5 Commits

Include renames

Author	SHA1	Message	Date
DottaandPaperclip	92b238137b	Connect and configure GitHub Copilot through Apps (#15705) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Apps and AI Connections store credentials and govern access to agent runtimes. > - Users need a supported saved-token connection and config values that survive save and reopen. > - The release must preserve saved-token access and task lifecycle guarantees. > - This pull request will connect Copilot through the normal Apps and AI Connections path. > - The benefit is a reviewable part of the Copilot production release. ## Linked Issues or Issue Description Refs #15701 and #15703. Supersedes setup work in #15562. Base: #15703. Next: #15706. ## What Changed - Require configuration update authority before Copilot credential-bearing model discovery; default to the saved environment and preserve explicit selection for editors. - Keep Copilot discovery passive during reconnect reconciliation; refresh on explicit opening, account/environment changes and reconnect. - Add GitHub AI token connections with encrypted storage, ownership, grants and audit logging. - Keep repository access separate from Copilot runtime authentication. - Probe the selected environment without sending a model prompt and preserve authenticated model selection through save/reopen. - Keep fresh execution admission consistent with normal Copilot setup; persist task model choices without changing provider or permission policy. - Refresh authenticated models after reconnecting the same saved Copilot account, including recovery from a previous authentication error. - Apply the additive provider-default constraint migration through the normal generated migration workflow. ## Verification Runtime #15701 is merged at `d855e550ad8d2a267312983f26457aabf5393c3a`. History #15703 is merged at `df80616d98119cbf5abd40549794d9980a5fabf6`. Remaining source [`42bcbd61299655f7e37aabe6bb5f19bba770ad1d`](https://github.com/paperclipai/paperclip/commit/42bcbd61299655f7e37aabe6bb5f19bba770ad1d) contains the four-file authorization repair. The remaining PR trees preserve six nonoverlapping files from the newer public mainline managed-settings fix and the CI-owned lockfile. No unrelated provider is enabled. The security finding is repaired: existing-agent discovery requires `agent_config:update` before connection selection or token resolution. The saved environment is the default. Authorized editors can select a prospective environment. Both denied board-viewer and agent-reader regressions fail on the original source. All49 route tests and server typecheck pass with the fix. Denied requests perform no connection selection, credential resolution or probe. Current-head security scans pass on both remaining PRs; the repaired thread is resolved. Copilot CLI1.0.88 and profile47 retain digest `sha256:55044aa235e88b3fe36ec8a556ee1e3382590870aab907e4462ef7d64af49cea`. The [qualification record](https://github.com/paperclipai/paperclip/blob/42bcbd61299655f7e37aabe6bb5f19bba770ad1d/doc/plans/2026-10-20-copilot-qualification-v47.json) reports20/20 Product cells,154 assertions and7/7 protocol cases,46 assertions against frozen normal installed source `c2616370800f5f6df45246b0890ba35a7cd2faab`. The exact qualification model is `gpt-5.6-luna`. Every passing Product case confirms cleanup. Original failures remain recorded; automatic behavior retries are disabled. The route-only authorization repair changes no bound runtime/profile bytes and does not relabel the frozen campaign. The ordinary installed remote journey passed saved-token selection, model discovery, normal UI save/reopen, metadata-only Test, completed task, accepted receipt and exact19-byte browser download. An open model catalog caused no additional discovery requests during117seconds. Actual installed runtime smokes passed on macOS ARM64, macOS x64 under Rosetta and native Linux x64 on Daytona. Raw token browser entry was not exercised; encrypted connection creation used the normal API. The first Daytona file attempt timed out during delayed semantic dispatch; its precise stalled layer remains unresolved. Independent ordinary remote delivery and the other19 Product cells passed before one instrumented recheck passed8/8 with unchanged source,prompt,assertions and deadlines. No causal latency repair is claimed. Before the authorization repair, all four final PR heads passed required verify/E2E and fresh Greptile5/5 reviews with zero unresolved threads. Current-head CI/review is running for the two repaired heads. Local focused checks retain129 connection,59 runner,72 shared-eval and88 recovery/workspace passes, plus migration safety and token gates. The additive Copilot migration is361; released master history is preserved. [Cloud normal-package run39414239704](https://github.com/paperclipai/paperclip/actions/runs/39414239704) builds the pre-security source4f3f. All four native producers and Linux package assembly pass; the final clean installed consumers are finishing. All18 retained archives match their hashes;37,863 regular files contain zero selected credentials. That package does not contain the later route repair. The actual final published package must include it and pass the local/Daytona live canaries. The frozen Daytona image remains published and independently verified. No separate full-image scan is claimed. Docker builds run in the cloud. **Remaining:** current-head CI/review, setup and qualification merges, final publication, and ordinary local/Daytona canaries against the actual shipped package. The user explicitly authorizes the maintainer review override; CI remains a merge gate. No production deployment is claimed. Provider USD remains unknown and GitHub-attributed. ## Risks Bad credentials, missing entitlement, runtime installation and unavailable models must remain distinct failures. A connection must not adopt ambient credentials. The constraint migration changes accepted provider values, with no credential-storage migration. Current-master NewAgent fixture extraction is retained. Copilot cases use that shared support and test both passive discovery and explicit reconnect under the same setup lifecycle. The onboarding retry regression shares the component suite’s saved-connection, authenticated-model, draft, agent-list, hire and render lifecycle fixtures. Keeping it beside the existing onboarding failures makes adoption versus duplicate hire observable under the same lifecycle; this is the concrete cohesion reason for the existing large test file. ## Model Used OpenAI Codex, based on GPT-6. The exact serving model ID and context window are not exposed in this task. Used for code changes, review and tool-assisted verification. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-20 07:02:22 -05:00
DottaandPaperclip	8193abb936	feat(claude): default qualified macOS and Linux targets to Paperclip Runner (#15997) ... ## Thinking Path > - Paperclip must run the selected agent on its selected host. > - Claude needs verified packages for each supported target. > - A Mac controller must select the correct Linux provider pack. > - New defaults must follow package and execution evidence. > - This PR adds Claude platform packaging and target-specific pack selection. > - Existing Codex Linux ARM64 behavior remains intact. ## Linked Issues or Issue Description Refs #15683. This PR depends on #15993 and #15994. Related scope: #15422 and #15224. ## What Changed - Reuse the merged four-target daemon producer/consumer matrix. Add target-owned Linux provider packs and carry their immutable identities through release assembly and vendoring. - Reuse master’s landed pinned Claude SDK ARM64 executable admission and retain package-integrity, architecture and no-follow admission. - Select target-specific remote packs so Mac controllers can use Linux hosts without a development pack override. - Preserve read-only runtime context on SSH startup and resume without accepting unverified old content. - Check ordinary installed Claude readiness without injected package authority. Retain Codex and Linux x64 consumer checks. - Extend Claude automatic target selection for the remaining qualified package targets. Retain unsupported-platform and external-override behavior. - Qualify managed Daytona snapshot names through provider IDs during Claude Connect. Pin native acquisition to the measured ID. Preserve a revocation marker after failed probes or target edits, and block native acquisition until requalification instead of falling back to a mutable name. Preserve immutable-image proof, company and account boundaries, and Legacy acquisition. ## Verification - Reconciled with master `9179d8dcc3e908c217fde4f63c9d08ccf8132eeb` through the prerequisite stack, retaining the merged startup fix and latest Codex Linux ARM64 behavior. - [Four-target exact-source package qualification](https://github.com/paperclipai/paperclip/actions/runs/39267321383) passed on source `04e0202ca81387b17cbe7fd094a8338648356fe9`: all four native builds, public-package assembly, Linux x64 verification and clean installed consumers on Apple Silicon, Intel Mac and Linux ARM64. The later master reconciliation adds shared OpenRouter attribution and changes runtime source. This historical result keeps its original source identity; [later qualification](https://github.com/paperclipai/paperclip/actions/runs/39281100929) passed at `dca62c7aeb4b45f0dd91a8e18d386a16a2658ef8`. It predates the subsequent TypeScript startup fix. - Fresh local product acceptance on integrated source `b2c9fe43f9cd3bc5dd9d22552da0148845ba71a4` completed a useful file and follow-up through native Claude/Opus 5.5, High effort and the API-key connection. Both actual browser downloads were independently checked; the revision preserves the original body and session continuity. Total task estimates: $0.518432800. Ordinary web and API creation saved defaults with the native experiment disabled. - Local focused verification passed 993 startup/session tests, 243 UI tests, 12 workflow security tests, direct server/UI TypeScript checks, and token/palette gates before the last review changes. Initial DB-backed snapshot pin/revocation coverage passed 18 cases; the final serial route suites pass 122 credential/permission and 232 snapshot/environment cases after correcting a test hook timeout. Current-head cloud suites pass. - Preserved the failed pre-provider local fixture and its full pending reservation. The successful fixture has no unpriced or pending usage. Historical failed Cloud journeys, accounting holds, source identities and subscription limitations remain in the dated plan. - All Docker/Rust release production was performed in cloud CI. No local Docker image was built. An inadvertently invoked local Rust prerequisite was stopped. - Current-head cloud CI is green. All three stack PRs have fresh Greptile 5/5 reviews and zero unresolved review threads. Required typecheck, test and build gates ran in cloud CI; Docker work stayed remote. Earlier failed checks remain in their original runs. - The final master merge preserves task-loading, permission, skill-retention and OpenRouter changes. Pi uses a fresh combined profile 27, preserving both historical profile-24 declarations; Copilot remains profile 22. Focused protocol checks passed 155 cases (one skipped), the updated Pi attestation check passed 18 (one skipped), and 91 evaluation/catalog checks passed. - Latest-application manual continuation passed in 37.942 seconds on `695e5c005a85bddc8711d3fcddcaf6b7e1fb64d0`, with High effort, native Opus 5.5, Anthropic API attribution, the same resumed Claude session, an independently checked 635-byte file and persisted Done status. It uses the earlier verified Mac daemon; the preceding-source package qualification passed at `dca62c7aeb4b45f0dd91a8e18d386a16a2658ef8`. That package run predates the small TypeScript startup fix and is not relabeled as qualification for it. - Upgrade limitation: changed compiled sidecar identity rejected old durable launch state and recovery hit session-open bounds before eventually resuming. That attempt was operator-cancelled and retained; the successful manual continuation does not qualify seamless upgrades. - Local latency profile, Opus 5.5/High unchanged: three alternating real-ACP loopback samples per variant reduce median provider-ready time from 5.081s to 4.034s. The matched real API task startup improves from 5.533s to 4.348s, but total reply time changes from 17.933s to 20.221s because agent work varies. This establishes a startup saving of about one second, not a consistent total-reply speedup. A real candidate follow-up passed in 20.146s and resumed the same saved session. The loopback fixture makes no external model requests; failed initial probes remain retained. - The startup change passes 107 focused runtime/effort/lease tests, 53 profile checks (one skipped), TypeScript checking and the TypeScript-only runtime build. Native hire fixture checks pass 70 tests; their first local run retained a socket-hangup failure and stale OpenCode expectation, both accounted for before the passing rerun. Broader required checks run in cloud CI. ## Risks - **Experience needs improvement:** successful connection setup still shows “Connection needs attention” because runtime checks are deferred. Cold provider-pack upload took 122–126 seconds per run while the task mainly showed “Thinking.” The tested Core-only preview excludes private Cloud UI plugins; this is not full Cloud distribution or subscription qualification. Desktop dark theme was tested; mobile and comprehensive accessibility were not. The portable report validates, but gallery interaction could not be inspected because host preview was queued. - The optional supply-chain scan returned neutral/inconclusive because GitHub Actions package coverage and infrastructure parsing are unavailable. It is not counted as a successful supply-chain qualification. Exact package, daemon and image integrity checks passed. - A stale, missing or wrong-architecture pack must fail admission. It must not change runner or target silently. - Provider-pack source changes invalidate affected earlier execution results. Existing unknown-cost and cleanup holds remain intact. - Live subscription execution remains unverified under the API-key qualification direction. Built-in authentication flows are retained. ARM64 cloud-image production is deferred. Merge and production deployment remain separate. ## Model Used OpenAI Codex, GPT-6 family, with reasoning, repository tools, code execution and browser testing. The exact serving model ID and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [ ] Focused local tests and final cloud verification pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-19 14:17:24 -05:00
DottaandPaperclip	3858d2341d	fix(recovery): default saved-monitor waits and keep task recovery quiet (#16686) ... ## Thinking Path > - Paperclip manages AI agents and their work. > - A task must keep a durable path to its next action. > - A provider can save a task monitor, then fail to yield because it omits internal continuation fields. > - An interrupted provider-pack check can then be reported as permanent artifact incompatibility. > - The task asks its user to certify recovered workspace files, even though this is an operator responsibility. > - This pull request derives the saved monitor continuation, bounds verification retries, and removes that task form. > - Normal recovery stays quiet. Unresolved holds retain inspection and the existing safety checks. ## Linked Issues or Issue Description **What happened?** A yielded completion without `continuation` is rejected even after the provider saves an eligible monitor on the task. Repeated attempts cannot finish. Remote verification also treats timeouts and missing exit status as artifact incompatibility. The task recovery notice exposes raw diagnostics and asks the task user to certify infrastructure files. **Expected behavior** Use current persisted task state to fill routine continuation fields. Retry interrupted verification reads within a fixed bound. Keep normal recovery in the working state. Show a compact notice only when work cannot safely continue. **Steps to reproduce** 1. Save an eligible monitor on the active task. 2. Call `paperclip_finish` with `reportedWorkDisposition: "yielded"` and omit `continuation`. 3. Return a timed-out remote provider-pack command with empty stderr during recovery. Inspect the resulting task notice. **Paperclip version or commit** Source baseline: `aaeff418cf` (master integrated with its current task visibility and saved-source reconstruction rules). Related changes: #15824, #16104, #16451, #16493, #16690. This fix complements saved-result recovery and verified pack reuse. It does not replace their workspace ownership checks. ## What Changed - Allow omitted or null continuation at the provider input boundary. Read current authorized task context and fill a monitor continuation only for the bound run and an eligible saved monitor. Keep accepted results strict. Apply this to Codex, OpenCode, both direct and production-sidecar ACPX paths, and external drivers. Reserve the semantic call identity during the saved-context read and reject cancellation or a changed run/turn. - Bind the shared completion change and continuation helper in a new Copilot v21 source declaration. Preserve v20 history and its decoder support. Qualification stays pending. - Expose the eligible continuation in task context. Completion admission still checks persisted monitor state. No schedule is created or renewed by the default. - Retry read-only provider verification at most twice per command. Hold exhausted reads with a distinct verification-unavailable cause. Reattachment cannot renew the read budget through an unchanged provider-attempt counter. Keep completed verification failures and wrong versions incompatible. - Remove the task file-certification form. Hide the notice only for a matching durable recovery path without an unknown-action replay hold. Keep missed retries, unsafe outcomes, and unresolved file holds visible. - Add production-component stories for automatic recovery, blocked and expired holds, reader access, persisted repair decisions, source reconstruction, queued continuation, and mobile. Preserve master’s guarded saved-source reconstruction choice after confirmed source destruction. Update the execution contract and access maps. ## Verification - Completion, helper, Codex, OpenCode, ACPX, and profile regressions pass. After the sidecar review fix, 271 tests across the production sidecar and three provider suites pass, plus 72 helper/profile tests. The real sidecar MCP bridge tests cover saved-monitor acceptance, no-monitor refusal, cancellation, duplicate call identity, and raw-versus-forwarded semantic receipt hashes. The OpenCode tests also cover eligible-monitor acceptance and refusal without one. - The fresh full native executor suite passes all 743 tests. Four profile, installation-integrity, and ACPX driver suites pass all 168 tests. The earlier CI fingerprint failure required a new immutable source declaration; its follow-up Docker failure required the matching context allowlist entry. Both fixes are verified locally. Targeted server monitor, tool authority, and provider verification suites pass. The probe tests include a real timed-out subprocess, an unrelated responsive timer, transport errors, and completed integrity rejections. - All 90 tests in the merged task notice, reconstruction choice, recovery display, and lineage suites pass. They cover reader access, live/missed/mismatched recovery, unknown outcomes, saved messages, retry refusal, and removal of the file form. Both review findings have failing-baseline/passing-treatment regressions: identical polling across retry expiry, and a failed refresh after cached running activity. - Browser walkthrough passed for automatic recovery, unresolved details, a 390px mobile story, and the merged saved-source reconstruction and queued states. The reconstruction control starts disabled and normal automatic recovery shows only Working. The stories use production components and fixture API data. They do not prove live cloud recovery. - Token gates, map checks, and Storybook catalog generation pass. The exact Docker context integrity command passes locally after adding the new build declaration to its allowlist. - Workspace typecheck and build pass on the final source, including the versioned identity update. The final server and UI guards pass their focused tests, typechecks, builds, and token gates. The final standalone Storybook builds. The saved-monitor default retains master’s stricter child-task visibility filter. Re-review caught an additional production-sidecar validator before forwarding; the fix now defaults at that boundary and has passing regression controls. After preserving master’s new reconstruction capability, 68 targeted reconstruction, tool-authority, and provider-verification server tests pass. The current-master integration at `2a80050a0d` has a fresh 5/5 review with zero unresolved threads. Its complete CI matrix, including Runner tests, is the merge acceptance record. - On the final master integration, local typecheck, build, and all 90 recovery UI tests pass. A concurrent runner run hit five 5-second sidecar startup timeouts; an isolated sidecar run passed 86 tests and timed out in the unrelated unsupported-bootstrap case. Those local deadline failures remain recorded; the canonical CI Runner lanes use their normal deadlines and pass. The unsharded local full-suite attempt did not complete. It spanned source edits; the fresh native executor run above passes. An unrelated workspace fixture timed out once and then failed to reserve 32 contiguous ports on this host. Its unchanged-base control and CI server suite pass. Full-suite acceptance uses the fresh latest-head CI matrix; this PR does not claim a passing unsharded local run. ## Risks The default applies only to an eligible persisted monitor. An explicit invalid continuation still fails validation. The added read occurs only when a yielded report omits its continuation. Admission rechecks current state after that read. An interrupted verification command can add one extra 30-second probe. Completed rejections stay closed. These probes do not change the pack, launch provider work, or replay external tools. Two inconclusive reads hold the original run. They do not schedule another reattachment with an unchanged provider-attempt counter. This PR’s pending Copilot v21 declaration binds the changed shared contract, resolver, direct driver, and production sidecar sources. The previous v20 declaration is immutable and remains decodable, but launch requires the new exact identity. Qualification remains pending. Task users lose the file-certification form. Board-authorized source-only repair remains available through the resolution API with the original evidence and stop-receipt requirements. This branch does not deploy or recover historical held runs. > This is a bug fix and UI polish within existing recovery behavior. ROADMAP.md was checked. ## Model Used OpenAI Codex, `gpt-6.1-sol`, xhigh reasoning, with tool use and code execution. The host does not expose the context-window limit. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass (changed-area suites; the full local run limitation is recorded above) - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-18 21:43:15 -05:00
DottaandPaperclip	cccde7122b	Trace execution preparation and durable response persistence (#16419) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The server prepares an execution environment before it starts an agent. > - Operators need to distinguish preparation, provider wait, and response persistence. > - Existing preparation phases start separate traces, and the native session trace ends before the final response is saved. > - This pull request adds an execution-attempt trace and detailed spans at the existing work boundaries. > - The benefit is a measurable startup and settlement path without changing execution policy. ## Linked Issues or Issue Description **What existing behavior does this improve?** Operator-configured OpenTelemetry tracing for agent preparation, startup, and durable response storage. **Subsystem affected** Server orchestration, native Runner startup, and the Honeycomb run link. **Current behavior** Preparation phases start independent roots. Workspace lock waits, authorization groups, runtime asset work, provider-pack fallback, and the gap after provider completion are hard to attribute. **Proposed behavior** Use a server-owned async context for each execution attempt. Parent nested work to that attempt. Link the separately sampled native session because its ingress and queue history can begin earlier. Record transaction entry, lock waits, grouped authorization, asset preparation, artifact fallback, copyback, and response commit. **Reason and benefit** Operators can identify expensive work from recorded boundaries instead of inferring the cause from elapsed time. Nested and concurrent durations remain visible and must not be added together. **Breaking changes** No API or execution-policy change. New Observability span names and closed count attributes are documented. The existing local run-performance schema also records the additional provider-pack and harness measurements. Refs: #16178, #16205, #16330. ## What Changed - Add `task.execution_attempt` with same-run async ownership, independent root sampling, and native-session links. - Measure workspace transaction entry and settlement, advisory and row waits, source scans, reader groups, notifications, and writes. - Measure runtime selection and each concurrent instructions, skills, and MCP branch. Separate manifest, cache, materialization, and verification work. - Measure provider-pack discovery, verified reuse or upload, final verification, and remote harness state checks. - Measure workspace settlement, accounting, liveness, response authorization, comment commit, and publication enqueue. - Preserve the silent endpoint-off path, including when another library has registered a tracer. Bound repeated detail spans to 16 per name per attempt. - Extend the Honeycomb run link and document the actual coverage and remaining gaps. ## Verification - After resolving the conflict with retained-reader batching on `b98cdaea531c8447637cd4dcc19c61b3f5f41844`, all 61 targeted query, authorization, workspace-preparation and trace-boundary tests passed. The server typecheck passed. Reader tests still bound query count, avoid loading retained run payloads and enforce fresh project grants on every publication attempt. - Before that base integration, the tracing/exporter group passed 855 tests with 2 optional-SDK skips across 10 files and no inherited OTLP endpoint. It covers real PostgreSQL waits/rollback, durable response commit, assembled heartbeat preparation, concurrent parentage, sampling and tracer failure isolation. Native workspace/history tests passed 23 cases. These results remain supporting evidence for the unchanged tracing paths. - Full workspace typecheck and build passed during implementation. Full sharded CI, release validation, E2E and Apex 5/5 passed on prior head `8cebad80f3856dbcff6f3a6d5d34880ff77a20f2`. Fresh CI, security and Apex review are required on the current head before merge. - `pnpm check:token-gates` passed. No styles changed. - Earlier CI runs exposed exact-source-expression assertions changed by wrappers, missing run hashes on transaction-boundary spans, and sampling fixtures without an enabled endpoint. The fixes preserve the calls, add the declared hash and span cap, and enable tracing explicitly in the sampling fixtures. Focused repairs passed; the full prior-head CI passed after those repairs. Earlier failed run: https://github.com/paperclipai/paperclip/actions/runs/38729131366. - The full local `pnpm test:run` was stopped after the base advanced during that process. Its mixed-version results are not final-head evidence. A full local-suite pass is not claimed. - The old-head Superagent scan stalled at 35%. The current head has a fresh scan; no security pass is inferred from the old pending result. - No deployed Honeycomb acceptance is claimed by this code change. ## Risks - Enabled tracing creates more spans. Repeated detail spans are bounded, and inventories use group spans. - The attempt and native session remain linked traces. Historical queue time can precede the attempt, and nested intervals overlap. - A committed comment proves durable server storage. Publication enqueue and realtime dispatch do not prove external delivery or browser paint. - New custom attributes use only the existing run hash and validated file/byte counts. No SQL, paths, permissions, content, or exception text is added. ## Model Used OpenAI GPT-6 through Codex. The serving model ID and context window size are not exposed in this session. The agent used reasoning, tools, code editing, and code execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-15 08:13:53 -05:00
DottaandPaperclip	422287eecd	fix: preserve runner recovery, warm sessions, and task outcomes (#13338) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The native runner connects task messages, provider execution, and task outcomes. > - First-time user tests exposed gaps in recovery, completion permissions, message delivery, and Stop behavior. > - These gaps left usable output hidden, completed work waiting for bookkeeping, or safe work unable to continue. > - This pull request fixes the shared lifecycle and receipt paths while preserving process ownership and action checks. > - Users can continue work with accurate task state and durable messages. ## Linked Issues or Issue Description **What happened?** A stopped local Codex execution could remain blocked even after its processes had stopped and its complete transcript proved that no external action needed replay. Claude under Conservative permissions could fail to call task completion tools. Recovery could reuse an assistant item ID and overwrite prior output. A delivered comment could remain marked uncertain after navigation. Stop could look like Pause or a new recovery incident. Workspace contention could look like cancellation. A direct reply reopening Done could enter a clarification loop. **Expected behavior** Recover automatically only with verified termination and complete action receipts. Preserve answers and messages. Keep task completion available under Conservative permissions without broad tool access. Show crashes as Blocked, actual human decisions as In Review, and ordinary workspace contention as waiting. Stop the current response and allow a new direction. **Steps to reproduce** 1. Create ordinary response tasks with local Codex and Claude Code, then send follow-up messages through the task composer. 2. Interrupt a disposable local Codex runner during text-only work. Verify automatic continuation and retained output. 3. Stop a response, send a new request, answer a clarification, and reopen completed work with another message. 4. Navigate or reload while a comment submission is pending. Confirm the exact persisted request receipt settles it without removing newer draft text. 5. Run two tasks in a shared Daytona workspace. Confirm waiting does not appear as failure. **Paperclip version or commit** Initial acceptance baseline: `c9021c6721f91e2c74bd9fee9d3fd41c999d17b7`. Current integration base: `6cef9743c`. Both operator-interruption and workspace-waiting guards are preserved; native restart and legacy permission rules remain documented. **Deployment mode** An isolated source-built test-drive instance, with real local Codex and Claude Code providers and disposable Daytona environments. Related work: #13314, #13316, #13327, #13344, #13239, #13254, #13163. This PR addresses additional failures from ordinary task journeys, including controller restart handoff and repeated warm sandbox setup. Historical task status reconciliation is excluded. ## What Changed - Persist runner ownership immediately at spawn and resume an explicitly adopted runner even when the controller crashed before the first driver checkpoint. Detach the controller safely across graceful restarts, including session startup. Prevent an old finalizer from suspending or signaling an adopted runner. Checkpoint idle warm sessions before shutdown. Preserve the same run and queued follow-up messages. - Scope saved legacy queue successor checks to the queue owner while preserving ordinary task locks, operator identity, assignment gates, and exactly-once delivery. - Preserve managed Codex credential files when an old session is detached for restart; normal owned cleanup still copies refreshed auth back and removes the scoped copy. - Reuse the bound warm shared sandbox and fully verify an existing staged provider pack before using it. This avoids repeated uploads when the pack is already valid. - Add a narrow local Codex replacement path with stopped-process proof, a closed transcript inventory, exact completion receipts, and fresh-session lineage. Preserve no-replay holds when evidence is incomplete. Recovery may clear only the same run's recorded Blocked status version; manual re-blocking and dependency changes invalidate that receipt, while queued comments do not. Later blocks stop scheduled, queued, and final dispatch; queued/final checks re-read dependencies even when the task status stays In Progress. - Permit only task delivery and human-input tools through the isolated Claude runner's exact task bridge. - Scope assistant item identity to the provider turn and ignore only authority-free Codex skill-change notifications during startup. - Reconcile composer submissions by client request ID across response loss, navigation, and reload. Retain text typed during delivery. - Keep acknowledged run-only Stop neutral and show workspace contention as waiting. Project exhausted native failures as Blocked. - Restore the guarded task-page retry action for failed legacy runs, including the server-supported explicit new-attempt path for stopped conversation adapters. Preserve native/process recovery holds and avoid promising Retry while a decision or execution gate hides it. - Refresh delivered artifacts and handle direct user replies that reopen completed work without a clarification loop. - Check the embedded PostgreSQL PID, data directory, and actual port before connecting or migrating. - Document accepted behavior and add focused regressions at lifecycle, route, transcript, and UI boundaries. ## Verification - Final head `fece606ac2` passes the complete GitHub CI matrix: **34 green checks, two expected Storybook skips, no failures or pending checks**, including `ci / verify`, `ci / e2e`, full runner verification, typecheck, build, every server/workspace shard, and all browser shards. [CI run](https://github.com/paperclipai/paperclip/actions/runs/34727183287). Greptile is **5/5 with no open findings**. The final two commits only refine test fixtures; both affected suites pass 24/24 locally and in CI, with server typecheck green. - Complete local Vitest coverage uses the canonical groups/shards: all 635 general server suites, all 145 serialized suites, and all workspace packages. The aggregate began on `0a8001c18` while the final queue fix arrived: 23,903 passed, five failed, 87 skipped. The five port/socket/timing failures passed unchanged in follow-ups (60 tests in the exposure/file suites and 412 tests covering the serialized failures and unrun tails). The final queue/operator-identity suites separately passed 52/52. This is aggregate coverage plus explicit reruns, not a pristine single-command final-head run. - After integration with current master, queue/operator-identity/continuation suites passed 162/162 and affected UI suites passed 140/140. ACP Stop/continuation and legacy task/Inbox/message browser suites passed 9/9, including both task recovery Retry and thread Try again, automatic saved-message delivery, exactly one new run, Done, and retained output after reload. The default process Stop/Pause/Resume browser case passed (the native-provider case is opt-in and skipped by default). The complete Board attachment/receipt browser suite passed 11/11 on a disposable instance, covering both composers, exact receipts after lost responses, no replay, bound attachments, and newer drafts after reload. - Blocking-intent regressions cover pre-existing Blocked, a mismatched run/cause, an explicit manual re-block, changed dependencies, a queued comment after failure, and a block arriving between scheduling and provider dispatch. The negative cases reproduced before the fix. All 478 affected executor/recovery/dispatch tests passed; both database suites ran separately after availability-probe skips in the first combined command. The final late-dependency check passed all 143 affected recovery/dispatch tests (zero skips) after two new negative cases reproduced the bug. - Focused runtime regressions cover awaited runner ownership publication, authenticated adoption before the first checkpoint, old-finalizer detachment, idle and busy warm-session shutdown, rejected checkpoint propagation, provider-pack verification, and managed-Codex credential preservation. Four managed credential detachment cases reproduced the bug before the fix; normal owned cleanup still succeeds exactly once. - Live local Claude: SIGKILL 2.6 seconds into startup recovered the same run automatically in 53 seconds, then a normal follow-up completed in 24 seconds. SIGTERM 2.5 seconds into startup preserved the same run (54 seconds) and its queued follow-up (21 seconds). Answers remained visible and the task reached Done. - Live Claude Daytona: a warm follow-up retained its sandbox and fell from 121 seconds to 44 seconds. A separate cold turn took 127 seconds; after controller shutdown and checkpointing, its follow-up completed in 33 seconds with the same sandbox, workspace, native session, and runner. Both answers remained visible and the task was Done. - Other live journeys covered task completion and follow-up with local and Daytona Codex, local Codex crash recovery, Stop then new direction, clarification response, live artifact refresh, and shared-workspace waiting. - Validation limits: the opt-in native composer Stop/Pause→subtree Resume fixture exposes terminal/result ordering and subtree-cancellation attribution bugs that can leave a child task blocked; that new finding is assigned to a separate follow-up and is not claimed fixed here. Default CI skips this optional native-provider fixture. Managed-Codex credential handoff and the queue-agent integration use automated regression evidence. Cold custom provider-pack uploads still add startup latency. ## Risks - Automatic replacement remains deliberately narrow: local Codex, verified stopped identities, unchanged retained state, and a complete text/completion-only turn. Unknown actions, partial history, or changed ownership remain blocked. - Claude completion permission handling changes an upstream package patch. The exact isolated task bridge must remain pinned; unrelated tools keep their existing permissions. - New task failure projection changes user-visible status. No historical status backfill or database migration is included. - This is a broad lifecycle fix across server and UI. Live proof covers graceful local Claude restart during startup and idle Claude Daytona session recovery across controller shutdown. Live abrupt SIGKILL during local Claude startup also recovered the same run. Unknown ownership or missing action evidence still blocks reuse. Cold custom provider-pack uploads still add startup latency; this change avoids unnecessary repeat uploads. ## Model Used OpenAI GPT-6 (Codex), with reasoning, code execution, browser automation, and tool use. The exact hosted model ID and context window are not exposed in this task. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-12 19:41:15 -05:00