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Commits
| Author | SHA1 | Message | Date | |
|---|---|---|---|---|
 DottaandPaperclip
|
505e1a5582 |
feat(cases): add persistent workflows with same-task agent handoffs (#16959)
## Thinking Path > - Paperclip manages AI agents and their work. > - An agent workflow needs persistent facts and a safe way to transfer work. > - Creating a task for each phase splits the objective, discussion, workspace, and review policy. > - A case can retain the facts while one primary task moves between agents. > - Transfers must survive process failure and preserve private access, budgets, and completion gates. > - This pull request adds durable case handoffs, native case tools, and read-only case pages. > - Prompts describe the workflow. Existing task controls decide when work can run and finish. ## Linked Issues or Issue Description **Problem or motivation** Prompt-driven agent teams need a persistent record that can move through triage, implementation, verification, and correction. Ordinary reassignment does not provide a durable instruction, safe release barrier, or recoverable delivery receipt for an agent handing off its own running task. **Proposed solution** Extend standalone cases with one primary task, a descriptive phase, retained access sources, and a handoff ledger. Apply assignments after source execution and workspace settlement. Deliver each transfer through the existing durable wake queue. Provide `create_case`, `read_case`, `update_case`, and `handoff_case` in the native runner. Creation requires kickoff and explicit workflow text. An explicit handoff to `done` closes the case when normal task completion is accepted. **Alternatives considered** Do not add a workflow engine, filesystem queue, configured state graph, or one task per phase. The workflow document combines transition prose with an optional Mermaid `stateDiagram-v2` map. The server does not execute the diagram. The Pipelines experiment removed on master stays removed. **Roadmap alignment** This extends Agent Reviews and Approvals, Enforced Outcomes, Bounded Run Recovery, and Activity Log attribution. Existing approval, review, budget, privacy, workspace, and responsible-user rules remain authoritative. Related work: [ordinary handoff wake recovery](https://github.com/paperclipai/paperclip/pull/15019). This feature adds a separate persisted case-handoff receipt and release barrier. ## What Changed - Add case routing fields, retained access sources, durable handoff history, delivery leases, and replay-safe migrations. - Keep the same primary task across agent phases. Preserve each returning agent's own session and the task's workspace. - Fence outgoing mutations, wait for provider and workspace release, and recover delivery without duplicate task comments or runs. Recheck current assignment permissions as the original caller before applying a delayed transfer. Scope a run Stop to that run’s own handoff intents, so repeated old Stop requests preserve newer work. Cancelling terminal intent without a source run also requires fenced current task ownership, including native retries and preparation with an old checkout. For Cloud callers, revalidate current stack membership with an uncached Cloud RPC and derive owner elevation from the current managed setting. - Keep case reads, documents, assets, Audit, and live events inside retained task/project permissions. - Add native case creation/read/update/handoff tools. Store required workflow text and initial documents on the first task. Page oversized case facts and referenced document bodies through the dedicated tool with bounded UTF-8 JSON, current routing versions, snapshot conflicts, and current source authorization on every page. - Add read-only case lists and detail pages, task-style list controls, compact dotted field tables, linked handoff tasks, and case filters in Audit. - Add native/legacy integration tests, migration/restart tests, browser coverage, and bounded live receipt fixtures. Extend the trusted sandbox condition to cover the new subscription fixture profile. - Hide obsolete paused-agent warnings on completed or cancelled task threads. - Synchronize the company-switch settings test with React effects after a CI failure. Preserve its security assertions and production remount behavior. ## Verification The branch directly includes master `9ef434fe79`. The required `ci / verify` and `ci / e2e` gates pass on head `765fccd67c`. [Current-head CI](https://github.com/paperclipai/paperclip/actions/runs/39464348614) passes typecheck, build, tests, and all eight browser shards. Security checks pass. [Greptile gives this exact head 5/5](https://github.com/paperclipai/paperclip/pull/16959#issuecomment-6291156549), with no unresolved review threads. The optional Paperclip Review check remains queued because its assigned agent is paused. It is not a required branch check. No check result was overridden. Local workspace typecheck and build pass after the master merge, along with database migration checks, token gates, map checks, Storybook catalog checks, and the Copilot profile identity check. Standard builds refresh Runner vendor output. Focused checks pass 2,008 API/paging/context tests and 7 strict case protocol tests. The final commit changes one test fixture only; its ten tests, UI typecheck, and token gates pass. No production source changed in that commit. On current head `765fccd67c`, all **194 critical workflow tests** executed and passed with no skipped tests in those files: - 38 Stop/ownership tests, including board completion intent, native retries, stale Stop, and preparation with an old checkout. - 2 actual legacy process/HTTP handoff tests, including scratch failure, a closed-stdio child that continues writing, and recovery through a fresh worker after the process group stops. - 5 migration tests, including SQL column metadata, preserved null authority context, and all six prior-numbering receipts. - 3 process-settlement and 5 scratch tests. - 88 handoff-service, 18 heartbeat handoff, and 21 native case-tool integration tests. - 7 bounded case/document-read projection tests and 7 strict protocol-contract tests. The current CI checkout was `fed65d49`, merging `765fccd67c` into master `9ef434fe79`. Its new document regressions reconstruct exact Unicode/escaped bodies and revisions through real native authority and authenticated HTTP with generic API tools disabled. They cover case-owned, primary-task, and linked-task documents; routing on every page; stale document snapshots; access loss and unlinking; unrelated/foreign/private sources; system documents; and quarantined content. Active-task document tools retain their existing behavior. These are current-head test results from the first CI attempt; the browser-only retry did not rerun these suites. The full `64fdd3403f` CI failed one separate settings test: after a company switch, it observed an unsettled API-key draft. The production component and test were unchanged from prior green source. Production switches remount both keyed settings layers; the test directly reused an unkeyed view and used a timer tick instead of waiting for React effects. The final commit replaces that fixture synchronization with React `act`. The exact secret-clearing assertions and all timeouts remain unchanged. The original assertion failure remains recorded; no unchanged retry was used. The narrow unchanged baseline and fixed fixture each pass 10 tests. The upstream result-paging merge preserves case capture namespaces and current asset privacy. Its API integration suite executed 39 of 41 tests successfully, with two skipped; the optional assigned-result PRP integration test was skipped. Neither skipped suite is counted in the 194 critical tests or as live provider proof. All 361 upstream migration entries and SQL bodies remain unchanged. Six case migrations follow master as 0363–0368 with identical SQL hashes. Official Drizzle generators produced the combined metadata and five retained snapshots. Generation reports no schema changes, and the snapshot drift test passes. The earlier `ce361ae5d0` CI passed on attempt 1, including its then-current 179 critical tests. Fresh review later identified unusable document references with generic API tools disabled; the bounded document reads and ten additional authenticated HTTP tests address that finding. The full local `pnpm test:run` attempt was cancelled after this Mac exhausted PostgreSQL semaphore capacity; it is **not** counted as a pass. Later database attempts also stopped before assertions or skipped, including one sandbox socket denial. Two original stale-Stop regressions did reproduce the bug against the old source. A REST serialization assertion passed after two preserved database-startup failures. No test timeout was increased. All 194 assertions listed above executed and passed in current-head CI. The complete 385-file, 3,963-test UI shard also passed after the fixture repair. A configured-provider receipt workflow passed 13 backend checks across triage → implementation → verification → correction → done, using one task and four work runs. The saved receipt is revision 2 with total 6 USD; case and task both closed. The original canonical attempt remains failed because its browser assertion confused the terminal destination with completed-task tooltips. The corrected full browser verifier passed on the same retained database and original runs, with no additional provider calls. The last clean-build browser readback is on `6a86c54a53`; later changes affect recovery, authorization, bounded reads, and settlement. Accounted work cost is a $1.010574 rate-card estimate; provider billing and setup-probe usage are unavailable. Copilot profile 49 passed the unchanged seven-fixture private protocol pack (46/46 checks, no retries) and the product file-edit canary after master's completion-replay change. All 60 bound implementation hashes remain unchanged on the current source. Historical profile-47/48 identities and results remain intact. See the [profile-49 compatibility record](https://github.com/paperclipai/paperclip/blob/codex/persistent-case-handoffs/doc/plans/2026-10-20-copilot-completion-recovery-compatibility-v49.json). This is bounded compatibility evidence, not a fresh full matrix, installed-package product test, or Daytona rollout. Preserved CI failures and retries: - On `20662930ac`, Slack managed setup failed a five-second success assertion after reload. Its test/application path was unchanged from a prior green head. One unchanged-source retry passed all 25 tests in that shard; no source or timeout changed. - On `9402b4f17a`, two CI workers received shutdown signals at 15:24:19 UTC. Neither log had an assertion failure before interruption. One unchanged-source retry of each passed all Runner static checks and all 32 tests in browser shard 6; both aggregates passed. The next head, `7b4374edaf`, passed all CI without retries. - On `295f289b5a`, serialized shard 9 timed out during its first device-login test, then the next test found an active login lease. Direct login/test paths were unchanged from a prior green head. Cold import plus a timed-out async body using the next test's mutable actor/store is the supported fixture-race explanation; no request trace proves that sequence. The original failure remains recorded. One unchanged-source retry passed all 294 tests in 19 files, including all 41 device-login tests. No login source or timeout changed. The subsequent `ce361ae5d0` CI passed without retries. - On `64fdd3403f`, one company-switch settings assertion observed an unsettled draft. The final test-only commit uses React `act` without changing assertions, timeouts, or production code. On `765fccd67c`, all ten settings tests and the complete 385-file, 3,963-test UI shard passed. - On `765fccd67c`, browser shard 3 completed the split-handoff assertions, then cleanup received HTTP 500 from run cancellation after a one-second PostgreSQL row-lock timeout. The extra chat run was reporting completed work while teardown began. Cleanup stopped before restoring a global experiment flag, causing a later assertion to fail. Relevant production and test paths are unchanged from an earlier green commit. Stop's lock order is consistent, and no nested self-lock was found; the exact PostgreSQL blocker was not recorded. One unchanged-shard retry passed. The original failure, trace, and downstream flag failure remain recorded. No Stop implementation, cleanup assertion, or timeout changed. The retry supports intermittent cleanup contention; it does not identify the original blocking transaction. ## Risks - Local process transfers require host-owned PID/group absence. Missing or uncertain termination evidence keeps delivery pending, independently of scratch setup. - Handoff admission and task cancellation share execution ownership. New regression tests cover temporary holds, late source writes, and uncertain provider termination. - Retained private sources use an intersection of existing permissions. This intentionally fails closed when a source is missing or an existing task cannot preserve that boundary. - Migrations add tables and indexes. They preserve master history and can replay over prior feature installs. Migration 0368 adds nullable internal authorization provenance with no default or authority backfill. Historical transfers still awaiting release without this context fail closed; an operator must cancel them and request a new handoff. - Delayed Cloud handoffs depend on the current Cloud membership RPC. An unavailable, ambiguous, expired, or mismatched response holds the handoff for retry; it does not reuse cached authority or grant access. - Bounded reads reload and reauthorize the selected projection per page. Underlying work grows with the data size and number of pages. Changed data or routing requires restarting from offset zero without the old snapshot. - Phase names and workflow diagrams remain advisory. They do not satisfy review or approval gates. - This is a large, cross-cutting PR. The maintainer requested one PR for the whole feature; the commits separate data, runtime, UI, and qualification work. ## Model Used OpenAI Codex, GPT-6 family, with tool use, code execution, and delegated code review. The exact deployment model ID and context-window size were not exposed in the session. Live fixture agents used the explicitly configured provider model recorded in their test evidence. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
|
2c96f76780 |
feat(connections): add model-backed prompt injection prevention
Add opt-in OpenRouter checks at existing tool-result boundaries with regex fallback, service accounting, and settings on Connections. Make migration 0362 safe to replay over existing or partially applied schema state. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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Devin FoleyandPaperclip
|
24758b9da1 |
Avoid loading tool schemas for effective assignments (#16969)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Tool profiles define which tools an agent can use. > - Run preparation and connection checks resolve these assignments from the database. > - These callers need tool IDs and names, but the existing lookup also reads complete schemas and provider metadata. > - Repeated lookups transfer data that these callers discard. > - This pull request adds a small assignment projection through the same permission resolver. > - The benefit is less database transfer and JSON work with current permission checks and the same public response. ## Linked Issues or Issue Description **What existing behavior does this improve?** Effective tool assignment reads during run preparation, native runtime setup, and connection policy checks. **Subsystem affected** server/ — tool access and orchestration services. **Current behavior** Internal callers use the public effective-profile lookup. Its catalog query reads complete tool rows, including input schemas, output schemas, annotations, and provider metadata. These callers only use catalog IDs and names. **Proposed behavior** Internal callers use an assignment lookup that selects catalog identity and selector fields. Both lookups share one resolver. The public effective-profile endpoint keeps its complete definitions. **Reason and benefit** Large catalogs increase database transfer and JSON work for every assignment lookup. The smaller query avoids that payload without caching permissions or changing query frequency. **Breaking changes** None. No route, schema, migration, permission rule, or public response changes. Related: Refs #16761, Refs #16723. The former narrows profile summary reads. The latter changes how the gateway presents tool definitions. Neither narrows this internal effective-assignment lookup. ## What Changed - Share effective-profile resolution between full definitions and assignment records. - Select the existing catalog identity and selector projection for internal assignments. - Use the assignment lookup in run preparation, native runtime setup, and connection policy checks. - Add real PostgreSQL tests for selectors, exclusions, current profile and binding state, company boundaries, and returned payload size. - Document the database read contract. ## Verification - Five focused test files passed: 521 tests. They cover tool access, connection intents, runtime preparation, native runtime context, and the new assignment lookup. - `pnpm -r typecheck` passed. - `pnpm check:module-boundaries` passed. - The PostgreSQL fixture compares the full authorization result with the assignment result. It checks all selector types, excludes removed tools, and observes catalog, profile, and binding changes on later calls. - The payload test measures rows returned by PostgreSQL before application mapping. With large schema and annotation fields, the assignment result is less than 1% of the full catalog payload. This is a synthetic fixture result, not a fleet savings estimate. - `pnpm build` passed. - The full local suite is in progress. It found two Git fixture failures that also reproduce on unchanged master with `init.defaultBranch=main`. Both pass with a process-only `init.defaultBranch=master` setting. The global Git configuration was not changed. This earlier failure remains recorded; it is not counted as a clean first pass. - Apex review: 5/5, no actionable comments. All 54 CI checks passed; two conditional jobs were skipped. - The broader local run also reached two UI test timeouts and one adapter test timeout. All three passed when rerun in isolation with unchanged source. The exact cause of these timeouts is not established. No UI or adapter implementation is changed by this PR. The CLI import/export journey passes its assertions but its local teardown fails with `ENOTEMPTY` while a runtime context asset is written. Its CI check passed. The complete local suite is not reported as a clean pass. ## Risks - Both lookups share permission resolution. Existing tool access tests and result parity checks cover that extraction. - Future assignment callers must use the fields in the smaller result. Typechecking rejects attempts to read full schemas from it. - The lookup still scans the active company catalog and resolves current connections on every call. This change reduces returned bytes; it does not reduce query count or introduce a cache. - No database migration or operational configuration change is required. ## Model Used - OpenAI GPT-6 through Codex, with tool-assisted source inspection, implementation, and test execution. The exact model variant and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Devin FoleyandPaperclip
|
ba3bdd0675 |
Keep Muse maintenance idle on unclaimed warm instances (#16974)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Cloud keeps unclaimed applications warm so new users can enter quickly. > - Empty warm applications use an existing standby predicate to skip recurring database work. > - Muse maintenance starts without that predicate and scans its tables every five seconds. > - These scans keep an empty database active even when no Muse binding exists. > - This pull request applies the existing standby predicate to Muse startup and recurring maintenance. > - The benefit is idle database compute while the application stays warm, with normal maintenance after claim. ## Linked Issues or Issue Description **What happened?** `createApp` starts Muse maintenance without the warm standby guard used by other background services. The worker updates qualification evidence at startup and reads binding tables every five seconds, including on an empty unclaimed instance. **Expected behavior** An unclaimed warm application must not run recurring database work. Muse maintenance must resume after the signed claim, without a process restart. **Steps to reproduce** 1. Start the maintenance service with background work disabled. 2. Advance the timer beyond several five-second sweeps. 3. Observe database calls from the original implementation despite the disabled state. The new regression test uses real PostgreSQL. The original source fails its zero-query assertion; the patched source passes. **Paperclip version or commit** Reproduced on `813e808af46` before this fix. Related: Refs #16448. ## What Changed - Pass the Cloud standby predicate to Muse maintenance. - Admit both the startup evidence update and recurring sweeps only when background work is enabled. - Mark startup evidence once, before reconciliation. Retry that write after a database failure. - Add PostgreSQL tests for standby, claim, later ticks, default deadline enforcement, and startup-write failure. - Document the maintenance boundary. ## Verification - Five focused test files passed: 278 tests. They cover Muse maintenance, Muse control and qualification routes, and Cloud standby behavior. - Controlled regression: the new standby test fails against the original maintenance source. The patched source was restored after the comparison. - The new PostgreSQL test advances ten minutes while admission is closed and observes zero database operations. It opens admission and verifies the persisted qualification evidence update and reconciliation. Later sweeps retain a single successful startup update. - `pnpm check:module-boundaries` passed. - `pnpm -r typecheck` passed. - `pnpm build` passed. - All 54 CI checks passed; two conditional jobs were skipped. - Apex review: 5/5, no actionable comments or unresolved threads. - The full local test command is still running. The focused tests, workspace typecheck, build, and complete CI matrix above are the finished checks. ## Risks - Claimed workspaces retain existing Muse maintenance. The app gate depends only on warm standby. It does not suppress deadline enforcement or terminal cleanup during idle task drain. - Work resumes on the next five-second maintenance tick after claim. Request-driven work remains available through the existing claim path. - The receiver keeps its existing lifecycle. Its empty pending-contact map causes no database writes in standby. - No database migration, provider configuration, or authority rule changes. - Broker and receiver effects are mocked in the new maintenance tests. The database operations are real. Existing Muse control tests cover the broker boundary; no live Muse provider qualification is claimed. ## Model Used - OpenAI GPT-6 through Codex, with tool-assisted source inspection, implementation, and test execution. The exact model variant and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
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813e808af4 |
Remove filesystem history authorization from workspace preparation (#16963)
Remove physical-root source/reader authorization and sticky directory classifications from workspace preparation. Preserve current task/run authority, app-record privacy, credential authorization, containment, and lifecycle/publication integrity.
Validate replacement selections against persisted new inputs and refresh verified checkout ownership so bounded reuse survives earlier workspace relocation. Add real PostgreSQL/Git regressions, a reproducible history-scaling benchmark, and documentation.
Full CI passed all 48 jobs and Greptile scored 5/5 at
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DottaandPaperclip
|
96824a71d1 |
fix(db): migrate connector hooks on SQL_ASCII databases (#16958)
## Thinking Path > - Paperclip manages work for AI agents. > - Server startup applies database migrations before accepting work. > - Some older embedded databases use SQL_ASCII encoding. > - Migration 0355 uses a Unicode escape literal that PostgreSQL rejects on those databases. > - A source rebuild can pass but the updated server cannot start. > - This change makes that migration portable and preserves its shipped receipt. > - Existing databases retain their newer connector triggers during upgrades. ## Linked Issues or Issue Description **What happened?** A source deployment failed at startup with `conversion between UTF8 and SQL_ASCII is not supported`. Migration 0355 could not compile its connector policy function on an older embedded database. The previous app was restored while this repair was prepared. **Expected behavior** Supported legacy databases complete startup migrations. Connector selector trimming matches JavaScript `trim()`. A database that already applied 0355 must not replay it over the later 0356 connector trigger definition. **Steps to reproduce** Create a PostgreSQL database from template0 with SQL_ASCII encoding, then apply the current migration chain. The new regression fails with the observed conversion error before this change. **Paperclip version or commit** Reproduced on `92b238137ba716cdf1746dd49969e2f5ab7af8fe`. The branch includes current master `f57ed25385`. **Database mode** Embedded PostgreSQL 18.1; legacy SQL_ASCII database. The UTF-8 path is also covered. Related background: #645 fixed encoding for new databases. Existing SQL_ASCII installations still need portable migrations. #16956 fixes a separate workspace lock timeout that motivated this deployment. ## What Changed - Build the whitespace pattern from UTF-8 bytes instead of a Unicode escape literal. - Match whole whitespace sequences so SQL_ASCII does not trim partial multibyte characters. - Recognize the original 0355 checksum as a valid receipt. This prevents replay of its older trigger body over 0356. - Add real PostgreSQL coverage for both encodings, selector behavior, and preservation of the later trigger definition and receipt count. - Document the legacy encoding and migration-history contract. ## Verification - Red: SQL_ASCII migration failed with the same conversion error; UTF-8 passed. - Second red: fixing only the SQL caused an existing receipt to replay and overwrite the later connector function. - Green: 29 focused tests passed across the new regression, migration replay tests, and database client tests. - Rebased regression: all 29 focused tests passed. - `pnpm -r typecheck`, `pnpm build`, and `pnpm --filter @paperclipai/db check:migrations` passed. - Linux ARM64: clean build and 37 focused tests passed, including both encoding and workspace-lock regressions. - Live acceptance: the same legacy SQL_ASCII database completed all seven remaining migrations. The server reports the tested commit and healthy status. The restart report has no lost runs. - All 55 current-head checks passed; two unrelated Storybook checks were skipped. Full test, typecheck, build, runner, release, and E2E CI gates passed. The complete suite ran in CI; local verification used focused tests. - Greptile reviewed this exact commit at 5/5 with no findings. - Preserved failures: the initial unmodified-master startup failed at migration 0355 and was rolled back. A later build-cache path error in the deployment commands was corrected before the successful clean build; it required no source change. ## Risks The migration content changes, so receipt compatibility matters. The original checksum remains recognized to avoid replaying historical DDL. The tests compare complete later function definitions and receipt counts. The whitespace pattern contains encoded bytes; tests cover every ECMAScript whitespace character and preserve non-whitespace Unicode input. Database data and schema shape are unchanged by this repair. ## Model Used OpenAI GPT-6 through Codex, with repository tools, code execution, and browser verification. The exact served model variant and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
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cde944ed75 |
fix(workspaces): keep retained readers valid after cross-task wake coalescing (#16928)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work.
> - Before a run starts, repository admission checks every retained
reader of the physical repository root and of overlapping roots.
> - Each retained reader records the run, task, agent and responsible
user that the server admitted.
> - A wake for another task can coalesce into a running run. The merge
replaces `contextSnapshot.issueId` and `taskId` with the other task.
> - The retained-reader check used that mutable context task before the
run's immutable task binding. The old reader then looked like a changed
identity.
> - When a later run admits an overlapping root, such as a shared
project checkout that contains earlier task worktrees, every admission
on that root fails. The root stays blocked and no operator action can
repair it.
> - This pull request accepts a retained reader when its task matches
the run's immutable binding or its current context task.
> - The benefit is that legitimate wake coalescing no longer blocks a
shared root, and missing or truly mismatched identities still fail
closed.
## Linked Issues or Issue Description
Refs #16717 and #16832. Those cover retained readers whose run, agent or
task was deleted. This pull request covers a different cause: every
identity still exists, but wake coalescing changed the run's context
task. #16832 keeps identity mismatches fail-closed, so it does not fix
this case. Both pull requests change the same condition in
`execution-workspace-root-readers.ts`. The pull request that merges
second must rebase.
**What happened?**
A scheduled routine run failed in setup with `Repository root retains a
reader whose identity is no longer available` (403). Every later run of
the routine failed in the same way, for eight hours in a row. Two
earlier runs of the same agent were the retained readers. Each run
started for its own task and recorded its reader. About 10 to 16 minutes
later, a monitor wake for a different task coalesced into the running
run with reason `issue_execution_same_name`.
`mergeCoalescedContextSnapshot` set `contextSnapshot.issueId` to the
other task. `heartbeat_runs.issue_id` stayed on the original task,
because the `heartbeat_runs_set_scope_kind` trigger makes the binding
immutable. The readers were on per-task worktree roots, so nothing
failed at first. Then the routine's tasks changed to the shared project
checkout. That root contains those worktrees, so admission loaded the
two readers, compared them with the changed context task, and threw.
**Expected behavior**
A retained reader stays valid while its run, agent, task and responsible
user still exist and still match what the server admitted. A context
change from wake coalescing must not make the reader unavailable. A
reader whose task matches neither the run's binding nor its context must
still be rejected.
**Steps to reproduce**
1. Admit run R for task A on a nested root, for example
`<checkout>/.paperclip/worktrees/a`.
2. Coalesce a wake for task B into R. `contextSnapshot.issueId` becomes
B. `heartbeat_runs.issue_id` stays A.
3. Admit or publish another task on the parent root `<checkout>`.
4. Observe the 403 `Repository root retains a reader whose identity is
no longer available`. Every later admission on that root fails in the
same way.
**Paperclip version or commit**
Reproduced on `master` at
|
||
|
DottaandPaperclip
|
e5927e1db9 |
fix: give commentary its own default read permission (#16903)
## Thinking Path > - Paperclip lets people manage AI agents and inspect their work. > - Commentary collects agent suggestions and complaints for company members. > - Commentary used the permission for detailed agent-action audits. > - Owners, admins and viewers could therefore receive a permission error when they opened Commentary. > - This pull request gives commentary its own permission and enables it for all human company roles. > - Members can read feedback while task privacy and detailed audit access keep their own checks. ## Linked Issues or Issue Description Refs #16884, which added the Commentary browser. A search found no open PR for this permission fix. **What happened?** Commentary returned `Missing permission: audit:view_agent_actions` for company members without the detailed audit grant. Default owners, admins and viewers did not receive that grant. **Expected behavior** All human company roles can read commentary by default. A separate `commentary:view` permission controls this access. Private source tasks remain private. Commentary access does not grant detailed agent-action audits or CSV exports. **Steps to reproduce** 1. Sign in as an active company owner, admin or viewer without `audit:view_agent_actions`. 2. Open Audit, then Commentary. 3. Observe the permission error before this change. **Paperclip version or commit** Base commit: `7c58ea07b2`. **Deployment mode** Authenticated server or Cloud tenant. ## What Changed - Add `commentary:view` to the shared permission contract and all human role defaults. - Require that permission for commentary list and detail reads. - Add an idempotent upgrade migration for existing active human members. Preserve existing grants and scopes. - Add the commentary default when approving saved human invitation grants that omit it, including pre-upgrade invitations. Preserve explicit commentary scopes. - Add regression coverage for role defaults, permission removal, audit separation, private tasks and migration replay. - Update the API description, specifications, database notes and access maps. ## Verification - Passed 68 tests across commentary reads, role grants, old-invitation HTTP acceptance, migration replay, agent audit routes, access services and migration snapshot drift under the repository's locked dependencies. - Confirmed the new role and read tests failed before the implementation. - `node scripts/check-maps.mjs` passed. - Migration numbering and safety checks passed during the build. - Full `pnpm -r typecheck` and `pnpm build` passed locally after the invitation fix. - The final-commit CI matrix passed, including all test shards, typecheck, build, public-install checks and canary smoke. The redundant local `pnpm test:run` was stopped after the full CI matrix completed; the 68 focused local regressions passed separately. - The first install bypassed the stale lockfile and selected a newer diff-viewer API. The initial typecheck and build failed in that unrelated plugin. Installing the locked versions cleared both failures; the tracked lockfile is unchanged. - The first locked-dependency regression run hit the 15-second limit while importing the audit route graph in its first test. Moving that import into suite setup fixed the timeout; all 58 regressions then passed. - Greptile found that pre-upgrade invitations retain old grant lists. New helper and HTTP regressions reproduced this gap before the fix, then passed after approval added the missing commentary default. - Greptile reviewed the final commit at 5/5 with no remaining actionable findings. Its earlier thread is resolved. - No UI code changed. The permission tests use real disposable PostgreSQL databases and HTTP routes. ## Risks - The upgrade deliberately enables commentary for every existing active human company member, including viewers. Existing commentary grants retain their saved scopes. - Source-task privacy still filters previews, counts, searches and full messages. Agent-authenticated browsing remains denied. - Agent-action audit grants, detailed filters and CSV export permissions keep their current behavior. ## Model Used OpenAI Codex, based on GPT-6, with reasoning, repository editing and command execution. The exact runtime model ID and context window are not exposed to this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
||
|
DottaandPaperclip
|
7c58ea07b2 |
fix(issues): guard prepared task promotion by status version (#16893)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Integrations can prepare a backlog task before its assigned agent starts. > - A person can change its status or assignment during preparation. > - An unconditional promotion can replace that newer decision. > - Safe promotion needs a saved revision that includes every assignment path. > - This pull request checks that revision under the task row lock and derives policy cleanup from the locked row. > - The benefit is safe initialization recovery with the existing company, task, and run authority. ## Linked Issues or Issue Description Prerequisite #16896 has merged. This PR now targets master and contains only the conditional promotion API. The prerequisite fixed the confirmed baseline first-upload browser regression. **What happened?** A client that saves a task's initial documents and then sends an unconditional status update can override a concurrent status or assignment decision. The update validator previously dropped an expected version, so clients could not make this promotion conditional. Some direct assignment and release paths also did not advance the revision. **Expected behavior** A prepared task moves from backlog to todo only if its original status and assignment revision still matches. A stale request returns 409 before a task mutation, audit publication, or wake. Policy cleanup preserves unrelated saved settings. **Steps to reproduce** 1. Create a backlog task and save its statusVersion before preparing it. 2. Release its assignment, or change an assignee and then restore that assignee. 3. Send `{ "status": "todo", "expectedStatusVersion": <original revision> }` to its PATCH endpoint. 4. The stale promotion must return 409. A matching revision on an unchanged backlog task must succeed. Duplicate and related PR searches found no existing prepared-task promotion fix. ## What Changed - Accept an optional nonnegative expectedStatusVersion for exactly a status-only backlog-to-todo promotion. Reject extra public fields before parsing can discard them. - Check the current revision and backlog state under the issue row lock. Reject stale requests before checkout adoption or execution-control effects. - Add SQL migration 0358 to advance the revision for both assignee fields at the database boundary. Release, administrative release, direct writes, and assignment round trips now invalidate an old version. - Derive guarded policy cleanup from the locked row. Preserve review limits and protected authorization when removing a monitor. Reject derived ownership changes or review decisions. - Add schema, real HTTP/PostgreSQL, concurrency, migration replay, and policy regression coverage. Update the response type, OpenAPI, developer docs, and access map. ## Verification - Red before the initial fix: stale requests returned 200 instead of 409, validation removed the expected version, and a stale active task could adopt a checkout. - Review found two further defects. Four new release/direct-assignment tests showed unchanged revisions. The real HTTP/service test returned 422 for a valid two-field promotion after monitor cleanup. Helper tests also proved that cleanup lost valid review limits and protected authorization. All now pass after focused repairs. - Green: 124 route and policy tests, including 7 real Express/PostgreSQL cases, 37 existing route tests, and 80 policy/helper tests. The real row-lock race preserves a policy edit committed while promotion waits. - Green: all 23 database client tests, plus 9 focused assignment and replay checks. Historical migration 0227 receipt recovery cannot remove the new assignment trigger. Reapplying migration 0358 leaves existing rows unchanged and installs one trigger. Combined status/assignment writes increment once; unchanged assignees do not increment. - Earlier verification passed all 218 schema/route/service cases and the generated OpenAPI capability test. Rebased focused regressions passed all 27 selected cases. Final server TypeScript passed after all repairs; shared TypeScript passed. Migration safety/numbering, five-snapshot retention, map validation, and diff checks pass. - The baseline browser attachment case failed twice on the earlier head. Separate #16896 proved the lost-composer cause, passed 335 component tests and the real first-upload journey, and has green CI with a 5/5 review. No assertion or timeout was weakened. - Some early local checks were blocked by missing or stale sibling dependency artifacts. This worktree now has its own frozen offline install and standard SDK prerequisites. The failures and successful reruns remain in the task evidence. - Before rebasing, head `3304bb00de6ad6a248b5e046c008072ad20ac8f5` passed all CI (55 successful checks and one neutral), Greptile 5/5, and a secondary source review at 5/5 with no unresolved findings. The secondary reviewer did not execute project tests, inspect CI, or exercise a live agent journey. Earlier incomplete and must-fix assessments remain visible; both established findings are repaired above. - After #16896 merged, all five CAS commits were rebased onto master `87d9386ae637c652d1fed09d2046be1bcaeb413b`. Migration 0358 was regenerated because master added another 0357. Range comparison shows no other change to the CAS patches; inherited UI commits are absent. The original head is preserved locally. - Rebased head `1c0264e51a280b1dbf597725a7e42e72d4be1b1b` passes all 124 route/policy tests, 9 selected assignment/promotion tests, and all 24 database client/snapshot-drift tests. Database build, migration checks, generated snapshot linkage, five-snapshot retention (0354–0358), maps, and diff checks pass. Fresh-head CI and review are pending. No deployment or live agent journey was performed for this API. ## Risks - The guard supports prepared backlog promotion only. Other statuses or mixed public mutation fields return 422. A stale revision or non-backlog row returns 409. - Preserve the original version from a server that already advertises this guard before initialization. Older versions did not track every assignment path. Reconcile older or uncertain initialization instead of fetching a new revision and blindly retrying. - Migration 0358 is SQL-only and idempotent. It adds no table, column, or task backfill. Its separate trigger survives historical status-migration replay. - Existing authorization and unguarded updates remain in place. Guarded promotion does not provide a general lifecycle or review-stage control API. ## Model Used OpenAI Codex, GPT-6 family. The exact serving model ID and context window are not exposed by this session. Used tool calls, code execution, and test-first regression verification. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
||
|
Nicky LeachandPaperclip
|
313fb265db |
feat(plugins): invalidate runtimes when connector access changes (#16605)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Runtime preparation depends on access and credential state as well as tool definitions. > - Grant, membership, secret, and endpoint changes need committed invalidation. > - Their writers must acquire locks before journal fanout can lock agent rows. > - This pull request adds access hooks with the corresponding transaction guards. > - Plugins can refresh preparation immediately while task-time authorization remains authoritative. ## Linked Issues or Issue Description **What happened?** Grant changes, credential rotation and revocation, company access changes, and connector endpoint configuration do not request runtime synchronization. Journal fanout exposes lock inversions between credential persistence, access cleanup, and connection assignment writers. **Expected behavior** Committed access changes request runtime preparation without polling or credential values in the journal. Agent-specific secret bindings and new personal delegations affect their target agent. Company access changes remain conservative. Provider bookkeeping does not create preparation work. **Steps to reproduce** 1. Change an audience, delegation, membership permission, referenced credential, vault configuration, or endpoint instruction. 2. Expect a committed runtime event in the correct company and scope. 3. Run reconnect, credential refresh, SSH setup, or membership cleanup concurrently with related writes. 4. Expect both operations to preserve access checks and finish without a lock-order cycle. **Additional context** Final feature extraction from #16503. The earlier slices, #16604, and the separate delivery-test correction #16871 are merged. This PR is now the active change against master. The rebase preserves the merged assignment and definition recipient rules, Unicode selector semantics, and profile/reference transaction guards. ## What Changed - Add migration 0356 for grants, audiences, delegation, membership/permissions, secret bindings, referenced credentials and vaults, and chat/email endpoint configuration. - Keep events content-free. Ignore health, delivery, publication, Vercel verification, and GitHub webhook bookkeeping while retaining credential and repository-access changes. - Target agent secret bindings and all personal delegation changes to their old and new target agents. Coalesce delegation changes per transaction. - Lock existing grants before connections and credential persistence in OAuth and cleanup writers. - Reject superseded refresh leases before rotating stored credentials. Ignore lease acquisition and release when access metadata is unchanged. - Serialize audience replacement, validate membership, and preserve unchanged audiences. - Lock membership before permission-only saves and grant before Railway SSH setup. Individual delegation revocation locks its grant and target. Whole-grant and membership cleanup lock company recipients before deleting scoped delegations. - Lock grants and connection inputs before static-key reconnect writes. Lock company agents before cascading secret deletion; use a nonblocking secret lock and bounded retries to avoid a new cycle with credential writers. - Add PostgreSQL concurrency coverage for access writers and endpoint publication/configuration behavior. - Preserve the owner lock for plugin instance-secret removal; these secrets cannot use ordinary bindings. - Align Slack search refresh, callbacks, and disconnect with grant-before-connection locking. Recheck newly discovered grants without waiting before provider work. - Retry complete membership transactions when a credential deletion candidate is busy. Cover all four cleanup entry points and process company access in ID order. - Document final invalidation coverage and task-time authorization boundaries. ## Verification - Current head: `78aace55bef7f52bc5742b131e0b3961eb5c0f11`. All 1,061 tests across 23 affected suites pass. The named Slack authorization integration scenario also passes; it exercises authorization, refresh, disconnect, and rejection of a late callback. Server/database typechecks, migration safety and numbering, five-snapshot retention, feature maps, and diff checks pass. The complete PR diff was reviewed for secrets and personal data before push. Final acceptance: [CI run 39308303837, attempt 2](https://github.com/paperclipai/paperclip/actions/runs/39308303837) is green, with 55 successful checks and two optional Storybook skips. The current-head Greptile reassessment returned **Apex 5/5** at 19:16 UTC on 2026-10-19. Its full summary reports no actionable issues. Security passed, all threads are resolved, and GitHub reports no merge conflicts. The reassessment was requested as a standard review after the fixes; Greptile retained the Apex tier. - On this head, [CI run 39308303837](https://github.com/paperclipai/paperclip/actions/runs/39308303837) failed the unchanged adapter-utils HTTP/2 fixture with `EADDRINUSE` before READY. Its closed probe left a port handoff race. That test and its gateway are byte-identical on master. No upstream fix was found. The deterministic fixture correction is isolated in #16888; no adapter test changes are included here. The failed jobs recovered on retry without a feature source change. The original failure remains documented here, and #16888 carries the fixture correction separately. That retry demonstrates recovery; the held-probe negative control establishes the port handoff race. - Rebased onto master `194fc11406`, including merged #16604 and #16871. Replayed only the access-hook commit. Resolved OAuth, test, and documentation conflicts while retaining both sets of tests. Migration 0356 preserves the merged assignment/definition recipient rules, Unicode selector semantics, and profile/reference guards. - Apex returned 3/5 on `0fb65bc27`. Negative controls reproduce its Slack delegation and member-cleanup deadlocks (`40P01`) and unwanted Vercel/GitHub bookkeeping events. Slack grant writers now take their locks before the connection. A separate late-grant control reproduces `40P01` without the post-lock recheck; the complete guard passes. All four membership cleanup commands retry from a fresh transaction when the credential is busy. Tests verify successful cleanup and no journal rows from failed attempts. Credential IDs and repository-access changes still notify runtimes. - Earlier review corrections remain covered: static-key reconnect and cascading secret removal each reproduce `40P01` without their guards. Grant lease acquisition/release is ignored. Secret removal releases agent locks when a credential writer is busy. Instance-secret removal retains the owner lock and passes its public plugin API contention regression. Delegation updates and revocations target old/new agents; unrelated-peer, coalescing, unchanged-update, and rollback cases pass. Three negative controls verify the required whole-grant and membership cleanup guards after narrowing delegation scope. - Preserve prior acceptance failures: the first rebased 20-suite run passed 1,025/1,026; its only failure was a draft uninstall fixture blocking a random peer. Blocking the assigned agent corrected that assumption, and all 44 access/assignment tests passed. Later, all 1,044 tests across 21 suites, [CI run 39302185527](https://github.com/paperclipai/paperclip/actions/runs/39302185527), standard Greptile 5/5, and security passed on `0fb65bc27`. That did not clear the later Apex findings described above. Draft run 38975428081 failed a server shard; its cause was not re-investigated. A later green run does not establish that earlier cause. - Local fixture corrections are recorded separately from product failures: an assignment filename filter initially matched no file; the actual suite was included in full runs. A delegation fixture omitted its required creator, and a guard run omitted a query import. The new global-access cleanup fixture now uses its own user to avoid earlier fixtures' memberships. All were corrected before publishing their final iterations. - Local checks target affected services and real PostgreSQL boundaries. A full local build and repository-wide test run were not performed. Hosted CI supplies broader verification. Provider responses in tests are controlled; live provider behavior was not qualified. ## Risks Migration 0356 adds triggers without changing table schema. Apply it through the normal migration flow. Most access changes retain synchronous company-wide invalidation. Company fanout takes O(eligible company agents) locks and journal rows, without a fanout ceiling or mutation quota. Agent secret bindings and individual delegation changes retain narrower recipients. Events contain no credentials. Physical removal of non-instance secrets takes ordered locks on all company agents before cascading into bindings. This costs O(company agents) locks even for an otherwise unreferenced secret. Instance secrets cannot use ordinary bindings and retain their owner lock. A busy secret lock releases the transaction guards and retries up to three times. Continued contention returns a retryable conflict. Provider deletion stays outside that transaction; a retry resumes removal of an already disabled secret. Membership cleanup uses nonblocking credential guards and retries the full membership transaction. Slack search adds two grant queries, scoped to the subject and connection. Its retries occur before provider work or credential persistence. Each retry loop is limited to three attempts. Invalidation requests preparation; task-time authorization and provider session activation remain authoritative. Provider calls use fixtures; no live provider qualification is claimed. ## Model Used OpenAI Codex, GPT-6, with reasoning, repository inspection, code execution, and testing. The exact deployment model ID and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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|
DottaandPaperclip
|
e6dcd1e8e9 |
feat: add Commentary to Audit with filters and shareable messages (#16884)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Agents can submit suggestions and complaints while they work. > - Operators currently need database access to read those messages. > - That makes it hard to find feedback from one agent or share a specific message. > - This pull request adds a standard Commentary tab in Audit. > - Operators can filter messages, browse 50 at a time, and share links to full message dialogs. ## Linked Issues or Issue Description Refs #15367, which added feedback storage and agent submission. The duplicate search found no open PR for a commentary reader. **Subsystem affected** Server, shared API contracts, and the board UI. **Problem or motivation** Agent suggestions and complaints are stored but have no board reader. Operators must query the database to inspect feedback. **Proposed solution** Add Commentary to Audit without an experimental toggle. Show previews, agent and message-type filters, text search, and 50-message pages. Opening a row updates the URL. A copied URL opens the full message with its agent, task, and run context. **Alternatives considered** Direct database queries remain useful for operators, but do not provide a normal product workflow. An experimental setting would add setup to a read-only audit page. **Roadmap alignment** This completes the operator view for the existing feedback feature. It supports human oversight and does not change agent execution or task ownership. ## What Changed - Add company-scoped, board-only list and detail endpoints with audit permission and source-task privacy checks. - Return bounded previews and counts. Fetch full bodies only when a message opens. - Add the Commentary tab, search, filters, 50-row pagination, and URL-based selection. Audit tab destinations work in both layouts, with a classic sidebar entry for Commentary. - Add production Storybook examples for populated, filtered, linked, long, paginated, empty, loading, failed, denied, mobile, and light states. - Update API documentation and the feature and agent access maps. ## Verification - Final head `abc4a251c14cfbfec007542214beec528f2b18bf`: 55 checks pass; two conditional Storybook checks are skipped. The PR workflow is successful. Greptile is 5/5 with all findings resolved. - Focused database, HTTP, submission, OpenAPI, and UI regression tests cover company isolation, task privacy, filter bounds, 50-row pagination, and copied message links. - Browser Storybook journeys cover row opening, direct links, combined filters, search, and pagination. Storybook uses synthetic API fixtures; database authorization is tested separately. - Token gates, feature maps, and Storybook catalog validation pass. - `pnpm -r typecheck`, `pnpm build`, and `pnpm build-storybook` pass on the rebased branch. All 80 focused tests and all 37 Audit tests pass, including the real App route table in both layouts, task grant/revocation through HTTP, deleted-task privacy, and URL UI regressions. The full suite passes in the parallel PR CI matrix. The local serial full-suite run was stopped before completion after checking the recorded 94-minute serial duration. Local focused tests, workspace typecheck, production build, and final server/UI checks pass. - The linked-message Storybook test initially asserted against the loading dialog. It now waits for the message body; both direct-link and row-open journeys pass. - Native and legacy deleted-task privacy regressions failed before the fix and pass afterward. The reader checks the run task binding after the task foreign key clears. - A rapid search-then-agent-filter browser regression reproduced the search overwriting the selected agent. The pending search now restarts when URL filters change. The same browser test passes with both filters applied. - CI found two existing AuditHub assertions that still expected five tabs. They now assert the six-tab model and selected-company Commentary rendering. All 37 Audit tests pass. All other test and build jobs passed before this test-only correction. - The [agent-chat attachment browser test](https://github.com/paperclipai/paperclip/actions/runs/39307881171/job/118250189664) timed out waiting for an attachment preview. The [same shard passed on the prior head](https://github.com/paperclipai/paperclip/actions/runs/39306658703/job/118245498343) with identical application code; the intervening change only updates AuditHub unit tests. The single retry passed on the same head. The precise cause of the earlier failure remains unconfirmed. ## Risks - Commentary may contain sensitive task context. The reader requires board access and audit permission, and filters source-task visibility before returning previews, counts, or full bodies. - Text search scans stored message bodies. Pages are bounded and full bodies are fetched on demand. - Offset pagination can shift if new messages arrive while paging. Ordering uses timestamp and ID for stable ties. - No database migration or agent submission behavior changes are required. ## Model Used - OpenAI Codex, GPT-6 family, with reasoning, tool use, browser interaction, and code execution. The exact backend model ID and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
||
|
Nicky LeachandPaperclip
|
194fc11406 |
feat(plugins): invalidate runtimes when tool definitions change (#16604)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Lifecycle plugins must refresh runtime preparation when tool definitions change. > - Standing assignments alone do not cover catalogs, profile entries, or policies. > - New journal hooks must preserve the order used by setup finalization. > - This pull request adds tool-definition invalidation and its required writer guards. > - It leaves credentials and provider access changes for the next independent capability. ## Linked Issues or Issue Description **What happened?** Catalog, profile-entry, policy, gateway, and connection-configuration changes do not request agent runtime synchronization. A new profile-entry trigger also exposes a deletion/finalization deadlock if the child row is changed before its parent is locked. **Expected behavior** Committed tool-definition changes advance runtime revisions without polling. Bookkeeping does not. Entry changes and profile replacement use a consistent parent/reference lock order and commit atomically. **Steps to reproduce** 1. Change a catalog descriptor, profile entry, policy, or connection configuration. 2. Expect committed runtime events for the affected agents. 3. Run profile-entry deletion concurrently with setup finalization while both wait for an agent row. 4. Expect both operations to complete without PostgreSQL deadlock 40P01. **Additional context** Extracted from #16503. Catalog publication #16602 and standing assignments #16603 are merged. This PR is rebased onto master and is the active review. It addresses the original Apex profile-entry deletion finding. Credential/access hooks #16605 remain a draft without review requests. ## What Changed - Add migration 0355 for application/connection configuration, catalog, profile-entry, policy, and MCP gateway invalidation. - Preserve transaction coalescing and ignore health bookkeeping and trust-rule usage counters. - Keep credential-only fields outside this migration's coverage. - Preserve merged recipient scoping for bindings and installations. Profile-entry edits resolve old/new standing profile bindings. Policy edits resolve old/new agent selectors with their intersection/list semantics. - Lock old and new profile-entry references before parent profiles and child mutations. Recheck the reference set under the parent lock, retry changed snapshots up to three times, and merge unspecified fields from the locked profile. - Make entry add/edit/delete and profile replacement transactional, including validation and profile reads on the reserved connection. - Lock policy rows in ID order and change priorities in one statement so scoped agent locks are ordered across the full set. - Lock the managed profile before connection removal deletes its entries in the same transaction. - Update assignment tests whose old absence assertions are superseded by expanded configuration coverage. - Document the supported capability and the remaining credential/access boundary. ## Verification - Final head: `809fcb11794bfb12c545af0a2f96ab9bc2b570a2`. It is rebased onto master with merged #16623. GitHub reports no merge conflicts. [CI run 39293925136](https://github.com/paperclipai/paperclip/actions/runs/39293925136) has 55 successful checks and two optional Storybook skips. - Standard Greptile returned an independent 5/5. The final Apex review returned 5/5 on this exact head at 17:47 UTC on 2026-10-19. Its summary explicitly clears this PR for merge independently of draft #16605. The security scan passed. All review threads are resolved. - Two real-PostgreSQL negative controls reproduce `40P01` without the old-reference guard or the concurrent-snapshot check. Both regression tests pass with the final correction. Server typecheck, migration safety and numbering, five-snapshot retention, journal history, feature maps, and diff checks pass. The actual PR diff was scanned for secrets and personal data before push. - The final 15-suite local run passed 821/822 tests. The one failure was in the unchanged runtime-delivery test: a startup callback changed its global callback count during an independent transaction. The test-only correction is isolated in #16871. That PR passes all 17 runtime-hook tests, server types, hosted CI, and standard Greptile 5/5. Its notification-disabled control fails at the independent event-delivery assertion. No changes from #16871 are included here; this feature head passes hosted CI independently. - Earlier affected-suite runs passed 814 tests after rebase and 820 tests after recipient and whitespace corrections. Four affected suites passed 514 tests before the second reference-contention regression was added. Single-connection tests cover entry add, edit, delete, and replacement. Validation and profile reads use the reserved transaction connection. - Review fixes have negative controls: the old code hangs with a one-connection pool; parent-lock omissions deadlock entry deletion or app removal against setup finalization; per-row policy reorder deadlocks under contention; unscoped triggers journal unrelated peers; default SQL trimming misses JavaScript whitespace. Corrected cases pass. Selector tests cover all 25 ECMAScript whitespace characters. Recipient tests cover repeated edits, old/new targets, ignored bindings, rollback, coalescing, and company scope. The definition suite now has 28 cases. - Earlier standard scores that depended on #16605 were not accepted as independent clearance. The first Apex review returned 4/5 for replacement versus application deletion. The final correction locks old and new references, checks the reference set again under the parent lock, and retries before any mutation. The final independent reviews clear that correction. - Preserve prior failures for acceptance: draft run 38975432017 had failures whose causes were not re-investigated. Run 38990400765 exposed the unrelated durable-resume watchdog race, fixed in merged #16623. In run 39287657148, two jobs reported cancellation without a failed-test summary; the cause remains unknown. Both passed on retry without source changes. Initial local fixtures and SQL bindings also needed correction: an internal helper name was replaced with public `archiveConnection`, unchanged priorities were changed to exercise reorder, a driver timestamp was bound as ISO text, and a superseded company-fanout assertion was updated. These recovered checks do not establish a cause for the unexplained CI failures. - Local checks target the affected services and real database boundaries. A full local build and repository-wide test run were not performed. Hosted CI supplies the broader checks. Provider responses in tests are controlled; live provider behavior was not qualified. ## Risks Migration 0355 adds statement triggers without changing table schema. Apply it through the normal migration flow. A tool-definition event can advance a runtime revision without changing the bounded assignment snapshot. Consumers still need authorized readers for definitions. Credential-only changes, grants, secrets, and endpoints remain for the access-hook migration. Profile replacement now rolls back as a unit if any entry fails. Binding and install notifications retain scoped recipients. Profile-entry changes use standing bindings, and policies use old/new agent selectors. Unscoped policies, company-bound profiles, and other conservative definition changes retain synchronous transaction-atomic company-wide fanout: O(eligible company agents) locks and journal storage, without a fanout ceiling or mutation quota. This retains the accepted tradeoff from #16603 for company-wide changes. ## Model Used OpenAI Codex, GPT-6, with reasoning, repository inspection, code execution, and testing. The exact deployment model ID and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run local checks; results and the isolated test failure are recorded above - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Devin FoleyandClaude Opus 5.5
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7fed88e78d |
fix(server): retry heartbeat run read checks after a dropped connection (#16857)
`canActorReadHeartbeatRun` now wraps the issue existence read and the `issue:read` authorization decision in separate `retryIdempotentDatabaseOperation` calls, so one pooled-connection drop (`CONNECTION_CLOSED`) no longer fails heartbeat run, activity, live-event and issue-source reads. Adds a regression test and a note in doc/DATABASE.md. Refs #15248. Refs #15300. Refs #14773. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> |
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DottaandPaperclip
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9077748894 |
Remove the Pipelines experiment and preserve its data (#16834)
## Thinking Path > - Paperclip manages AI agents and their work. > - Pipelines was an unused experiment with its own UI, API, CLI, and automation. > - Keeping it leaves unsupported product surfaces and extra task-detail queries. > - Removing the experiment must preserve data that users already saved. > - This pull request removes the feature and keeps its database schema and migration history. > - Cases and Routines remain available as separate features. ## Linked Issues or Issue Description **What existing behavior does this improve?** Remove the unused Pipelines experiment across the application. **Current behavior** The experiment includes pipeline boards, stage settings, case automation, review queues, learnings, permissions, and CLI commands. Task detail also queries pipeline links. **Proposed behavior** Remove all these product surfaces and their implementation. Preserve existing tables, records, and documents. Ignore the retired boolean in older managed configurations so upgrades still start. **Breaking changes** Pipeline URLs, API endpoints, CLI commands, and `pipelines:write` are removed. Task detail no longer includes the old `linkedCases` field. The independent Cases API remains available. No database migration or cleanup is included. Related feature work: #7907, #9110, #10905, #11375, #13004, #14671, #16133. Related issues: #9663, #10310, #10312. This removal supersedes the feature; it does not implement those pending enhancements or delete their saved data. ## What Changed - Remove Pipeline UI pages, navigation, gates, clients, query keys, helpers, and unused design tokens. - Remove Pipeline REST routes, services, automation dispatch, task-detail queries, and OpenAPI discovery. - Remove the CLI commands, shared contracts, experimental flag, catalog entry, and permission defaults. - Remove feature-specific tests, tutorials, smoke scripts, maps, and Storybook examples. - Preserve database schema, migration history, and the reserved document key used by old records. - Keep Cases routes independent and cover obsolete stored and managed settings. ## Verification - Passed: `pnpm build` and `pnpm -r typecheck`. - Passed: targeted settings, managed configuration, sidebar, settings UI, routing, and feature-catalog tests. A first sidebar run caught a shared Workspaces icon import; the import was restored and the sidebar rerun passed. - Passed: 40 tests covering Cases routes, OpenAPI discovery, retained Pipeline table constraints, and schema snapshot drift. - Passed: token gates, map validation, generated API metadata check, Storybook catalog validation, and 28 map/catalog tests. - Passed: isolated local browser verification of navigation and Experimental settings with Pipelines absent; Cases and Routines still open normally. Live GET/POST requests to retired Pipeline endpoints return 404, and the retired setting is absent. CLI help has no Pipeline commands. - Passed: 22 access-service and agent-default-grant tests after restoring unrelated permission assertions flagged in review. - Local full run: `pnpm test:run` reported one failure in the unchanged workspace-runtime port-allocation test. That test passed in an isolated rerun. The long local run was stopped after full CI passed; it is not reported as a complete local pass. - Passed: all 56 checks on `def9181f3a4491d95fca1d38e9739f5b821aae3e` (2 conditional checks skipped), including build, typecheck, test shards, and browser suites. Eleven interrupted CI jobs reported “The operation was canceled”; their one-time retry passed. [CI run](https://github.com/paperclipai/paperclip/actions/runs/39255211006). - Greptile: 5/5 on the final commit, with the only review finding fixed and resolved. - Sandbox socket restrictions affected the first build/API test attempts. The same commands ran with local sockets available. ## Risks - Existing Pipeline clients must stop using the removed endpoints and commands. - Existing data remains in the database and backups, but the removed UI no longer displays it. - Historical boolean `enablePipelines` values are ignored. They cannot restore the feature. - Cases and Routines must retain their separate behavior. Targeted route tests cover this boundary. ## Model Used OpenAI Codex, GPT-6, with repository inspection, editing, shell execution, and browser verification. The exact deployed model ID and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Devin FoleyandPaperclip
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1558d9962c |
fix(idle): exclude completed feedback history from background work (#16764)
Allow private feedback history and acknowledged uploads to stop blocking idle sleep. Pending, failed, unfamiliar, and inconsistent delivery records remain blocked; preserve all other work and cleanup gates. Verified with 220 idle-safety tests, workspace typecheck/build, full CI, and Greptile Apex 5/5 on the reviewed head. Local full-suite limitations and isolated rechecks are documented in the PR. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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Devin FoleyandPaperclip
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5dced3c766 |
perf(tools): narrow profile and attention catalog reads (#16761)
Read only the catalog, connection, and invocation fields needed by profile summaries, reviews, and attention counts. Preserve company scope and response contents while reducing query payloads. Verified with 445 affected service tests, workspace typecheck/build, full CI, and Greptile Apex 5/5 on the reviewed head. Local full-suite limitations and isolated rechecks are documented in the PR. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
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1f27427ffd |
perf(server): batch retained workspace reader identities and policies (#16683)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Task startup checks who can read each physical workspace. > - A shared root retains the identities of earlier runs. > - The service reloads the same agents, tasks, projects and run policies for each reader. > - Database round trips grow with the retained run history and hold the company provenance lock. > - This pull request batches these reads within each guarded operation. Each run keeps its own identity and policy. > - The benefit is less task preparation time while current access checks remain in place. ## Linked Issues or Issue Description Refs #16424. **What existing behavior does this improve?** Workspace admission, repository publication and batched read authorization. **Current behavior** A synthetic shared workspace with 64 retained readers makes 680 SQL calls during a publication check. The same principals are loaded repeatedly. **Proposed behavior** Load retained identities and saved policies in batches of at most 500 IDs. Load project settings once per guarded operation. Reload records and permission grants on the next operation. **Reason and benefit** The local service benchmark with an injected 4 ms loopback round trip changed from about 7.0 seconds to 0.5 seconds and from 680 SQL calls to 47. This measures synthetic PostgreSQL data, not hosted response latency. ## What Changed - Extract retained-reader identity loading and acquisition trust checks into a focused service module. Select only the identity and trust fields used by these checks. - Batch company-scoped run, agent and task lookups. Keep each run's task binding, responsible user and policy checks. - Batch saved run-policy reads in read authorization. Keep company and agent identity checks and ordinary lookup behavior for noncanonical IDs. - Reuse project settings within one root authorization operation. - Add query budgets, identity failures, batch-boundary coverage, policy comparisons and grant-revocation tests. - Document snapshot lifetime and query scope. ## Verification - PASS: 197 focused workspace and authorization tests. - PASS: `pnpm -r typecheck`. - PASS: `pnpm build`. - PASS: all current-head hosted CI test groups, Runner checks, E2E shards, security checks and builds (55 successful checks; two unrelated Storybook jobs skipped). The local monolithic `pnpm test:run` was stopped after all equivalent hosted CI groups passed. It has no complete local result; the hosted matrix supplies the full-suite proof. - Synthetic real-PostgreSQL benchmark: 383 workspaces and 64 retained readers; 4 ms simulated loopback round trip. Publication check: 680 -> 47 SQL calls; 7.0-7.1 s -> 0.48-0.51 s. Three concurrent checks: 20.0-23.1 s -> 1.52-2.12 s. Setup and provider execution are excluded. Live reply timing remains unverified. - Regression coverage compares complete batched and ordinary authorization decisions. It checks distinct saved policies for the same principals, missing identities, company mismatch, task mismatch, responsible-user mismatch, revoked project grants and changes after the first operation. - No new schema, API or UI contract. ## Risks - A batch must not combine different runs' identities or policies. Each lookup and policy decision retains its run, company and agent checks. - Snapshots last for one guarded operation. Later admissions and publications reload data. No authorization cache survives the operation. - Restricted project trust checks keep their existing per-run validation path. Hosted latency remains an acceptance gate. ## Model Used OpenAI `gpt-6.1-sol` through Codex, with xhigh reasoning, code execution and tool use. The runtime does not expose the configured context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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5f5602bba7 |
feat(plugins): synchronize standing connection assignments (#16603)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Lifecycle plugins prepare agent runtimes outside the control plane. > - They need committed connection assignment changes without polling. > - A reader and its revision hooks must cover the same fields. > - This pull request adds a bounded standing-assignment snapshot and its matching hooks. > - Plugins can react to assignment changes while execution keeps its existing access checks. ## Linked Issues or Issue Description **What happened?** The agent runtime reader does not expose standing connection assignments. Changes to connection installs, active profiles, and connector feature switches do not request synchronization. Adding company-wide invalidation also exposes lock inversions in assignment writers and AI adoption. **Expected behavior** The owning lifecycle plugin can read a bounded assignment snapshot. Every committed change to its stored fields advances the runtime revision. Rollback removes both the change and its event. Assignment writers finish without a lock-order cycle. **Steps to reproduce** 1. Install a connection or bind an active profile to an agent. 2. Read its runtime inputs through the owning lifecycle plugin. 3. Rename or disable the connection, revoke the assignment, or switch connector features. 4. Expect a committed runtime event and an updated snapshot without periodic polling. **Additional context** Extracted from #16503. Catalog publication #16602 and the separate test maintenance PRs #16601 and #16610 are merged. This PR now targets master and is the active review. Tool-definition hooks #16604 and access/credential hooks #16605 remain drafts without review requests. ## What Changed - Add SDK types and an owning-plugin runtime snapshot for installed connections, active profile IDs, and effective connector feature switches. - Reject more than 512 connections or 128 active profiles instead of returning partial data. - Add migration 0354 for the exact stored fields used by the snapshot, with transaction-coalesced invalidation. Agent-targeted bindings and installs notify only their old/new target agents; project/routine/issue/gateway bindings are outside the snapshot and produce no notification. - Use ordered agent locks that are compatible with foreign-key references and exclude runtime readers. Prelock complete old/new target sets before replacing assignments or restoring managed profiles. - Record one company baseline at delivery startup for process-managed feature overlays. - Lock assignment inputs before install saves, task completion, and email assignment. Setup finalization reads the locked connection state and prelocks company agents before activating, re-enabling, or reviving a profile. - Make profile binding and reassignment writes transactional and lock parent profiles first. Keep target validation and profile/detail reads on the reserved transaction connection, including with a one-connection pool. - Lock company agents in order before validated AI adoption. Keep adoption and shared configuration writes at `FOR NO KEY UPDATE`, avoiding an upgrade that can deadlock foreign-key inserts during gateway creation. Configuration fields cannot change agent identity; lifecycle transitions and deletion retain their existing locks. - Document supported coverage and the inputs reserved for later PRs. ## Verification - Thirteen affected suites passed: 757 tests covering runtime hooks/assignments/skills, concurrent skill publication, tool access/catalog, task connection intents, lifecycle delivery, email, AI accounts, migration histories, snapshot drift, and the agent lifecycle module. This includes the merged catalog PR's OAuth and overlapping-refresh regressions. - The assignment suite passes all 24 cases, including bounded snapshots, company/agent isolation, rollback, health-field no-ops, process-start feature overlays, and real lock contention. - Four one-connection PostgreSQL regressions reproduce the earlier helper-read hangs before the correction; bind, unbind, delete, and reassign complete with it. The earlier adoption/gateway probe exposed both lock upgrades: changing only validation still deadlocks in shared configuration. Current scoped coverage verifies adoption with agent-targeted binding writes; gateway-only bindings no longer invalidate this snapshot. - The original ordered-adoption regression reproduces PostgreSQL `40P01` without ordered company-agent locking. Scoped-recipient tests reproduce unrelated-peer journaling before the trigger correction and verify repeated bind/unbind operations leave peers untouched, ignored binding types produce no events, both reassignment recipients are reached, and coalescing remains intact. - Six replacement contention cases cover installs, existing setup, activation, re-enabling, profile revival, and profile reassignment. Negative controls reproduce `40P01` without the corresponding target/company prelocks; all cases pass with the guards. Activation decisions use the connection row reread under lock. - An initial contention fixture failed because its settings connection lacked an MCP URL. Supplying the fixture URL and controlled lookup corrected that test setup error. - Server typecheck, database migration numbering/safety, five-snapshot retention, feature-map structural validation, and `git diff --check` passed. Migration metadata preserves historical journal entries and adds no schema change. The complete diff was reviewed for secrets and personal data before push. - Earlier hosted PR CI runs 38983440861 and 38985530069 passed; the superseded promotion run 38983440470 was cancelled. Superagent acknowledged the recipient fix and accepted the documented company-wide cost at `359b5b2f30a8a0248177367e458663d5379810d1`. Its two standard Greptile summaries were conditional on a later setup correction and were not counted as independent acceptance; the setup correction is now included here. - At `7da246aab46274db1a120a0546abbb404c5427c7`, hosted PR run 38986958988 passed: all 55 checks succeeded, with two optional Storybook checks skipped. Superagent passed, all review threads are resolved, and standard Greptile independently returned 5/5 with no blocking findings (review completed 2026-10-17 00:40 UTC). Apex independently returned 5/5 with no actionable findings (completed 2026-10-17 00:50 UTC). CI was rechecked after Apex and remains green; the branch is mergeable against master. Full local build and repository-wide tests were not run. ## Risks Migration 0354 adds database functions and triggers without changing table schema. Apply it through the normal migration flow. Agent-targeted bindings and installs only notify their affected agents. Explicit company-wide assignments, connection metadata, profile activation/removal, and connector feature switches retain synchronous, transaction-atomic company fanout. Each such transaction takes ordered row locks and inserts up to one connector runtime event per eligible company agent: O(number of eligible agents) work and journal storage, with no company-size cap or cross-transaction mutation quota. This remains an intentional scope tradeoff for this PR; deferred fanout is not implemented. Many of these conservative changes can request preparation even if an individual snapshot stays unchanged. Snapshot limits fail closed. This PR provides desired assignments, not credentials or task authorization. Later PRs must add mutation coverage before consumers can rely on immediate synchronization of tool definitions or credentials. ## Model Used OpenAI Codex, GPT-6, with reasoning, repository inspection, code execution, and testing. The exact deployment model ID and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Devin FoleyandPaperclip
|
4de6335c3b |
perf(server): trim saved run JSON from agent authentication (#16577)
## Thinking Path > - Paperclip coordinates AI agents that work for companies. > - Agent JWT authentication checks each request against its saved run. > - Saved runs can contain large prompts and result payloads. > - The first run lookup needs only identity fields, cancellation state, and the conversation flag. > - Reading all saved JSON transfers data that this lookup does not use. > - This PR selects the required JSON fields in PostgreSQL and preserves the existing authorization decisions. ## Linked Issues or Issue Description **What existing behavior does this improve?** The initial saved-run lookup in agent JWT authentication. **Subsystem affected** Server authentication and database queries. **Current behavior** The lookup transfers the full context and result JSON on each request. It uses only the cancellation state and conversation flag from those values. **Proposed behavior** Select the required JSON fields in PostgreSQL. Keep the run, company, and agent predicates. Read current state on every request. **Reason and benefit** A synthetic lookup with a 96 KiB prompt and 4 KiB result returns 102,520 JSON bytes before this change and 134 bytes after it. This reduces data transferred by this query. **Breaking changes** None intended. Identity fields, write revocation, read access, and cancellation response codes retain their current behavior. Related: #9280 addresses authentication round-trip counts. This PR only reduces the data returned by the existing initial run lookup. ## What Changed - Extract the initial run lookup and select only the JSON fields that authentication consumes. - Add real PostgreSQL tests for legacy JSON shapes, fresh cancellation state, payload size, and run/company/agent scope. - Add a reproducible benchmark that loads the original query from an explicit baseline commit. - Document the lookup and benchmark. ## Verification - Baseline: `06689c1b3410000bcd65ff40cb469e600209c4db`. - `pnpm -r typecheck`: passed. - `pnpm build`: passed. - Final server typecheck: passed. - Final-head GitHub checks: all green at `2be1c38e6bf51616b69993cf84cee1eef9657517`. Apex: 5/5, zero unresolved threads, conflict-free. - `pnpm check:module-boundaries`: passed. The standalone synthetic benchmark now uses the existing root benchmark directory and resolves Drizzle through the server workspace. - Focused HTTP middleware and database tests: 29 passed on real Homebrew PostgreSQL 16.14. The SQL test compares 270 combinations of status, cancellation JSON, and conversation JSON. It also checks fresh state and company/agent/run scope. - Broad native verification: 873 passed across the HTTP middleware, SQL projection, run diagnostics, and native executor suites. - The default local full command completed its general server lane with 12,090 passed and 8,885 skipped tests. It could not finish the root workflow: the host could not start the bundled PostgreSQL; a diagnostics assertion matched a directory name; and Git fixtures retained the host default branch. These failures remain in the verification record. All 68 failed files now pass on replay with disposable Homebrew PostgreSQL, an isolated checkout, and command-scoped Git defaults. The 68-file replay passed 2,588 tests and left two email skill-resolution failures. Moving the checkout outside an unrelated ancestor skills directory resolved those last failures: all 44 tests in that file passed. Product code and test assertions were unchanged for these host adjustments. Benchmark command: ```sh pnpm --filter @paperclipai/server exec tsx ../scripts/benchmark-agent-authentication.ts --baseline-ref=06689c1b3410000bcd65ff40cb469e600209c4db ``` The final benchmark ran at treatment commit `2be1c38e6bf51616b69993cf84cee1eef9657517` with a clean worktree. The local run used PostgreSQL 16.14 and the maintained test constructor seam to start disposable Homebrew clusters. The bundled PostgreSQL binary could not start on this host. Both versions use the same schema and predicates. Each case has two warmup rounds and ten measured rounds with alternating order. Random content prevents unrealistic compression. Complete authentication decisions match. | Context / result | Before JSON bytes | After JSON bytes | Before median | After median | | --- | ---: | ---: | ---: | ---: | | 1 KiB / 4 KiB | 5,240 | 134 | 0.157 ms | 0.157 ms | | 96 KiB / 4 KiB | 102,520 | 134 | 0.331 ms | 0.140 ms | These are local query round trips, including result transfer and decoding. The small control has no material latency gain. The large case improves by about 2.4x. Both plans read the same single row. The primary result is reduced response size. This does not measure HTTP latency, server CPU savings, or fleet-wide cost savings. Full samples and plans are retained with the verification evidence. ## Risks - JSON types must retain their meaning. The real database tests compare the consumed authorization contract with the original projection, including SQL null, JSON null, scalars, arrays, objects, string booleans, and cancellation states. - The change covers the first JWT run lookup. Later run identity capture keeps its existing full-run reads and transaction locks. Those reads remain a separate cost. - The change adds no schema migration or authorization cache. ## Model Used OpenAI GPT-6 through Codex, with reasoning, code editing, and shell tools. This session did not expose a more specific serving model ID or its context window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
9f4a956b90 |
Add durable agent runtime synchronization hooks (#16499)
## Thinking Path > - Paperclip manages agents and their runtime configuration. > - Plugins can maintain external agent computers. > - Configuration and file saves currently miss durable plugin delivery. > - A transient activity notification cannot recover after interruption. > - This pull request adds an opt-in agent runtime resource stream. > - The existing dispatcher delivers and acknowledges its committed work. > - Plugins can prepare computers when configuration changes. ## Linked Issues or Issue Description Related: #15631 and #16203 establish agent lifecycle and native durable delivery. **Problem** Plugins cannot reliably react to agent configuration and instruction changes without polling or waiting for execution. **Proposed solution** Add an opt-in `agent_runtime` stream to the existing resource journal. Record changes at the database mutation and managed file audit boundaries. Wake the dispatcher with content-free commit notifications. Provide scoped runtime inputs to the selected lifecycle plugin. **Alternatives considered** Route-only activity events miss service and background writers. Scheduled scans delay changes and repeatedly query unchanged state. **Roadmap alignment** This extends the existing plugin and agent configuration work. ## What Changed - Add durable update/delete events for agent runtime state, including an existing-agent baseline. - Capture configuration changes, instruction edits, deletion, restore, and managed run writeback. - Add commit notifications and a reconnect scan. Register one listener for configured, enabled runtime subscribers. Release it when none remain. - Keep HTTP startup independent of queued plugin callbacks. - Add `ctx.agents.getRuntime`. Require lifecycle capability, invocation company, enabled plugin, and owning lifecycle selection. - Keep legacy agent/project subscriptions isolated. Manual inbox reads retain both legacy streams. - Resolve recovered instruction paths without reading or hashing bundle contents. Use the company reporting graph for runtime health. - Repair missed file events on identical save/deletion retries after a journal failure; preserve content tokens and conditional-write checks. - Correlate file audits with runtime revisions to deduplicate recorded retries without a new table. Bound the lookup with the existing company/timestamp index. - Document the contract, migration, access boundaries, and session-connection requirement. ## Verification - Rebased the full stack onto origin/master after #16507. - Final replayed stack: `pnpm -r typecheck` and `pnpm build` passed. - All 132 affected runtime, skill, connector, publication, instruction, managed-agent, and delivery tests passed after the latest-master rebase. Workspace typecheck and build passed. - Journal failure injection verifies recovery on identical file writes, deletions, and instruction retries from an acknowledged inbox. - Deduplication follow-up: 80 runtime/instruction/delivery tests and server typecheck passed. Repeated retries create no audit/events; old hashes returning after an intervening commit still repair delivery. Built-in/native instruction writer regressions passed all 56 tests. - PR 1 follow-up tests cover valid/cyclic reporting chains, listener registration failure, multiple subscribers, global/company disable, re-enable, unload, and startup with blocked callbacks. - Database coverage includes rollback, journal failure, no-op suppression, file saves/deletion, ordering/replay, owner/company denial, independent-client commits, and real listener loss/reconnect. - SDK/shared suites passed 1,059 tests during implementation. CLI/delivery regressions also passed. - Migration safety, map checks, diff whitespace, and local secrets/PII scan passed. - Hosted CI and security checks are fully green at `b296405e2`. Standard Greptile and Apex both returned 5/5 with no unresolved findings. - The broad local suite encountered an unchanged diagnostic test that rejects the word "private" from an error stack. This worktree lives under /private/tmp. The same unchanged diagnostic suite passed all 108 tests in the original checkout. Hosted full-suite checks provide exact-head verification. ## Risks - Apply migration 0347 before enabling a runtime subscriber. Runtime notifications require session-level PostgreSQL LISTEN. Transaction-mode poolers are unsupported for this opt-in feature. - Database triggers share the mutation transaction. Journal failure prevents configuration commits. Trigger work adds a journal insert to relevant changes. - Filesystem publication and SQL commit are separate boundaries. Direct filesystem edits do not emit hooks. External clients must fence stale revisions and retain conditional-write checks. - The reader returns only that plugin's own instance secrets. Keep them out of UI data, logs, plugin state, and agent files. - No private transport integration or live remote computer qualification is included. ## Model Used OpenAI Codex, GPT-6, with reasoning, repository inspection, code execution, and testing. The exact deployment model ID and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub references) - [x] My branch name describes the change and contains no internal Paperclip ticket id - [x] I have run tests locally and they pass (focused suites; broad local limitation documented above) - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
|
69eb3b6eff |
perf: reduce repository admission filesystem and write overhead (#16425)
Reduce repository preparation latency by resolving each distinct workspace path once per scan, loading overlapping root provenance, and batching source retention writes. Preserve company authorization, fresh alias checks, and preparation timing. Add a reproducible benchmark and regressions for source identity retention, symlink retargeting, and bounded filesystem and database work. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
|
854ab294cc |
fix: restore repository admission and Claude startup on Linux ARM64 (#16372)
Batch retained workspace admission reads while preserving individual privacy and trust decisions. Preserve bounded saved-policy projections when integrating current master, and qualify the pinned Claude executable on Linux ARM64.
Verified exact head
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DottaandPaperclip
|
66724b8ce0 |
perf(auth): project only required run context fields (#16380)
Project only the required JSON fields for saved-run policy and direct-parent report authorization. Preserve current reads, JSON types, identity checks, permission decisions and legacy task-key precedence. Validation: 186 affected cases; 17 database transfer-budget cases after the shared startup-timeout correction; full typecheck/build; exact-head full CI, E2E, Superagent and Apex 5/5. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
|
c41e00bca4 |
fix(server): index workspace source task enumeration (#16342)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Agent startup checks access to every source retained by a workspace. > - Repository admission repeats these checks while it holds a company lock. > - PR #16334 indexed the workspace privacy query. The next source-task query still cast the task primary key to text. > - That second query scanned company history for every workspace and delayed other agent launches. > - This pull request keeps the task column indexed and guards the retained identifiers before conversion. > - The benefit is faster startup with the same source validation and access decisions. ## Linked Issues or Issue Description Refs #16334. **What happened?** Agent launches still spent minutes preparing repositories after the first authorization query fix. The source-task lookup scanned 14,191 task rows for one matching source. **Expected behavior** Source validation should use the task primary key and workspace-binding index. It must still reject missing, malformed, noncanonical, and foreign-company sources. **Steps to reproduce** 1. Seed company task history and a workspace with attached and retained source tasks. 2. Call `assertTaskWorkspaceAccess` and capture its source-task SQL. 3. Run `EXPLAIN (ANALYZE, FORMAT JSON)` on that query. The baseline scans unrelated task history. ## What Changed - Convert retained text identifiers with the existing canonical UUID guard. Keep the indexed task column as a UUID. - Exercise the real source-access service against PostgreSQL. Verify complete source results, malformed and uppercase input behavior, and rows examined by the plan. - Document the second source-validation query and its regression coverage. ## Verification - Red: the new regression failed because the source lookup examined 1,202 rows for two sources. - Green: four focused workspace suites passed, 147 tests total. The final regression also checks malformed and uppercase query inputs. - Live read-only comparison: two warmups, then five samples per variant in alternating order. Median client query time changed from 4.88 ms to 0.35 ms. Complete result rows matched. Shared buffer hits changed from 3,984 to 5. These measurements cover this SQL statement, not total agent startup. - The complete source-access helper also passed for the same retained reader in read-only transactions. Its median changed from 15.75 ms to 10.75 ms; repository admission still repeats other checks. - `pnpm -r typecheck` and `pnpm build` passed locally. The staged Linux build and all seven final regression cases passed on Node 24.20.0. - All 55 current-head checks/statuses passed; two Storybook checks were skipped. Greptile reviewed `6cfb755` at 5/5 with no findings. - The full local test run encountered a tracing-test failure in `native-session-executor.test.ts`. Both that test alone and the complete file passed on rerun (698 tests). The remaining full-suite run is still in progress. ## Risks - This changes SQL planning on an authorization path. The canonical guard preserves the former exact lowercase text match and avoids UUID parse errors. - Company filters, missing-source checks, project checks, and per-source access decisions remain in place. - No schema migration or new index is required. Repeated checks across large repository histories remain a separate source of startup work. ## Model Used - OpenAI Codex, GPT-6 family, with reasoning, shell tools, code execution, and browser verification. The exact model ID and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
|
445feaa7aa |
fix(server): index retained workspace task authorization (#16334)
## Thinking Path > - Paperclip manages AI agents and their work. > - Before an agent starts, repository admission checks access to retained workspace files. > - Admission holds a company provenance lock while it checks each source and reader. > - The retained-task query cast the indexed task ID to text. PostgreSQL could evaluate privacy across company history before it matched one source ID. > - Repeated slow checks kept the lock for hours and blocked other agent launches. > - This change looks up the canonical source UUID through the existing primary key before it checks privacy. > - The query does less work and keeps the same access decisions. ## Linked Issues or Issue Description **What happened?** Nine runs appeared active but had no provider process or log file. Read-only database inspection found a transaction holding the company repository-provenance lock for more than ten hours. Eight other transactions waited for that lock. The owner repeatedly ran workspace authorization queries. The company had about 13,400 tasks and 8,500 workspaces. **Expected behavior** A retained-source check should find the referenced task before it evaluates that task's privacy. Unrelated task history should not multiply the privacy work for every source and reader. **Steps to reproduce** 1. Run the new `workspace-authorization-query.test.ts` against authorization code from `5c7a025032`. 2. The real PostgreSQL fixture has 1,200 unrelated tasks and one retained source. The regression fails with 2,402 recursive privacy traversals, above the bound of 100. The other five access tests pass. 3. Apply this change and run the same test. All six tests pass. Related: Refs #16330 adds workspace timing evidence. This PR fixes a measured SQL plan. It does not change those tracing boundaries. ## What Changed - Compare the UUID task column with a guarded canonical UUID from the retained-source JSON key. - Reuse `canonicalExecutionUuid`. Invalid and noncanonical keys still match nothing and cannot cause a UUID parse error. - Add real PostgreSQL coverage for query work, missing and foreign sources, malformed and uppercase IDs, both agent and sponsor grants, and grant revocation. - Add a reproducible baseline comparison and document its scope in `doc/DATABASE.md`. ## Verification - Red: the unchanged query fails the new work-bound regression. Five access cases pass. - Green: 101 tests pass across the new query suite, workspace binding, and the production privacy review suite. - Full `pnpm -r typecheck` and `pnpm build`: pass. Dependencies use the repository's pinned pnpm 9.15.4. - All current-head CI checks pass, including the full server, chat, workspace, serialized, Runner, and eight E2E test lanes. Build, typecheck, canary, and security checks pass. Head: `ad907f6e14c2d773fa8c20692e5ccc10215c9297`. - Greptile: 5/5 on that head, with no actionable findings or unresolved review threads. The branch is mergeable. - The local full `pnpm test:run` was started, then stopped after a concurrent disposable-database check hit the macOS shared-memory limit. This is not counted as a local full-suite pass. The benchmark passed when rerun alone; the complete suite passed in CI. - `git diff --check`: pass. The branch has no lockfile or workflow changes. Synthetic SQL comparison on PostgreSQL 18.1, with 13,429 tasks and one retained source: | Query | Median | Five measured samples | Recursive privacy traversals | | --- | --- | --- | --- | | Baseline `5c7a025032` | 42.57 ms | 42.57, 47.71, 44.51, 41.29, 41.44 ms | 26,860 | | Fixed | 2.37 ms | 2.76, 2.35, 2.37, 2.11, 3.33 ms | 4 | Both versions return identical complete rows. The benchmark alternates variants after two warmup rounds. It loads the baseline authorization module with current dependencies; the UUID helper is unchanged. The measured gain is about 18x for this SQL fixture. The final committed benchmark also passed a second isolated run: 55.44 ms baseline and 3.26 ms fixed, with identical complete rows (about 17x). Two read-only queries on the affected database also returned identical complete rows. One changed from 129 ms to 7 ms; a workspace with 49 retained sources changed from 576 ms to 11 ms. These are single paired measurements, not endpoint or startup benchmarks. Reproduce: ```sh pnpm exec vitest run server/src/__tests__/workspace-authorization-query.test.ts server/src/__tests__/task-workspace-binding.test.ts server/src/__tests__/privacy-production-review.test.ts pnpm --filter @paperclipai/server exec tsx ../scripts/benchmark-workspace-authorization.ts --baseline-ref=5c7a025032 pnpm -r typecheck pnpm test:run pnpm build ``` ## Risks - A direct UUID cast could broaden or break access for malformed keys. The existing canonical guard and regression cases preserve the former text-match behavior. - Planner choices can differ across PostgreSQL versions and data sets. The regression bounds real privacy work rather than elapsed time or one exact plan shape. - Admission still checks every retained source and reader under its existing lock. This removes a measured query cost; it does not claim a bound for the full admission process. - No schema migration, permission change, lock removal, or live deployment is included. Recovery of the affected runs remains unverified until rollout. ## Model Used OpenAI GPT-6 through Codex, with tool use and code execution. The exact served model variant and context-window size are not exposed to this task. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
|
bd64eb27b0 |
perf(recovery): use indexed execution identity lookups (#16291)
## Thinking Path > - Paperclip manages AI agents and their execution. > - Recovery must keep old execution ownership visible before new work starts. > - Ownership reads filter large run contexts through a combined text expression. > - Recovery and status delivery also cast indexed UUID columns to text. > - These reads can scan history before finding the requested execution. > - This pull request preserves identity and ownership rules while using existing indexes. > - The benefit is less database work during recovery and task polling. ## Linked Issues or Issue Description Refs #14406. Related community report: #15275. This is an independent implementation. It does not use that pull request's code or commits. It covers the reported execution joins and the additional ownership query hotspot. **What happened?** Accumulated staging query statistics showed 11,782 ownership reads at 51 ms each. A paired recovery-action read averaged 22 ms. Both queried large run JSON. Text casts also prevented indexed UUID lookups in recovery and status delivery. **What did you expect to happen?** Recovery must find the same execution evidence through existing indexes. Malformed identifiers must match nothing without a cast error. Native issue bindings must retain precedence. Missing termination evidence must continue to block new work. **Steps to reproduce** Run the disposable benchmark below. It loads the original service modules from the baseline revision. It compares their exact ownership, blocker action and status-delivery SQL with the current modules on 1,400 synthetic runs, 350 historical recovery actions and 192 KiB contexts. ## What Changed - Convert saved text to UUID only after checking its canonical lowercase form. - Keep indexed run and task UUID columns unchanged in execution joins. - Split native and legacy issue predicates so existing indexes can filter ownership candidates. - Preserve company scope, native precedence, process and lease holds, recovery eligibility and delivery receipts. - Add real PostgreSQL identity and ownership regressions, a reproducible benchmark and database documentation. ## Verification - Local service SQL benchmark: ownership 78.30 ms to 1.14 ms, with the same two complete rows. Blocker action read 76.94 ms to 22.55 ms, with the same complete row. These are synthetic SQL timings, excluding process probes, provider calls and HTTP. - Status delivery returned the same 100 rows. Timing was neutral on the small-task fixture: 7.85 ms before and 8.30 ms after. No speedup is claimed for that case. - 231 local tests passed across six server suites. They cover malformed identifiers, canonical spelling, company scope, native precedence, retained processes, workspace restore, native replacement, conversations and delivery. - `pnpm -r typecheck` and `pnpm build` passed. - `git diff --check` passed. - All current-head CI and security checks passed, including the full general and serialized suites, browser shards, Runner verification and build. Greptile reviewed the exact commit at 5/5 with no actionable findings. - The older full local sweep in the companion worktree was stopped after final-commit complete CI passed. It is not claimed as a completed local pass. The 231 focused tests above passed locally on this branch. ```sh pnpm --filter @paperclipai/server exec vitest run src/services/conversation-continuation.test.ts src/services/legacy-execution-recovery.test.ts src/__tests__/legacy-workspace-restore-recovery.test.ts src/__tests__/chat-completion-delivery.test.ts src/__tests__/agent-conversations.test.ts src/services/native-runtime/native-safe-replacement.test.ts pnpm --filter @paperclipai/server exec tsx ../scripts/benchmark-recovery-queries.ts --baseline-ref=1e731520bb ``` ## Risks - PostgreSQL accepts more UUID spellings than the old text joins. The explicit guard preserves the old lowercase spelling requirement. - Query plans depend on the data distribution. Small task sets can show neutral status-delivery timing. The benchmark is not a production latency claim. - Recovery ownership checks remain conservative. Process, lease, workspace and no-replay rules are unchanged. - No migration, new index, cache, cleanup change or lock removal is included. ## Model Used OpenAI GPT-6 through Codex, with reasoning, repository inspection, shell tools and local code execution. The runtime does not expose a more specific backend model ID or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
|
ebeac833a6 |
perf(runs): bound history and reduce repeated context reads (#16286)
## Thinking Path > - Paperclip helps operators manage AI agents and inspect their work. > - Run history supplies recent execution records to the board and API clients. > - The list repeats eight reads of a large stored JSON context. > - A caller can also omit the limit and read the complete history. > - This pull request expands context fields once and bounds every list read. > - The benefit is lower database cost and bounded redaction work. ## Linked Issues or Issue Description Refs #958. Related community reports: #13962 and #10631. This is an independent implementation. It does not use their commits or code. It covers the history bounds reported in both. Process memory monitoring from #10631 is outside this change. **What happened?** The run-history query repeatedly extracts fields from large context JSON. Requests without a limit also load every historical run before authorization and redaction. Accumulated staging query statistics showed 271 ms for summary history and another 58 ms for its redaction lookup. **What did you expect to happen?** Normal reads must use a bounded recent history. Context projection must preserve the existing values and privacy behavior with less repeated database work. **Steps to reproduce** Run the disposable benchmark below against the baseline revision. It creates 1,400 synthetic runs with 192 KiB contexts. It compares the exact service SQL and every returned column for both summary and full history. ## What Changed - Expand context fields with one lateral record projection. Preserve non-object legacy contexts and the first-class issue binding. - Enforce a 200-row default and a 1,000-row maximum in the route and service. - Apply the default in the shared UI client, including both agent detail implementations. - Preserve response arrays, authorization, result projection and secret redaction. - Fetch older linked runs by ID in both agent pages. Check company and agent scope, navigation races and visible retry errors. - Update OpenAPI, data-path documentation and capability maps. - Add real PostgreSQL and HTTP regressions plus a reproducible benchmark. ## Verification - Local benchmark: summary history 37.72 ms to 19.34 ms; full history 37.84 ms to 19.01 ms. All 200 complete positional rows match in each comparison. These are synthetic local SQL timings, excluding HTTP and redaction. - History, route, privacy and redaction suites: 160 server tests passed across six files. Twenty-two UI API, selection, run-panel and log-visibility tests passed. Both agent-page variants render an older linked run with an empty history page on desktop and mobile. - `pnpm -r typecheck` and `pnpm build` passed. - Map validation and `git diff --check` passed. - All current-head CI and security checks passed, including the full general and serialized suites, browser shards, Runner verification and build. Greptile reviewed the exact commit at 5/5 with no remaining findings. - The full local sweep began before the final compatibility fixes. It was stopped after the final commits passed complete CI. The focused local suites listed above passed on the final code. Before interruption, the broader local sweep passed 31,743 tests across the general server, UI and several package groups, with no reported failures. The full local command is not claimed as a completed pass. ```sh pnpm --filter @paperclipai/server exec vitest run src/services/heartbeat/run-state.test.ts src/__tests__/heartbeat-list.test.ts src/__tests__/agent-live-run-routes.test.ts src/__tests__/run-secret-redaction.test.ts src/__tests__/heartbeat-run-privacy-routes.test.ts pnpm --filter @paperclipai/ui exec vitest run src/api/heartbeats.test.ts pnpm --filter @paperclipai/server exec tsx ../scripts/benchmark-run-history.ts --baseline-ref=1e731520bb ``` ## Risks - Clients that relied on an unbounded array now receive 200 rows by default. Explicit limits allow up to 1,000. This change does not add pagination. - Legacy context conversion must stay identical. Real database regressions cover null, array, scalar, nested values and native issue precedence. - No schema migration or persistent cache is introduced. Redaction and access checks remain active. ## Model Used OpenAI GPT-6 through Codex, with reasoning, repository inspection, shell tools and local code execution. The runtime does not expose a more specific backend model ID or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
|
df4ee06e2f |
feat(skills): select and validate tracked GitHub branches (#16288)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Skills can track a branch in an authorized GitHub repository. > - Sources previously offered only a default-branch repair action. > - People need to select a listed branch or enter a branch that GitHub has not listed. > - The server must validate the selected ref with the caller's authorized connection. > - This pull request connects the approved branch picker to production APIs. > - Installed skills remain usable while the source changes its tracked ref. ## Linked Issues or Issue Description **Subsystem affected** Skills UI, shared API contracts, GitHub source services, and agent API discovery. **Problem or motivation** The default-branch repair action does not let people choose another branch. The settings service also validates the old ref when a caller supplies a new ref other than HEAD. A missing tracked branch can prevent connection repair even when the selected account has repository access. **Proposed solution** Load a bounded branch list with the authorized connection. Mark the default branch. Search listed branches or accept a typed ref. Validate the selected ref before saving. Keep the chosen value after a load error, invalid ref, or concurrent update. Save the selected connection and branch together during connection repair. **Alternatives considered** A default-branch button does not support a named branch. A text field alone does not help people find the repository default or available branches. **Roadmap alignment** This improves the existing Skills source manager. It does not add a new skill import system. **Additional context** Refs #16066 and #16256. This is the production implementation of the approved branch-selection Storybook journeys. ## What Changed - Add an authorized branch-list endpoint and shared response/query types. Register it in agent API discovery. - Validate the requested ref, including the returned commit SHA. Preserve source leases, revision checks, project ownership, skill identities, selections, and installed versions. - Add the searchable branch picker to Sources and connection repair. Allow typed refs during branch discovery and after discovery fails. - Keep save errors in the dialog. Retain the selected branch through a concurrent source update. - Use the production components and API client in Storybook. Add keyboard, touch, loading, retry, invalid-ref, connection-repair, and concurrent-update browser journeys. - Update product documentation and the feature/access maps. ## Verification - Red/green: two new database regressions fail against the previous service and pass against the implementation. - Linux database/service suite: 85 tests passed. This includes source visibility, human/agent authorization, selected connections, immutable versions, and invalid refs. - Rebased branch and review fixes: 94 focused UI, route, branch-validation, and fixture tests passed. Two conflict-message regressions and the stale-retry fixture regression fail before the fix and pass after it. - Storybook build passed. All 26 focused browser journeys passed. - Repository typecheck and build passed. Final UI typecheck passed after the review fixes. - The full local Vitest run was interrupted when the checkout and its dependencies disappeared. It reported missing working-directory/Postgres files and worker startup errors. Its two timed-out tests pass after the checkout was restored. The complete CI suite passed on the final head, `cf5d4c8f0a`: [CI run](https://github.com/paperclipai/paperclip/actions/runs/38571068332). One unchanged workspace timestamp test required a single rerun. Its release-minus-one-millisecond value can equal the original confirmation time. The rerun passed. - Live acceptance passed on implementation head `5dd935bf14` in an isolated macOS arm64 instance with Node 24.21.0 and an authorized private GitHub repository. The UI loaded the actual default branch, saved branch and selected connection together, and preserved the installed skill/version IDs after reload. An invalid typed ref retained the draft and showed the provider error. A valid typed HEAD ref then saved successfully. The owned runtime and database were stopped after the test. Focused unit, Linux database, and browser suites passed again after the error-handling review fixes. - Greptile reviewed final head `cf5d4c8f0a` at 5/5. Both review threads are resolved; the fresh review has no remaining findings. - Token gates and map/catalog checks passed. - Review entry points: `Skills / Project repository skills / 03 Branch selection components` and `04 Branch selection journeys`. Run `pnpm storybook` to inspect them. - Browser command: `pnpm exec playwright test --config tests/storybook-visual/playwright.config.ts tests/storybook-visual/skill-source-branch-selection.spec.ts tests/storybook-visual/project-repository-skills.spec.ts`. - Manual check: open an independent GitHub source, choose a new branch, select the default or type a ref, save, and reload. Try an invalid ref and confirm the selection remains in the dialog. For a project-bound source, change its ref in project settings. ## Risks - GitHub discovery is bounded to 100 listed branches. The default branch is always included. Typed refs remain available. - A source can change while the dialog is open. The API rejects a stale revision and the UI keeps the draft for retry. - A ref change schedules the existing refresh pipeline. Installed versions remain available until a successful refresh imports new content. - No database migration or credential storage change is required. Existing HEAD requests remain supported. ## Model Used OpenAI Codex, GPT-6 family. The serving model's exact identifier and context-window size are not exposed in this session. Used reasoning, repository tools, code execution, and browser tools. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
|
e9b6c4d44c |
perf: remove history scans from task and chat queries (#16278)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Task reads and external chat notices must remain responsive as run history grows. > - The chat notice sweep casts indexed UUID columns to text. > - Run redaction and task provenance filter large JSON contexts with expressions that lack matching indexes. > - These queries scan history and read large stored contexts on common requests. > - This pull request adapts two existing fixes to current master and adds the missing provenance index. > - The benefit is less database work with the same query results and access rules. ## Linked Issues or Issue Description Refs #15927. This change adapts that chat sweep fix to the extracted inbound notice module and retains the contributor credit. Refs #12499. This change adds that missing nested-context index through a current, concurrent migration. It retains the contributor credit. This combined change replaces those older layouts for the measured query paths. It also covers task creation provenance, which those pull requests do not address. **What happened?** The chat notice sweep scans wakeup history. Issue redaction scans run contexts because only one branch of its JSON condition has an index. The task creation-source filter also scans contexts because its native and legacy ID expression lacks an index. **Expected behavior** The queries use indexed lookups and return the same rows. Company access, task origin precedence, secret redaction, and chat notice ordering remain the same. **Steps to reproduce** Run `pnpm --filter @paperclipai/server exec tsx ../scripts/benchmark-slow-queries.ts --baseline-ref=f8af817f8d`. The benchmark creates disposable PostgreSQL data and compares the old query with the current query on the same fixture. ## What Changed - Compare chat UUID columns directly with safely parsed payload IDs. Reject malformed and noncanonical IDs without a cast failure. - Add the nested `paperclipIssue.id` run-context index and the exact native/legacy task-provenance expression index. - Build both indexes concurrently. Register the migration for top-level execution and invalid-index retry repair. - Extend chat payload and migration regression coverage. - Add a repeatable synthetic SQL benchmark and document its scope and command. - Keep the five newest schema snapshots. ## Verification - Focused local checks: 76 selected tests passed in five files. These cover FIFO notices, malformed IDs, conversation state, redaction, provenance, and company boundaries. - Disposable PostgreSQL 18.1 fixture: 335 tasks, 1,400 runs, 13,000 wakeups, 377 actions, and 192 KiB synthetic contexts. - Five warm samples per query, after two warmups. Every returned SQL column matched before and after, compared as positional tuples so duplicate unnamed projections are retained. | Query | Before, median | After, median | Improvement | | --- | ---: | ---: | ---: | | Chat notice candidates | 26.21 ms | 6.43 ms | 4.1× | | Task creation-source list | 159.69 ms | 6.51 ms | 24.5× | | Issue redaction contexts | 131.88 ms | 0.34 ms | 389.1× | The run-history context projection returned the same 200 rows and kept the same index plan and buffer counts. Its timings were noisy (37.30 ms before and 56.78 ms after in the last run; 34.25 ms and 34.14 ms in the previous run). No improvement is claimed for this control. Its repeated JSON projection remains a separate optimization opportunity. The populated plans use the wakeup primary key, the provenance expression index, and a BitmapOr over both redaction indexes. These are local SQL measurements. They do not prove an equivalent change in hosted API latency. - `pnpm -r typecheck` and `pnpm build` passed locally. - The full local `pnpm test:run` was started and then interrupted (exit 130) when the Mac reached its PostgreSQL shared-memory limit. It did not complete and is not reported as passed. The final SQL benchmark passed after its disposable database resources were released. The full general and serialized test suites passed in CI. - All CI checks for final head `193acca6abaa992acad12f4b631bd31dd3234641` passed, including full Vitest coverage, E2E checks, typecheck, build, migration order, and lifecycle boundaries. - Greptile reviewed that exact head at 5/5 with no actionable comments. ## Risks - Both indexes add storage and write cost. Initial builds read stored run contexts and can take time on large histories. - Concurrent index builds avoid holding a write-blocking table lock for the whole build. The existing migration retry path removes invalid partial indexes before retrying. - The chat parser accepts only canonical lowercase UUID text. This preserves the prior text comparison, including rejection of uppercase and malformed values. - Staging has not been migrated or deployed. Local PostgreSQL and synthetic data do not reproduce hosted load or network latency. ## Model Used - OpenAI Codex, based on GPT-6. The exact serving model ID and context window were not exposed in this session. Used reasoning, repository tools, browser inspection, and local code execution. The adapted fixes retain their original contributor credits. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
|
c36281d639 |
fix(skills): repair missing branches and show grouped import progress (#16256)
## Thinking Path > - Paperclip lets people manage AI agents and their reusable skills. > - GitHub skill sources must keep their installed content usable during updates. > - A source can track a branch that no longer exists. > - The UI treats that GitHub error as a connection problem, so saving a valid account does not resolve it. > - Project workspaces also show the same repository several times, and long imports give little feedback. > - This pull request adds explicit branch repair, groups repository imports, and shows import progress. > - People can repair the actual problem and see when their import is working. ## Linked Issues or Issue Description Refs #16066 and #14713. This fixes the Sources experience introduced by those changes. Related adapter-source PRs #14340 and #14341 cover runtime mounting, not this source-management flow. No overlapping source-management fix was found. **What happened?** An installed source tracked `main` while its GitHub repository used `master`. GitHub returned HTTP 422. The UI showed a general read error and asked for a new connection after a valid account was saved. The project repository list repeated the same repository/ref for each project. Import had no spinner or explanation of queued work. **Expected behavior** Identify an unavailable branch and offer an explicit repair. Retain the selected connection and installed versions. Show one repository/ref row with its projects. Give immediate feedback and show the queued and active import states. **Steps to reproduce** 1. Install a source with an immutable commit and a saved tracked branch that does not exist. 2. Refresh it, or try to save a valid GitHub connection. 3. Add the same repository/ref to two legacy project workspaces and open Sources. 4. Import that repository and observe the row until installation completes. ## What Changed - Distinguish a missing GitHub revision from access denial and temporary read errors. - Validate both repository identity and the tracked revision when saving a connection. - Offer Use default branch on independent sources and in connection repair. Keep `HEAD` as the default-branch alias after refresh. Preserve skill IDs, versions and selections. - Keep active project refs under project configuration. Reject source-level changes that would alter their tracking. Recheck the ref under the source lock when project attachment races with branch repair. - Group matching repository/ref workspaces. Adopt eligible workspaces and skip pending workspaces. Keep remaining project links inside the existing source card. Allow remaining imports while another workspace is pending. - Show a spinner, busy state and queued/importing text. Keep the saved authorized account selected in connection repair. - Update shared contracts, feature/access maps, database notes and production-component Storybook journeys. ## Verification - Red/green: three local regressions failed on the original code: missing-ref classification, duplicate repository rows, and branch repair instead of another connection prompt. The changed UI/reader tests pass after the fixes. - Live local app with a real authorized GitHub credential: reproduced HTTP 422 for the unavailable branch; used the UI to restore default-branch tracking; confirmed the same connection, skill ID and single immutable version remained. - Live local grouped Paperclip import: one source, two project associations and 52 installed skills. Sources survived reload. No staging data was changed. - All 16 project repository Storybook browser journeys pass on the final head, including keyboard focus recovery after branch repair. These include branch repair, grouped imports, connection selection, recovery, removal and responsive layouts. - Repository typecheck, production build, Storybook build, token gates and 28 map/catalog tests passed. Final UI typecheck and build also passed after grouping remaining project links. - Linux qualification: all 94 focused source, project import, GitHub reader and UI tests pass with supported Node 24. No database tests were skipped. Both review findings failed before their fixes and pass after them. - The full local `pnpm test:run` attempt was stopped after macOS database suites exhausted the host shared-memory limit. The complete Linux CI matrix is the full-suite gate. The complete Linux CI matrix passes for head `f886e3ac073ec1c6f051fd6429496234f5143694`. - Greptile rates head `f886e3ac073ec1c6f051fd6429496234f5143694` 5/5. Both findings are fixed and all review threads are resolved. - Storybook: `skills-project-repository-skills-02-journeys--missing-branch` and `--duplicate-projects`. ## Risks - Default-branch repair changes the tracked branch only after an explicit user action. Existing execution version pins stay intact. - A selected connection now needs access to the tracked revision, not only repository metadata. - Grouping is by repository and ref. Project access and provenance remain separate and are checked by the existing services. - Legacy source errors contain safe text. The repair-action classifier maps known errors and treats other failures as retryable. No credentials or provider response bodies are returned. - No schema migration, workflow change, lockfile change or staging deployment. ## Model Used OpenAI Codex, GPT-6 family. The exact serving model identifier and context-window size are not exposed in this session. Tool-assisted implementation, code execution and browser verification. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
|
473c80d13f |
Automatically import and update project repository skills (#16066)
Automatically import skills from new GitHub project repositories and update enabled sources in the background. Preserve project-derived access, saved selections, immutable execution versions and explicit pins; add legacy adoption, refresh and connection repair in Sources. Include durable scheduling and bounded work credits, production Storybook journeys, real GitHub-to-routine acceptance receipts and final-head CI/security/Greptile qualification. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
db65a0863e |
Deliver durable resource lifecycle events to plugins without polling (#16203)
## Thinking Path > - Paperclip manages AI agents and their work. > - Plugins keep external resources aligned with Paperclip projects and agents. > - The durable resource journal stores changes, but its plugin interface requires polling. > - Project deletion has no journal entry, so consumers must scan for missing projects. > - This PR delivers committed journal events through a native plugin callback and records deletion. > - Plugins can recover unfinished work without periodic change scans. ## Linked Issues or Issue Description Related: #15343 introduced the durable inbox. #15631 added required agent lifecycle participation. This change keeps both contracts and adds automatic delivery for the resource inbox. **What happened?** Plugins must schedule reads of the durable inbox. A deleted project has no durable deletion event. Consumers must scan saved bindings to detect its removal. **Expected behavior** Core should deliver committed resource events and replay unfinished work. Empty queues should have no polling timer. Project removal should leave a durable event. **Steps to reproduce** 1. Install a plugin that consumes project lifecycle events. 2. Create or update a project. The plugin must call `listLifecycle` to discover it. 3. Delete the project. The journal has no deletion entry. ## What Changed - Add `resourceLifecycle` to the manifest and `onResourceLifecycle` to the SDK. Require `events.subscribe` and a configured, enabled company scope. - Reuse transaction-aware work signals and the delivery coordinator. Wake after commit, on startup and plugin activation, and after configuration changes. - Acknowledge only a matching successful result. Retry unfinished or interrupted work. Retain deferred events without an idle retry timer. - Wake again after successful worker configuration application, and retain failed scans through idle drain (both Apex findings fixed). - Keep ordering per resource and deliver past failed or deferred resources. Keep the manual inbox methods for existing consumers. - Record project deletion in the removal transaction. Extend the journal constraint with a generated migration. ## Verification - Apex follow-up: 129 focused worker, delivery, coordinator, and application tests passed; server typecheck passed. Regression coverage verifies configuration-application races and failed scans across idle drain. - Focused lifecycle, transaction coordinator, manifest, and SDK dispatch suites: 105 tests passed, including single-connection saves, redacted failure diagnostics, wakeups retained during idle drain, and per-event retry deadlines. - Complete SDK suite plus delivery database tests: 128 tests passed. - Shared, database, and SDK typechecks passed. Direct server `tsc --noEmit` passed against rebuilt SDK declarations. - Full local `pnpm test:run` finished with 19,491 passed, 148 skipped, and 6 failed tests across 5 files (plus two suite setup errors). This run overlapped branch updates and is not final-head evidence: failures included missing Cargo, local Git default-branch assumptions, and stale in-process lifecycle modules. Final Apex-fix commit `75d028788` passed all CI gates, including the full test shards, and received Apex 5/5 with no unresolved comments. - `pnpm -r typecheck` and `pnpm build` were attempted. Both stopped because Cargo is unavailable locally. CI supplies the Rust toolchain. - Local installation used the repository's documented lockfile fallback because master has dependencies missing from its lockfile. No dependency changes are included here. ## Risks - Delivery is at least once. Plugins must re-read current state and make external effects idempotent. - Signals are process-local, like the other delivery queues. Startup recovers committed rows. Independent database writers or multiple active server processes require an explicit ownership and wake protocol. - Apply migration `0340_open_warlock.sql` before running code that records project deletion. Earlier deletions cannot be reconstructed. - Automatic delivery selects plugins with company configuration rows. `deferred` waits for a later startup, configuration change, or other work notification. - This does not replace required agent lifecycle participation or establish that external mounts are unused. ## Model Used OpenAI Codex (GPT-6), with tool-assisted code editing, code inspection, and test execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [ ] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
|
f329b24ee1 |
feat: give tasks durable project-optional workspaces (#15749)
Give tasks durable company-scoped workspace bindings independent of project assignment, channel defaults and authorized repository preparation. Reuse verified input seeds and sparse output recovery while preserving trust, privacy and controller provisioning boundaries.
Full CI and E2E, Superagent, legacy checks and Greptile Apex 5/5 passed on reviewed head
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DottaandPaperclip
|
f0e12c8519 |
Add managed Slack setup with an independent own-app path (#15679)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Slack connects a person to an agent through an installed app and a verified identity. > - Independent installations must remain usable without Paperclip Cloud or manager credentials. > - Approved Cloud deployments can use Slack manager grants to create and install each agent's app. > - Both paths should share credential storage, identity checks, recovery, and the existing runtime. > - This pull request adds gated managed setup and keeps independent app setup under Advanced. > - It also makes ongoing connection settings and personal test messages easier to use. ## Linked Issues or Issue Description **Subsystem affected** Slack setup, connection settings, tenant credential storage, and the Cloud connector handoff. **Problem or motivation** Approved deployments need an installation flow without pasted configuration tokens. Open-source users must retain their independent Slack app flow. A connection manager also needs a simple way to check a bot from Settings. **Proposed solution** Use the managed path when the instance is configured to support it. Choose agent and Connect are the two visible stops. Continue starts authorization or installation. Use your own app remains under Advanced before creation. Save personal manager grants by company, Paperclip user, Slack user, workspace, and manager app. Reuse only verified identities for test messages. Unknown identities must complete a private Slack connection challenge before linking and receiving the test DM. **Alternatives considered** A shared bot would change each agent's Slack identity. Requiring Slack CLI or a hosted service for self-hosted users would remove independent installation. **Roadmap alignment** This maintainer-requested change improves Connected Apps and experimental Agent Chat. It adds provisioning and management controls to the existing Slack runtime. **Additional context** The companion Cloud broker profile is a separate deployment prerequisite. Managed setup remains gated. Existing-app adoption is deferred. ## What Changed - Extract Slack registration, provider requests, completion, customer-owned setup, managed setup, and personal manager grants into focused services. Preserve the compatibility facade and independent removal cleanup. - Add company-scoped manager grants and a registration reference through an additive, idempotent migration after current master. Keep runtime credentials separate from app-registration secrets. - Add authenticated manager authorization, sealed handoff, serialized refresh and revocation, app creation, managed installation, and installer-bound OAuth fallback. - Preserve creation intent, block automatic uncertain recreation, save credentials before downstream checks, and validate app, workspace, bot, scopes, and installer identity. - Add the two-stop production wizard and ordered stories. Keep the own-app, manual, existing-app, and legacy-draft paths. - Simplify Settings. Open Slack configuration targets the saved app. The test-message action has its own row. Remove the old manual-avatar section, channel-message section, and broken permissions link. - Add paginated account discovery and a private connection challenge for unknown accounts. Expired invitations stop waiting and offer a new private invitation. Save send receipts before provider dispatch and preserve confirmed delivery when activity logging fails. - Reinstall the saved managed app on explicit reconnect, replace revoked credentials, and resume completion. Persist reconnect intent and duplicate-request receipts without creating another app. - Update provider browser tests, recovery tests, secret redaction, setup documentation, and the agent prompt. Preserve current master's durable verification scheduling. ## Verification - Full workspace typecheck and repository build passed on `56d389d47a`. The subsequent reconnect retry fix in `288364eada` also passed UI typecheck and UI build. - 114 focused Slack registration cases and 13 production managed-wizard cases passed, including fresh-token reconnect, retry after installation failure, and duplicate reconnect requests. - All nine affected Slack browser cases passed against the production UI and a disposable fixture server. They cover managed setup, automatic setup, own-app selection, refresh, recovery, mobile behavior, and connection settings. - Eight focused real-database test-message cases passed. They cover a private ownership challenge, saved grant reuse, account pagination, revoked and conflicting links, workspace mismatch, disabled DMs, revoked membership, audit failure, ambiguous dispatch, and secret canaries. - UI token gates and the production Storybook build passed. - Greptile reviewed exact head `288364eada5d9c114fad991ff634612639d06672` at 5/5 with no actionable findings or unresolved review threads. - The full repository test suite and current-head CI are running. Their final results will replace this line before merge. - Earlier live feature previews created two bots in the authorized Paperclip Slack workspace and reused one personal manager grant. Local managed Continue created and installed a bot without a configuration token or a separate Add to Slack action. Avatars, welcome DMs, signed callbacks, and direct replies were observed. A Settings test DM also arrived in the signed-in user's Slack account. - Earlier staging thread qualification required manual publication recovery for one bot. Current-head live qualification remains required before enabling the production default. Fixture results do not establish Slack approval behavior in other workspaces. ## Risks - Personal manager tokens can create apps. They stay in scoped vault entries. The manager client secret stays at the broker. Company, actor/session, origin, and app identity checks apply throughout setup. - The additive migration must also work on qualification instances that applied earlier branch migrations. Table, column, index, and constraint creation is idempotent. - Creation and message timeouts can leave uncertain outcomes. Saved request IDs prevent automatic duplicate dispatch. - Unknown Slack identities must receive and complete their private challenge while signed in. Account selection alone does not grant Paperclip permissions. Existing revoked or conflicting links are not overwritten. - A development-only manager transport uses an explicitly configured private credential file for local qualification. Production ignores this transport; no manager credentials are bundled with open source. - Managed rollout requires Slack approval, the companion broker deployment, configured secrets, and final live qualification. Removing a connection does not delete its Slack app. ## Model Used OpenAI Codex, GPT-6 family, with reasoning, code execution, and browser tools. The session does not expose the exact serving model ID or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [ ] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Devin FoleyandPaperclip
|
b36960b758 |
fix(server): permit verified question-delivery history to sleep (#15851)
Treat completed question-response deliveries as history only after their exact same-company handoff finishes. Preserve missing evidence, retries, accounting debt, and idle-sleep fences. Add a concurrent all-state question history index with interrupted-build repair. Keep migrations serialized without waiting snapshots that deadlock concurrent index builds. Validated by 118 focused sleep tests, six migration/snapshot tests, full repository typecheck, all CI gates, and Apex 5/5. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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Devin FoleyandPaperclip
|
98e3cec78e |
feat(costs): report monthly subscriptions beside API spend (#15634)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Its Costs page reports API charges and subscription token usage. > - Subscription runs do not show the recurring fee paid for the account. > - Several agents can share one paid seat, so a fee per agent would overstate cost. > - This pull request identifies connected subscription accounts and reports each monthly fee once. > - Users can compare API spend and subscription costs, see uncertainty, and enter their actual price. ## Linked Issues or Issue Description Refs #498 and #3406 for related subscription reporting needs. This change does not add subscription budget enforcement or automatic optimization. Related prior approaches: #10544 and #11104 proposed API-equivalent token costs for subscription work. This PR reports recurring account fees separately from usage charges and budgets. A search found no open PR for monthly account fee reporting. **Subsystem affected** Costs, managed AI connections, shared contracts, database schema, and board UI. **Problem or motivation** An organization can pay for subscriptions even when included runs record no additional dollar charge. The Costs page cannot show that monthly commitment or distinguish a shared paid seat from several separate seats. **Proposed solution** Discover account identity from the managed connection selected for a run. Use exact known plans for labeled monthly list-price estimates. Keep ambiguous plans and unconfirmed identities unpriced until the user supplies a price. Sum current monthly fees separately from date-filtered API charges and token usage. **Alternatives considered** A fee per agent double-counts shared accounts. Token-based API price estimates do not measure the recurring subscription fee. Provider invoices would be more exact but are not available through these account credentials. **Roadmap alignment** Extends the shipped Better Budgeting and Personal & Shared AI Accounts capabilities. The feature and UI were reviewed with the maintainer before this PR. ## What Changed - Add company-scoped subscription accounts, connection bindings, and immutable price revisions in replay-safe migration 0322. - Identify OpenAI workspace/seat and Claude organization/account pairs only after provider authentication. Keep provisional records grant-scoped; unchecked ID-token claims cannot combine accounts or grant billing editors. Keep credentials and raw provider identities out of reports. - Attach the selected subscription to new run receipts. Resolve duplicate aliases without rewriting old monetary receipts. - Add cached background discovery with four provider checks and twenty discovery requests at a time. Accepted requests wait for capacity; excess requests receive HTTP 429 and a UI retry action. Preserve saved prices and observations when a provider check fails. Dashboard polls load current prices only; audit revisions stay in the database. - Support owner-controlled monthly or annual prices, fractional-cent precision, separate currency totals, tracking status, and duplicate linking. Preserve both personal owners and shared-account managers when discovery finds the same paid seat. - Show API spend beside monthly subscription commitment, with separate token totals and clear estimate labels. Account details and fee totals follow billing-owner/shared-audience visibility; company-wide token totals remain available to cost readers. - Use consistent amount and estimate badge formatting for agent, user, project, and model rows. - Add real PostgreSQL tests, route authorization tests, UI tests, interactive Storybook fixtures, and operator documentation. ## Verification - Current head `d7b5c78dadf5033a3c447d83434676ac94687e77` passed all 53 checks, with two checks skipped. This includes the full test matrix, browser tests, build, typecheck, migration policy, canary packaging, and security checks. - Greptile Apex reviewed that exact head at 5/5 with no unresolved findings. - Local `pnpm -r typecheck`, `pnpm build`, `pnpm check:token-gates`, migration safety checks, and `git diff --check` passed. - All 238 focused tests passed across accounting, subscription persistence, authorization, UI, migration replay, and snapshot drift. - The expanded local chat suite passed 1,149 tests. Two cases failed because this workspace found an unrelated ancestor skill directory; both passed unchanged in an isolated checkout. The full local Vitest command was not repeated after the rebase because of this environment issue. CI covered the complete test matrix on the final head. - Migration `0322_reflective_kree.sql` follows master's `0321_acoustic_human_fly.sql`. Its snapshot and journal were regenerated. Master's migration and snapshot are unchanged. The subscription SQL retains its original content and hash. - Disposable PostgreSQL upgrade fixtures applied master's added lifecycle and Slack migrations without changing saved subscription prices or cost receipts. The renamed subscription migration was recognized by hash, retained one history row, and a second migration run was a no-op. - Regression tests cover provider capacity, fractional-cent edits, billing visibility after grant revocation, and fixed-price/credit/unknown usage. The new UI billing-label tests fail against the old wording and pass with the fix. - Browser checks passed for desktop and mobile layouts, shared-account totals, annual price edits, unknown prices, and stale provider data. - A live OpenAI account probe returned HTTP 200 and a verified Pro account identity. The generic Pro plan correctly remains unpriced. - Live Claude discovery identified Max 20x and a $200/month estimate. Two real Claude agent runs were attributed to that same account, with two usage receipts, two agents, one monthly fee, and zero additional usage charges. Two OpenAI connections also deduplicated to one account. - Live Codex execution is not verified: both Paperclip's managed hello test and a direct host `codex exec` fail with a workspace-routing authentication error. The current credential passes the usage API probe. This is separate from the successful account-discovery check. - A local performance fixture with 50,000 usage events and 5,001 saved price revisions produced a 1,589-byte report in 11.5 ms median / 12.2 ms maximum over ten warmed runs. PostgreSQL used the subscription/revision index to read one current price row. These are local measurements, not a production latency guarantee. - [Desktop, account details, and mobile screenshots](https://pages.paperclip.ing/pr-15634-subscription-costs-d5d285e2/) show the production Costs page with synthetic Storybook fixtures. - To inspect the UI, run `pnpm storybook` and open **Costs / Subscriptions**. Edits there change fixture data only. ## Risks - Provider plan identifiers can change. Unknown plans remain unpriced. Automatic prices are estimates before tax; discounts and negotiated prices require a user-supplied amount. - Subscription fees describe the current monthly commitment. They do not follow the selected usage date range and do not consume agent budgets or create finance events. - Monthly fees cover only accounts visible to the viewer; company-wide token totals retain their existing scope. - Legacy or unmanaged usage can remain unattributed. Unconfirmed identities require manual prices and may need explicit duplicate linking after credential changes. - Disconnecting a connection does not prove provider billing stopped. Users must end or exclude tracking explicitly. - Migration 0322 adds tables, a nullable cost-event column, and an index. It is replay-safe, but normal migration locks still apply. ## Model Used OpenAI Codex, based on GPT-6. This session did not expose a more specific backend model ID or context-window size. Capabilities used: code editing, shell execution, database tests, and browser verification. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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|
DottaandPaperclip
|
835a022936 |
perf(server): wake delivery queues from transaction-aware work signals (#15625)
## Thinking Path > - Paperclip manages AI-agent work and its delivery to users and agents. > - Five delivery queues scan the database even when empty. > - Each queue already has durable rows; empty polling wastes idle hosting capacity. > - Producers can register intent inside their existing database transaction. > - Central transaction tracking can wake consumers after the outer commit without extra caller wrappers. > - A lost response needs reconciliation against PostgreSQL before an empty queue is safe to leave idle. > - This change uses one scheduler for outstanding work and lets settled, empty queues go quiet. ## Linked Issues or Issue Description Supersedes the closed #15614. Related idle-safety work: #15522 and #15599. **What existing behavior does this improve?** Delivery scheduling for feedback exports, chat completions, connection continuations, question answers, and tool-action receipts. **Current behavior** Feedback scans every five seconds. Four delivery queues scan on the heartbeat interval, normally 30 seconds. Startup and some event paths also scan them. **Proposed behavior** Each producer awaits one intent registration before its queue write. The existing `createDb` transaction boundary tracks nested savepoints and wakes the consumer after outer settlement. Startup scans restore durable work. Pending rows, failures, and unresolved transactions retain retry deadlines. Empty, settled queues have no timer or recurring scan. **Reason and benefit** Normal delivery starts after commit. Central tracking removes caller-specific post-commit plumbing. PostgreSQL transaction status resolves lost responses without new tables or a permanent uncertainty latch. **Breaking changes** No API or schema changes. The notification scope is one DB owner and its dedicated child pools. Direct SQL, separate roots, and other processes require an explicit wake/recovery integration. This path requires PostgreSQL 14+ transaction-information functions; embedded PostgreSQL uses 18. ## What Changed - Add one named-deadline scheduler and app-owned coordinator for five existing queues. - Instrument `createDb().transaction()` centrally, including nested savepoints. Dedicated child connections share their owner's signal scope. - Register work before the five queue insert paths. The first registration obtains the outer XID; unrelated transactions issue no extra SQL. Tool receipt insertion gains a small transaction around its existing insert. - Query `pg_xact_status` only for rejected, tracked transactions. Probe before scanning the queue. Retain the idle hold while PostgreSQL still reports an in-progress transaction or the probe fails. Release it after settlement and reconciliation. - Remove unconditional delivery recovery scans and caller-specific completion post-commit actions. Retain the existing task-scoped completion activity fast path and durable claims. - Coalesce wakes without postponing an earlier deadline. Retry outstanding rows and failures; suppress dispatch during idle drain while allowing transaction and queue reconciliation; suppress both during warm standby. Cancel deadlines and await active delivery sweeps on shutdown. - Serialize feedback flushes. Vote routes return after saving. Uploads have a 30-second deadline and shutdown cancellation; unfinished exports remain recoverable. - Document the writer contract and update the dated sleep inventory. ## Verification - Final head: `a4609956841107ad60c4cb50fe2acb05636b1363`. - Passed: all final-head hosted checks, with 54 successes and two intentional skips. The full test matrix, typecheck, build, canary, and aggregate verification passed in [run 37940948440](https://github.com/paperclipai/paperclip/actions/runs/37940948440). - Passed: Greptile 5/5 on the same head, with a successful check run and zero unresolved review threads. The branch is mergeable. - Passed locally after the final rebase: 50 coordinator, scheduler, and startup tests; server typecheck; server build. - Passed locally before the final import-only rebase: repo-wide typecheck and build; 237 PostgreSQL producer/delivery and database signal tests; feedback, native-question, and idle-safety regression tests. - Real PostgreSQL tests hold transactions open after an injected client response loss, then commit or abort. They verify that an empty scan cannot clear an in-progress transaction. Another test terminates a real backend and verifies recovery without replay. - Coordinator tests cover an hour with no empty-queue timers, pending/error retries, worker replacement, concurrent writes, earliest-deadline preservation, rollback during idle drain, committed work during drain, standby, and shutdown. - Local `pnpm test:run` was started and stopped after embedded PostgreSQL startup failures appeared. It did not finish and is not reported as a pass. Later local database reruns had skipped suites; those skips are not claimed as verification. The earlier PostgreSQL tests did execute and pass, and the final hosted full matrix passed. ## Risks - One XID query is added per transaction that registers delivery work. Nested transactions share that ID. Registration must be awaited before writing; new enqueue paths must follow this contract. - Work signals are local to a DB owner and its dedicated child pools. Independent roots, direct SQL, or other processes are not observed. Startup scans recover already committed rows, but do not fence late transactions from a previous process. Cross-process ownership and database failover require separate work. - A database outage or genuinely unresolved transaction keeps an idle hold until status can be reconciled. No timer clears uncertainty by assumption. - These changes remove five empty polling loops. They do not implement whole-instance sleep, database teardown, or an external waker. The earliest deadline covers only the registered queues. - Waiting tool reviews retain their existing retry cadence until their receipts can be delivered. - Feedback vote responses no longer wait for the remote upload. Sharing consent and the saved vote response are unchanged. - Real hosting-provider sleep and cost savings have not been measured. ## Model Used OpenAI Codex, GPT-6. Used reasoning, repository inspection, code editing, and command execution. The runtime did not expose the exact model revision or context window. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
|
d66acb7ac1 |
feat: automate Slack bot app setup and installation (#15413)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Chat connectors give each agent a customer-owned bot and task-backed conversations. > - Manual Slack setup requires app creation and copying durable credentials. > - Operators need a shorter setup that an assisting agent can use safely. > - This pull request creates the app through Slack's Manifest API and installs it through OAuth. > - Durable registration state supports recovery without creating another app. > - A four-screen wizard, automatic avatar upload, and OAuth account linking reduce setup work. > - Connector settings and per-turn tool guidance support daily use after installation. ## Linked Issues or Issue Description **Subsystem affected** Native Slack bot setup, company secret storage, chat connector management, and agent tool guidance. **Problem or motivation** New Slack bots require manual app creation and copying a signing secret and bot token. Interrupted setup can create duplicate apps. The setup and management screens contain unnecessary controls. Agents also need guidance for native questions, files, thread replies, and governed Slack actions. **Proposed solution** Use a temporary app-configuration access token to create a customer-owned app. Save durable secrets in the vault. Bind OAuth to the initiating actor, company, endpoint, registration revision, scopes, and configured origins. Preserve manual and existing-app recovery. Link the installing user's account, send a welcome DM, and advance from saved server evidence. Keep request-URL recovery instructions available if automatic connection detection waits. **Alternatives considered** The Slack CLI adds installation requirements. Socket Mode changes transport. A shared Paperclip-owned app changes app ownership. These alternatives are outside this change. **Roadmap alignment** This extends existing chat connectors and secrets capabilities. Related public work: #14037 and #13954 cover Slack MCP prerequisites and user OAuth. No duplicate bot-registration PR was found. ## What Changed - Share one reviewed manifest builder between automatic registration and manual setup. - Add replay-safe migration 0318 and company-bound registration state with vault references and uncertain-creation recovery. - Add registration, installation, callback, and resume APIs with short-lived, single-use OAuth state. - Save installation credentials before downstream checks and preserve bot identity constraints. - Reduce automatic setup to four screens. Keep advanced app details, manual recovery, and existing-app setup. - Upload the agent avatar with the Paperclip dark background. Link the OAuth installer's account and send setup DMs. - Show agent and connector-owner avatars. Simplify settings, access, and conversation screens. - Discover joined Slack channels and enable them by default. Start a task from a bare mention and admit same-thread follow-ups. - Refresh Slack tool guidance each turn. Add native-form, file, approval, and delivery regressions plus manual model probe definitions and sanitized acceptance records. - Update deployment/database docs, OpenAPI, redaction, removal cleanup, production Storybook stories, and provider browser tests. - Merge current master and move the registration migration after its latest migration without rewriting published commits. The completed Slack success view intentionally has a single centered **Done** action and no **Save & exit**, as explicitly requested by the product owner. `DESIGN.md` records this exception; unfinished setup steps retain the aligned wizard footer. ## Verification - Passed after the master merge: repository typecheck, full build, Storybook build, design-token gates, module-boundary gates, and migration generation. - Passed: all 352 focused Slack deterministic tests and all 14 affected provider browser tests. Browser tests use controlled provider fixtures and a separate throwaway instance. - Passed on current head `c5d01e0e2`: the complete GitHub test matrix (general server, chat, all workspaces, serialized server, and Runner), all eight browser shards, typecheck/release registry, build, canary dry run, security checks, and policy gates. There are 52 passing checks and no pending or failing checks. - Greptile completed on the exact current head with 5/5 and no actionable findings or open review threads. - Local repair verification passed 93 focused tests, including same-app reinstall after revocation and rejection of consent started before revocation, the AgentMail browser journey, and repository typecheck. Local build and Storybook build also passed. The redundant local full-suite rerun was stopped after the complete current-head CI matrix passed. - Real Slack setup and agent replies were exercised in the authorized isolated test drive during the setup iteration. - The ten additional model probes were attempted with legacy `codex_local`, `gpt-5.6-sol`: five passed, two failed, and three were partly verified. Native runtime is not qualified. See `server/src/services/connectors/slack/evals/2026-10-08-acceptance.md` for evidence and limits. - Passing model probes cover native forms, downloaded file bytes, bare mentions with thread replies, explicit posts/reactions, and saved approval denial. - The controlled uncertain-write probe found wrong delivery-check IDs. The canvas fallback attempt used an invented tool name. Search pagination/native search, a private-source denied-tool receipt, and distinct board/webhook origins remain unqualified. Reviewer path: enable Chat connectors, start Slack chat setup, select an agent, enter an app-configuration access token, and approve Slack installation. Send a message to the bot and confirm that setup advances to success. Inspect settings and allowed channels. See `doc/connections/SLACK-AUTOMATIC-SETUP.md` for deployment and recovery. ## Risks - Slack app creation has no provider idempotency guarantee. A timeout after dispatch stays uncertain until the operator checks Slack. - OAuth needs a stable public HTTPS board origin. Webhook ingress may use a separate configured HTTPS origin. Workspace policy can delay installation. - Migration 0318 can replay safely on instances that applied the earlier development migration. - OAuth installation now links the installer to the initiating Paperclip user. Identity checks and company access rules still apply. - Joined channels now enable bot responses by default. Linked-user authorization and per-action approval rules still apply. - Model behavior has the documented delivery-check and canvas fallback failures. A passing CI run does not establish that every model probe passed. - Removing the connection does not delete the customer's Slack app. No new first-party telemetry is added. ## Model Used OpenAI Codex, GPT-6 family, with reasoning, repository tools, code execution, and browser verification. The runtime does not expose a more specific authoring model ID or context-window size. The live bot probes used OpenAI `gpt-5.6-sol` through `codex_local` in legacy mode. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
|
3a726e676f |
feat: enforce private task permissions across execution and data (#10633)
Enforce private task and project access across direct reads, search, execution, files, plugins, live delivery, and sharing mutations. Preserve downward-only sharing, current responsible-user authorization, and audited emergency access. Bind historical draft assets with migration 0314. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
|
b67db12d90 |
feat: add durable storage for private tasks (#14717)
Add private task and project ownership, downward access grants, and immutable run/workspace provenance. Apply migration 0313 with bounded batch commits and concurrent indexes. Keep the enforcement and sharing changes in their dependent PRs. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
|
b508a05c43 |
feat: add internal agent complaints and suggestions (#15367)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Agents use legacy skills or native runner tools to work on tasks. > - Those agents can encounter friction that does not belong in the task thread. > - A complaint should preserve the raw reaction. A suggestion should describe an improvement. > - This pull request adds attributed local storage and both submission paths. > - Agents can submit feedback once and continue their primary work. ## Linked Issues or Issue Description **Subsystem affected** Server, database, shared contracts, runtime skills, and native runner tools. **Problem or motivation** Agents have no default internal channel for incidental complaints and suggestions. Sending this feedback through task comments adds noise and can alter task workflows. **Proposed solution** Store free-form feedback in the current instance database. Derive agent, run, company, and task attribution from active authority. Provide default legacy skills and provider-neutral native actions. Keep the instructions close to Warp's MIT-licensed originals. **Alternatives considered** Task comments and external Slack delivery add unwanted side effects. Mandatory suggestion fields and short editorial limits would discard useful feedback. This release has no listing API, UI, read tool, automatic triage, or external forwarding. **Roadmap alignment** This is a maintainer-requested addition to the existing runtime skills and runner tool paths. It does not duplicate a listed roadmap milestone. Searches for complaint tooling, suggestion-box, and agent commentary found no overlapping public PR or issue. ## What Changed - Add the company-scoped `agent_commentary` table, shared validation, and idempotent migration `0310`. - Add one transactional service and the agent-only POST route. Validate active authority before writes or replay. Redact known credentials. Commit a content-free audit with each new record. - Add `submit_complaint` and `submit_suggestion` to standard, ask, and planning modes. Keep review, revocation, and completion restrictions. Store replay identity on the commentary row. - Mount `complain` and `suggestion-box` by default for legacy agents. Bundle a dependency-free Node.js stdin helper in the operational skill and allow its POST through the sandbox bridge. - Preserve Warp's complaint voice and suggestion guidance, with attribution and local transport adaptations. Keep source attribution and MIT notices in each skill's LICENSE, outside runtime instructions. - Document custom-runtime HTTP use and database inspection. Add real-database tests and a repeatable live Codex smoke for local and Daytona execution. - Pin the lagging-source migration fixture before the identity-repair migration so later migrations preserve its regression coverage. ## Verification - Personally ran real Codex submissions in all four environments on 2026-10-06. Local runs passed at 20:35 UTC. Daytona native passed at 20:31 UTC; Daytona legacy passed at 20:33 UTC. Each stored exactly two rows with company, agent, run, and task attribution, wrote the continuation marker, exited zero, created no task comments, and left task status unchanged. Each recorded two content-free activity entries. - Daytona used production provider hooks, real remote execution and file transfer, the legacy queue callback bridge, and native private WebSocket ingress. The current Linux runner was built from `abf47b595`, staged, and verified against controller contracts. Both sandboxes were confirmed deleted. This is a focused feedback transport smoke; it does not claim full Runner E2E catalog or browser qualification. - The immutable base image and Linux binary digest are recorded in [the verification documentation](https://github.com/paperclipai/paperclip/blob/codex/agent-commentary/doc/agent-commentary.md#verification). The smoke script can save content-free JSON evidence. No credentials or feedback bodies are in these reports. | Environment | Runner | Complaint row | Suggestion row | | --- | --- | --- | --- | | local | legacy Codex | `59413a00-1de2-4bb1-bcc6-9c4b54c64aa6` | `3db2364d-3e15-4f47-846f-875d3902999d` | | local | native Codex | `5da22b5f-41df-4de5-8ba0-d9345ab01267` | `2d5abe17-dd41-403c-a5ee-4729f2d58921` | | daytona | legacy Codex | `27c9d0aa-8477-409f-9da0-e8ffa48dee50` | `209681c9-d1e9-4ce1-999e-48fa07692389` | | daytona | native Codex | `6eb001bb-4bcf-43f7-8717-f662f53dc7c3` | `77c383d8-a997-49e5-a33e-25c70e15c0b2` | - Run the local check with `node cli/node_modules/tsx/dist/cli.mjs server/scripts/verify-agent-commentary-live.ts`. The documentation gives the Daytona invocation. Both use disposable instance databases and normal Codex provider usage. - Repository `pnpm -r typecheck` and `pnpm build` passed after the test extension. The build includes runner generation, contracts, and replay checks. The smoke scripts also passed a separate TypeScript check. The lagging-source migration regression passed. All equivalent current-head Vitest CI shards passed. The local monolithic `pnpm test:run` invocation was stopped after CI supplied that coverage; it did not complete locally. - Focused tests cover company isolation, spoofing, revoked credentials, stale ownership, post-finish rejection, concurrent replay, conflicting keys, atomic rollback, and deletion through existing services. Boundary tests cover empty text, Unicode, text beyond 8,000 characters, and the 524,288-character ceiling without truncation. Mounting tests cover Codex, Claude, and sandbox staging. Helper tests cover standalone Node execution, stdin, invalid UTF-8, redirects, HTTP failure, and its deadline. Privacy and bridge tests cover successful and rejected requests. - Instructions were compared with Warp's originals. MIT notices and source credits live only in LICENSE files. Native tools preserve truthful disclosure when asked, without routine announcements. - [Full CI](https://github.com/paperclipai/paperclip/actions/runs/37508559190) and Greptile 5/5 passed on the earlier feature commit `5209c3501`. The later head found the migration-fixture assumption fixed in this update. On `8a4965164`, all 55 check contexts passed after one browser shard rerun. Its initial reviewer signoff failure also passed an isolated local browser run (1 test). Greptile scored that head 5/5 and identified one smoke cleanup gap. `6ecbafb0b` fixes failed-acquisition cleanup with four passing tests and a passing smoke-script typecheck. Fresh CI is pending for this final test-only fix. No commentary production code changed during verification. ## Risks - Feedback is internally attributed. It is not anonymous. Existing redaction removes known credentials, but agents must still omit sensitive content. Normal provider transcripts can include their submitted arguments. - Default skill availability changes for existing legacy agents. Runtime policy filtering still applies. The helper uses the existing Node.js runtime with no extra dependencies; custom runtimes can call the HTTP endpoint. - Feedback is removed with its run, agent, or company. Task deletion clears only the issue pointer. Normal database backups include the table. - The migration is additive and has no backfill. Writes serialize on the active run for replay consistency. No server suggestion quota is imposed. ## Model Used OpenAI `gpt-6-astra` through Codex, with `xhigh` reasoning effort and a reported 258,400-token context window. Capabilities used: repository inspection, code execution, and live runtime verification. No subagents were used. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
1cebdd4c4f |
Add plugin lifecycle delivery and an initial resource baseline (#15343)
## Thinking Path > - Paperclip manages agents and projects for work. > - Their lifecycle changes already commit to a durable journal. > - Plugins need to read these records and track completed work. > - Existing resources need a one-time baseline before delivery is enabled. > - Worker crashes must leave unfinished records available for retry. > - Each plugin needs its own progress and company access checks. > - This PR adds a pull inbox through the existing plugin SDK and job system. ## Linked Issues or Issue Description **Problem or motivation** Plugins cannot consume the durable resource lifecycle journal. In-process notifications can disappear during a restart and cannot record successful completion. Resource plugins need retries, company boundaries, and ordered transitions. **Proposed solution** Add `ctx.events.listLifecycle(companyId, limit?, afterId?)` and `ctx.events.acknowledgeLifecycle(companyId, eventId)` under `events.subscribe`. Seed a one-time baseline from current resource state. Deliver creation first, then the remaining transitions in ID order. Store acknowledgments for each plugin. Use existing plugin jobs to poll configured companies. **Alternatives considered** A global sequence cursor can skip lower IDs that commit later. Fire-and-forget subscriptions cannot record completion. A new dispatcher is unnecessary because plugin jobs support polling. Consumers serialize polling and use provider idempotency keys. **Roadmap alignment** This extends the existing plugin system and builds on #15280 and #15306. Searches found no duplicate resource inbox work. Related #13306 exposes decision events on the in-process bus. This PR includes the initial journal baseline. Provider provisioning remains separate work. ## What Changed - Add company-scoped lifecycle reads and acknowledgments to the SDK and worker RPC host. - Gate both methods by capability, invocation or proactive company scope, plugin readiness, and company enablement. - Seed hired agents and all projects once. Preserve paused/terminated agent state and archived project state. Keep pending hires behind approval. - Preserve existing history and deliver backfilled creation before partial transition histories. - Deliver project archive events from #15371 through the SDK. Seed archive intents for archived projects and update intents for active projects with a partial archive history. - Store acknowledgments per plugin and reject acknowledgments that skip earlier resource events. - Page past failed resources while retaining their pending records. Reset the page cursor each sweep to include late commits. - Add acknowledgment storage, an index for resource ordering, tests, and authoring guidance. - Preserve native identity definitions and sequence progress in JavaScript backups. Repair journal ID generators lost by older backups before seeding the baseline, without changing existing IDs. ## Verification - `pnpm -r typecheck` passed after the final origin/master rebase. - `pnpm build` passed before the final metadata rebase. The final CI build also passed. - All 46 focused lifecycle, SDK harness/RPC, migration snapshot, and legacy restore checks passed again with migration 0309. - Checks cover retries, per-plugin progress, resource order, capability/company boundaries, baseline idempotency, approval gates, archive delivery, restored projects with partial histories, and atomic migration rollback. - Full CI passed on final commit `0e674b87fc`. One unrelated Cursor fixture hit a 10-second timeout; it passed locally in under one second, and the failed server shard passed on retry. - Greptile scored the final commit 5/5 with no unresolved review threads. - The branch is rebased onto origin/master and is conflict-free. - Earlier full local runs were stopped as scope changed. CI ran the complete repository suite. - `git diff --check` and a local secret/PII scan passed. ## Risks - Apply migration `0309_loving_the_hood.sql` before starting the new server. It creates acknowledgment storage and an index, then seeds the baseline in the same transaction. Agent/project writes wait for the migration to commit. Keep these writes quiesced through the migration and activation of the new capture-capable server; do not resume an older runtime that lacks capture after the baseline. - The baseline records current desired state, not historical transitions. It includes archived projects and terminated-agent cleanup intents. It runs once with the delivery migration; no later or runtime journal backfill is planned. - Delivery is at least once. Concurrent reads can repeat an event. Consumers must serialize polling, use stable company/event idempotency keys, and acknowledge successful operations only. - Reset `afterId` at the start of every polling sweep. It is a page cursor, not a persisted high-water mark. - Deleting a plugin removes its acknowledgment records. A new installation may replay existing journal events. - Records contain identity and action. Consumers must load current authorized data before acting. Cleanup and retention policy belong to the provider plugin. - Provider calls, VM/volume provisioning, and journal retention are outside this PR. ## Model Used OpenAI Codex, based on GPT-6, with reasoning, repository inspection, code execution, and tool use. The exact deployment model ID and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
|
a590ab769d |
Give managed agents persistent cryptographic identities (#15352)
Give agents persistent Ed25519 identities encrypted with the existing instance master key. Create keys transactionally for new agents and lazily before supported managed runs, expose public identities in the API and agent UI, and protect private material during runtime delivery and output persistence. Preserve identities in recovery backups while giving imported and development-cloned agents fresh keys. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
d9f600043f |
Capture project archive and restore lifecycle events (#15371)
## Thinking Path > - Paperclip manages projects and their repositories. > - Resource changes commit to a durable lifecycle journal. > - Project archive changes currently leave no journal record. > - Consumers need to observe archive and restore transitions. > - The record must commit with the project change. > - This PR adds project archive capture before plugin delivery in #15343. ## Linked Issues or Issue Description **Problem or motivation** Archiving a project does not record a lifecycle event. Restoring an archived project also emits no event when it is the only change. Consumers cannot observe these transitions through the journal. **Proposed solution** Record `archive` when an active project becomes archived. Record `update` when an archived project is restored. Keep both writes in the existing project transaction and row lock. Repeated status requests emit no new status record. **Alternatives considered** An in-process notification can disappear on restart. A separate archive service would duplicate the existing mutation path. Use the existing journal and project transaction. **Roadmap alignment** This extends lifecycle capture from #15280 and #15306. It should merge before the delivery PR #15343. The roadmap and related PR search showed no duplicate archive lifecycle capture. ## What Changed - Allow project `archive` records in the journal constraint and TypeScript type. - Capture archive and restore transitions under the existing project row lock. - Emit `update` then `archive` for an edit combined with archive. - Preserve repository records and roll back the project change if capture fails. - Add migration `0307_cool_naoko.sql`, tests, and database documentation. ## Verification - `pnpm -r typecheck` passed after the final master rebase. - `pnpm build` passed before the final master rebase; the final CI build also passed. - 20 targeted lifecycle, migration snapshot, and legacy restore tests passed on the current migration. - Tests cover concurrent archives, repeated archive/restore requests, repository retention, combined edits, atomic rollback, and upgrades from older JavaScript backups without the action constraint. - All 53 applicable CI checks passed on final commit `1021953035`; the two Storybook checks were skipped as expected. - Greptile scored the final commit 5/5 with no unresolved review threads. - `git diff --check` and a local secret/PII scan passed. - Prior CI found a missing-constraint restore failure; the migration now handles it. A separate runtime readiness timeout passed locally. The current full CI run passes both paths. ## Risks - Older JavaScript restores may omit the action check. The migration tolerates its absence and installs the complete check. - Apply the constraint migration before running the new capture code. It takes a short table lock and validates existing journal rows; it changes no existing records. - This PR captures future transitions only. The one-time baseline and plugin consumption remain in #15343, which must be rebased after this PR merges. - Archive records authorize no provider cleanup. Provider behavior and volume retention remain separate work. - An edit combined with archive emits two ordered records in one transaction. ## Model Used OpenAI Codex, based on GPT-6, with reasoning, repository inspection, code execution, and tool use. The exact deployment model ID and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Devin FoleyandPaperclip
|
202c2d307e |
fix(server): leave unclaimed warm Cloud databases idle (#15314)
## Thinking Path > - Paperclip manages work performed by AI agents. > - Managed deployments prepare empty applications before an owner claims them. > - Those applications start database pollers even though no company can have work. > - Health probes also query SQL, so idle databases cannot remain suspended. > - This pull request adds an explicit standby marker for empty, unclaimed Cloud apps. > - The existing signed, durable claim resumes normal processing without restarting the app. ## Linked Issues or Issue Description **What happened?** An empty, unclaimed warm application runs recurring chat, email, plugin, heartbeat, cleanup, and reconciliation queries. Its health route also opens the database. This prevents idle database compute from suspending. **Expected behavior** An explicitly marked unclaimed application should keep its HTTP process and sandbox provider plugins ready while leaving the database idle. A successful signed claim should resume normal API behavior and background processing. Claimed and self-hosted instances should keep their current behavior. **Steps to reproduce** Start an empty Cloud-managed application and leave it unclaimed. Observe database activity while repeatedly requesting `/api/health`. Before this change, periodic queries continue without company data. Related: #15153 reduces allocation during chat polling. This change suppresses polling only for explicitly marked, empty, unclaimed Cloud apps. ## What Changed - Add `PAPERCLIP_CLOUD_WARM_STANDBY=1`. Check company emptiness once after restoring the persisted Cloud runtime identity. Missing Cloud configuration, existing data, or a persisted claim leaves normal processing active. - Gate recurring database pollers with an in-memory predicate. Keep startup preparation and sandbox provider plugin loading intact. - Serve unclaimed health probes without session or database reads and report `warmStandby: true`. Serve standby pages/assets directly from the UI router, bypassing session, bearer, tenant, and dynamic handlers. Refuse API requests and all WebSocket upgrades before authentication can query SQL or seed company data. - Exit standby after the existing signed identity assertion commits. Normal timers resume at their next tick; a restart restores the claim even with stale provider variables. - Document the marker, readiness semantics, rollout checks, and rollback. ## Verification - `pnpm -r typecheck` passed. A final server typecheck also passed after adding tests. - `pnpm build` passed. - Focused standby, signed claim, restart, health, static/Vite routing, hostname, HMR, and live-events suites: 72 passed after the review fixes. Includes real HTTP upgrade admission before/after claim. - `pnpm test:run` was attempted locally; both superseded runs were stopped after encountering checkout/platform failures. A clean-checkout rerun eliminated ancestor skill-directory lookup failures. The company-skills/runtime-cache families encounter macOS read-only-directory rename failures (`EACCES`); all three company-skills failures reproduce on unmodified base `bf14f803d5`. The initial full run also reported one native runner API test failure; an isolated comparison on both revisions was blocked by local embedded PostgreSQL startup failures. The full [Linux CI run](https://github.com/paperclipai/paperclip/actions/runs/37423263993) passed on final commit `5016c415ea`, including all server and workspace test shards, browser suites, typecheck, build, and release canary. This is not a claim that the full local suite passed. - Isolated full server with local PostgreSQL: after startup and connection expiry, 70 health probes, 70 page requests carrying valid synthetic tenant credentials, and 70 rejected WebSocket upgrades over 70 seconds observed zero app database connections. The signed claim completed in 62 ms and normal polling resumed (475 database transactions over 12 seconds). Restart with stale provider variables restored the durable claim. The latency is local-only, not a provider wake measurement. - Apex review: **5/5** on `5016c415ea`, both earlier threads resolved, no open recommendations. - No live-provider test or production deployment was performed. An actual database suspension/resume canary remains required before enabling the control-plane switch. ## Risks - Standby health reports HTTP readiness rather than current database connectivity. The signed claim still requires a durable database write; claimed health checks retain the SQL probe and 503 failure behavior. - Pollers resume at their usual intervals. A suspended database may add claim latency. Validate the real provider before enabling the marker. - Startup preparation and sandbox plugins remain loaded. New plugins or background loops must respect the same standby contract. - The marker is off by default. Remove it or set it to `0` and restart to roll back. No schema migration or claimed-workspace inactivity policy changes. ## Model Used OpenAI Codex, based on GPT-6. The exact serving snapshot and configured context-window size are not exposed in this session. Assistance included source review, TypeScript changes, command execution, and PostgreSQL tests. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [ ] I have run tests locally and they pass — targeted tests pass; full local suite limitations are documented above, and full Linux CI is green - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
44e4979d23 |
Capture project and repository update lifecycle events (#15306)
## Thinking Path > - Existing lifecycle capture records agent transitions and project creation. > - Project and repository edits need matching project update records. > - The record must commit with the mutation so failed writes cannot lose a hook. > - Creation with repositories is one creation, and repository replacement is one update. > - Archive-only changes preserve project state without creating a hook. > - Plugin consumption and provider behavior are separate work. ## Linked Issues or Issue Description **Problem or motivation** Project edits and repository/workspace changes lack durable lifecycle records. A future resource plugin needs those changes captured alongside the existing project creation hook. Archive-only changes must produce no hook. **Proposed solution** Allow project `update` records in the existing lifecycle journal. Record project and workspace mutations in their database transaction while holding the project row lock. Suppress intermediate workspace hooks during project creation and aggregate repository replacement. **Alternatives considered** Route-only hooks miss shared service callers. Recording after commit can lose an event. Emitting a hook for each child mutation exposes intermediate repository state. **Roadmap alignment** This completes project lifecycle capture begun in #15280. Plugin delivery, VM/volume provisioning, and backfill remain separate. Searches found no duplicate project lifecycle work; related #13306 concerns decision events on the in-process plugin bus. ## What Changed - Record project edits and workspace additions, updates, and removals as project `update` events. - Commit each event atomically with its mutation under the project row lock. - Keep project creation with repositories to one creation event and repository replacement to one aggregate update. - Ignore archive-only changes and retain workspace records. - Extend the journal action constraint and document project update capture. ## Verification - `pnpm -r typecheck` passed on the narrowed scope. - 57 tests passed across six lifecycle, project, repository, and chat-project suites. - Seven managed-sandbox workspace route tests and the CLI lagging-worktree migration regression passed (65 targeted tests total). - Full GitHub CI passed on `8ba6f97f22`; all required gates are green. - Greptile scored the final project-only commit 5/5 with zero unresolved review threads. - The branch is current with `master` and has no merge conflicts. - `git diff --check` and a local secret/PII scan passed. ## Risks - Apply migration `0300_chunky_chamber.sql` before running the new server. It permits project update actions and tolerates older JavaScript worktree backups that omitted the prior CHECK constraint. - Event-write failure intentionally rolls back the project or repository mutation. - Records contain identity and action; future consumers must load current authorized project/workspace data. - Plugin consumption, provider calls, volume cleanup, and backfill are outside this PR. ## Model Used OpenAI Codex, based on GPT-6, with reasoning, repository inspection, code execution, and tool use. The exact deployment model ID and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Devin FoleyandPaperclip
|
d21fe31243 |
Retry pooled execution projection reads after disconnects (#15300)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Task run lists show current execution and recovery state. > - Their execution projection reads runs, finalizations, pending interactions, and recovery records. > - A temporary database disconnect in one lookup makes the run list fail. > - This pull request uses the existing bounded retry policy for these read-only lookups. > - It keeps transaction reads, authorization, and liveness writes outside the retry scope. ## Linked Issues or Issue Description Refs #15248. This extends the same bounded SELECT retry policy to the execution projection used by task run lists. A wrapped `CONNECTION_CLOSED` error from the pending-interaction SELECT makes `GET /issues/:id/runs` fail. These lookups are safe to repeat on the pooled database connection. The shared projection helper also serves transaction callers, so retries must remain an explicit opt-in. ## What Changed - Opt the activity run list into per-query projection retries. Keep the default path single-attempt for transaction callers. - Rebuild only the failed SELECT. Use the existing three-attempt limit and 50/100 ms delays. - Keep completed reads, route authorization, and liveness backfill writes outside the retry callbacks. - Test each query, exhaustion, exact error preservation, non-transient errors, empty results, transaction defaults, run-list backfill behavior, and denied route access. - Document the pooled-read boundary. ## Verification - Frozen install passed with Node 24.21.0 and pnpm 9.15.4. - 92 focused tests passed across execution projection, activity service/routes, prior service-read retries, and the shared retry policy. - Independent review passed 56 projection, retry-policy, and route authorization tests with no blocking findings. - `git diff --check` and the staged diff and PR-text secret/PII scan passed. - Full workspace `pnpm -r typecheck` and `pnpm build` passed. - Greptile scored exact head `78783e84a5` 5/5 with no findings or open review threads. - Initial CI had one Runner test timeout: `stops and closes a timed-out consumer even when the caller requested a warm session` exceeded 5 seconds. Its fixture uses a 1 ms session timeout. The Runner package is unchanged from the base. The focused case passed locally (1 passed, 138 skipped). One unchanged-head rerun of that job passed all 1,219 Runner tests and the additional native-runtime integration test. All other CI lanes passed on the initial run. - Full Linux CI passed on exact head `78783e84a5`: 53 successful checks, two intentional Storybook skips, and no pending checks. It provides aggregate test coverage. A full local aggregate was not launched. The same host's prior aggregate exposed three known macOS immutable-cache rename failures in unchanged company-skills code, documented in #15298. ## Risks - An affected lookup can take up to two additional connection attempts plus 150 ms of delay. Persistent failures still return the final error. - The opt-in is only used by the pooled activity read path. No transaction, mutation, full request, or provider action is replayed. - No schema or response-shape changes. ## Model Used OpenAI GPT-6 through Codex, with reasoning, repository editing, code execution, and independent agent review. The exact deployment model ID and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub references) - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass (focused suites; aggregate coverage is described above) - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
984f092ddf |
Add project and agent resource lifecycle hooks (#15280)
## Thinking Path > - Paperclip manages agents and projects for work. > - Plugins need reliable lifecycle hooks for these resources. > - In-process notifications can disappear during a restart. > - A lifecycle record must commit with the resource change. > - This pull request adds a generic lifecycle journal without provider calls. > - A later plugin delivery layer can use these records without losing lifecycle changes. ## Linked Issues or Issue Description **Problem or motivation** Resource provisioning needs durable hooks for agent hiring, pause, resume, termination, and project creation. Hooks must cover shared service callers, budget actions, and approval paths. Capture should work for all plugins and deployment modes. **Proposed solution** Record content-free events in the resource transaction. Deduplicate creation and unchanged status. Preserve each pause/resume cycle. Commit approval, activation, and creation together. Commit termination and API-key revocation together. **Alternatives considered** Event subscriptions alone cannot survive process failure. Cloud-only capture would exclude other plugins. Provider calls inside tenant transactions would couple resource creation to external services. **Roadmap alignment** This is lifecycle infrastructure for the existing plugin system. It adds no provider, adapter, UI, or plugin read API. Repository mutations and backfill remain separate work. Searches found no duplicate lifecycle-journal PR. ## What Changed - Add a company-scoped lifecycle journal and an additive migration. - Record hired-agent and project creation from shared services. - Record agent pause, resume, and termination, including generic updates and budget actions. - Lock agent state changes to suppress concurrent duplicate hooks. - Make hire approval, rejection, and termination transactions atomic with their lifecycle records. - Document capture, ordering, future per-plugin acknowledgments, and migration scope. ## Verification - Full workspace typecheck: `pnpm -r typecheck` passed. - Production build: `pnpm build` passed. - Focused agent, project, approval, budget, and built-in regressions: 102 tests passed across 9 suites. - Final lifecycle journal check: 14 tests passed. It covers repeated/concurrent transitions, rollback, key revocation, self-hosted capture, and company boundaries. - Review regression: 32 lifecycle and approval tests passed, including rejected-hire rollback and retry; server typecheck passed after the fix. - The initial local `pnpm test:run` overlapped the rejection fix and reported the new rollback regression against the earlier service code. A fresh lifecycle run passed all 14 tests. Fresh full local shards were stopped once the complete CI test matrix passed on the final commit. - `git diff --check` and a local secret/PII scan passed. - Greptile: 5/5 on `3ee3903f8e1a171ea3ba2bea9caa2b5766a3f807`, with the review thread resolved. - [Complete CI passed](https://github.com/paperclipai/paperclip/actions/runs/37374227222) on `3ee3903f8e1a171ea3ba2bea9caa2b5766a3f807`: general server/chat/workspace tests, serialized server suites, runner checks, build, typecheck, canary, and all end-to-end shards. The requester waived CI during the Actions outage, but the workflow subsequently completed successfully. ## Risks - The migration creates an empty table. It does not scan or backfill existing resources. - Apply the normal database migration before running this server version. Event-write failure intentionally rolls back the resource change. - Pending hires cannot bypass approval through pause or resume. - Capture works on all deployments. Plugin delivery, retention, retries, and provider actions remain separate work. No plugin can read this journal through a new API in this PR. - Future delivery must enforce company scope, track acknowledgments per plugin, and preserve resource order. A global sequence cursor can skip uncommitted transactions. - A termination hook does not authorize deleting persistent volumes. ## Model Used OpenAI Codex, based on GPT-6, with reasoning, repository inspection, code execution, and tool use. The exact deployment model ID and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Devin FoleyandPaperclip
|
17fa718675 |
Retry transient disconnects in scoped read queries (#15248)
Apply existing bounded transient-disconnect retries to audited dashboard, heartbeat-list, and base issue reads. Rebuild each query per attempt and preserve authorization, company scope, enrichment, and final error propagation. Validation: exact-head Greptile 5/5, passing CI, no unresolved review threads, and a clean merge. Detailed verification and limitations are recorded in the pull request. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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Devin FoleyandPaperclip
|
4a999089ef |
Retry transient failures in dashboard reads (#14873)
## Thinking Path > - Paperclip shows company activity in the dashboard. > - The dashboard reads company, task, approval, and cost data. > - A pooled database connection can close during one of these reads. > - The driver must reject ambiguous statements because writes may have committed. > - These four dashboard queries are known to be read-only. > - This change retries only the failed read and preserves completed work. ## Linked Issues or Issue Description Refs #14773, which correctly removed automatic replay of ambiguous database statements. Searched existing database and dashboard PRs. Related #8780 changes pool recycling and logging; #13925 adds dashboard consistency coverage. Neither provides these per-query retries. **What happened?** A dashboard request returns a server error when its company lookup, task count, approval count, or monthly spend query loses its database connection. Drizzle wraps the driver's connection error in `cause`. **Expected behavior** A transient connection failure gets a bounded retry of the specific read. Completed reads and budget processing are not replayed. Persistent outages and non-connection errors still fail the request. **Steps to reproduce** Inject a typed `CONNECTION_CLOSED` error into one of these reads. Then allow the next query to succeed. Before this change, the dashboard request fails immediately. ## What Changed - Apply independent retries to the company lookup, task counts, pending approval count, and monthly spend query. Each callback rebuilds its own query with the same company scope. - Extract the existing authentication retry helper as `retryIdempotentDatabaseOperation`. Preserve authentication behavior and its existing exports. - Retain the existing limit of three total attempts with 50 ms and 100 ms pauses. Match typed connection codes through the error cause chain. - Test later-read failures, unchanged query parameters, retry exhaustion, missing companies, and errors that must not retry. Document the boundary. ## Verification - Final focused dashboard, authentication, and real database wire suites: 38 tests passed. Six initial recovery regressions failed before the implementation. - `pnpm -r typecheck`: passed on the final source. - Independent review: no actionable findings. The reviewer separately passed all 38 focused tests and checked the code allowlist, attempt bounds, pauses, and final error identity. - `pnpm test:run`: the general-server group completed with 14,738 tests passed, 13 failed, and 87 skipped. All 13 failures match the previously reproduced clean-base macOS skill-cache failures. The two test files and their implementations are unchanged from that baseline. The runner exited after this group, so the remaining local workspace and serialized groups did not run. All corresponding Linux CI groups passed on this commit. - `pnpm build`: passed on the final source. - Full CI: 53 successful checks and 2 skips on `6a113529c0`. Greptile: 5/5 on that commit, with no review threads or remaining findings. - Merge compatibility with master `f2e0f19630`, including #14866: no conflicts. The five reviewed files are unchanged in the resulting merge tree. ## Risks A persistent outage adds at most two retries per covered query. Each connection attempt retains the configured driver timeout. The change does not repair the underlying network or database failure. Agent counts, run-activity queries, and the budget workflow stay outside these retry boundaries. General database statements and disconnected transactions are not replayed. There is no schema or authorization change. ## Model Used OpenAI GPT-6 through Codex, with reasoning, repository inspection, code editing, and test execution. The runtime does not expose a more specific serving model identifier or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass (38 focused tests; the full local run has the baseline limitation documented above) - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |