per run (idempotency key `restart-interrupted-turn:<runId>`), under the authority of the user who sent the message, assigned the task, or clicked Retry. It requires that the run recorded no provider turn or that its last provider turn is settled. System wakes, in-flight turns, and a Retry that this hook already requested do not continue automatically. - `heartbeat/recovery.ts`: call the hook after each reattachment claim. Label same-run retry reattachment as "Reattaching to the existing remote runner to resume this run", and add `trigger: "same_run_retry"` to the event payload. - `execution-blocker.ts`: a failed run whose saved work is verifiably recovered now offers Retry (`canRetry: true`) with "Saved work recovered. Retry or send a message to continue." An intentional Stop keeps "send a message" only. - `task-retry.ts`: optional `initiatedBy: "restart_recovery"` records the activity as actor `system`/`restart-recovery` with `onBehalfOfUserId`. - `doc/execution-semantics.md`: document the rule. ## Verification - New regressions in `server/src/services/workspace-recovery.test.ts` use the real recovery, Retry and dispatch services on embedded Postgres: - `continues a user turn once ... after $title and recovery saved the work` (3 cases: restart lease loss before the turn, same-run retry with the runner gone after a settled turn, same-run retry with the lease gone after a settled turn). Each asserts one queued successor bound to the Retry and the user's authority after recovery, idempotent hook calls, system activity attribution, and no second automatic attempt for the automatic Retry's own failure. - `does not continue automatically when $title, and offers a Retry that works on first use` (in-flight turn, system wake, unrelated error). Each asserts no successor, `canRetry: true` on the blocker and the interruption presentation, and one successor after one Retry click. - Red before the fix: all 6 tests fail (no successor, blocker `canRetry: false`). Green after the fix. - `npx vitest run src/services/workspace-recovery.test.ts src/services/task-retry.test.ts src/services/task-interruption-presentation.test.ts src/services/execution-blocker-read.test.ts src/services/heartbeat/recovery.test.ts src/services/explicit-native-continuation.test.ts src/services/quarantined-task-retry.test.ts src/__tests__/workspace-restore-repair-route.test.ts src/services/native-runtime/native-failed-workspace-recovery.test.ts`: 1098 passed. - Not verified on staging. After the next deploy, check a task interrupted by a restart: it should continue without a message, or show Retry. ## Risks - The automatic Retry uses the original user's authority. Admission rechecks that user's current permission, stop proof, saved-work recovery, approvals, pauses, budget and ownership. A refused request leaves the visible Retry. - A settled turn that ended without a result is continued with a fresh Retry turn from saved work. A turn whose outcome is unknown (in flight) is not. - The hook runs after the claim's execution returns. If the server stops between the failure and the request, the task shows Retry instead. - Not in scope: same-run disposition recovery still cannot start a new runner in the existing sandbox after the original remote runner exits. This change continues the task with one fresh Retry turn instead. If that Retry turn also ends without a result and loses its runner, the task shows Retry. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, used through Claude Code with tool use (shell, file edits, local test runs). ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Related: #19355 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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da34bcd48d |
fix(workspaces): resume archived imports from their saved upload (#19396)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Durable workspaces let a replacement web server restore saved task files. > - Legacy workspace imports keep a journal and an encrypted upload receipt across interruption. > - An archived Git import can rebuild a missing source from its saved task commit and edits. > - A fresh clone can also contain newer remote refs. Those refs change the archive manifest even when the task files are unchanged. > - This pull request recovers the exact authenticated upload for an interrupted archived Git import. > - The original journal, source binding, task binding, and execution checks still control publication. ## Linked Issues or Issue Description **What happened?** An archived Git workspace import stopped after its upload persisted. A retry rebuilt the source from the remote repository. New remote refs changed the archive manifest, so the original upload receipt rejected the retry with `remote_workspace_snapshot_operation_content_changed`. **Expected behavior** The retry must recover its original saved upload and complete the same import. It must keep the saved task commit, staged edits, unstaged edits, lifecycle state, and task binding. A changed source or task binding must still block publication. **Steps to reproduce** 1. Archive a Git task with staged and unstaged edits, save its restoration recipe, and remove its local repository. 2. Start the workspace import and lose the upload reply after object persistence, or interrupt its independent restore after the upload is acknowledged. 3. Advance the remote default branch and add an unrelated branch. 4. Retry the original import. Before this change, both interruption cases fail with the same content-change error. **Paperclip version or commit** Reproduced on master at `d8b0eae68772a3bd2bb4a8163b5ce95764b97cff`. **Deployment mode** Cloud workspace migration with external PostgreSQL and durable encrypted object storage. The regression tests use real disposable PostgreSQL, an HTTP Git remote, and encrypted filesystem-backed object storage. Related merged work: #18826 and #19138. No duplicate open fix was found. ## What Changed - Add scoped recovery of an acknowledged snapshot or a pending upload whose object persisted. Authenticate the archive before returning it. Recovery alone does not publish the snapshot. - Resume archived Git imports from those exact saved bytes. Keep the original operation and all publication checks. - Lock and recheck each saved nested source’s company, project, and repository identity in the final publication transaction. - Keep mutable local sources on the existing capture and content-comparison path. - Add regressions for both interruption points, unrelated remote changes, source revocation during recovery, and local edits after interruption. - Document the retry behavior. ## Verification - Before the repair: both new archived retry regressions fail with `remote_workspace_snapshot_operation_content_changed`; the mutable-source control passes. - After the repair: all 204 tests in the migration, snapshot storage, archive, and archive environment suites pass. The suites use real PostgreSQL and encrypted storage. - Server package typecheck and full repository typecheck pass on `bffebbab60edbdf50b42fc37a9e58beb01ceb94d`. - An added source-revocation test initially expected a later expiry error. The existing publication fingerprint rejected the change first. The test now requires that earlier `remote_workspace_migration_publication_changed` error and still checks that authority was not published. - The review finding was reproduced before the safety repair: changing a saved nested repository URL after upload still allowed publication. The new regression requires rejection, and unchanged approved nested sources still restore. - Full repository typecheck and build pass on the final head. The full local test command stopped at one Slack manager authorization fixture with `socket hang up`; the exact case then passed in isolation on the same head, and all three CI chat shards passed. The original local failure is retained. - The first CI server shard run had 4,724 passes and one runtime-process readiness failure in an unchanged fixture. The exact fixture passed in isolation. One unchanged rerun of that shard passed. The first failure remains recorded in the workflow history. - The earlier candidate’s full local test run was stopped after the confirmed review finding; that interrupted run is not reported as a pass. - All CI gates, including `ci / verify` and `ci / e2e`, pass on `bffebbab60edbdf50b42fc37a9e58beb01ceb94d`. Greptile is 5/5 on that head, with no remaining findings or unresolved review threads. ## Risks Recovery applies to archived Git sources, whose saved recipe and lifecycle checks still run before publication. A source change during recovery must keep the snapshot unpublished. Missing or corrupt saved objects still fail authentication or retain the existing import obligation. Mutable local sources still reject changed contents. This change adds no database migration and changes no saved archive format. ## Model Used OpenAI GPT-6 in Codex, with code editing, tool use, and test execution. The exact runtime model identifier and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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5c185db77c |
fix(tree-control): resume work a subtree pause interrupted (#19394)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work
> - Task tree control lets the board pause a task tree and then resume
it.
> - A pause stops the runs that are active in the tree. The release must
then continue the work that was pending.
> - A child task whose run was active at pause time did not start again
after release. The child became blocked and asked for a user message.
> - A pause is an operator hold, not a failure. It must not strand work,
and it must not require reconciliation for a run that never started.
> - This pull request re-dispatches interrupted work one time on
release, and it settles a legacy Stop that never entered the adapter.
> - The benefit is that pause and resume keep a task tree moving without
manual recovery, and real safety gates stay in force.
## Linked Issues or Issue Description
**What happened?**
A parent task delegated two children. One child's run was active (in
host workspace preparation, before the adapter started) when the board
paused the parent's tree. The pause cancelled that run. After the board
released the hold, no new run started for that child. The child became
`blocked` with the execution blocker cause
`legacy_execution_requires_reconciliation`. Later the next action became
"Send a message to continue." A sibling child that had no active run at
pause time resumed normally.
**Expected behavior**
A run that a subtree pause cancels is an operator hold. On release, the
pending work starts again one time, automatically. It does not go
through execution reconciliation when the run never entered its adapter.
It does not wait for a user message.
**Steps to reproduce**
1. Create a parent task and a child task that is assigned to an agent.
2. Wake the child. While its run is in host preparation (or queued),
call `POST /api/issues/:parentId/tree-holds` with `{ "mode": "pause" }`.
3. Call `POST /api/issues/:parentId/tree-holds/:holdId/release` without
`wakeAgents`.
4. Before this change, no new run starts, and `getExecutionBlocker`
reports `legacy_execution_requires_reconciliation` for the child.
**Root cause**
- (a) The pause records each interrupted run in the hold member snapshot
(`activeRunId`). Nothing used that record on release.
- (b) Release woke tasks only when `metadata.wakeAgents === true`.
Without it, release relied on stranded-issue recovery. That recovery
stands down when the latest run was cancelled by an operator
(`isOperatorCancelledRun`). So the interrupted child had no owner.
- (c) The pause Stop of a legacy run in preparation is written directly
as `cancelled`. Legacy terminalization classifies a cancelled run with
no bootstrap evidence as an unknown outcome. It records
`legacy_execution_requires_reconciliation`, although the gated dispatch
never entered the adapter.
- Native runs: the verified native Stop does not create the
reconciliation hold, but gap (b) applies to native runs too. The release
change is runtime-independent.
## What Changed
- `issueTreeControlService.findOwedPauseResume` decides if a task is
owed one resume. The task's latest run must be an operator Stop that a
pause hold member snapshot names, recorded while that hold was active.
The task must still be executable by the same agent, and no pause may
still cover it. The obligation belongs to the run, so overlapping pauses
keep it until the last covering release.
- New `services/issue-tree-resume.ts` re-dispatches owed work with wake
reason `issue_tree_resumed` (`holdId` and `interruptedRunId` in the
context). A compare-and-set claim (`treeHoldResume`) on the interrupted
run makes the resume happen at most once. A failed wake returns the
claim.
- Pause release and `mode: "resume"` call it for every member of the
released hold, also without `wakeAgents`. When `wakeAgents` is true, the
existing loop wakes every executable member.
- A task that still has an execution blocker is not replayed. The
release writes `issue.tree_resume_wake_skipped`, the blocker stays
visible, and the obligation stays unclaimed.
- `releaseHold` updates only an `active` hold. A repeated release gets
`409`.
- `settleCancelledLegacyPreparation`: when the executor that owned a
cancelled legacy run proves that dispatch never entered the adapter, it
records bootstrap evidence and resolves that run's
`legacy-execution:<runId>` hold as `false_positive`. It also corrects an
automatic no-replay disposition and restores a `blocked` status only
when that disposition made the change. Then it re-dispatches owed work,
for a release that happened while the Stop was unwinding. It requires a
requested Stop with no existing recovery receipt, and no process,
session, native finalization, unreleased lease, or execution-start
event.
- `settleUnrecoverableExecutions` waits while a legacy executor still
holds its controller lease, and records a `legacyCancellationBlock`
receipt when it blocks a task for a cancelled legacy run.
- Docs: `doc/execution-semantics.md` and `doc/composer-stop.md` describe
the resume rule.
## Verification
- New regression
`server/src/__tests__/issue-tree-pause-resume-run.test.ts` uses embedded
Postgres, the real heartbeat, and the real tree-control routes:
- A run paused during preparation: nothing runs during the hold, there
is no blocker, and release creates exactly one `issue_tree_resumed` run
that succeeds. A second release returns `409` and creates no run.
- Release before the stopped preparation finishes unwinding (with the
periodic disposition run in between): exactly one resumed run after the
executor settles.
- An automatic no-replay disposition that ran first: the blocker clears,
the status returns to `in_progress`, and release resumes once.
- Overlapping child and parent pauses: no resume while the parent pause
remains, then exactly one resume after it is released.
- A queued run cancelled by the pause: release creates exactly one
resumed run.
- A task reassigned to a user during the hold: no resume.
- A mid-turn legacy Stop with unknown outcome: no replay, the
reconciliation blocker remains, and `issue.tree_resume_wake_skipped` is
logged.
- Red before each fix: the first 4 cases failed on master; the 3 review
cases failed on the first PR commit. All 7 pass now.
- Also passed locally: `issue-tree-control-routes`,
`issue-tree-control-service`, `heartbeat-workspace-busy`,
`heartbeat-undispatched-execution-wait`, `execution-control-work`,
`legacy-workspace-restore-recovery`, `legacy-continuation-authority`,
`task-retry`, `legacy-execution-recovery`, `agent-conversations`,
`heartbeat-retry-scheduling`, `satisfied-connection-intents`.
- Not verified here: a live staging pause/resume. Re-check on staging
after deploy.
## Risks
- Behavior change: release now starts the work that the pause
interrupted, also without `wakeAgents`. Before, that work stayed idle.
Other idle tasks still wake only with `wakeAgents`.
- The settlement trusts the executor's adapter-entry flag. The flag is
set only inside the atomic dispatch gate, which refuses a cancelled run.
The settlement also requires no process, session, lease, or execution
event.
- A native run whose Stop has not finalized at release time is not a
target. Stranded recovery and explicit wake still apply.
## Model Used
- Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, used through Claude
Code with tool use (shell, file edit, test execution).
## Checklist
- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge
🤖 Generated with [Claude Code](https://claude.com/claude-code)
---------
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
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958f9aa9f3 |
feat(issues): limit agent-created task trees to parent and child (#19312)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Agents split work into tasks. A task can have a parent task. > - Today agents can nest tasks to any depth: parent, child, grandchild, and deeper. > - Deep agent-made trees are hard to follow, and an agent that works on a child task makes grandchildren by default. > - This pull request limits agent-created trees to two levels: a top-level task and its children. > - A request for a grandchild does not fail. The server puts the new task beside the requester and tells the agent. > - Board users keep full control. They can still nest to any depth. Existing deep trees stay valid. > - The pull request also records which task created each new task, so the audit trail stays complete when the parent changes. ## Linked Issues or Issue Description No public issue exists. This is the feature description. Related: #16853 (budgets that include descendant work) also reasons about task trees; this change does not alter its traversal. **Subsystem affected** Issues (tasks): create, child create and move in the issue service and routes. Agent tools, chat suggestions and creation provenance use these paths. **Problem or motivation** Agents create subtasks as deep as they want. An agent that runs on a child task gets that child as the default parent, so its follow-ups become grandchildren. The trees become deep and hard to read. The parent link is also the only record of which task created a follow-up, so that record is lost when the parent changes. **Proposed solution** Limit agent-created trees to a parent and its children. When an agent asks for a grandchild, put the new task under the requester's parent and return `parentAdjusted`. Do not reject the request. Keep board users unrestricted. Record the originating task in a new server-set `origin_issue_id` column. Keep `origin_run_id` as the originating run. **Alternatives considered** Reject grandchild requests with an error. We did not do this, because agents then fail mid-task. Add a database constraint. We did not do this, because existing deep trees must stay valid and nesting can return later. ## What Changed - Add `MAX_AGENT_TASK_HIERARCHY_DEPTH` (2) and the `IssueParentAdjustment` type in `packages/shared`. - Add `resolveNewTaskParent` and `planIssueParentChange` in `server/src/services/issues.ts`. `create`, `createChild` and `update` use the agent limit by default (`parentDepthPolicy: "flatten"`). - The issue create, `/children` and PATCH routes pass `allow_nested` for board users. For agents, the routes check authorization against the parent that the server actually writes. - The requester keeps its behavior when the server moves a task beside it: `blockParentUntilDone` blocks the requester, and the new task inherits the requester's workspace and privacy. - The server never moves a task above a low-trust boundary root that contains the requester. - These subsystems keep any depth, because they find their work by parent: watchdog reviews, monitor recovery, email-channel placement, and routines that a person configured. - An agent move of a task that has children skips only the parent change and returns `reason: "has_children"`. - Add `issues.origin_issue_id` (nullable, `on delete set null`, indexed) in migration `0434`. Only the server sets it. The `createdFrom` detail field, the `createdFromIssueId` filter and task-creation provenance read it first. - Chat prompts now let a chat agent create one task, a task with children, or separate tasks. The conversation is never a parent. - The runner `create_task` tool accepts an optional `parentTaskId`. A chat agent can create a top-level task and then put subtasks under it. The run must be able to read and change the parent. A conversation is never a parent. The depth limit still applies. Project tools map the field to `parentId` through the issue route. The protocol manifest, semantic contracts and eval fixture are regenerated. - Watchdog runs that have an active watchdog keep their requested parent on all create paths, because their access is limited to the watched subtree. - Fix a bug that the test drive found: the chat (MCP) `create_task` ignored the requested `status`, so a `backlog` task became `todo` and started to run. It now uses the same rule as the native tool. - Update `skills/paperclip`, `doc/SPEC-implementation.md`, and add the plan `doc/plans/2026-11-05-two-level-task-hierarchy.md`. ## Verification - `cd server && npx vitest run src/__tests__/agent-task-hierarchy-depth.test.ts src/__tests__/agent-task-hierarchy-depth-routes.test.ts`: 19 new tests for service and route behavior, all pass. - Related suites (64 files: issues service, thread interactions, privacy, watchdogs, provenance, runner tool authority, decisions, routines, project tools): 1208 tests pass. Two tests changed because of the intended behavior and pass now. Two `email-channels.integration` tests fail locally because the test cannot find a bundled skill file from this worktree path. This change does not touch that code. - `packages/db`: migration safety, snapshot drift and journal tests pass. - Typecheck passes for `server`, `packages/shared`, `packages/db`, `cli` and `ui` (local `ui` errors come only from generated Storybook catalog files that are absent). - Local test drive on an isolated instance with real Claude agents: 29 of 29 use cases pass, including an agent on a child task (follow-ups placed beside it, with the notice) and a chat that creates a top-level task with three subtasks. - I did not run the full `pnpm test:run` or `pnpm build` locally. CI runs them. ## Risks - Behavior change for agents: some follow-ups that were grandchildren are now siblings. The parent of the requester is woken when all its children finish, which now includes these tasks. - The runner `create_task` input contract adds one optional field, so the protocol manifest and the pack contract change. The tool output does not change: it shows the actual `parentId`, and the activity log records `parentAdjusted`. - Migration `0434` adds a nullable column, a foreign key and an index. It does not backfill rows. - `IssueCreationSource.run` is now nullable. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`) in Claude Code, with tool use (shell, file edits, local test runs). ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [ ] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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f8cb4957dc |
fix(ui): default Tasks to All tasks with a neutral sort header (#19393)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The Tasks page helps people inspect work across their company. > - A new viewer currently starts in Mine and can miss other company tasks. > - The task table also shows an active sort header before the viewer selects a sort. > - This pull request starts new viewers in All tasks and keeps the default sort header neutral. > - People see company work in newest-update order and keep their saved view choices. ## Linked Issues or Issue Description **What existing behavior does this improve?** The initial task view and the task table's default sort state. **Subsystem affected** ui/ — React board UI. **Current behavior** Tasks opens Mine when the viewer has no saved view. The table highlights Last updated even when the viewer has not selected a column sort. **Proposed behavior** Tasks opens All tasks when no saved view exists. The table keeps newest-updated tasks first without an active header or arrow. A column selection or an explicit sort URL activates the selected header. **Reason and benefit** New viewers can inspect company work immediately. The header distinguishes default ordering from an explicit sort choice. **Breaking changes** The first-visit view changes from Mine to All tasks. Saved views and explicit view URLs keep priority. Existing Inbox and Needs attention preferences retain their meaning. The change does not alter task access or database contracts. **Additional context** Refs #19363. This change builds on the grouped task menu from that merged pull request. It uses the existing menu and design tokens. ## What Changed - Default the Coordinator and combined task surfaces to All tasks. - Preserve saved personal views and migrate previous picker choices. - Keep implicit Last updated descending order separate from active header state. - Test default ordering, explicit sorting, reset behavior, view selection, and preference migration. - Update the product and implementation docs. ## Verification - Passed 118 focused tests across task routing, table sorting, views, and collection preferences. - Passed `pnpm check:token-gates`, `pnpm -r typecheck`, and `pnpm build`. - Full `pnpm test:run` is running. Its result will be updated here. - Greptile passed the current head with 5/5 and no findings or open review threads. - Browser check: All tasks uses the grouped My work and Organization menu. Last updated has no active highlight by default. Selecting the header adds the sort URL and active direction. Removing the explicit sort restores the neutral header. - Manual check: Open Tasks with no saved task view. Confirm All tasks opens. Select Mine, leave Tasks, and return. Confirm Mine remains selected. ## Risks - The new default shows more accessible company tasks on the first visit. Saved view choices remain intact. - Task tables share the sort-state change. Explicit sort links and column clicks retain active styling. Default row order stays newest-updated first. - No schema, API, permission, or execution changes. ## Model Used OpenAI Codex, GPT-6 family. This session does not expose the exact model ID or context-window size. Used reasoning, code editing, terminal commands, and browser verification. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Scott Tong <scott@scottsmbpm5max.lan> Co-authored-by: Paperclip <noreply@paperclip.ing> |
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8f79a32898 |
fix(connections): keep agent access consistent through setup and permission changes (#19352)
Task-hosted tool setup kept requester-only defaults, and audience edits could leave runtime installations restricted after permission bindings were widened. Large provider catalogs could also fail before creating an access card. Use the normal agent audience defaults for new tool setup, preserve explicit selections through verified OAuth and draft resumption, and synchronize permission bindings and runtime installations atomically. Enforce agent-edit authority and preserve existing access during additive account reuse. Validation: 915 focused regression tests, typechecks, and builds passed. All 54 CI checks passed and Greptile Apex scored the reviewed head 5/5 with no unresolved threads. Broad local test failures, recoveries, and incomplete heartbeat coverage are documented in the PR. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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4550253dc9 |
feat(ui): rename Needs you to Inbox and move Mine into Tasks (#19363)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Coordinator gives people navigation for conversations, tasks, and decisions. > - The decision entry is called Needs you, while a separate Inbox remains under More. > - Coordinator's personal task filter does not retain the full behavior of the original Mine view. > - This pull request names the decision entry Inbox and hosts the original personal work views inside Tasks. > - People keep their triage tools and saved choices without moving between two task destinations. ## Linked Issues or Issue Description **What existing behavior does this improve?** Coordinator navigation and the personal Mine view in Tasks. **Subsystem affected** UI navigation, task view routing, task collection preferences, and browser coverage. **Current behavior** Needs you opens the decision feed. More contains another Inbox destination. The default Coordinator task filter matches task creators and assignees. It does not use the full personal participation rules, archive behavior, shortcuts, grouping, or saved columns of the original Mine view. The organization task table also resets its column choices on reload. **Proposed behavior** Inbox opens the same decision feed with the inbox icon. Tasks defaults to Mine and remembers a person's selected view per company. Mine uses the existing personal Inbox implementation and preferences. It retains read/unread title weights, keyboard navigation, read/unread shortcuts, archive and undo, mobile swipe-to-archive, grouping, and saved columns. Old Inbox links open the matching task view. The organization task table saves its columns and order per person and company. **Reason and benefit** People get Chat, Tasks, and Inbox as distinct navigation entries. Personal work remains a view within Tasks without losing the existing triage behavior. **Breaking changes** Coordinator no longer offers the previous Inbox destination under More. Old Inbox URLs redirect into Tasks and retain query parameters and fragments. The Needs you label becomes Inbox; its decision feed, count, history, and resolution paths stay in place. Classic retains its separate optional combined-list setting. **Additional context** Refs: #19360, the workspace-defaults PR now integrated from master. Refs: #10620, related Inbox attention ordering. Duplicate searches found no open PR for this navigation and Mine integration. Roadmap review found no separate new execution feature in this scope. ## What Changed - Rename Coordinator's desktop and mobile decision entry and page to Inbox. Use the inbox icon. Remove the old Inbox item under More. Clarify that the combined-list experiment applies only to Classic. - Add one Coordinator task-view router. Host Mine, Unread, Recent, Blocked, and Everything through the existing Inbox owner. Keep organization views in the task table and board. Normalize legacy filtered URLs before mounting a collection so clearing the last filter preserves the current layout and local filters. - Reuse the existing Mine API, participation, read state, archive cache, undo, keyboard, mobile gesture, grouping, and preference paths. Existing personal column choices carry over. - Save organization task-table columns and order per person and company. Keep controls usable if browser storage fails. - Update navigation tests, routing and persistence regressions, exact-run retry browser coverage for each workspace variant, product documentation, and the affected Storybook notes. Keep existing story IDs. ## Verification - Preference, routing, navigation, task table, and inherited Inbox regression tests pass in focused runs. After integrating master and addressing the review finding, all 187 focused tests, UI typecheck, and token gates pass. - Full build and repository typecheck pass after integrating master. The full UI suite previously passed: 894 files, 11,169 tests passed, and one skipped. All 14 desktop/mobile triage and exact-run retry browser cases, including a fresh production UI build, pass after integrating master. - The full repository test suite was not run locally for this UI-only change; full PR CI is running. - Browser checks use a fresh isolated local instance and a deterministic process agent for real run-attributed unread activity. They exercise legacy URLs, title weights, saved grouping and columns, read/unread shortcuts, archive/undo, and a real mobile touch gesture. - Earlier browser fixtures were corrected: own activity is read, agent comments need valid run attribution, and undo uses `u` after the archive refresh completes. The Inbox content heading is scoped separately from the layout heading. - The final settings wording correction passes all 63 settings tests. - The [next CI browser run](https://github.com/paperclipai/paperclip/actions/runs/42137377960/job/127629100535) caught an old URL assertion for denied run retries. The test now pins each workspace variant and covers Coordinator Tasks explicitly. The old expectation fails deterministically for Coordinator; all 12 retry cases pass with the corrected destination, preserving exact run identity and truthful queued, deferred, and denied feedback. - Token gates, map checks, and Storybook catalog checks pass. All 30 map/catalog script tests pass. Storybook play tests were not run. - Greptile reviewed [the final commit](https://github.com/paperclipai/paperclip/commit/5f2f3789b83af259f694f379afb769465688fb72) at **5/5** with no new actionable findings. Its sort-only link finding is fixed and resolved: three cases fail before the fix and pass after it. `sortField` and `sortDir` keep organization links on the organization table. [Current-head CI](https://github.com/paperclipai/paperclip/actions/runs/42139668774) is running. - [CI exposed a routing race](https://github.com/paperclipai/paperclip/actions/runs/42135293421/job/127621981587) when removing the last label from a legacy Everything link. Four deterministic regressions failed before the fix and now pass: collections only mount after URL normalization. The existing end-to-end component cases confirm local filters, board layout, fragments, and history survive the change. - The [initial server shard 4 run](https://github.com/paperclipai/paperclip/actions/runs/42131163087/job/127608751620) failed an unchanged monitor-drain idleness assertion: two active operations remained instead of zero. The complete scheduling suite passes locally (54 tests). One isolated CI retry passed, including its dependent verification gate. The original timing failure's root cause is not established. ## Risks - Mine includes the existing tasks, approvals, failed runs, and join requests, preserving the original personal participation and attention rules. - Shared URLs with organization filters or table sort parameters still open the organization task collection. Task back-links retain their original fragments. - Saved preferences are browser-local. Mine keeps its existing storage keys; the organization table and selected Coordinator view use person/company scopes. - No database or server API contract changes are included. Existing company access, personal participation, and decision permissions retain their owners. ## Model Used OpenAI Codex, based on GPT-6, with reasoning, repository tools, code execution, and browser automation. The exact serving revision and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Scott Tong <scott@scottsmbpm5max.lan> Co-authored-by: Paperclip <noreply@paperclip.ing> |
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33269e1fec |
fix(observability): report directory-merge lock holder diagnostics (#17755)
A directory-merge lock timeout (ERR_WORKSPACE_RESTORE_LOCK_TIMEOUT) already carries allowlisted holder evidence, but server Sentry capture dropped it. - Add directoryMergeLockTimeoutDiagnosticsFor in adapter-utils: closed labels, booleans and bounded durations; no owner PID or paths. - server captureException: lock timeouts get an event-local directory_merge_lock context and error_code=workspace_restore_lock_timeout tag; default grouping and message unchanged. - run-failure-diagnostics restoreLock* fields use the shared reader (same allowlist and order). - Document the record in doc/workspace-restore-locks.md. Diagnostics only; does not change lock acquisition, timeouts or retries. Refs PAPERCLIP-BACKEND-4Q Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> |
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3a8f95d928 |
fix(ci): let verified Dependabot lockfiles merge through the reporting-lock gate (#19356)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Only trusted environments may change `pnpm-lock.yaml`: the lockfile refresh workflow and Dependabot. Contributors never commit it. > - Paid evaluation jobs also install a lock only when the reporting-lock proof (`tests/runner-e2e/report-lock.json` and `.patch`) admits it. > - #19283 added a CI test that checks the committed lock against that proof. Only the refresh workflow writes the proof, so every Dependabot lockfile pull request now fails CI. Examples are #17364, #17172, and #17911. > - A merged Dependabot lockfile also breaks the refresh workflow. `prepare-report-lock.mjs --refresh` refuses to renew the proof for a lock that the proof does not already admit. > - This pull request lets a verified Dependabot lockfile pass, and it keeps both lockfile rules strict. It also closes a gap in the contributor rule. > - The benefit is that Dependabot security updates can merge again, and only trusted environments write lock content. ## Linked Issues or Issue Description Refs #19283, #17364, #17172, #17911, #19303. **What happened?** `server/scripts/reporting-lock-policy.test.mjs` fails on each Dependabot pull request that changes `pnpm-lock.yaml`. The error is "Reporting lock changed; review the dependency correction before install". A Dependabot pull request cannot change the proof files, so it can never pass. After a merge, the lockfile refresh also stops at "Committed report lock is not reviewed; refusing to refresh its proof". **Expected behavior** - Contributors cannot change `pnpm-lock.yaml` or the reporting-lock proof. - Dependabot can change `pnpm-lock.yaml`. - The lockfile refresh workflow can change `pnpm-lock.yaml` and the proof. - After a Dependabot lockfile merges, the refresh workflow admits it and renews the proof. **Steps to reproduce** 1. Open a Dependabot pull request that changes `pnpm-lock.yaml`, such as #17364. 2. Let CI run. The `server (9/12)` shard fails on the reporting-lock policy test. **Security gap found during this work** The old rule skipped the lockfile check when `github.head_ref` was `chore/refresh-lockfile`. A contributor could open a pull request from a fork branch with that name and commit a lockfile change. The old rule also exempted any pull request that Dependabot opened, including commits that other people pushed to its branch. ## What Changed - Add `.github/scripts/lockfile-trust.mjs`. It decides which writers may change lock content: - The refresh workflow: the head is `chore/refresh-lockfile` in this repository, and `github-actions[bot]` opened the pull request. - Dependabot: Dependabot opened the pull request from this repository, and the head `pnpm-lock.yaml` matches a Dependabot commit. That commit must have `dependabot[bot]` as its author, GitHub (`web-flow`) as its committer, and a verified signature. The script reads these fields from the GitHub API. - The reporting-lock proof files count as lock content. Only the refresh workflow may change them. - `pr-trusted.yml` policy job: replace the inline `head_ref` and author exemption with `lockfile-trust.mjs pr`. The job runs the script copy from the base commit, so a pull request cannot change the check that judges it. If the base predates the script, the job uses the earlier rule. - `refresh-lockfile.yml`: add `lockfile-trust.mjs merged`. It checks that the last lockfile change on `master` is a GitHub-signed merge of a Dependabot pull request, and that the lockfile at the pull request head matches a verified Dependabot commit. If both checks pass, it gives the lockfile SHA-256 to `prepare-report-lock.mjs --refresh --trusted-lock-sha256`. - `refresh-lockfile.yml` PR step: check `pnpm-lock.yaml` and both proof files before it exits as unchanged. A refresh that renews only the proof now opens a pull request. - `prepare-report-lock.mjs` and its `.d.mts` declaration: `refreshReportLock` accepts a trusted lock hash. If the trusted lock already resolves, the proof admits it exactly with an empty patch. If not, the proof records the resolution as the reviewed correction, as before. - `reporting-lock-policy.test.mjs`: skip on Dependabot pull requests. The policy job verifies those lockfiles. The general test job gets `PAPERCLIP_CI_PR_AUTHOR` for this purpose. This keeps the test, so it still merges cleanly with #19303. - `check-pr-lockfile.mjs` (advisory gate): allow Dependabot lockfile changes, and flag changes to the proof files. - `CODEOWNERS`: add the two proof files. - `doc/RELEASE-AUTOMATION-SETUP.md`: describe the writers, the `@dependabot recreate` path, and the proof renewal after merge. ## Verification - `node --test '.github/scripts/tests/*.test.mjs'`: 707 passed. This includes 17 new tests in `lockfile-trust.test.mjs` and 3 new tests in `check-pr-lockfile.test.mjs`. The new tests run the `pr` command against real git histories with a stub `gh`. - `tests/runner-e2e/prepare-report-lock.test.ts`: 10 passed, including 3 new trusted-lock refresh tests. I ran it with a minimal Vitest config, because the runner-e2e config builds a provider bundle first. - `server/scripts/reporting-lock-policy.test.mjs`: passes normally, and skips with `PAPERCLIP_CI_PR_AUTHOR=dependabot[bot]`. - Live check of the `pr` mode against #17364 with the real GitHub API: - With the real author, it reports "pnpm-lock.yaml matches verified Dependabot commit 83c328c15c…" and `writer=dependabot`. - With a contributor as the author and `chore/refresh-lockfile` as the head ref, it fails. - Live check of the `merged` mode at the real merge commits of #16018, #16020, and #15361. All three report a trusted lock hash. For #16018 and #15361, `master` changed after Dependabot's commit, so GitHub's merge produced different lockfile bytes. An exact-bytes rule would refuse them. That is why the rule trusts GitHub-signed merges of a verified Dependabot head. - Greptile reviewed `513ca2def8` at 4/5 with one P1: a proof-only refresh was never committed, because the PR step checked only `pnpm-lock.yaml`. `edbeb1ea0d` fixes it. A new test in `lockfile-refresh-merge.test.mjs` runs the step's change check on a proof-only change. The test fails without the fix. - CI `Typecheck + Release Registry` failed at `edbeb1ea0d`: `prepare-report-lock.d.mts` did not declare the new options argument (TS2554 twice in `prepare-report-lock.test.ts`). `9139aaad85` updates the declaration. A local `tsc -p tests/runner-e2e/tsconfig.json` shows the 2 errors with the old declaration and none with the new one. - CI at `9139aaad85` failed in six general test shards. None of them run code that this pull request changes, and PR CI loads `pr-trusted.yml` from `master`. The failures: - `heartbeat-plugin-environment.test.ts`: "expected 'running' to be 'succeeded'" - `status-card-evaluation-work.test.ts`: a deadline comparison - `isolated-repository-rehome.test.ts`: timed out after 15 seconds - `chat-channels.integration.test.ts`: GitHub webhook recovery scheduling - `company-import-export-e2e.test.ts`: child server start timeout, which also fails on unrelated branches - `workspaces-b`: every test passed, but an `EPIPE` error came after `acpx-engine/execute.test.ts` I started a rerun of the failed jobs. - Superagent found a P1 at `9139aaad85`: a verified signature proves who committed, not who authored. A collaborator could sign a commit with their own key and set Dependabot as the author. `4fe180d6c1` also requires GitHub (`web-flow`) as the committer. New tests cover the spoofed-author case. #17364, #16018, #16020 and #15361 still verify against the GitHub API. - `git merge-file` merges this test change with #19303 without conflicts. - Not run: the full repository test suite and typecheck. These changes touch only CI scripts, workflows, one helper, and tests. GitHub CI covers full regression. ## Risks - `pr-trusted.yml` loads from `master`, so the new policy takes effect only after merge. This pull request's own CI uses the earlier rule. - A Dependabot pull request that is behind `master` now fails if someone merges `master` into it and the lockfile changes. Use `@dependabot recreate`. The policy job error says this. - Paid evaluation jobs refuse a merged Dependabot lockfile until the refresh pull request merges. The refresh merges without review when it adds no new package versions. If the release-age gate holds it, the wait lasts until a maintainer merges it or the daily refresh runs. During that time, the reporting-lock policy test also fails on other pull requests, which is the current behavior for any unrenewed lock. - The rule trusts GitHub as the signer of Dependabot commits and of merge commits (`web-flow`). Superagent uses the same trust root. - People with write access can still push to `chore/refresh-lockfile`. This was already true. The bot merges only its own head commit (`--match-head-commit`), and code-owner review covers anything else. - A future manual proof renewal, such as #19283, now needs the refresh workflow or an admin merge. A contributor pull request that changes the proof files fails. ## Model Used - Anthropic Claude Opus 5.5 (`claude-opus-5-5`), with tool use and code execution, in Claude Code. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass (focused tests; see Verification) - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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e6c74982fe |
fix(workspaces): report why a workspace provider operation failed (#19362)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work
> - A project can store its task workspaces with a workspace storage
provider plugin. Core calls the plugin's `workspaceOperation` method to
prepare, inspect, finalize and remove a workspace.
> - `callWorkspaceProvider` catches every rejection of that call and
throws the same conflict: "Workspace storage operation is incomplete;
retry the same workspace".
> - A provider error, an RPC timeout, a crashed worker and a worker that
never got the call all look the same in the run, the log and the API.
The message tells the user to retry, also when the failure is a fixed
configuration problem that a retry cannot fix.
> - In one diagnosis, three different configuration failures in a row
showed this same message. Finding each cause took trace span counts and
database reads.
> - This pull request lets a provider send a reason from a closed set,
and makes Core tell transport failures apart from provider failures.
> - The benefit is that a failed run says what failed and whether a
retry can help. Provider text and values still never cross into Core.
## Linked Issues or Issue Description
**What happened?**
A workspace provider's `workspaceOperation` failed. The run failed with
"Workspace storage operation is incomplete; retry the same workspace",
`errorCode: setup_failed`, and no reason in the run record or the
`heartbeat execution setup failed` log. Retrying did not help, because
the cause was a provider configuration problem.
**Expected behavior**
Core tells these cases apart: the worker did not receive the call, the
call timed out, the worker stopped during the call, or the provider
reported a failure. For a provider failure, Core shows a bounded reason.
Core tells the user to retry only when a retry can help.
**Steps to reproduce**
1. Install a workspace storage provider plugin whose
`onWorkspaceOperation` throws during `prepare` (for example, because of
missing provider settings).
2. Run an agent task in a project that uses that provider.
3. See the failed run: the error is the generic retry message, and the
run record and logs do not show the cause.
**Paperclip version / commit**
`master` at
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f2593b7905 |
feat: make Coordinator and Agent Chat standard and speed up navigation (#19360)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - People enter that work through the workspace, agent conversations, and tasks. > - Coordinator and Agent Chat still require experimental enrollment. > - Task link prefetches do not warm the compact queries used by the default task view. Chat also waits for a request when its navigation list already holds the conversation. > - This pull request makes Coordinator and Agent Chat standard and reuses the reads needed for navigation. > - People can choose Classic workspace in Experimental settings. Cached work can appear while fresh data loads. ## Linked Issues or Issue Description **What existing behavior does this improve?** Workspace selection, Agent Chat availability, and navigation between Chat, Tasks, and task details. **Subsystem affected** Cross-cutting: UI, workspace preferences, instance settings, and the database migration. **Current behavior** People must enable Coordinator and Agent Chat in Experimental settings. Opening a task can repeat requests because prefetch warms the full detail and comment queries, while the default view reads compact task data and a recent comment window. Opening Chat waits for a detail request even when the current person's conversation list contains it. **Proposed behavior** Coordinator is the standard workspace for everyone. Experimental settings offer Classic workspace, off by default. Old Coordinator experiment values do not select Classic. Agent Chat is available to everyone, including instances with an old saved or managed off value. Task link intent warms the queries used by the mounted view. Chat can use the current person's company-scoped conversation list during refresh. **Reason and benefit** People can use the standard workspace without setup. Repeat navigation can show cached content while the server refreshes it. **Breaking changes** Existing Coordinator experiment and Agent Chat off values no longer disable these surfaces. Classic requires an explicit new opt-in. The workspace API keeps its existing response shape and audit checks. The migration retains legacy values and adds a separate Classic preference. Execution permissions, company access, and chat privacy checks still apply. **Additional context** Roadmap check: this graduates existing surfaces and improves their navigation. It does not add a new agent execution capability. Duplicate searches found no open Coordinator workspace PR. Related server cache work, Refs: #17828, addresses compact issue-list invalidation; this PR addresses client navigation queries. ## What Changed - Add a default-off Classic workspace preference. Derive the existing workspace API response from that choice. Keep personal persistence, account isolation, and audited writes in the workspace preference service. - Replace the Coordinator experiment control with Classic workspace. Use Coordinator while preferences load. Update the existing settings examples and navigation recipe. - Retire the Agent Chat experiment control. Ignore old stored and managed off values. Retain the compatibility key and the existing execution and access checks. - Reuse account- and company-scoped chat list data with its original freshness timestamp. - Share compact task and recent-comment query options between prefetch and the task view. Keep full-history prefetch for Classic tasks and expanded history. - Add upgrade, replay, cache, account isolation, and browser switching regressions. Update product, database, development, and roadmap documentation. ## Verification - Targeted preference, settings, migration, cache, and UI regression tests passed during implementation. The cache tests hold refresh requests pending and check that content still renders. They also check account isolation and stale refresh behavior. - A real browser test verified fresh Coordinator defaults, Classic opt-in persistence, and return to Coordinator. It used an isolated source checkout with fresh data on macOS. - Token, migration numbering and safety, map, and Storybook catalog checks pass after the rebase. - Repository typecheck and build pass. Typecheck and token gates also pass after review repairs. The broad local run passed all six chat integration shards (1,931 tests). It then found the host-CLI-dependent recovery fixture described below. Its remaining duplicate work was stopped after the full current-head CI matrix passed; this is not a claim that the broad local command completed green. - Review repairs passed 419 UI/migration fixture tests, 19 Coordinator navigation tests, and all 214 tests in the five affected server suites. The 24 Chat/workspace browser tests pass, including standard Coordinator switching and explicit Classic persistence. - The broader browser repair run passed 85 tests. It retained two failed assertions and skipped five later serial cases. The affected files then passed all 11 tests after the fixes: reopen the desktop panel after reload and open More for Audit and Connectors. This includes the five serial cases that had not run. - The broad local suite exposed a recovery fixture that executed the host Codex CLI during a simulated remote probe. On a host with Codex 0.154.0, model fallback broke its fixed-model assertion. The fake sandbox now reports Codex 0.160.0. All 20 selected recovery/provider compatibility cases pass after the repair. - A CLI company import/export suite timed out during server startup in the second CI run. The port fallback is intentional in that fixture. No root cause was established. That suite passes on the final commit in CI. This records recovery, not a claimed product fix for the earlier timeout. - The first CI run exposed remaining assumptions about the retired flags and Classic UI. The repair commit updates those fixtures and navigation steps. It also restores the missing enabled Cases destination in Coordinator. Earlier local recovery attempts used the wrong fixture notification and advanced fake time during live execution; the corrected tests use the subscribed recovery queue and wall time during execution. - Greptile reviewed commit `98972b030d4505d838427a2fca6b196b8cad6d47` at **5/5** with no new comments. The original finding is resolved. - Current-head CI is green: **56 successful checks**, with three checks skipped by workflow filters. This includes typecheck, build, the complete Vitest matrix, all eight browser shards, Runner verification, release checks, and security checks. [Final CI run](https://github.com/paperclipai/paperclip/actions/runs/42132651414). - Typecheck caught missing `pid` and `startedAt` fields in the simulated command result. The fixture now returns the complete process contract, and the server test-layer typecheck passes. - Storybook catalog alignment was checked. Storybook play tests were not run. Hosted latency and cold bundle loading were not measured. ## Risks - The new default changes the workspace for people who previously left the Coordinator experiment off. They can opt into Classic in Experimental settings. - The additive migration must run before the new server code. It is safe to replay and preserves explicit Classic choices. - Cached content can be stale during background refresh. Existing query invalidation and source timestamps still control freshness. - These changes reduce avoidable loading waits. They do not establish a measured improvement in hosted request latency or initial bundle download time. ## Model Used OpenAI Codex, based on GPT-6, with reasoning, repository tools, code execution, and browser automation. The exact serving revision and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Scott Tong <scott@scottsmbpm5max.lan> Co-authored-by: Paperclip <noreply@paperclip.ing> |
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7c0922a7b6 |
fix(native): preserve provider backups during slow workspace saves (#19359)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Remote native sessions save provider state so another web server can continue the same conversation. > - A provider can suspend while its accepted result is still saving a large workspace. > - The run has released its live lease at that point. A new backup-owner lookup rejects this uncommitted state. > - This pull request captures the real owner during backend creation and retains it with the current session authority. > - The existing database checks still reject a changed boot, generation, result, or successor before inspection and during publication. > - The benefit is that a slow workspace save no longer prevents the provider backup. ## Linked Issues or Issue Description **What happened?** A remote session can fail to save its provider backup with `native_harness_storage_owner_missing`. The provider has suspended, but its accepted result is still in `workspace_finalizing`. The close callback tries to acquire a new owner after the run released its lease. A later allocation cannot use a backup that was never published. **Expected behavior** Save the suspended provider with the authority acquired during execution. Recheck that authority before provider inspection and before and after upload. Keep result finalization and provider-work permissions unchanged. **Steps to reproduce** 1. Start a remote native session with durable provider storage. 2. Accept its result and release the live lease while its workspace save remains pending. 3. Close the provider transport. The old owner lookup rejects the save before provider inspection. **Paperclip version or commit** Reproduced on master `bf10bc695abaef6b20e85b287f456b5ce2edb266`. **Deployment mode** A web server with object storage and remote managed Runner sessions. Related: #19225 retains failed-turn ownership through close. #18436 restores an external controller checkpoint before a changed warm process is replaced. This change fixes late backup-owner acquisition while an accepted result saves its workspace. ## What Changed - Capture the provider backup owner when the remote backend still owns its execution lease. - Bind that owner to the current session authority. An older close callback selects the current warm attachment's owner. Revalidate the captured fence before inspecting or skipping provider state. - Add a regression for the close callback during workspace finalization. - Restore encrypted provider files with a captured owner while workspace finalization remains pending. Reject boot, generation, result, and successor changes during upload. - Document the ownership contract. ## Verification - Observed the callback regression fail on the old code with `native_harness_storage_owner_missing`. The same test passes with this fix. - `cd server && node ../node_modules/vitest/vitest.mjs run --config vitest.config.ts src/services/native-runtime/native-harness-backup-storage.integration.test.ts`: 59 passed, using real PostgreSQL and encrypted object write/readback. - `node scripts/check-module-boundaries.mjs`: passed. - Full workspace typecheck: passed with the complete production fix. - Native execution: 1,151 passed. Managed warm lifecycle: 9 passed. These tests require a lost-owner error during shutdown, including before an incomplete provider checkpoint is skipped. The final change to the lifecycle test also requires rejection after lease renewal is lost. - Full local `pnpm build`: passed on the final head. - The full local `pnpm test:run` stopped in chat shard 6 on five existing deadline assertions. Earlier chat shards passed; the PR CI chat shards passed. This is not a full local-suite pass. - The first CI server shard 4 attempt failed the unchanged legacy environment-inheritance fixture at its five-second completion wait. The same failure reproduced locally on the repair head and on an earlier checkout without this repair. One unchanged CI retry passed. No fixture assertion or timeout change is shipped. - Latest-head CI has passed. Greptile reviewed the final head at 5/5 with no open threads. The separate Paperclip Review is paused. This PR does not claim staging acceptance. ## Risks The backup owner now lives with its session authority. A wrong authority selection must fail rather than publish provider state. Database publication still checks the original company, task, run, boot, generation, and accepted result before and after upload. Tests change the owner during upload and verify that the selected backup stays intact. No schema, data migration, or new provider-work permission changes. ## Model Used OpenAI Codex, GPT-6 model family, with reasoning and code execution tools. The host does not expose the exact runtime model ID or context-window limit. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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5ac05871b5 |
fix(onboarding): unify sign-in actions and recover failed logins (#19336)
## Thinking Path
> - Paperclip lets people create agents and connect their AI accounts.
> - Onboarding uses the shared login panel to connect Claude and OpenAI
accounts.
> - The sign-in link did not update the footer, so the footer could open
sign-in again.
> - A failed or expired sign-in also left onboarding without a retry
action.
> - This pull request gives both sign-in controls one action and makes
failed attempts recoverable.
> - Users can return with a code or start a fresh attempt while keeping
their setup.
## Linked Issues or Issue Description
**What happened?**
The onboarding instruction link opens Claude but leaves the footer
offering Sign in to Claude. If a code is entered without a paste event,
the footer opens provider sign-in again. A failed code, expired session,
or failed sandbox request can also leave an error with no retry control.
Component tests reproduce these failures.
This PR addresses that explicit footer action. It does not establish a
fix for unsolicited navigation of the original Paperclip tab to Claude
before code entry. That reported hosted-Cloud behavior remains under
investigation and needs browser-level evidence.
**Expected behavior**
The link and footer should use the same sign-in action. Both should open
one provider tab and put the footer into a disabled Waiting for code…
state. The code field should stay available. Failed or expired attempts
should show a clear message and an enabled Retry sign-in button.
**Steps to reproduce**
1. Choose Claude during onboarding with no saved subscription login.
2. Open Sign in to Claude from the instruction link.
3. Return and enter the authorization code without a paste event, such
as by typing it.
4. Press the footer action. Before this fix, it opens Claude again.
**Paperclip version or commit**
Reproduced in component tests against master at
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002455ea06 |
fix(issues): finish a reassignment whose native stop settles after the request (#19354)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - A user can stop or interrupt a running native task and then send a message to give new direction > - When the stopped run left a workspace hold, the dispatch gate withholds the follow-up run until recovery saves the work > - The gate must save the user's message on its receipt so that the deferred-receipt worker continues it after recovery > - Two conditions made the gate skip the message instead of saving it, so the task stayed in progress with "Saved work recovered. Send a message to continue." although the user already sent one > - This pull request saves the message in both conditions > - The benefit is that the message the user already sent continues once, automatically, after recovery ## Linked Issues or Issue Description **What happened?** After a user stopped or interrupted a native task with an isolated sandbox workspace and sent a message, the follow-up run was cancelled with `execution_reconciliation_required`. Its error said "Saved work recovered. Send a message to continue." Nothing re-woke the task. In the interrupt case, a periodic sweep started a run about four minutes later. In the case where the follow-up first waited for the stopped run's workspace save (`workspace_busy`), each later retry parked on the same resolved recovery action, and the task did not continue. **Expected behavior** When the recovery that the follow-up waited on resolves, the message that the user already sent continues once, automatically. The product does not ask for a second message. **Steps to reproduce** 1. Run a native task in a managed sandbox with an isolated workspace. 2. Stop the run (or send a comment with interrupt), then send a message while the stop and workspace save are still settling. 3. Wait for the workspace recovery to resolve. 4. See that the follow-up run is cancelled with `execution_reconciliation_required` and that no run continues the message. **Paperclip version or commit** `master` before this change. **Root cause** `deferUnstartedUserComment` (run dispatch) refused to save the withheld message in two cases: 1. It compared the message time with the source run's `finishedAt`. A native run finishes only after its provider stop and workspace save settle, which takes seconds. A message written after the Stop request but before that settlement was treated as input written before the Stop. The receipt was marked `skipped`. 2. It required the run's own receipt to be user-owned. A workspace-busy retry or an admission retry carries the user's message under a system-owned receipt, so the message was dropped with the retry. ## What Changed - Add `userStopBoundaryAt(run)` in `run-cancellation.ts`. For a run cancelled by a user Stop or interrupt, it returns the recorded Stop request time (`cancellation.recordedAt`) when that is earlier than `finishedAt`. For all other runs it returns `finishedAt`. - Use this boundary in the dispatch gate's message deferral, in native explicit-continuation admission, and in the remote-Stop continuation check, so the three places agree on "message written after the Stop". - When the withheld run is a system-owned retry, walk a bounded chain (max 8) of retries that did not reach the provider (`workspace_busy` with `providerWorkStarted: false`, or a verified pre-dispatch `execution_reconciliation_required`) to the originating user receipt. Save the message on that receipt with the user's original wake context. Mark the retry's system receipt `skipped`. - Update the "input written before the Stop" test so that the Stop request, and not only the settlement, comes after the message. ## Verification - New regressions in `server/src/services/workspace-recovery.test.ts` (`continues a message ... without a second message, after recovery already resolved`): a direct follow-up and a workspace-busy retry. Each runs recovery to completion first, then lets the gate withhold the follow-up, then runs only the deferred-receipt worker. Each asserts that exactly one successor run is queued with the user's message and the user's authority, and that no provider work starts. - Red before the fix: both tests fail because the receipt is `skipped` instead of `deferred_issue_execution`. Green after the fix. - `npx vitest run src/services/workspace-recovery.test.ts` (384 passed). - `npx vitest run src/services/explicit-native-continuation.test.ts src/modules/run-dispatch src/services/execution-continuation.test.ts src/services/run-cancellation.test.ts` (581 passed). - 19 more heartbeat, retry, queued-comment, and native recovery suites (1272 passed). One failure, `heartbeat-process-recovery > redacts opaque environment-bound credentials from Sentry diagnostics: result`, also fails on unchanged `master` and is not related. ## Risks - A message written after the Stop request but before the stopped run settled now continues. The stopping run cannot consume new input after its Stop request, and admission still removes comments that a run already delivered (`undeliveredLegacyUserCommentIds`). All admission gates (holds, stop proofs, approvals, budget) still apply. - Only user Stops and interrupts move the boundary. Other cancellations keep `finishedAt`. - The retry walk is bounded, stays in one company, agent, and issue, and accepts only retries without provider work. It revives a user receipt only from `cancelled` or `skipped`, so a second retry cannot save the same receipt twice. - Not in scope: a run that fails during native preparation with no user message (for example `runner_state_identity_mismatch: prior_owner_terminal_state_indeterminate; retirement_refused=unexpected_root_entry` on a system wake). After its recovery resolves, the task still waits for a user message. That is a separate root cause in the native session executor's prior-owner retirement proof. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, used through Claude Code with tool use (shell, file edits, local test runs). ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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f9d366acdf |
fix(runner): require a managed AI connection for plugin Runner-task environments (#19341)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - A plugin can provide Runner execution through an environment driver that declares `supportsTasks: true`. Agent computers use this path. > - Core let an agent without a managed AI connection run on that path. The run then used the account that was installed on the plugin's execution host. > - That is not a supported credential source. When the host Runner did not match, the run failed three times, 30 seconds apart, and then blocked the task with a generic error. The error did not name the fix. > - The plugin cannot refuse these runs itself. `describe` has no connection data, and Core replaces plugin error text before the user sees it. > - This pull request makes a managed AI connection a requirement for every plugin Runner-task environment. Core refuses a run without one before it acquires a lease or calls the plugin. > - The benefit is one clear notice that tells the operator to choose an AI connection, and no wasted retries or plugin work. ## Linked Issues or Issue Description Refs #19326. That pull request makes a Runner revision mismatch retry. It noted that runs without a managed AI connection reach the Runner check on a different path, which still blocks after 3 attempts. This pull request removes that path for plugin Runner-task environments. **Problem or motivation** A `paperclip_runner` agent with no managed AI connection can run in a plugin environment that provides Runner tasks. The run uses the account installed on the execution host. If the host Runner does not match, the native session retries 3 times and then blocks the task with "Plugin-provided Runner execution operation unavailable". The operator cannot tell what to fix. **Proposed solution** Refuse these runs in Core before any lease, plugin call, secret resolution, or provider work. Use one stable reason, `ai_connection_required`, for run admission, the setup probe, and agent verification. Show a task notice that names the fix. **Alternatives considered** A refusal in the plugin. It cannot see the connection at `describe`, which runs first. Its error text is also replaced twice before the user sees it. A new structured plugin error code would still not cover `describe`. ## What Changed - Add `server/src/services/plugin-runner-ai-connection.ts`. It holds the `ai_connection_required` code and message, the probe result, and the manifest lookup for a Runner-task driver. The lookup moves here from `agent-runner-selection.ts`, so run admission and runner selection use the same rule. - `heartbeat/execution-configuration.ts`: refuse a new `paperclip_runner` run in a Runner-task environment when it has no managed AI connection. This also applies when `homeMode: "preconfigured"` drops the connection. The run fails as `configuration_incomplete` with reason `ai_connection_required` and an action URL to the agent's runtime settings. The check runs before observability, secrets, the managed runtime, the workspace, and the lease. A resumed native run keeps its admitted contract. - `recovery/stranded-notice.ts`: add an "AI connection required" task notice. - `run-failure-report.ts`: treat this pre-dispatch refusal as an owner action, not an unexpected failure. - `adapters/registry.ts`: the unmanaged probe for a Runner-task target now returns a failed `ai_connection_required` check. It calls no task operation. Managed probes still go through `testManagedEnvironment`. - `agent-harness-verification.ts` and `agent-lifecycle/application/failure.ts`: classify the check as `ai_connection_required` with a fixed message. Verification waits for the configuration to change instead of retrying. - Docs: `PLUGIN_RUNNER_EXECUTION.md` states the requirement. `PLUGIN_ENVIRONMENT_TASKS.md` no longer mentions installed accounts. `agent-config-ui.md` notes the requirement. - Tests: the "plugin-owned account" heartbeat test described the behavior that this change removes. It now checks the assembled heartbeat refusal: no plugin call, no native boundary, no adapter, no workspace files. ## Verification - `npx vitest run` in `server/` for these files. All tests passed: - `src/__tests__/heartbeat-execution-configuration.test.ts`. New cases: refused without a connection, refused for a preconfigured home, managed passes, resumed native input passes, non-task plugin driver passes. The refused cases also check that observability, secrets, and the managed runtime did not start. - `src/__tests__/heartbeat-plugin-environment.test.ts`. One test, "inherits the instance default environment across companies…", also fails on unmodified `master` in my environment. This change does not touch it, because its driver does not declare `supportsTasks`. - `src/adapters/registry.test.ts`, `src/__tests__/agent-harness-verification.test.ts`, `src/modules/agent-lifecycle/__tests__/diagnostics.test.ts`, `src/services/recovery/stranded-notice.test.ts`, and `src/services/__tests__/run-failure-report.test.ts`. - 17 more suites that use plugin Runner-task environments, with 705 tests: `plugin-runner-task.integration`, `plugin-warm-tasks.integration`, `task-creation-recovery.integration`, `native-startup-cleanup-recovery`, `environment-task-authority.integration`, `plugin-task-credential-writeback`, agent-lifecycle `lifecycle`, `setup`, and `environment-plugins`, `workspace-preparation`, `agent-runner-selection`, `agent-harness-verification-provider-api`, `agent-harness-verification-remote`, `plugin-environment-driver-seam`, `environment-task-runtime`, `agent-test-environment-routes`, and `adapter-registry`. - `pnpm typecheck` in `server/` reported no errors in the changed files. Its only errors came from sandbox-provider packages that my local install did not link. - Not run: `plugin-runner-probe.test.ts`, because it needs a Cargo build. This change does not modify `probePluginRunnerEnvironment`. Also not run: the full `pnpm test:run` and `pnpm build`. CI runs them. ## Risks - Behavior change: an agent in a plugin Runner-task environment with no managed AI connection now stops before dispatch. Before, it ran with the host's installed account. The agent's owner must choose an AI connection. This includes agents with `homeMode: "preconfigured"` in these environments. - Runs that were already admitted and resume from saved native input are not refused. They keep the earlier behavior until they finish. - The check reads the plugin manifest on each new run admission for plugin environments. This is the same lookup that runner selection already does. - This pull request and #19326 both edit `stranded-notice.ts` and `failure.ts`. The changes are additive, but whichever merges second needs a small rebase. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, in Claude Code with tool use (file edits, shell, test runs). Default context window, extended thinking on. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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bf10bc695a |
feat(task): show the agent's context window in task properties (#19273)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Agents run through a harness (Codex app-server, or Claude through ACPX), and the runner turns harness events into Paperclip events > - Both harnesses report how full the model's context window is. Codex sends `modelContextWindow` with its token usage. Claude sends `used` and `size` in ACP `usage_update` > - Paperclip dropped both values. The task view could not show how close an agent is to compaction, and a compaction left no visible mark in the task chat > - This pull request carries the context-window occupancy through the runner, stores it with the existing usage events, and shows it as a "Context" row in the task Properties panel > - It also shows a "Context compacted · 230k → 38k tokens" divider in the task chat when the agent compacts its context > - The benefit is that operators can see when a long task is near its context limit and when the agent lost detail to a compaction ## Linked Issues or Issue Description Refs #19252 (same pattern: a canonical harness event turned into task-chat UI). Refs #19267 (status notices; it turns Claude's compaction banner into a notice, and this PR reads that notice too). **What existing behavior does this improve?** The task view shows no context-window information, and a compaction is invisible in the task chat. **Subsystem affected** Runner usage normalization (Rust and TypeScript transport), the PRP usage schema, a read-only issue API, the task Properties panel and the task-chat transcript. **Current behavior** Codex `modelContextWindow` and ACP `used`/`size` are dropped in the runner. `context.compacted` always has null sizes, Claude compactions emit no `context.compacted` event at all, and the live runner turn hides every marker except "interrupted". **Proposed behavior** `usage.reported` carries an optional `context {usedTokens, windowTokens}`. The task Properties panel shows a Context row ("10% of 258k") with a hover breakdown (tokens used, input and cached input, output, cost, compactions). The transcript shows a compaction divider, with sizes from the usage before and after the compaction. **Reason and benefit** Operators can see when a long task is close to its context limit, and they can see where the agent's earlier context was summarized. **Breaking changes** None. The new schema field is optional, and the new endpoint is read-only. ## What Changed - PRP `usage.schema.json`: add an optional `context {usedTokens, windowTokens}` object. Regenerate the schema bundle and the protocol manifest. - Rust `provider_events.rs`: add `codex_context_usage` (last request `totalTokens` and `modelContextWindow`) and `acpx_context_usage` (ACP `used`/`size`). ACPX `usage_update` now sets `context`. - Rust `provider_backend.rs`: Codex `thread/tokenUsage/updated` sets `context` on live (non-historical) usage. - Rust `provider_events.rs`: emit `context.compacted` for the completed `context_compaction` provider notice that #19267 produces from Claude's compaction banner. Only this path marks a Claude compaction, so the server counts each compaction once. - `runnerd-codex-transport.ts`: `rehydrateRunnerdUsageNotification` keeps a valid `context` on `tokenUsage`, so it reaches the stored `item.completed` usage item. - Server: new `GET /api/issues/:id/context-usage` (issue read access is required) and `issueContextUsage` service. It reads only the assignee's current session (the session of its newest usage report), and returns that session's latest context reading, non-zero totals, cost, and the count of compactions across all of the session's runs. Added to OpenAPI. Shared type `IssueContextUsage`. - DB: migration 0432 adds two partial indexes on `heartbeat_run_events`, built concurrently. One indexes usage items by run and time. The other indexes `context.compacted` events by company and session. `EXPLAIN` shows that both lookups use them. - UI: new `ContextUsageMeter` (bar, percentage, hover card) and `IssueContextUsageRow` in the Execution section of Properties. The row refreshes every 8 s while a run is active, and once more when the run ends. - UI transcript: `native-run-events.ts` maps `context.compacted` to a `context` activity entry with pre/post sizes from neighbouring usage items. `transcript-adapter.ts` turns it into a new `context_compacted` marker variant. The live runner turn keeps that marker as its own timeline row. - Storybook: `task-context-window.stories.tsx` (Properties panel in a task, all states, hover breakdowns, divider). ## Verification - `cargo test -p paperclip-runner-core --lib provider_events` (new tests: ACPX context, Codex context, banner compaction, notice compaction) - `pnpm --filter @paperclipai/paperclip-runner exec vitest run src/live/runnerd-codex-transport.test.ts` - `cd ui && npx vitest run src/components/ContextUsageMeter.test.tsx src/components/transcript src/components/task-chat src/components/issue-properties` - `cd server && npx vitest run src/__tests__/issue-context-usage.test.ts` (embedded Postgres) - `node scripts/typecheck-low-memory.mjs`, `pnpm check:token-gates`, `pnpm --filter @paperclipai/paperclip-runner run check:protocol-types` - Live check on a local worktree instance through the runnerd path: - A Codex `gpt-5.5` task showed "10% of 258k" (27k of 258k, input 77k with 49k cached, output 1.1k). - A Claude Sonnet 4.6 task showed "17% of 200k" (34k of 200k). - Storybook: Tasks and conversations / … / Task chat / Context window. - Not verified live: a real compaction. The divider is covered by unit tests through the same projector path the task chat uses. ## Risks - The schema field is optional, and older runners omit it. The UI renders nothing until a harness reports a window. - Migration 0432 builds two partial indexes concurrently on `heartbeat_run_events`, which is a large table. The indexes cover only usage items and compaction events, so they stay small. They add a little write overhead to those events. - Claude in-progress usage rows still record zero tokens with `requests: 1`. The final turn usage is correct. This PR does not change accounting. - A "Compact now" action is out of scope. It needs a compaction-only run that does not produce a run result. It will come in a follow-up. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, used through Claude Code with tool use (shell, file edits, in-app browser for Storybook and the live instance). ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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a6ab6a301c |
fix(server): retry a run when its remote Runner is out of date (#19326)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work
> - An agent can run on a remote Runner that an environment plugin
provides
> - A release can update the app before the remote Runner, so for a
short time the app sees an older Runner
> - In that window the plugin can refuse the task, but Core cannot tell
this refusal from other errors
> - Today the run fails as `setup_failed` with no retry, and the task
goes to board recovery. Before #19246, it was also reported as a project
authentication conflict
> - Agent verification also counts the refusal as a failed harness test,
and it parks the agent after three tries
> - This pull request gives the plugin a stable error code for a Runner
mismatch, and Core waits and retries when it gets that code
> - The benefit is that a release no longer blocks tasks or parks
agents, and a real authentication conflict keeps its own clear notice
## Linked Issues or Issue Description
Refs #19246 (it stopped reporting every precheck error as a project
authentication conflict)
Refs #19249 (the same bounded bootstrap retry for a stopped plugin
worker)
Refs #19302 (shares `environment-task-error.ts`; its diagnostic envelope
is unchanged)
Refs #19172 (related open PR: it reports an undescribable plugin Runner
as a retryable check in the same precheck)
Refs #18667 (a real `ai_connection_incompatible` conflict, which now
gets its own notice)
**What happened?**
A run started while its remote Runner was older than the app. The
environment plugin refused the task because the installed Runner did not
match the revision it expects. Core recorded a generic setup failure,
scheduled no retry, and blocked the task. Before #19246, Core reported
this as a project authentication conflict. An agent in `verifying`
counted the same refusal as a failed harness test. After three tries it
stopped verification until a person chose Retry.
**Expected behavior**
Core treats a Runner mismatch as temporary. A run retries without
blocking its task. A `verifying` agent checks again until the Runner
matches. Only a real `ai_connection_incompatible` result blocks the
task, with a notice that names the conflict.
**Steps to reproduce**
1. Use an agent on a plugin environment whose installed remote Runner
revision differs from the revision the plugin expects.
2. Wake the agent on a task, or put a new agent through verification.
3. The run fails with `setup_failed` and the task is blocked.
Verification parks after three tries.
**Paperclip version or commit**
master at
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789a71bc17 |
fix(runner): retry quarantined tasks in their saved workspace (#19340)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Native sessions retain execution ownership and action history across turns. > - Task Retry must prove that old execution has stopped before it starts another turn. > - An attempt can inherit its predecessor's identity and fail before it launches a provider. > - The cleanup proof searched under that failed attempt and compared unrelated event sequences. > - This pull request verifies the retained owner and starts one fresh authorized turn. > - Saved results and uncertain action outcomes remain intact. ## Linked Issues or Issue Description **What happened?** Task Retry accepted repeated clicks but kept the canonical request deferred with `executionWait.reason: local_cleanup`. It created no successor, although the retained local worker and provider had stopped. **Expected behavior:** After exact cleanup proof, admit one fresh turn. Preserve the old journal and result. Keep unresolved action outcomes unknown. **Steps to reproduce:** 1. Finish a local native turn with retained cleanup state and a saved result. 2. Let the next attempt inherit its identity and fail with `native_session_cleanup_quarantined` before any launch. 3. Upgrade across a tool-contract change, then click task Retry. 4. The old code requires the failed attempt's stop receipt and journal identity. It also requires the current tool fingerprint and equal sequence numbers across raw and normalized events. Those requirements cannot match the retained owner. **Paperclip version or commit:** Reproduced on `31bf6e4482`. **Deployment mode / installation method:** Authenticated, self-hosted source checkout. **Agent adapter(s) involved:** Native `paperclip_runner`, local Codex app-server. The shared physical-stop proof also covers ACPX. **Database mode:** Embedded PostgreSQL 18.1. **Access context:** Board task Retry. **Node.js version / operating system:** Incident: Node 24.20.0, Linux ARM64. Local verification: macOS ARM64. **Relevant logs or output:** Accepted Retry stays in `deferred_issue_execution`; no new run or provider launch occurs. **Relevant config:** Per-turn local native execution. The old tool contract differs from the current contract. **Additional context:** Related: #19311 prevents the oversized tool result that can lead to retained cleanup. #18217 covers broader cleanup isolation and retained-result maintenance. #19134 admits stopped Runner sources under the current run lease. This patch fixes explicit continuation admission on current master. ## What Changed - Resolve the retained journal's owner under the same company, task, agent, workspace, native session, and runner instance. - Require terminal ownership, settled controllers, released local leases, and exact inherited process birth. Refuse any launch evidence on the failed attempt. - Accept a current host's verified process absence from its exact launch receipt when an older server lacks a stop receipt. A later launch invalidates that observation. - Validate normalized receipts against their own IDs, sequences, and digests. Match ordered provider identities to the independent raw journal. - Keep tool compatibility at the session reuse boundary. Explicit continuation always uses a fresh session. - Bind the stop proof to its exact successor and canonical Retry receipt. Reuse the proven local workspace through normal preparation. Refuse changed bindings, closed or remote workspaces, pending operations, and other live leases. Projectless run-ID placeholders keep the existing fresh-workspace fallback. - Retain journals, results, files, and uncertain action outcomes. Add regression and opt-in live acceptance coverage. - Make the split-handoff browser test wait for both child-completion notices and all run settlement before teardown. Assert the final task set stays unchanged. ## Verification - Red: canonical Retry on the original code accepts one saved intent but creates zero successors and records `local_cleanup`. - Red: distinct raw and normalized event sequences reproduce that wait after owner resolution alone. After admission was repaired, live acceptance then exposed the empty-attempt workspace problem. A PostgreSQL regression also reproduced that wrong workspace selection. - Green at `6684df5e82`: **479 targeted cases**, including 26 new PostgreSQL cases for duplicate clicks, exact process and workspace ownership, controller/lease fences, changed state, and independent receipt integrity. The complete 1,150-test native executor suite passed earlier. - `pnpm -r typecheck` and `pnpm build` pass again at final head `432a52bea8`, including its build stamp. Token gates pass. Master now contains the unrelated directory-fixture type correction found during the first typecheck. - Real authenticated HTTP Retry with Codex `gpt-6.1-sol`, high effort, and per-turn execution passes again at final head `432a52bea8` (93.3 seconds). It preserves the first file line, appends the second once, starts a fresh session in the existing workspace, keeps the retained journal unchanged, commits finalization, and clears task locks. - The strengthened split-handoff browser scenario passes **three consecutive local runs**. Its original CI teardown and one same-head rerun failed when cleanup cancelled an active legacy completion-notification run and hit a PostgreSQL row-lock timeout. The scenario now waits for the complete handoff before cleanup. [Initial failure](https://github.com/paperclipai/paperclip/actions/runs/42106466518/job/127523693634), [same-head rerun](https://github.com/paperclipai/paperclip/actions/runs/42106466518/job/127531698321). These failures remain part of the verification record. - The local full `pnpm test:run` passed all six chat integration shards. Its obsolete pre-rebase attempt was stopped during the general server phase; no complete local-suite pass is claimed. Full CI, including both required gates, passed at `6684df5e82`. At final head `432a52bea8`, all initial CI groups passed except the unchanged status-card deadline test, whose post-wakeup clock assertion missed its bound by 10 ms. That exact case passed three unchanged local repetitions (16.8/27.0/18.3 seconds); the single isolated shard rerun passed all **2,218 tests** (123 files), with no source changes. [Initial timing failure](https://github.com/paperclipai/paperclip/actions/runs/42114473652/job/127550722187). - Greptile reviewed `6684df5e82` at **5/5**, with no actionable findings. A second reviewer identified the supported projectless placeholder case. A new real PostgreSQL regression reproduced its workspace-binding failure before the one-line fallback correction; all **45 focused cases** now pass, including default environment selection and changed binding/cwd refusal. Greptile reviewed final head `432a52bea8` at **5/5**, with no blocking findings. The second reviewer’s thread is resolved. - The patched Linux build verified the actual retained worker/provider ownership and process absence in a transaction that was rolled back. No retained state was retired or provider started during that pre-deployment check. ## Risks - This changes an execution admission proof. Incorrect ownership could permit a second executor. The proof retains process, controller, lease, scope, journal, and receipt fences, and duplicate admission is tested through the real queue. - Missing or conflicting evidence remains deferred. Windows, remote execution, automatic replacement, and session reuse retain their existing policies. - No database migration or UI change. The original affected task still needs deployment of the fix before recovery can be claimed. ## Model Used - OpenAI GPT-6 through Codex, with reasoning, repository tools, code execution, SSH diagnostics, and live provider testing. This session does not expose the exact backend model build or context-window size. The live test agent uses OpenAI `gpt-6.1-sol` at high effort. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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15249a689d |
fix(server): preserve sessions across cosmetic sandbox updates (#19349)
## Thinking Path > - Paperclip manages agent work and saves provider sessions between turns. > - Session and workspace compatibility include the selected environment revision. > - The managed sandbox reconciler also updates names, descriptions, and stock metadata. > - Those cosmetic updates advanced the revision even when the execution configuration stayed the same. > - A later turn therefore discarded an otherwise compatible saved session. > - This pull request keeps that revision stable for cosmetic reconciliation and retains resets for real configuration changes. ## Linked Issues or Issue Description Related: #18943 and #18552. **What happened?** A managed sandbox rename or description update made a later task turn start a fresh provider session. The driver, provider, snapshot, and agent configuration could all remain unchanged. Both session and workspace freshness use the environment's `updatedAt` as its configuration revision. **Expected behavior** Cosmetic managed reconciliation preserves compatible task sessions. Actual sandbox configuration or availability changes retain the normal replacement checks. **Steps to reproduce** 1. Create a managed sandbox and save a task-session fingerprint for it. 2. Reconcile the same sandbox configuration with a new name, description, or managed metadata. 3. Evaluate the saved session against that environment. Before this fix, the decision resets the session and reports the environment category. **Paperclip version or commit** Reproduced on master `d3713d827f70ddba63a323e57c562384dbd648ba`. **Deployment mode** Managed sandbox server. The regression uses an isolated PostgreSQL database and the actual reconciler and session-freshness resolver. ## What Changed - Keep the existing revision for an active managed sandbox when its execution configuration stays equal. - Continue advancing the revision when configuration or availability changes. - Retain activity records and managed-stock binding updates for cosmetic reconciliation. - Add a regression that checks session reuse, audit history, and rejection after a real snapshot change. - Document the freshness contract. ## Verification - The new PostgreSQL regression failed before the production change: it reported `reset: true` and changed category `environment`. - All 53 environment-service cases pass after the fix. - All 190 session-freshness and assembled heartbeat session-preparation cases pass. - Full local typecheck passes. The full local Vitest run remains active, with its local build queued afterward. Initial typecheck setup failures were retained and resolved by repairing generated SDK links; no source workaround was added. - [Full current-head CI](https://github.com/paperclipai/paperclip/actions/runs/42114984839) passes, including the sharded test suites and build: 55 successful checks, 3 skipped, and 1 neutral. - Greptile and Ponytail both reviewed this commit at 5/5 with no findings. No review threads remain unresolved. - Deployed verification remains pending normal delivery. No pinned release or manual rollout is required. ## Risks - Cosmetic managed reconciliation keeps `environments.updatedAt` unchanged, so it does not reorder that environment by this timestamp. Activity records and managed-resource bindings still record the update. - The comparison uses canonical configuration hashes, so JSON property order cannot hide a real change or create false drift. - Existing fingerprint formats and saved session records remain compatible. Real configuration and availability changes still advance the revision. ## Model Used OpenAI GPT-6 through Codex desktop, with reasoning and terminal/browser tools. The host does not expose a more specific deployment suffix or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |