Commit Graph
614 Commits
Author SHA1 Message Date
DottaandPaperclip 08dd27ecb0 Integrate current master Docker cache and run-event compatibility
* codex/work-folders-remote-recovery-refresh:
  ci: cache compiled Docker Rust dependencies separately from source (#13329)
  ci: rebalance serialized tests with current suite durations (#13328)
  fix: preserve NUL characters in run-event payloads (#13325)
  ci: run release Runner protocol and Rust checks in parallel (#13326)

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-12 14:21:35 -05:00
DottaandPaperclip 95388e6f68 Integrate current master Docker cache and run-event compatibility
* codex/work-folders-staging-hardening-refresh:
  ci: cache compiled Docker Rust dependencies separately from source (#13329)
  ci: rebalance serialized tests with current suite durations (#13328)
  fix: preserve NUL characters in run-event payloads (#13325)
  ci: run release Runner protocol and Rust checks in parallel (#13326)

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-12 14:21:35 -05:00
DottaandPaperclip 8fd2d023c8 Integrate current master Docker cache and run-event compatibility
* codex/work-folders-runtime-hardening-refresh:
  ci: cache compiled Docker Rust dependencies separately from source (#13329)
  ci: rebalance serialized tests with current suite durations (#13328)
  fix: preserve NUL characters in run-event payloads (#13325)
  ci: run release Runner protocol and Rust checks in parallel (#13326)

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-12 14:21:35 -05:00
DottaandPaperclip 9c77c14d18 Integrate current master Docker cache and run-event compatibility
* codex/work-folders-storybook-refresh:
  ci: cache compiled Docker Rust dependencies separately from source (#13329)
  ci: rebalance serialized tests with current suite durations (#13328)
  fix: preserve NUL characters in run-event payloads (#13325)
  ci: run release Runner protocol and Rust checks in parallel (#13326)

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-12 14:21:35 -05:00
DottaandPaperclip fc7551a2be Integrate current master Docker cache and run-event compatibility
* codex/work-folders-pi-refresh:
  ci: cache compiled Docker Rust dependencies separately from source (#13329)
  ci: rebalance serialized tests with current suite durations (#13328)
  fix: preserve NUL characters in run-event payloads (#13325)
  ci: run release Runner protocol and Rust checks in parallel (#13326)

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-12 14:21:34 -05:00
DottaandPaperclip a34f739663 Integrate current master Docker cache and run-event compatibility
* codex/work-folders-base-refresh:
  ci: cache compiled Docker Rust dependencies separately from source (#13329)
  ci: rebalance serialized tests with current suite durations (#13328)
  fix: preserve NUL characters in run-event payloads (#13325)
  ci: run release Runner protocol and Rust checks in parallel (#13326)

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-12 14:21:34 -05:00
DottaandPaperclip b8bdef1954 Merge frozen master into work-folders base
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-12 14:21:34 -05:00
Devin FoleyandPaperclip 7435b2ee9c ci: cache compiled Docker Rust dependencies separately from source (#13329)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Paperclip Cloud deploys images that contain the native Rust Runner.
> - The image already builds that Runner before copying ordinary app
source.
> - A Rust source change still invalidates its entire compiled
dependency layer.
> - Compiled dependencies can survive source changes when their recipe
is unchanged.
> - This PR adds a separate locked dependency build before compiling the
real workspace.

## Linked Issues or Issue Description

Refs #13195. A search of related Docker and Cargo cache PRs found no
duplicate dependency-recipe change.

**What existing behavior does this improve?**

Docker image build time after Rust source or embedded protocol changes.

**Current behavior**

The `runner-build` stage compiles dependencies and workspace code in one
layer. In Cloud readiness run 34698143548, that stage took about 3m48s
when its cache was unavailable.

**Proposed behavior**

Generate a recipe with pinned cargo-chef 0.1.73. Build locked release
dependencies in `runner-deps`, then copy and compile real Rust source
and embedded protocol inputs in `runner-build`. Source edits can reuse
the dependency layer from the existing registry cache.

**Reason and benefit**

Reduce dependency recompilation during source changes and merge bursts.
Expected savings are roughly 2–4 minutes when the old native layer would
miss but dependency layers are available. Full cold builds also pay for
the recipe tool installation. Ordinary app-only cache hits gain little
from this change.

**Breaking changes**

None to the shipped application or image tags. The recipe tool and
compiled dependencies remain in build stages.

## What Changed

- Install a pinned recipe generator with its locked dependencies and the
existing package-owned compiler.
- Add recipe planning and compiled dependency stages. Use the same
release profile, package, binary, and lockfile enforcement as the real
native build.
- Remove generated source stubs before copying actual source. Preserve
protocol inputs, timestamp normalization, binary staging, and
application checks.
- Add Docker cache wiring regressions and update the Docker cache
documentation.
- Run a two-build probe in Docker Runner check. It requires dependency
reuse, changed real binary metadata after a source edit, and a changed
recipe after a dependency declaration edit. It uses a disposable
tracked-source context and exports only small metadata files.

## Verification

- Passed all five Docker build-stamp and dependency-cache tests with
`pnpm exec vitest run server/src/__tests__/docker-build-stamp.test.ts`.
- Passed the local ARM64 `docker buildx build --target runner-build
--progress plain`. Local Docker then hit storage errors during a runtime
probe; cache invalidation verification continues on GitHub-hosted Linux.
- Passed `bash -n scripts/check-docker-runner-cache.sh`, `actionlint`,
and `git diff --check`.
- Passed a [Linux AMD64 cache
probe](https://github.com/paperclipai/paperclip/actions/runs/34711042199)
against the PR source: dependencies compiled in 3m49s for the baseline
and were `CACHED` after a source edit; real source compilation took
about 37 seconds. Binary metadata changed and dependency declaration
changes altered the recipe. The permanent probe is also running in
latest-head Docker Runner check.
- Passed latest-head [Docker Runner
check](https://github.com/paperclipai/paperclip/actions/runs/34711145160),
including the permanent source/dependency invalidation probe.
- Passed full [PR
verification](https://github.com/paperclipai/paperclip/actions/runs/34711145352/attempts/2):
typecheck, all grouped tests, native verification, build, release dry
run, and browser checks. One unrelated signoff-policy browser test
failed waiting for a heartbeat run on attempt 1; only that failed shard
and dependent checks were retried, and passed.
- Latest-head Greptile is 5/5 with no unresolved findings. Full local
tests/build were limited by local disk exhaustion; Linux CI completed
those checks.

## Risks

- The two-build CI probe has a 20-minute job limit to cover the cold
build and source rebuild. It adds no AWS routing.
- A fully cold build must install cargo-chef and populate the dependency
layer. Both become reusable registry layers; no Actions cache is added.
- The recipe and final build must keep the same compiler, build profile,
package, binary, and directory layout. A source-change rebuild probe
checks real cache reuse and binary invalidation.
- Dependency or compiler changes still require rebuilding dependencies.
Existing image verification and full-SHA publication gates remain
unchanged.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, repository tools, and code
execution. The exact serving model ID and context window are not exposed
by this environment.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-12 11:57:32 -07:00
DottaandPaperclip ed50a39c3f fix: preserve NUL characters in run-event payloads (#13325)
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-12 13:34:45 -05:00
Dotta 2ef499b62d Merge current master and decision admission fixes from work-folders remote recovery
Co-Authored-By: Paperclip <noreply@paperclip.ing>

* codex/work-folders-remote-recovery-refresh: (25 commits)
  fix: retain saved messages while decisions are pending
  fix(server): stop reporting expected managed-cloud transients to Sentry (#13323)
  fix: promote review tasks when continuations start (#13318)
  fix: require explicit native completion reviews (#13314)
  fix(onboarding): make chief-of-staff hiring reliable (#13317)
  fix: fence native startup against cancellation (#13316)
  chore(skills): allow verified PR merges (#13313)
  feat: add experimental persistent agent chat (#13284)
  chore(lockfile): refresh pnpm-lock.yaml (#13279)
  fix(ui): improve mobile task spacing (#13304)
  fix(connections): repair and simplify Google Workspace setup (#13289)
  fix(ui): stabilize steered chat activity presentation (#13246)
  fix(ui): make feed cards fully clickable (#13294)
  ci: activate shared PR dependency cache restores (#13302)
  test: remove cold executable reads from runner integrity deadlines (#13301)
  ci: reuse dependency caches without per-PR uploads (#13300)
  fix(ui): hide profile feedback flag on Cloud (#13292)
  feat(ui): refine dashboard cards, charts, and recent lists (#13269)
  fix: protect starting runs during overlapping deployments (#13285)
  fix: reliably interrupt and resume legacy message queues (#13275)
  ...

# Conflicts:
#	server/src/services/heartbeat.ts
2026-09-12 13:34:43 -05:00
DottaandPaperclip 10c1eff7be Merge current master and decision admission fixes from work-folders staging hardening
Co-Authored-By: Paperclip <noreply@paperclip.ing>

* codex/work-folders-staging-hardening-refresh: (25 commits)
  fix: retain saved messages while decisions are pending
  fix(server): stop reporting expected managed-cloud transients to Sentry (#13323)
  fix: promote review tasks when continuations start (#13318)
  fix: require explicit native completion reviews (#13314)
  fix(onboarding): make chief-of-staff hiring reliable (#13317)
  fix: fence native startup against cancellation (#13316)
  chore(skills): allow verified PR merges (#13313)
  feat: add experimental persistent agent chat (#13284)
  chore(lockfile): refresh pnpm-lock.yaml (#13279)
  fix(ui): improve mobile task spacing (#13304)
  fix(connections): repair and simplify Google Workspace setup (#13289)
  fix(ui): stabilize steered chat activity presentation (#13246)
  fix(ui): make feed cards fully clickable (#13294)
  ci: activate shared PR dependency cache restores (#13302)
  test: remove cold executable reads from runner integrity deadlines (#13301)
  ci: reuse dependency caches without per-PR uploads (#13300)
  fix(ui): hide profile feedback flag on Cloud (#13292)
  feat(ui): refine dashboard cards, charts, and recent lists (#13269)
  fix: protect starting runs during overlapping deployments (#13285)
  fix: reliably interrupt and resume legacy message queues (#13275)
  ...
2026-09-12 13:33:57 -05:00
Dotta af7f7e3ff9 Merge current master and decision admission fixes from work-folders runtime-hardening
Co-Authored-By: Paperclip <noreply@paperclip.ing>

* codex/work-folders-runtime-hardening-refresh: (25 commits)
  fix: retain saved messages while decisions are pending
  fix(server): stop reporting expected managed-cloud transients to Sentry (#13323)
  fix: promote review tasks when continuations start (#13318)
  fix: require explicit native completion reviews (#13314)
  fix(onboarding): make chief-of-staff hiring reliable (#13317)
  fix: fence native startup against cancellation (#13316)
  chore(skills): allow verified PR merges (#13313)
  feat: add experimental persistent agent chat (#13284)
  chore(lockfile): refresh pnpm-lock.yaml (#13279)
  fix(ui): improve mobile task spacing (#13304)
  fix(connections): repair and simplify Google Workspace setup (#13289)
  fix(ui): stabilize steered chat activity presentation (#13246)
  fix(ui): make feed cards fully clickable (#13294)
  ci: activate shared PR dependency cache restores (#13302)
  test: remove cold executable reads from runner integrity deadlines (#13301)
  ci: reuse dependency caches without per-PR uploads (#13300)
  fix(ui): hide profile feedback flag on Cloud (#13292)
  feat(ui): refine dashboard cards, charts, and recent lists (#13269)
  fix: protect starting runs during overlapping deployments (#13285)
  fix: reliably interrupt and resume legacy message queues (#13275)
  ...

# Conflicts:
#	packages/paperclip-runner/src/drivers/acpx/codex-runtime-adapter.test.ts
#	packages/paperclip-runner/src/drivers/acpx/codex-runtime-adapter.ts
#	server/src/services/heartbeat.ts
#	server/src/services/native-runtime/native-session-executor.test.ts
2026-09-12 13:33:56 -05:00
Devin FoleyandPaperclip d2e940f4c1 ci: run release Runner protocol and Rust checks in parallel (#13326)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Paperclip Cloud deploys verified images from merged source commits.
> - Cloud readiness waits for every release verification check.
> - Runner verification currently runs long TypeScript tests before Rust
checks.
> - These checks can run on independent runners with their own build
directories.
> - This PR runs them in parallel while preserving all checks and the
shared dependency cache.

## Linked Issues or Issue Description

Refs #13194. Related prior work: #13142 and #13259. A search found no
duplicate parallel release-check change.

**What existing behavior does this improve?**

Time from merge to Cloud source verification and deployment readiness.

**Current behavior**

Recent successful runs take roughly 13 minutes from merge to deployable.
In run 34705914878, Runner verification took 11m23s. Protocol tests
finished before Rust tests and API authority checks started.

**Proposed behavior**

Run protocol and Rust verification in two matrix jobs. Cloud readiness
still requires both jobs to pass.

**Reason and benefit**

Remove the serial dependency between independent checks. Expected
improvement is about 2–3 minutes on a typical cached run, until the
image build or server tests become the longest job. This is an estimate;
post-merge timing will confirm it.

**Breaking changes**

Individual release Runner job names gain a lane suffix. Cloud source and
readiness marker names stay the same. PR runner routing is unchanged.

## What Changed

- Split release Runner checks into protocol and Rust lanes. Keep every
constituent of `check:all` exactly once.
- Restore the existing Rust dependency cache in both lanes. Allow only
the Rust lane to save it after warming both build profiles.
- Add coverage and cache authorization regressions. Document the
parallel verification and single cache writer.

## Verification

- Passed 477 workflow and source-verification tests with `node --test
.github/scripts/tests/*.test.mjs
scripts/cloud-source-verification.test.mjs
scripts/__tests__/release-verify-workflow.test.mjs`.
- Passed `actionlint`, `git diff --check`, and the private AWS routing
regression suite.
- Passed local `pnpm -r typecheck` and the standalone `check:runner &&
check:api-authority` lane, including all 1,671 API tests before the
protocol lane had built TypeScript output.
- The broad local protocol run under Node 25 had four failures. The two
affected files passed under CI's Node 24.19.0: 67 passed, 6 platform
skips.
- Local `pnpm test:run` aborted when disk space ran out; local `pnpm
build` could not run afterward. These are local verification limits.
[Linux CI run
34710421424](https://github.com/paperclipai/paperclip/actions/runs/34710421424)
passed full typecheck, all grouped tests, native verification, build,
release dry run, and browser checks. Native protocol CI passed 1,986
tests, plus 1,671 API tests and the Rust suites.
- Latest-head Greptile is 5/5 with no open findings. All 33 current-head
checks are successful or intentionally skipped.

## Risks

- Uses one additional short-lived verification runner per release
verification. The existing AWS exact-master restriction remains in
place.
- The Rust lane warms debug dependencies so its cache save also serves
protocol tests. Both lanes always rebuild workspace code.
- A workflow regression could omit a check. The new coverage test
compares the matrix checks directly with `check:all`; Cloud readiness
depends on the complete reusable workflow.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, repository tools, and code
execution. The exact serving model ID and context window are not exposed
by this environment.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-12 11:33:20 -07:00
Dotta 42322c4c00 Merge current master and decision admission fixes from work-folders storybook
Co-Authored-By: Paperclip <noreply@paperclip.ing>

* codex/work-folders-storybook-refresh: (25 commits)
  fix: retain saved messages while decisions are pending
  fix(server): stop reporting expected managed-cloud transients to Sentry (#13323)
  fix: promote review tasks when continuations start (#13318)
  fix: require explicit native completion reviews (#13314)
  fix(onboarding): make chief-of-staff hiring reliable (#13317)
  fix: fence native startup against cancellation (#13316)
  chore(skills): allow verified PR merges (#13313)
  feat: add experimental persistent agent chat (#13284)
  chore(lockfile): refresh pnpm-lock.yaml (#13279)
  fix(ui): improve mobile task spacing (#13304)
  fix(connections): repair and simplify Google Workspace setup (#13289)
  fix(ui): stabilize steered chat activity presentation (#13246)
  fix(ui): make feed cards fully clickable (#13294)
  ci: activate shared PR dependency cache restores (#13302)
  test: remove cold executable reads from runner integrity deadlines (#13301)
  ci: reuse dependency caches without per-PR uploads (#13300)
  fix(ui): hide profile feedback flag on Cloud (#13292)
  feat(ui): refine dashboard cards, charts, and recent lists (#13269)
  fix: protect starting runs during overlapping deployments (#13285)
  fix: reliably interrupt and resume legacy message queues (#13275)
  ...

# Conflicts:
#	server/src/services/native-runtime/native-session-executor.test.ts
#	tests/runner-e2e/daytona-image.test.ts
2026-09-12 13:32:10 -05:00
DottaandPaperclip 28a06850f9 Merge current master and decision admission fixes from work-folders pi
Co-Authored-By: Paperclip <noreply@paperclip.ing>

* codex/work-folders-pi-refresh: (25 commits)
  fix: retain saved messages while decisions are pending
  fix(server): stop reporting expected managed-cloud transients to Sentry (#13323)
  fix: promote review tasks when continuations start (#13318)
  fix: require explicit native completion reviews (#13314)
  fix(onboarding): make chief-of-staff hiring reliable (#13317)
  fix: fence native startup against cancellation (#13316)
  chore(skills): allow verified PR merges (#13313)
  feat: add experimental persistent agent chat (#13284)
  chore(lockfile): refresh pnpm-lock.yaml (#13279)
  fix(ui): improve mobile task spacing (#13304)
  fix(connections): repair and simplify Google Workspace setup (#13289)
  fix(ui): stabilize steered chat activity presentation (#13246)
  fix(ui): make feed cards fully clickable (#13294)
  ci: activate shared PR dependency cache restores (#13302)
  test: remove cold executable reads from runner integrity deadlines (#13301)
  ci: reuse dependency caches without per-PR uploads (#13300)
  fix(ui): hide profile feedback flag on Cloud (#13292)
  feat(ui): refine dashboard cards, charts, and recent lists (#13269)
  fix: protect starting runs during overlapping deployments (#13285)
  fix: reliably interrupt and resume legacy message queues (#13275)
  ...
2026-09-12 13:31:40 -05:00
Dotta bb80a847c4 Merge current master and decision admission fixes from work-folders base
Co-Authored-By: Paperclip <noreply@paperclip.ing>

* codex/work-folders-base-refresh: (25 commits)
  fix: retain saved messages while decisions are pending
  fix(server): stop reporting expected managed-cloud transients to Sentry (#13323)
  fix: promote review tasks when continuations start (#13318)
  fix: require explicit native completion reviews (#13314)
  fix(onboarding): make chief-of-staff hiring reliable (#13317)
  fix: fence native startup against cancellation (#13316)
  chore(skills): allow verified PR merges (#13313)
  feat: add experimental persistent agent chat (#13284)
  chore(lockfile): refresh pnpm-lock.yaml (#13279)
  fix(ui): improve mobile task spacing (#13304)
  fix(connections): repair and simplify Google Workspace setup (#13289)
  fix(ui): stabilize steered chat activity presentation (#13246)
  fix(ui): make feed cards fully clickable (#13294)
  ci: activate shared PR dependency cache restores (#13302)
  test: remove cold executable reads from runner integrity deadlines (#13301)
  ci: reuse dependency caches without per-PR uploads (#13300)
  fix(ui): hide profile feedback flag on Cloud (#13292)
  feat(ui): refine dashboard cards, charts, and recent lists (#13269)
  fix: protect starting runs during overlapping deployments (#13285)
  fix: reliably interrupt and resume legacy message queues (#13275)
  ...

# Conflicts:
#	packages/paperclip-runner/runner/crates/runner-core/src/acpx_provider_backend.rs
2026-09-12 13:31:38 -05:00
Dotta 5637dc2ab6 Merge current master for work-folder acceptance
Co-Authored-By: Paperclip <noreply@paperclip.ing>

* origin/master: (24 commits)
  fix(server): stop reporting expected managed-cloud transients to Sentry (#13323)
  fix: promote review tasks when continuations start (#13318)
  fix: require explicit native completion reviews (#13314)
  fix(onboarding): make chief-of-staff hiring reliable (#13317)
  fix: fence native startup against cancellation (#13316)
  chore(skills): allow verified PR merges (#13313)
  feat: add experimental persistent agent chat (#13284)
  chore(lockfile): refresh pnpm-lock.yaml (#13279)
  fix(ui): improve mobile task spacing (#13304)
  fix(connections): repair and simplify Google Workspace setup (#13289)
  fix(ui): stabilize steered chat activity presentation (#13246)
  fix(ui): make feed cards fully clickable (#13294)
  ci: activate shared PR dependency cache restores (#13302)
  test: remove cold executable reads from runner integrity deadlines (#13301)
  ci: reuse dependency caches without per-PR uploads (#13300)
  fix(ui): hide profile feedback flag on Cloud (#13292)
  feat(ui): refine dashboard cards, charts, and recent lists (#13269)
  fix: protect starting runs during overlapping deployments (#13285)
  fix: reliably interrupt and resume legacy message queues (#13275)
  fix(cli): recover abandoned workspace build locks (#13288)
  ...

# Conflicts:
#	packages/db/src/migrations/meta/0273_snapshot.json
#	packages/db/src/migrations/meta/_journal.json
#	server/src/services/heartbeat.ts
#	tests/runner-e2e/runner.spec.ts
2026-09-12 13:30:21 -05:00
DottaandPaperclip c9021c6721 fix: require explicit native completion reviews (#13314)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Native runs report their outcome through paperclip_finish.
> - The server previously turned incomplete reports into human approval
requests.
> - Those requests could block a later successful run, even when no
person had requested review.
> - This pull request creates review cards only for explicit attention
requests and withdraws proven old fallback cards.
> - Agents receive useful completion feedback, while explicit approval
gates and task state protections remain in force.

## Linked Issues or Issue Description

Related: #13266 removed reviews caused by policy upgrades. This change
removes the separate completion fallback.

**What happened?**

An agent reported needs_review while waiting for checks without
requesting a human decision. Paperclip created a generic Native
completion review. A later successful report could not complete the task
because that old card remained pending.

**Expected behavior**

Ordinary low-risk work completes after a valid done report, a successful
run, and workspace finalization. Incomplete work stays with the agent.
Explicit approval requests remain visible and must be resolved.

**Steps to reproduce**

1. Complete a native run with needs_review and no attention requests.
2. Continue the task and submit a successful done report.
3. Observe that the old implementation leaves the task in review behind
a generic confirmation card.

## What Changed

- Require explicit attention requests to create native review cards.
Route each request independently and preserve pending or declined
decisions.
- Withdraw only pending system cards with matching old decision,
assessment, effect, contract, and prompt provenance. Preserve history
and explicit or answered requests.
- Reassess an affected current result without overwriting later task
edits, runs, contracts, or workspace failures.
- Return pending approval links and required actions through the
completion tool. Reject contradictory done reports and empty review
requests before accepting a result.
- Allow one corrective continuation for incomplete results, then expose
a recovery action.
- Update status fixtures, database regressions, runner tests, and the
completion contract documentation.

## Verification

- `pnpm -r typecheck` passed after merging current master.
- `pnpm build` passed after merging current master.
- The combined branch passed 89 completion and Agent Chat tests. Other
targeted tests passed: 170 external-chat and reconciliation tests; 50
runner-resume and control-plane tests; 13 arbiter tests; 7 chat delivery
tests; 21 runner completion and runtime-context tests.
- The full local test attempt exposed old review fixtures and a missing
fake-provider binary. The fixtures are fixed and the helper is built.
All affected suites pass in fresh reruns. The timing-sensitive Discord
test also passed on rerun.
- All latest-head CI checks passed, including build, typecheck, general
and serialized tests, runner verification, browser tests, and canary dry
run. Greptile is 5/5 with zero unresolved comments.

## Risks

- Cleanup changes existing pending cards. It requires exact system
provenance and only applies to low-risk agent-claim contracts. It does
not delete history or dismiss explicit requests.
- Status still commits after the turn and workspace finalization.
Completion feedback reports current constraints and does not claim an
early status commit.
- Incomplete reports now request a bounded corrective run instead of an
automatic approval. Repeated failures expose recovery.

## Model Used

OpenAI Codex, GPT-6, with repository inspection, code execution, and
test tools. The exact deployment identifier and context window size are
not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-12 13:00:04 -05:00
DottaandPaperclip 0e14c61da7 fix: fence native startup against cancellation (#13316)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Users can pause a task while its runner prepares to start.
> - Cancellation must prevent preparation from creating new execution
authority.
> - Native runtime selection could run after cancellation and leave an
unclaimed recovery coordinator.
> - Saved user messages then waited for recovery that had no eligible
worker.
> - This pull request fences startup and lets explicit user continuation
settle verified, unclaimed startup state.
> - Tasks can continue after cleanup while keeping provider ownership
and execution safeguards.

## Linked Issues or Issue Description

Refs #13285 for startup controller leases and #13270 for explicit
continuation and saved-message recovery. Related #13293 covers retained
processes that actually started; this change covers cancellation before
the native provider claim. Related #13315 covers legacy queued-message
delivery.

**What happened?**

Pausing a task during startup could cancel its heartbeat before native
runtime selection. Stale preparation then created an observed native
coordinator on the cancelled run. The coordinator had no provider result
or eligible recovery worker. A later Continue message stayed queued
indefinitely.

**Expected behavior**

Cancellation fences native startup. After verified cleanup, a newer user
message starts one fresh conversation turn. An unverified execution
keeps its hold and a clear explanation.

**Steps to reproduce**

1. Start a task with the native runner and delay startup preparation
before runtime selection.
2. Pause the task, then release preparation.
3. Resume the task and send Continue.
4. Before this fix, native selection can persist after cancellation and
block the saved message.
5. Repeat from persisted cancelled startup state after a server restart.

**Paperclip version or commit**

Reproduced against master at `586b5ec82` with isolated PostgreSQL
regression fixtures.

**Deployment mode**

Self-hosted server built from source, with Paperclip Runner.

## What Changed

- Serialize the cancellation fence and native runtime selection on the
run row. Revalidate the startup controller lease.
- Refresh the runtime before dispatching cancellation, and reject
terminal or cancelled runs at the native provider claim.
- Recognize never-claimed coordinators only after startup and
environment cleanup are verified. Reject process, provider, owner, and
conflicting launch evidence.
- Settle that coordinator atomically with a new authenticated user turn.
Preserve history, unknown outcomes, and attempt counts.
- Reuse the saved-message worker after restart and retain pause, budget,
approval, and ownership gates.
- Add startup, restart, duplicate-admission, and negative-proof
regressions. Document the rule.

## Verification

- All 687 tests pass across the complete heartbeat recovery, explicit
continuation, and native session executor suites on the rebased branch.
- Six focused race regressions also pass: cancellation before and after
native selection, Stop racing adapter registration, process termination
during a database failure, and a run finishing during cancellation.
- `pnpm -r typecheck` and `pnpm build` pass after rebasing on master at
`ab15aff39`.
- Greptile is 5/5 on `f3dea2ab27facdf0360b56172ebd3e5219e25538`, with no
open review threads. Policy and security checks pass.
- All 32 CI checks pass on the final head, including the full
server/workspace test matrix, all three browser shards, runner
verification, typechecks, build, and canary dry run. The two optional
Storybook jobs are skipped. [CI
run](https://github.com/paperclipai/paperclip/actions/runs/34697945514).
- Local full-suite limitation: the broad `pnpm test:run` attempt
reported two failures outside the changed area after unusually long test
durations (about 65 seconds for supporting skill-file saves and 933
seconds for setup-token login). Both cases passed isolated reruns, with
no code changes. The broad local run was stopped after CI completed
successfully; no clean full local-suite pass is claimed.

## Risks

Cancellation and startup overlap. The run and coordinator locks provide
the authority fence; cleanup and process evidence provide the
containment proof. Historical runs without sufficient evidence remain
blocked. A saved user message authorizes a fresh turn, not automatic
replay. No schema migration or dependency change.

## Model Used

OpenAI GPT-6 through Codex, using reasoning, repository inspection, code
execution, and tests. This session does not expose the exact backend
revision or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-12 11:39:36 -05:00
DottaandPaperclip ab15aff390 feat: add experimental persistent agent chat (#13284)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Conversations must use the same tasks, controls, and execution
history.
> - Users need an ongoing chat with an agent without managing task
properties.
> - Agents should clarify and plan work, then hand execution to assigned
project tasks.
> - This pull request combines the reviewed Agent Chat stack for one
squash merge.
> - The benefit is persistent conversation with normal task governance
and shared UI.

## Linked Issues or Issue Description

**Subsystem affected**

Task lifecycle, agent runtime tools, shared task UI, and browser/paid
runner tests.

**Problem or motivation**

Users need one persistent conversation with each agent. A separate chat
store or renderer would duplicate task behavior and bypass existing
controls.

**Proposed solution**

Use a task-backed chat per company, user, and agent. Reuse the task
composer and transcript. Clarify and plan in chat, then create assigned
project tasks with the relevant plan. Keep Agent Chat behind its own
disabled-by-default experimental setting.

**Roadmap alignment**

This implements the task-backed direction in [CEO
Chat](https://github.com/paperclipai/paperclip/blob/master/ROADMAP.md#-ceo-chat).
Related proposals: #2504 and #9693. Related request: #7981. The
maintainer requested one squash merge of the complete stack.

Consolidates the reviewed runtime
[#13281](https://github.com/paperclipai/paperclip/pull/13281), backend
[#13282](https://github.com/paperclipai/paperclip/pull/13282), and UI
[#13283](https://github.com/paperclipai/paperclip/pull/13283) layers
with this PR's E2E coverage. All four layers passed CI and received
Greptile 5/5 before consolidation. This PR targets master and includes
the complete feature.

## What Changed

- Add personal canonical chat tasks with ordinary company visibility,
immutable identity, idempotent first sends, and an idle waiting state.
- Process `/new` in queue order. Preserve history, release a chat pause,
and fence old provider context and delayed writes.
- Keep chat lifecycle rules across recovery, finalization, assignment,
task lists, and rollups.
- Support research and plan revision in chat. Hand plans to ordinary
assigned project tasks before execution starts. Reject new chat
subtasks.
- Add repository-aware project creation and discovery tools, including
multiple repository IDs and GitHub URLs, authorization, idempotency, and
durable project-created cards.
- Reuse task UI components for chat, with starred/recent agent
navigation and a separate `enableAgentChat` experimental flag.
- Add deterministic browser tests and 24 paid chat cells across four
Codex/Claude profiles, with validated reports and screenshots.
- Integrate current master recovery, controller lease, queued-message,
and task UI changes. Gate chat interruption and deferred promotion on
ownership/feature policy. Guarantee lease renewal and active controls
are stopped even if teardown fails.
- Preserve master's migration 0273 and generate chat migration 0274 with
idempotent replay for development databases.

## Verification

- Prior exact heads of all four PRs passed Linux CI, including build,
typecheck, general/serialized tests, and browser E2E. Each had Greptile
5/5 and no unresolved findings.
- Integrated local verification passed: full repository typecheck and
production build, Storybook build, token gates, 340 focused UI tests,
all 20 deterministic chat browser tests, two migration replay tests, 88
focused chat/queue/native/controller tests, and provider/session
regressions including real lease expiry. These include the three
lifecycle regressions for the final admission/teardown fixes; server
typecheck also passes. Current head
`1268eda16cc2af892055917e7292f068820be135` has Greptile 5/5 with no
unresolved findings and passing security scans. All final-head CI gates
passed: build, full Runner verification, typecheck/release registry,
canary, all general/serialized test shards, and all browser E2E shards
([CI
run](https://github.com/paperclipai/paperclip/actions/runs/34696739927)).
Local PostgreSQL startup contention required serialized retries; skipped
fixtures do not count as passing coverage.
- The earlier paid campaign passed all 24 chat cells and retained 32
screenshots:
[report](https://d1p6rlowie26tp.cloudfront.net/runner-e2e/campaigns/gha-34648511170-1/index.html?report=agent-chat#suite-agent-chat).
It tested `abacbdfd2f660709ec37312cdb758284c8399d04`; it is prior
evidence, not a paid run of this integrated head.
- Manual check: enable Agent Chat in Experimental settings, open an
agent, clarify and revise a plan, then hand off to an assigned project
task. Stop a reply, send `/new`, and verify fresh context with retained
history. Disable the setting and verify agent shortcuts/new chat turns
are blocked.

## Risks

- Queue/session integration can affect retries and delayed writes. Tests
cover ownership, cancellation, reset boundaries, idle recovery, and
ordinary task behavior.
- Migration 0274 adds conversation fields and constraints. Replay is
idempotent and preserves existing development chat history.
- This combines the previously reviewed stack at the maintainer's
request. Agent Chat remains off by default and is separate from
Conference Room.

## Model Used

OpenAI Codex, GPT-6 Astra (`gpt-6-astra`), with reasoning, code
execution, browser tools, and parallel review. The exact context-window
size is not exposed in this session. Codex and Claude also ran as test
subjects in the linked paid campaign.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-12 08:56:04 -05:00
DottaandPaperclip 8f40b4ad4b fix(connections): repair and simplify Google Workspace setup (#13289)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - App connections give agents controlled access to external services.
> - Managed Google Workspace methods depend on profiles enabled for each
Paperclip instance.
> - The catalog used those profiles, but connection creation used static
availability and rejected enabled connections.
> - Switching capabilities also reset personal ownership to company-wide
ownership.
> - This PR uses the same availability rules for catalog and setup, and
preserves supported ownership choices.
> - Paperclip is the default Google authentication method. A small link
opens custom OAuth settings when needed.
> - Local and cloud instances can start the selected Workspace
connection without broadening its audience.

## Linked Issues or Issue Description

**What happened?**

A fresh enrolled instance showed managed Google Workspace apps as
available. The issue was first found with Gmail. Selecting Continue to
sign in returned HTTP 422 with “This app does not have an available
connection method.” Changing from Read & create drafts to Read only also
reset Just me to company-wide ownership.

**Expected behavior**

Start Google authorization for an enabled profile. Keep personal
ownership when the selected method supports it. Reject profiles that the
instance cannot use.

**Steps to reproduce**

1. Start a fresh source test-drive and enroll the instance with
Paperclip Cloud.
2. Open Apps and select Gmail.
3. Select Just me and choose the agents that can use the connection.
4. Continue to setup and select Read only.
5. Go back to inspect ownership, then continue to sign in.

**Paperclip version or commit**

Reproduced on master commit 250deab910.
The fix is rebased onto current master.

**Deployment mode**

Local source test-drive. Regression tests also cover authenticated cloud
mode, HTTPS callbacks, and instance credentials supplied through
environment variables.

Related PRs: #13098 preserves task context through enrollment and OAuth.
#12619 introduced the managed Google Workspace rollout. This PR fixes
availability validation and ownership changes in that setup flow.

## What Changed

- Share instance-specific managed-method filtering between catalog
discovery and connection creation.
- Keep stored managed methods recognizable during callback, refresh, and
revoke.
- Preserve credential ownership when switching to another method that
supports it.
- Replace the Google authentication radio cards with a small Use your
own Google OAuth app link. Reveal custom fields only when selected, with
a Use Paperclip instead link to return. Associate the toggle with its
labeled field region for screen readers.
- Test all 16 managed Google Workspace profiles in local and
authenticated cloud modes, including cloud environment credentials and
unavailable profiles.
- Test ownership across all nine Workspace app cards, including
capability changes, authentication changes, and enrollment return.
- Document the shared availability and ownership behavior.

## Verification

- All 135 setup tests pass after the UI change. The focused connector
and service suites also passed before this presentation-only change.
- The expanded Workspace matrix includes 32 local/cloud callback cases,
16 cloud environment-identity cases, 32 unavailable-profile cases, and
18 UI ownership cases.
- `pnpm -r typecheck`, `pnpm build`, and `pnpm check:token-gates` pass.
UI typecheck and token gates also pass on final commit `2071002d6`.
- Browser tests cover Gmail, Calendar, Chat, Docs, Drive, People,
Sheets, Slides, and Workspace Search in an isolated source test-drive.
- Each app reaches Google sign-in with its expected read-only scopes.
Personal ownership persists after capability or authentication changes.
Chat also resumes its saved setup with read-only access intact.
- Browser verification of the new layout: custom fields start hidden,
the small link reveals them, and keyboard activation of Use Paperclip
instead hides them. Personal ownership and read-only selection persist.
- Google consent was not granted. Live provider reads and a deployed
cloud instance remain unverified.
- The local repository-wide suite was stopped at the maintainer's
request. Full CI verification passed for final commit `2071002d6`: 31
successful checks, two optional Storybook checks skipped. This includes
repository tests, browser E2E, typecheck, build, and canary dry run.
Greptile reviewed that commit at 5/5 with no outstanding findings.

## Risks

- The shared availability helper affects all managed connectors. It
filters methods by the instance's advertised profiles and does not
mutate the static catalog.
- Stored connections can resolve their managed method after availability
changes. The broker still enforces current access during authorization
and refresh.
- No database migration or provider scope change is included.

## Model Used

OpenAI Codex (GPT-6), with reasoning, code editing, shell tools, and
browser automation. The session does not expose an exact runtime model
ID or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-12 07:57:48 -05:00
Devin FoleyandPaperclip 44dde2dec4 ci: reuse dependency caches without per-PR uploads (#13300)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Cloud releases wait for source verification before deployment.
> - That verification reuses compiled Rust dependencies to finish
sooner.
> - PR jobs save large pnpm stores under separate merge refs and
different lockfile keys.
> - Those copies compete with master build caches for the repository's
10 GB cache limit.
> - This PR makes PR dependency caches restore-only and reuses
master-compatible keys.
> - A separate pin update will activate the reviewed workflow.

## Linked Issues or Issue Description

**What happened?**
PR merge refs accumulated roughly 700 MB copies of the same pnpm store.
Master Rust caches disappeared, and Cloud readiness run
[34656098157](https://github.com/paperclipai/paperclip/actions/runs/34656098157)
rebuilt dependencies after cache misses. The repository currently has a
10 GB limit. GitHub rejected a request for 50 GB; that setting needs
separate organization/billing access.

**Expected behavior**
PR jobs should reuse downloaded packages without evicting post-merge
compilation caches through duplicate uploads.

**Steps to reproduce**
1. Run several PRs while the checked-in lockfile needs policy
regeneration.
2. Compare the setup-node keys in PR jobs and master jobs.
3. List Actions caches by ref, key, and archive size. The PR keys repeat
across merge refs.

**Paperclip version or commit**
f12b647ae, before this change.

**Deployment mode**
GitHub Actions, with GitHub-hosted and allowlisted AWS PR runners.

Refs #13267 (empty pnpm store prevention). Searched open issues and PRs
for pnpm cache duplication and found no duplicate implementation. This
change leaves the paused capacity documentation PR #13280 alone.

## What Changed

- Replace setup-node cache writes with pinned `actions/cache/restore` in
all seven PR install job definitions.
- Restore against the checked-in lockfile before downloading the
regenerated policy artifact. Keep every install frozen against that
artifact.
- Allow an OS/architecture-specific pnpm fallback and disable automatic
setup-node caching.
- Remove dependency-store caching from the resolution-only policy job.
- Add eight regression tests, update the existing stacked-lockfile cache
assertion, and document cache behavior and storage settings.

## Verification

- Passed 505 workflow, routing, cache, and source-verification tests:
`node --test '.github/scripts/tests/*.test.mjs'
scripts/__tests__/e2e-shard.test.mjs
scripts/__tests__/run-vitest-stable-shard.test.mjs
scripts/__tests__/release-verify-workflow.test.mjs
scripts/cloud-source-verification.test.mjs`.
- Passed `actionlint .github/workflows/pr-trusted.yml` and `git diff
--check`.
- The AWS routing gate is unchanged. Author, event sender, and rerun
actor must still be allowlisted.
- This definition PR does not change the active `pr.yml` pin. After
review and merge, authorize its immutable merge SHA additively and
activate it in a separate PR. Verify a populated restore and no cache
uploads in an allowlisted PR.
- All 32 checks passed or were intentionally skipped on
`44b31eca590f61b75cae646de43c491b6c4deae7`, including full native Runner
verification, application build, server/workspace tests, and browser
shards. Current-head Greptile is 5/5 with no findings. No application
code changes in this PR.

## Risks

- New dependencies present only in a PR may download again on each run
until master saves a cache containing them. Frozen installation remains
the source of dependency resolution.
- Missing or expired stores fall back to normal package downloads.
- Existing PR copies remain until expiry or a separate targeted cleanup.
No cache entries are deleted here.
- The workflow only takes effect after the separate immutable pin
rotation. Storage billing settings are not changed by this PR.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, repository tools, and code
execution. The exact serving model ID and context window are not exposed
by this environment.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-11 17:31:15 -07:00
Nicky LeachandPaperclip dbf5ea432d fix: protect starting runs during overlapping deployments (#13285)
## Thinking Path

> - Paperclip controls agent work across service deployments.
> - A run can provision a remote sandbox before a process or invocation
event exists.
> - Each container previously treated its own missing process handle as
proof that the run was orphaned.
> - Overlapping deployments could therefore fail a run owned by another
container.
> - This pull request records and renews a controller lease before
provisioning.
> - A recovery worker must revoke an expired owner before it finalizes
the run.

## Linked Issues or Issue Description

Merged PR #13272 records startup adapter identity and restores explicit
user continuation. This PR adds controller ownership on top of current
master. Refs #7997 and #10442 for related replica and ownership
problems. Related #13138 addresses silence and detached local processes;
this change does not infer death from silence.

**What happened?**
During an overlapping hosted service deployment, a new container reaped
a legacy conversation run that another container was provisioning. The
run had no PID or adapter invocation yet.

**Expected behavior**
A live controller keeps its run. After controller loss, one recovery
worker takes cleanup authority and the old controller cannot dispatch
further work.

**Steps to reproduce**
Claim a legacy run in controller A. Start controller B against the same
database before A finishes provisioning. Run the startup reaper in B.

**Paperclip version or commit**
Observed on `663c44cb2b9c28336d38d0b4a6971f4f1964bce6` in a hosted
Railway deployment with a Daytona environment.

## What Changed

- Add nullable controller boot ID, lease deadline, and execution stage
columns. Claim ownership in the queued-to-running update.
- Renew ownership independently of run output. Abort and reject dispatch
if renewal fails.
- Serialize reaper revocation against renewal. Let unfinished recovery
claims expire after a restart.
- Restrict graceful shutdown to legacy runs owned by the current
controller.
- Hand ownership back to the existing native coordinator when runtime
selection becomes native.
- Add twelve database regressions and document the lease contract.
Update the task-drain regression to require controller expiry before
reaping.

## Verification

- `pnpm exec vitest run
server/src/services/legacy-controller-lease.test.ts
server/src/__tests__/heartbeat-task-drain-admission-release.test.ts`: 14
passed after rebasing onto master (`f12b647ae`).
- Queue-interruption regressions in
`heartbeat-process-recovery.test.ts`: 2 passed after preserving the new
cleanup promotion from #13275.
- `pnpm --filter @paperclipai/server exec tsc --noEmit`: passed after
rebuilding runner TypeScript outputs for the updated master. Broad local
tests are omitted at the maintainer’s request; CI owns broad coverage.

- Latest-head CI passed on `f255e8e4d5ab2b24b12638a02434e6aa8a2285c5`:
[run
34658248569](https://github.com/paperclipai/paperclip/actions/runs/34658248569).
All test shards, browser suites, typecheck, build, canary, and security
checks passed. Greptile is 5/5 with no unresolved review threads.

## Risks

- Additive, idempotent migration; historical rows retain the previous
recovery behavior.
- Database unavailability aborts new dispatch rather than permitting an
unfenced controller to continue.
- Lease expiry is permission to clean up, not evidence that remote
inference stopped. Follow-up PRs add persistent cleanup and automatic
continuation.
- Mixed-version deployment still includes old binaries whose reapers do
not understand controller leases.

## Model Used

OpenAI GPT-6 through Codex, using reasoning, repository inspection, code
execution, and test tools. The precise backend revision and
context-window size are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-11 16:55:44 -07:00
DottaandPaperclip f12b647ae8 fix: reliably interrupt and resume legacy message queues (#13275)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - A task can collect more messages while its agent works.
> - Legacy runners must stop the active process before they can receive
those messages.
> - The old Interrupt action cancelled the run but could leave the queue
idle and hidden.
> - Codex could also classify a cancelled run as successful or start a
fresh process after cancellation.
> - This pull request joins cancellation, preserves the provider
session, and dispatches the current queue after cleanup.
> - The benefit is reliable interruption with the saved message order,
edits, and deletions.

## Linked Issues or Issue Description

**What happened?**

Interrupt could strand a legacy message queue. The UI could hide pending
messages after the run stopped. A Codex signal exit could race the
cancellation write. A stale session warning could also trigger a fresh
process after an interrupted resume.

**Expected behavior**

Interrupt stops the active turn and sends the remaining messages once,
in their saved order. Deleted messages stay deleted. An interrupted
Codex turn keeps its session and does not restart itself.

**Steps to reproduce**

1. Assign a task to a legacy Codex agent that runs a long command.
2. Queue three messages. Edit one, discard another, and move the last
message first.
3. Click Interrupt in the queue.
4. Repeat the interruption while the resumed session runs another
command.

Related work: Refs #13160, which moves native queue steering into the
wake-queue module. This change fixes legacy interruption and keeps
native steering unchanged.

## What Changed

- Add a revision-checked, company-scoped endpoint for legacy queue
interruption.
- Promote only the requested queue after the provider stops and releases
its lease. Retry its persisted interrupt intent from the scheduler after
a promotion error or server restart.
- Keep pending legacy queues visible after a run stops. Use server state
for the interrupt result.
- Serialize owned process cancellation before classifying the adapter
result. Preserve late session and log metadata. Acknowledge cancellation
only when an actual process or process group was owned; scheduler
placeholders retain their normal release policy.
- Send Ctrl-C to legacy Codex. Prevent missing-session fallback once the
session has started.
- Add cancellation race, multi-actor queue order, durable retry, resume
fallback, and stale request regression tests. Document the behavior.

## Verification

- Real browser tests passed with legacy Codex CLI and ACP engines, using
Codex 0.153.4 and gpt-5.6-sol.
- All three automated ACP browser scenarios passed locally: immediate
Interrupt delivery, no replay of an unfinished write, and pause
requiring Resume. Updated the old test expectation that required a
separate “go” after Interrupt.
- Browser tests covered queued edits, deletion, reordering, deleting the
final message, and repeated interruption.
- Two consecutive CLI interrupts kept one provider session. Both stopped
processes exited. The final message arrived once.
- `pnpm -r typecheck` passed.
- `pnpm check:token-gates` passed.
- All 346 post-review scheduling, recovery, queue-route,
archived-company, worktree-suppression, and stale-queue regression tests
passed.
- All 318 process-recovery and durable-chat tests passed after the final
cancellation guard.
- Codex adapter, queue UI, issue-page, and OpenAPI contract tests
passed.
- `pnpm build` passed.
- Full local suite coverage completed with
`PAPERCLIP_IN_WORKTREE=false`, using the stable runner and its CI
shards: 618 general server suites, all 145 serialized server suites, and
all workspace groups. Every failing suite passed a targeted rerun after
the fixes, rebuilding the native test fixture, correcting macOS
temporary-path setup, or retrying setup/timing failures. Existing skips
remain.
- The original monolithic run reported failures before the final fixes;
its failed suites were rerun rather than rerunning all 618 suites again.
The final process-recovery/durable-chat regression run passed all 318
tests.
- All CI checks passed for `e30eaf787f23a5511a3cb3cdb5abbccab9ed001d`:
[run 34654820774, attempt
2](https://github.com/paperclipai/paperclip/actions/runs/34654820774/attempts/2),
including typecheck, build, all test shards, E2E, and canary. The
signoff and Cursor sandbox tests each hit a timeout in the initial
attempt; both suites passed locally, and both failed shards passed their
single CI rerun. All three corrected ACP browser scenarios passed in CI.
- Greptile reviewed `e30eaf787f23a5511a3cb3cdb5abbccab9ed001d`: 5/5, no
open review threads.

## Risks

Cancellation order affects local adapters. The tests cover signal exits,
graceful exits, adapter exceptions, termination errors, and cancellation
write errors. Embedded adapters keep their cancellation controls.
Ordinary run cancellation and task pause keep their distinct queue
policies. No database migration is required.

## Model Used

OpenAI Codex, GPT-6, with reasoning, tool use, browser testing, and code
execution. The exact serving model ID and context-window size are not
exposed in this session. The live test runner used OpenAI gpt-5.6-sol.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-11 18:26:59 -05:00
DottaandPaperclip 30c63af0e6 fix(cli): recover abandoned workspace build locks (#13288)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The test-drive command starts an isolated instance for local
testing.
> - Source startup builds shared packages before it starts the server.
> - An interrupted build can leave an empty lock directory.
> - Later starts wait without output and fail after 60 seconds.
> - This pull request recovers abandoned locks and shows build progress.
> - Local testing can start again without manual lock removal.

## Linked Issues or Issue Description

**What happened?**

`pnpm paperclipai test-drive` stopped at “Starting Paperclip server…” in
a source checkout. A leftover plugin build lock caused a silent
60-second wait and then a timeout.

**Expected behavior**

Startup should recover an abandoned build lock. It should show when it
waits for a live build. An interrupted or failed build should not leave
partial output that the next start accepts as complete.

**Steps to reproduce**

1. Leave an empty `node_modules/.cache/paperclip-plugin-build-deps.lock`
directory after an interrupted build.
2. Make the shared or plugin SDK build output out of date.
3. Run `pnpm paperclipai test-drive --api-key placeholder --no-browser`
with a fresh data directory.
4. Observe the silent wait at server startup.

**Paperclip version or commit**

Reproduced at `2083bf6f9`.

**Deployment mode**

Local source checkout with an isolated embedded PostgreSQL instance.

Related work: #12894 added test-drive. #12898 restored its credential
inputs. Neither change handles abandoned workspace build locks. No
duplicate fix was found.

## What Changed

- Publish a lock directory with an owner record in one rename.
- Recover locks after their owner and compiler exit. Recover legacy
empty locks after two minutes.
- Keep the lock until the compiler stops on SIGINT or SIGTERM.
- Print build and lock-wait progress.
- Record source, dependency, compiler-config, and output content
fingerprints only after a successful compile. Recover partial output
even when modification times are unchanged.
- Add 12 process-level regression tests and update the development
guide.

## Verification

- `node --test scripts/__tests__/ensure-plugin-build-deps.test.mjs`: 12
tests pass.
- `pnpm exec vitest run --config cli/vitest.config.ts
cli/src/__tests__/test-drive.test.ts`: 32 tests pass.
- `pnpm --filter paperclipai typecheck`: passed.
- `pnpm --filter paperclipai build`: passed.
- Live smoke tests: fresh startup and startup with an abandoned lock
both reach ready state. The API and UI respond. The command creates the
company and CEO and enables worktree execution. Test instances stop
cleanly.
- Full repository `pnpm -r typecheck` and `pnpm build`: passed.
- Full Vitest suite coverage completed using the repository-supported
server, chat, workspace, and serialized shards. The initial local run
needed the fresh-worktree fake native-provider binary built and focused
reruns for port/socket races and load-related timeouts; all affected
tests passed on rerun. Suites skipped by fail-fast exits were run
separately and passed. The initial serial `pnpm test:run` was stopped in
favor of these shards.
- Greptile: 5/5 on commit `8b5a790c2af06a52b5dc76e5f52331966df990b8`,
with all review threads resolved.
- CI: 31 checks passed and two Storybook checks intentionally skipped.
The initial workspace and browser jobs were interrupted by runner
shutdowns; both passed on the second attempt. Build, typecheck, canary
dry run, all general and serialized tests, all browser shards, security
checks, and final verification summaries are green. [CI
run](https://github.com/paperclipai/paperclip/actions/runs/34654730783)

## Risks

- This changes shared source-build locking for the CLI and plugin SDK
commands.
- Legacy locks have no owner identity. Recovery uses a two-minute age
threshold for empty legacy directories.
- Startup reads and hashes source and output files to verify the build
cache. Identical direct builds reuse the cache. Changed or partial
output requires a rebuild.
- A reused process ID can delay recovery. Live owner or compiler
processes keep their lock.
- No database, API, or UI contract changes.

## Model Used

OpenAI GPT-6 in Codex, with reasoning, tool use, code execution, and
process-level testing. A more specific API model identifier and
context-window size are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` OR (b) described the issue in-PR following the relevant issue
template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-11 18:25:42 -05:00
DottaandPaperclip a38ccf9972 fix: retry transient continuation admission locks (#13290)
## Thinking Path

> - Paperclip manages AI agents and the tasks that they execute.
> - The run scheduler checks continuation authority before it starts a
provider.
> - This check uses database locks to order execution against
conversation closure.
> - A short lock conflict could fail a valid user follow-up before the
provider started.
> - This pull request retries the admission transaction after the locks
are released.
> - Valid work can start after normal contention, while closure and
cancellation still stop execution.

## Linked Issues or Issue Description

Refs #13038. Related continuation work: #13270 and #13239.

**What happened?**

A user comment started a run through the automation queue. Its source
records and admission marker were valid. A database lock conflict at
dispatch caused `chat_control_recovery_proof_unresolved` and stopped
automatic recovery. The provider received no work.

**Expected behavior**

Retry short database lock conflicts before failing admission. Read
current ownership and conversation-close evidence on each attempt. Do
not retry provider execution.

**Steps to reproduce**

1. Queue a user follow-up through the automation transport.
2. Hold the task row lock in a separate transaction at the dispatch
boundary.
3. Release the lock after 250 ms.
4. Before this fix, the run fails before provider dispatch. With this
fix, the run passes admission once the lock is released.

**Paperclip version or commit**

Reproduced on base commit `1c4bcff2b`. Disabling the new retry
reproduces the original error in the regression test.

**Deployment mode**

Self-hosted server with PostgreSQL. Regression tests use embedded
PostgreSQL.

## What Changed

- Retry rolled-back admission transactions after lock conflicts, with up
to 50 waits of 100 ms.
- Keep queue claims nonblocking. Keep provider dispatch outside the
retried transaction.
- Recheck current run state and committed close evidence after every
conflict.
- Explain persistent database contention in the exhausted admission
error.
- Add real database contention tests and bounded retry tests. Document
the behavior.

## Verification

- `pnpm exec vitest run
server/src/__tests__/heartbeat-process-recovery.test.ts
server/src/services/chat-control-admission-retry.test.ts`: 273 passed.
This includes task, wake, and run locks, the native runner, close/cancel
races, unrelated failures, and retry exhaustion.
- Regression proof: disabling retries makes the user-follow-up test fail
with `chat_control_recovery_proof_unresolved`.
- `pnpm -r typecheck`: passed.
- `pnpm build`: passed.
- `pnpm test:run`: stopped after all equivalent CI server/workspace
shards passed. The local run exposed a missing `fake-codex-app-server`
fixture binary in the fresh worktree; after `pnpm --filter
@paperclipai/paperclip-runner run build:rust`, the complete affected
`native-session-resume.test.ts` suite passes (37 tests).
- Greptile: 5/5, no findings, on commit `c974a496a`.
- CI: all 31 checks passed on commit `c974a496a`, including all
server/workspace test shards, browser tests, typecheck, runner
verification, build, and the release dry run. [CI
run](https://github.com/paperclipai/paperclip/actions/runs/34654770074).

## Risks

- A contended dispatch can wait through 50 short delays, plus
transaction time.
- Persistent contention still fails closed after the retry budget.
Invalid source evidence fails without retrying admission.
- No schema, permission, provider retry budget, or queue-claim behavior
changes.

## Model Used

OpenAI Codex, GPT-6. The exact deployed model ID and context-window size
are not exposed in this session. Used reasoning, repository inspection,
code editing, and command execution.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-11 18:11:44 -05:00
DottaandPaperclip 9031516a7e fix: recover legacy Daytona startup failures from task and inbox (#13272)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Legacy conversation adapters can run in Daytona sandboxes.
> - A server restart during provisioning can occur before the invocation
event exists.
> - Recovery then lacks the old adapter identity and leaves a hold that
ordinary user retries cannot clear.
> - A remote launch can also fail when its host relay looks for Node in
the sandbox PATH.
> - This pull request records the adapter at claim time and restores
explicit user continuation after verified cleanup.
> - Users can recover from the task or inbox while the failed run and
uncertain action history remain intact.

## Linked Issues or Issue Description

Refs #13237, #13239, #13254. Those changes cover recorded conversation
runs, native user continuation, and explicit remote Stop. This change
covers legacy failure before `adapter.invoke` and exact task/inbox
Retry.

Refs #9771 for overlapping generated-command quoting. This change also
supplies the absolute host Node executable. Refs #13163 and #13264 for
the separate native restart and retained-workspace work.

**What happened?**
A legacy Daytona run interrupted during provisioning became
`process_lost` without an invocation event. Recovery preserved an
execution hold, and Retry or a new task reply could not resume it.
Cleanup could also run before the Daytona plugin was ready. On a macOS
host, a subsequent ACP relay launch failed with `env: node: No such file
or directory` because the remote launch environment did not contain the
host Node path.

**Expected behavior**
An interrupted conversation can continue after its previous execution
stops. Explicit Retry and new user replies should start a fresh turn
with the task history. Cleanup failures must remain visible and
recoverable. The host relay must use the host Node executable.

**Steps to reproduce**
1. Use a legacy Claude adapter with a Daytona environment.
2. Interrupt the server after it acquires the sandbox lease and before
it records `adapter.invoke`.
3. Restart and inspect the task hold.
4. Retry from the task or inbox, or send a new task reply.
5. Confirm the old sandbox has stopped and one new response arrives.

**Paperclip version or commit**
Reproduced from master at `3bafac12f796fbea02e609e1074a9639f872e9c4`.
The branch is rebased on `51b0e01ea`, including #13261 and #13270.

**Deployment mode**
Built from source on macOS with a real Daytona sandbox and the legacy
Claude ACP adapter.

## What Changed

- Count new browser specs with the scheduler's median duration in the
shard-balance check. This fixes a false policy failure after new specs
arrive from both branches. The balance threshold is unchanged.

- Persist server-owned adapter identity in the queued-to-running claim
before provisioning starts.
- Wait for provider plugin startup before restart cleanup. Keep failed
cleanup leases as active ownership blockers.
- Admit exact board retries and new user comments after verified
termination. Retain the old run, task history, approvals, and unknown
action outcomes.
- Adopt repeated Retry requests. Permit one scoped cleanup attempt per
explicit user Retry after the automatic limit, with an activity record.
A later user Retry can recover after a transient provider failure;
automatic attempts remain capped.
- Resume replies deferred during cleanup, including historical legacy
startup failures.
- Launch the host ACP relay through the absolute host Node executable.
- Add a task-level Retry button and return actionable blockers when
retry admission is refused.
- Add database regressions and three browser recovery journeys. Exclude
installed third-party dependency skills from the shipped-skill audit.

## Verification

- Current head: `d23c84181`, rebased on `51b0e01ea`. Conflict resolution
retains the saved-message recovery, local stop receipts, and wait
reasons from #13270 alongside exact legacy Retry support.
- Real Daytona: interrupted the server after lease acquisition and
before adapter invocation. Restart cleanup confirmed provider
termination. Task Retry cleared a seeded historical hold and a real
Claude agent returned `Recovery verified.` in the task. Removed the
disposable sandbox and environment after testing.
- All three browser recovery journeys passed again after the final
rebase. Task Retry, Inbox Retry, and a new reply each produced one fresh
successor, completed the task, preserved the failed run, and retained
the answer after reload.
- All 29 e2e/server shard-partition tests passed. The balance check now
uses the scheduler's median fallback for unmeasured specs, with the same
balance threshold.
- Server typecheck passed after rebuilding the generated runner
dependencies. The combined recovery/route run passed 136 of 137 tests.
Its remaining route test timed out during the first cold module import
at its explicit 10-second limit; an isolated rerun reproduced that
timeout and passed the other 51 route cases. The complete CI suite
passed on this head. The same route file passed all 52 cases in CI,
including the first cold import in 7.5 seconds.
- Before the final rebase, recursive typecheck, full build, UI token
gates, 132 targeted server tests, and the complete [CI
workflow](https://github.com/paperclipai/paperclip/actions/runs/34650004085)
passed. The subsequent CI failure was the shard-balance accounting
mismatch fixed here.
- Greptile reviewed `d23c84181` at 5/5 with no outstanding actionable
findings. The complete [current CI
workflow](https://github.com/paperclipai/paperclip/actions/runs/34653327949)
passed on attempt 2. All test, typecheck, build, and canary jobs passed
on the first attempt. Docker setup timed out fetching BuildKit from
Docker Hub; retrying that job and its dependent aggregate succeeded.

## Risks

- Recovery admission changes executable authority. Company, task, agent,
user, approvals, process ownership, and provider termination checks
remain required.
- Explicit continuation starts a fresh conversation with history. It
does not certify unknown external action outcomes or rerun
non-conversation adapters automatically.
- Changing task status alone does not clear an execution hold. The task
now offers an explicit Retry action.
- Historical adapter claims and invocation events take precedence over
current agent settings. Known process or webhook runs retain their hold.
Pre-upgrade rows with no adapter evidence may receive only a new
explicit user turn after termination proof; they do not become eligible
for automatic replay.
- No schema migration or sandbox-image change is required. This branch
has not been deployed to production.

## Model Used

OpenAI GPT-6 through Codex, with repository inspection, code execution,
browser automation, and test execution. The exact deployment model ID
and context window are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [ ] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-11 18:08:14 -05:00
Devin FoleyandPaperclip 37d7dfb0e3 ci: allow dependency changes in cloud eval verification (#13286)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Cloud deployment requires source verification for the exact merged
commit.
> - Contributor PRs leave lockfile updates to a separate bot PR.
> - Most release checks can refresh an outdated lockfile while
installing dependencies.
> - Two Runner checks still require a frozen lockfile and fail after
dependency changes.
> - This PR gives those checks the same install policy as the other
release checks.
> - A valid dependency change can become deployable without waiting for
another merge.

## Linked Issues or Issue Description

Refs #13257. The dependency change in #13256 exposed this gap. The
separate lockfile update is #13279. Related #12115 addresses the bot PR
check trigger; this PR fixes exact-source cloud verification itself.

**What happened?**

[Cloud readiness for
2083bf6](https://github.com/paperclipai/paperclip/actions/runs/34651761811)
failed in the Runner scorer and chaos jobs with
`ERR_PNPM_OUTDATED_LOCKFILE`. The commit added `svix` to server
dependencies. The tracked lockfile still describes the previous
manifest. The other release checks install with `--no-frozen-lockfile`.

**Expected behavior**

Every source check installs and tests the same checked-out commit. A
pending bot lockfile PR must not block cloud readiness.

**Steps to reproduce**

1. Check out master commit 250deab, which retains the manifest/lockfile
mismatch.
2. Run `pnpm install --ignore-scripts --frozen-lockfile`. It fails with
the same outdated-lockfile error.
3. Run `pnpm install --ignore-scripts --no-frozen-lockfile
--resolution-only`. It succeeds.
4. Restore the generated lockfile. This PR does not commit it.

## What Changed

- Use `--no-frozen-lockfile` in the release Runner scorer job.
- Use the same option in the reusable Runner chaos workflow.
- Document why cloud source checks allow a job-local lockfile refresh.
- Update the existing Runner scorer workflow assertion to match its
install policy.

## Verification

- All 457 workflow tests pass across `.github/scripts/tests/*.test.mjs`
and `scripts/__tests__/release-verify-workflow.test.mjs`.
- `actionlint` passes for both changed workflows.
- Reproduced the frozen install failure against the real tracked
manifest and lockfile. The refresh command passes in 4.6 seconds.
- `git diff --check` passes. No lockfile changes remain.
- No application source changes. Full local application typecheck,
build, and test commands were not rerun in this dependency-free workflow
worktree. Current-head GitHub CI must pass before merge.
- After merge, verify both affected jobs pass on the exact master source
even if the lockfile bot PR remains pending.

## Risks

pnpm can resolve allowed dependency ranges when a manifest outgrows the
tracked lockfile. This matches the existing release install policy. The
resulting lockfile stays in the job workspace. Verification commands and
runner routing are unchanged. The security reviewer explicitly accepted
this existing dependency-policy tradeoff for both jobs after reviewing
repository policy and the source/authorization checks. A future shared
immutable dependency artifact would improve reproducibility across jobs.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, repository tools, and code
execution. The exact serving model ID and context window are not exposed
by this environment.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] Local verification passes: all 457 workflow tests, actionlint, and
the stale-lockfile reproduction described above.
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-11 15:56:21 -07:00
Dotta 10ff2d063e Merge branch 'codex/work-folders-staging-hardening-refresh' into codex/work-folders-remote-recovery-refresh
* codex/work-folders-staging-hardening-refresh:
  fix(test): await issue lock before retry race assertions (#13273)
  fix: resume saved user messages after execution recovery (#13270)

# Conflicts:
#	server/src/services/native-runtime/native-runner-restart-recovery.integration.test.ts
2026-09-11 17:35:52 -05:00
Dotta 2623accb55 Merge branch 'codex/work-folders-remote-recovery-refresh' into codex/work-folders-final-integration
* codex/work-folders-remote-recovery-refresh:
  fix(test): await issue lock before retry race assertions (#13273)
  fix: resume saved user messages after execution recovery (#13270)
2026-09-11 17:35:52 -05:00
Dotta 6f981ce7ea Merge branch 'codex/work-folders-runtime-hardening-refresh' into codex/work-folders-staging-hardening-refresh
* codex/work-folders-runtime-hardening-refresh:
  fix(test): await issue lock before retry race assertions (#13273)
  fix: resume saved user messages after execution recovery (#13270)

# Conflicts:
#	server/src/services/heartbeat.ts
#	server/src/services/native-runtime/native-session-executor.test.ts
2026-09-11 17:35:36 -05:00
Dotta 54c3c09596 Merge branch 'codex/work-folders-storybook-refresh' into codex/work-folders-runtime-hardening-refresh
* codex/work-folders-storybook-refresh:
  fix(test): await issue lock before retry race assertions (#13273)
  fix: resume saved user messages after execution recovery (#13270)
2026-09-11 17:35:13 -05:00
Dotta c510314365 Merge branch 'codex/work-folders-pi-refresh' into codex/work-folders-storybook-refresh
* codex/work-folders-pi-refresh:
  fix(test): await issue lock before retry race assertions (#13273)
  fix: resume saved user messages after execution recovery (#13270)
2026-09-11 17:35:12 -05:00
Dotta 97c73c17e3 Merge branch 'codex/work-folders-base-refresh' into codex/work-folders-pi-refresh
* codex/work-folders-base-refresh:
  fix(test): await issue lock before retry race assertions (#13273)
  fix: resume saved user messages after execution recovery (#13270)
2026-09-11 17:35:12 -05:00
Dotta bfa8d00c31 Merge commit '1c4bcff2b182c6a38d0128a25c6be217dd33f843' into codex/work-folders-base-refresh
* commit '1c4bcff2b182c6a38d0128a25c6be217dd33f843':
  fix(test): await issue lock before retry race assertions (#13273)
  fix: resume saved user messages after execution recovery (#13270)
2026-09-11 17:35:12 -05:00
Dotta fc54683eb6 Merge branch 'codex/work-folders-remote-recovery-refresh' into codex/work-folders-session-compat-refresh
* codex/work-folders-remote-recovery-refresh:
  fix(runner): keep healthy native sessions alive (#13261)
  feat(connections): add AgentMail inboxes and email tasks (#13256)
  fix: stop completion reviews caused by policy upgrades (#13266)
  fix(ci): avoid empty pnpm caches from lockfile refresh (#13267)
  feat: accept a base64-encoded Cloud UI snippet (#13245)
  ci: use reserved AWS capacity for post-merge cloud verification (#13257)
  Fix Codex API key authentication in tests and runs (#13260)
  refactor: remove automatic productivity reviews (#13263)
  fix: continue conversations after confirmed remote runner stop (#13254)
  ci: cache Rust dependencies used by post-merge typecheck (#13259)
  fix(ui): restore task page archive shortcut (#13253)
  feat(ui): show one rolling runner activity per commentary group (#13255)
  fix(ui): hide retry countdown after execution starts (#13258)
  test: isolate native controller takeover fixture (#13212)
2026-09-11 17:19:00 -05:00
Dotta 43e9c40013 Merge branch 'codex/work-folders-staging-hardening-refresh' into codex/work-folders-remote-recovery-refresh
* codex/work-folders-staging-hardening-refresh:
  fix(runner): keep healthy native sessions alive (#13261)
  feat(connections): add AgentMail inboxes and email tasks (#13256)
  fix: stop completion reviews caused by policy upgrades (#13266)
  fix(ci): avoid empty pnpm caches from lockfile refresh (#13267)
  feat: accept a base64-encoded Cloud UI snippet (#13245)
  ci: use reserved AWS capacity for post-merge cloud verification (#13257)
  Fix Codex API key authentication in tests and runs (#13260)
  refactor: remove automatic productivity reviews (#13263)
  fix: continue conversations after confirmed remote runner stop (#13254)
  ci: cache Rust dependencies used by post-merge typecheck (#13259)
  fix(ui): restore task page archive shortcut (#13253)
  feat(ui): show one rolling runner activity per commentary group (#13255)
  fix(ui): hide retry countdown after execution starts (#13258)
  test: isolate native controller takeover fixture (#13212)

# Conflicts:
#	server/src/services/native-runtime/native-restart-recovery.test.ts
2026-09-11 17:18:57 -05:00
Dotta 58edd959ac Merge branch 'codex/work-folders-runtime-hardening-refresh' into codex/work-folders-staging-hardening-refresh
* codex/work-folders-runtime-hardening-refresh:
  fix(runner): keep healthy native sessions alive (#13261)
  feat(connections): add AgentMail inboxes and email tasks (#13256)
  fix: stop completion reviews caused by policy upgrades (#13266)
  fix(ci): avoid empty pnpm caches from lockfile refresh (#13267)
  feat: accept a base64-encoded Cloud UI snippet (#13245)
  ci: use reserved AWS capacity for post-merge cloud verification (#13257)
  Fix Codex API key authentication in tests and runs (#13260)
  refactor: remove automatic productivity reviews (#13263)
  fix: continue conversations after confirmed remote runner stop (#13254)
  ci: cache Rust dependencies used by post-merge typecheck (#13259)
  fix(ui): restore task page archive shortcut (#13253)
  feat(ui): show one rolling runner activity per commentary group (#13255)
  fix(ui): hide retry countdown after execution starts (#13258)
  test: isolate native controller takeover fixture (#13212)

# Conflicts:
#	server/src/__tests__/plugin-worker-manager.test.ts
#	server/src/services/environment-runtime.ts
#	server/src/services/heartbeat.ts
2026-09-11 17:16:33 -05:00
Dotta ef1195ca6e Merge branch 'codex/work-folders-storybook-refresh' into codex/work-folders-runtime-hardening-refresh
* codex/work-folders-storybook-refresh:
  fix(runner): keep healthy native sessions alive (#13261)
  feat(connections): add AgentMail inboxes and email tasks (#13256)
  fix: stop completion reviews caused by policy upgrades (#13266)
  fix(ci): avoid empty pnpm caches from lockfile refresh (#13267)
  feat: accept a base64-encoded Cloud UI snippet (#13245)
  ci: use reserved AWS capacity for post-merge cloud verification (#13257)
  Fix Codex API key authentication in tests and runs (#13260)
  refactor: remove automatic productivity reviews (#13263)
  fix: continue conversations after confirmed remote runner stop (#13254)
  ci: cache Rust dependencies used by post-merge typecheck (#13259)
  fix(ui): restore task page archive shortcut (#13253)
  feat(ui): show one rolling runner activity per commentary group (#13255)
  fix(ui): hide retry countdown after execution starts (#13258)
  test: isolate native controller takeover fixture (#13212)

# Conflicts:
#	packages/plugins/sandbox-providers/daytona/src/plugin.test.ts
#	packages/plugins/sandbox-providers/daytona/src/plugin.ts
2026-09-11 17:16:09 -05:00
Dotta 24a7ab22f6 Merge branch 'codex/work-folders-pi-refresh' into codex/work-folders-storybook-refresh
* codex/work-folders-pi-refresh:
  fix(runner): keep healthy native sessions alive (#13261)
  feat(connections): add AgentMail inboxes and email tasks (#13256)
  fix: stop completion reviews caused by policy upgrades (#13266)
  fix(ci): avoid empty pnpm caches from lockfile refresh (#13267)
  feat: accept a base64-encoded Cloud UI snippet (#13245)
  ci: use reserved AWS capacity for post-merge cloud verification (#13257)
  Fix Codex API key authentication in tests and runs (#13260)
  refactor: remove automatic productivity reviews (#13263)
  fix: continue conversations after confirmed remote runner stop (#13254)
  ci: cache Rust dependencies used by post-merge typecheck (#13259)
  fix(ui): restore task page archive shortcut (#13253)
  feat(ui): show one rolling runner activity per commentary group (#13255)
  fix(ui): hide retry countdown after execution starts (#13258)
  test: isolate native controller takeover fixture (#13212)
2026-09-11 17:15:49 -05:00
Dotta 8388824d6b Merge branch 'codex/work-folders-base-refresh' into codex/work-folders-pi-refresh
* codex/work-folders-base-refresh:
  fix(runner): keep healthy native sessions alive (#13261)
  feat(connections): add AgentMail inboxes and email tasks (#13256)
  fix: stop completion reviews caused by policy upgrades (#13266)
  fix(ci): avoid empty pnpm caches from lockfile refresh (#13267)
  feat: accept a base64-encoded Cloud UI snippet (#13245)
  ci: use reserved AWS capacity for post-merge cloud verification (#13257)
  Fix Codex API key authentication in tests and runs (#13260)
  refactor: remove automatic productivity reviews (#13263)
  fix: continue conversations after confirmed remote runner stop (#13254)
  ci: cache Rust dependencies used by post-merge typecheck (#13259)
  fix(ui): restore task page archive shortcut (#13253)
  feat(ui): show one rolling runner activity per commentary group (#13255)
  fix(ui): hide retry countdown after execution starts (#13258)
  test: isolate native controller takeover fixture (#13212)
2026-09-11 17:15:49 -05:00
DottaandPaperclip 3dd2b51596 merge: integrate current master and preserve preview migration upgrades
Regenerate migration metadata after mainline claimed 0272. Preserve the work-folder SQL bytes under 0273 and exercise missing earlier migrations against saved preview data.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-11 17:15:48 -05:00
DottaandPaperclip 51b0e01ead fix: resume saved user messages after execution recovery (#13270)
Preserve verified native process-stop evidence and retry saved user messages through normal continuation admission after recovery cleanup. Show the current wait reason and serialize delivery so a saved message starts one fresh turn.

Validated with 410 focused tests, typecheck, build, token gates, all PR CI checks, and Greptile 5/5.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-11 17:12:55 -05:00
DottaandPaperclip 2083bf6f9a feat(connections): add AgentMail inboxes and email tasks (#13256)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Connections give agents controlled access to external services.
> - Experimental channels already map conversations to tasks and durable
work queues.
> - Email needs inbox ownership, recipient envelopes, delivery records,
and explicit sends.
> - This pull request adds AgentMail to that infrastructure and keeps
the provider key in the server vault.
> - Agents can receive and send email from local or sandbox execution
while the board follows each conversation in its task.

## Linked Issues or Issue Description

**Problem or motivation**

Agents need dedicated email addresses. Incoming email should become
assigned work. Internal task comments and progress must never become
outgoing email by accident.

**Proposed solution**

Add experimental AgentMail connections, an inbox assignment wizard,
durable email intake and publication, task email cards, and
authenticated API, CLI, and native runtime actions. Agents use Paperclip
credentials to request sends. Paperclip owns the provider key and
enforces access and task authority.

**Alternatives considered**

A general mailbox MCP connector does not provide durable task binding or
publication boundaries. A separate mailbox application duplicates task
collaboration. The board instead directs the agent through the normal
task conversation.

**Roadmap alignment**

This extends the existing experimental connections and task
infrastructure. Product scope and interaction design were reviewed with
the maintainer. Related connection authority work: #11831 and #11818.
The duplicate search found no competing task-based AgentMail
integration.

## What Changed

- Add AgentMail catalog data, shared contracts, company-scoped email
records, and an additive migration.
- Add vaulted setup, inbox assignment, access grants, trust guidance,
and provider-side allowlist guidance.
- Support WebSocket and signed-webhook intake through a shared durable
pipeline, deduplication, catch-up, and task wakeups.
- Queue explicit new conversations and replies with immutable send
intents, idempotency, delivery state, and uncertain-send resolution.
- Show inbound and outbound email cards in normal task conversations.
Keep internal messages internal.
- Add task-scoped CLI actions and the sandbox callback routes required
for Daytona execution.
- Provide a dedicated AgentMail skill automatically only to agents with
active authorized inbox assignments. Keep email instructions out of the
universal Paperclip skill.
- Advertise connector-owned `agentmail_inboxes`,
`agentmail_read_thread`, `agentmail_send`, and `agentmail_delivery`
tools only in eligible native sessions. Recheck live authority on
execution.
- Isolate Codex CLI connector skills by agent and skill revision.
Deliver the assigned skill in the run prompt for adapters that use
shared skill directories, including resumed turns. Keep automatic skills
out of manual persistent sync. Show them as read-only and document the
pattern in the connector playbook.
- Fix AgentMail health checks that entered local-stdio validation and
optional missing Codex credential cleanup in sandboxes.
- Add API, pipeline, authorization, sandbox, browser, and Storybook
coverage.

## Verification

- Live AgentMail testing covered WebSocket intake, signed webhooks,
restart catch-up, and a full receive → task → Daytona Codex CLI →
explicit reply → Delivered round trip. The reply was verified in the
other inbox. The normal task composer also initiated an outgoing email
child task.
- The connector-skill change was verified in the browser: AgentMail
appears once as an automatic, read-only skill with its assigned address.
Disabling experimental chat connections removes it; re-enabling restores
it. A regression test covers assignment data arriving after library
data.
- Connector regression coverage passed 178 runtime utility, email
integration, skill-route, and heartbeat tests. All 17 Codex execution
tests passed, including per-agent skill isolation, model identity,
revision changes, removal, and prompt delivery without shared skill
files.
- After rebasing onto master, all 44 focused email, heartbeat, and
native-authority tests passed. All 313 native-session executor tests
passed. The UI regression suite passed all 3 tests. These test sets
overlap earlier focused runs.
- Full workspace typecheck and build passed after the rebase. Token
gates passed. Earlier focused Playwright task/setup coverage and the
Storybook build also passed.
- Native connector tool execution uses deterministic integration tests.
Live Daytona qualification used the Codex CLI adapter; the new
shared-home prompt fallback has deterministic coverage.
- The full repository suite is run by CI. The earlier unsharded local
full-suite attempt was stopped after the equivalent CI suites passed and
is not reported as a completed local run. Greptile reviewed
`7e57dc267a8446d3c906e3cc5b8abc94fb8860eb` at 5/5 with no unresolved
threads. All server, workspace, serialized server, and browser suites
passed in CI. The build job hit a five-second timeout in a runner
transport test; both variants and the full 80-test file passed locally
with unchanged timeouts. The build passed on retry on the same commit
without code or timeout changes. All required CI gates, including the
final `ci / verify` and `ci / e2e` summaries, are green on
`7e57dc267a8446d3c906e3cc5b8abc94fb8860eb`.

## Risks

- Email from external senders can start normal agent work. Setup
recommends a low-trust agent and AgentMail sender controls. Sender
addresses never grant board membership.
- Provider timeouts can leave uncertain sends. Retries retain their
idempotency key; expired windows require reconciliation or operator
resolution.
- Connector skills and native tools are assignment-dependent and require
current access. Revocation denies retained calls; assignment changes
select a new runtime context.
- Activation remains behind the experimental-channel setting. The native
runner path has deterministic coverage; live Daytona qualification used
the Codex CLI adapter.
- Schema changes are additive. Inbox ownership is unique across
companies. Disconnect preserves provider inboxes and task history.

## Model Used

OpenAI GPT-6 (Codex). Used reasoning, repository tools, code execution,
and browser testing. The exact deployment model ID and context-window
size were not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-11 16:56:38 -05:00
DottaandPaperclip a12bbd1824 fix: stop completion reviews caused by policy upgrades (#13266)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The native runtime records completion assessments and task
decisions.
> - An application update can change the assessment policy version.
> - The previous code treated that version change as a reason for human
review.
> - An upgrade alone does not give the user a new decision to make.
> - This change keeps existing decisions and withdraws obsolete upgrade
review cards.

## Linked Issues or Issue Description

**What happened?**

A rules version change moved unfinished tasks into review and created a
card that said, "Review the superseding native policy assessment." The
task did not need new work or a human decision.

**Expected behavior**

New runs use the current rules. An upgrade leaves existing task
decisions alone. The saved policy version remains available in the audit
history.

**Steps to reproduce**

1. Save a native run assessment and a task decision.
2. Change the native status policy version.
3. Run finalization reconciliation without new task evidence.
4. The previous code created a review card. The corrected code keeps the
saved assessment and decision.

Related context: #13038 changed the native policy version. Searches
found no duplicate fix for upgrade-only completion reviews.

## What Changed

- Remove policy-version mismatch as a reconciliation trigger.
- Withdraw pending cards only when their source decision, effect ledger,
creator, key, and prompt match the old upgrade-only review.
- Restore the previous status only while that decision and status
version remain current and no other review gate is pending.
- Preserve answered cards, real review requests, later task changes, and
historical assessments and decisions.
- Record cleanup activity and retire any corresponding chat review
actions.
- Isolate cleanup failures so one old card cannot block other cleanup or
normal finalization.
- Update the status conformance fixture, regression tests, and
architecture documentation.

## Verification

- Passed: `pnpm exec vitest run
server/src/__tests__/native-status-arbiter-corpus.test.ts` (23 tests,
including the 53-fixture status corpus).
- Passed: `pnpm -r typecheck`.
- Passed: `git diff --check`.
- Passed: `pnpm build`.
- Passed: fresh Greptile review at 5/5 on `d24e5ecaf`, with no open
review threads.
- Passed: the 23 focused tests in the isolated full-suite environment.
- Local `pnpm test:run`: the server group finished with 10,638 passed
and one missing-fixture failure. Built the required
`fake-codex-app-server` fixture and reran the entire affected native
session-resume suite: 37/37 passed. The initial full command exited on
that server-group failure, so remaining groups are covered by CI.
- Passed: the workspace-runtime-exposure suite (25 tests, 3 platform
skips).
- Passed: all CI gates, including every test shard, browser tests,
typecheck, and build. The server shard passed on one retry after an
unrelated host-port conflict in the unchanged workspace-exposure tests.
- Cleanup tests cover repeat runs, real reviews, answered cards, later
statuses, newer decision identity, status changes back to review, other
pending requests, run scope, cleanup failures, retry, and live
publication failures.

## Risks

- Cleanup changes stored task state. It checks the exact obsolete
decision and status version under database locks before restoring
status.
- Pending approvals, interactions, and execution stages prevent
restoration out of review.
- The cleanup handles at most 100 matching cards per reconciliation
pass. It does not rewrite old decisions or accept an agent's completion
claim.
- New evidence and explicit task changes still use the existing
reconciliation paths. This change does not reevaluate old work merely
because Paperclip was updated.

## Model Used

OpenAI Codex, GPT-6. The exact deployment identifier and context window
are not exposed in this session. Used reasoning, repository inspection,
code editing, shell execution, and automated tests.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-11 16:55:46 -05:00
Devin FoleyandPaperclip 19c76bfc3f fix(ci): avoid empty pnpm caches from lockfile refresh (#13267)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - CI installs dependencies before it verifies and builds cloud
artifacts.
> - Install jobs share a pnpm package-store cache with lockfile refresh.
> - Lockfile refresh resolves versions without downloading packages.
> - That job saved an empty cache before full install jobs could save
theirs.
> - This PR prevents lockfile refresh from publishing that empty entry.
> - Full install jobs can then populate the cache and reuse
dependencies.

## Linked Issues or Issue Description

Refs #13259 for the related cloud verification cache work. No duplicate
empty-cache fix was found.

**What happened?**

Refresh Lockfile run 34517514932 saved a 216-byte default-branch pnpm
cache at 18:58:08 UTC on September 10. Full install jobs still restore
that empty entry. The cache API reports 216 bytes for master and about
703 MB for populated entries with the same key and cache version in PR
scopes.

**Expected behavior**

A job that installs dependencies should populate the shared
package-store cache.

**Steps to reproduce**

1. Run lockfile refresh with a new lockfile cache key.
2. Its resolution-only command leaves the package store empty.
3. The Node action saves the empty archive before a full install
finishes.
4. Later jobs report a cache hit but download packages again.

**Paperclip version or commit**

Observed on master 6728e133f8 and still
present at a23ae894a5.

**Deployment mode**

GitHub Actions cloud verification and release workflows.

## What Changed

- Disable package-manager caching in Refresh Lockfile.
- Document how to remove the existing empty default-branch entry and
verify a populated replacement.
- Add regression coverage for explicit and automatic package-manager
cache selection in a resolution-only job.

## Verification

- actionlint and git diff checks pass.
- All 175 existing workflow-script tests pass. Both new regression cases
pass and fail against the original workflow, covering the explicit pnpm
cache and automatic npm cache paths. This change adds no application
behavior.
- [The cache creator
job](https://github.com/paperclipai/paperclip/actions/runs/34517514932/job/103006542158)
logs a 216-byte upload under the same key still used by cloud
verification.
- The batch-wide local full typecheck and build passed. The local full
test run reported 10,600 passed, 65 skipped, and 13 permission failures
in unchanged runtime-skill suites. These checks were not repeated in
this dependency-free worktree. Current-head Linux CI passes. The
unchanged chat and browser suites passed on their single retry; all
final checks are green. Greptile is 5/5 with all threads resolved.
- After merge, delete only the existing empty master cache entry. Verify
that a master install saves a populated archive and subsequent jobs
reuse packages. Measure the net install-time change before claiming a
latency gain.

## Risks

- Lockfile resolution can require fresh registry metadata. It does not
need a cached package store.
- The existing empty cache must be removed once; this change prevents
its recreation by this workflow.
- Cache benefits vary with download speed and archive extraction time.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, repository tools, and code
execution. The exact serving model ID and context window are not exposed
by this environment.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass — focused workflow checks
pass; the batch-wide local test limitation is disclosed above
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-11 14:35:28 -07:00
Devin Foley 778ac33308 feat: accept a base64-encoded Cloud UI snippet (#13245)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Paperclip Cloud instances can inject a trusted operator HTML snippet
before `</body>` in served UI pages (#13168)
> - Operators deliver env vars to managed instances through
hosting-provider APIs
> - Web application firewalls in front of those APIs reject request
bodies that contain raw `<script` markup
> - The snippet value always contains a script tag, so the firewall
blocks its delivery every time
> - This pull request adds `PAPERCLIP_CLOUD_UI_SNIPPET_B64`, which
carries the same snippet as standard base64
> - The benefit is that operators can ship the snippet through
WAF-fronted delivery pipelines without firewall exceptions

## Linked Issues or Issue Description

Refs #13168 (introduced the Cloud UI snippet).

**Subsystem affected**

Server UI shell serving: `server/src/cloud-ui-snippet.ts`, used by
`static-index-html.ts` and `app.ts`.

**Current behavior**

`PAPERCLIP_CLOUD_UI_SNIPPET` is the only way to configure the Cloud UI
snippet. The value is raw HTML. Delivery pipelines that write env vars
through provider APIs can fail to deliver it: web application firewalls
classify a request body that contains `<script` as an injection attempt
and block it. Verified against Railway's GraphQL API, which sits behind
Cloudflare: a variable value with a bare `<script></script>` returns
HTTP 403 before authentication, and JSON unicode escapes (`<script`) do
not bypass the block. The snippet is exactly the kind of value that
always contains a script tag, so such pipelines cannot deliver it at
all.

**Proposed behavior**

A new optional `PAPERCLIP_CLOUD_UI_SNIPPET_B64` carries the same snippet
as standard base64 of the UTF-8 HTML. The server decodes it and injects
the result through the existing path. The plain variable wins when both
are set. Whitespace and line wrapping in the value are tolerated. A
value that is not canonical base64, or that decodes to blank, is ignored
instead of injected as garbage.

**Reason and benefit**

Operators can deliver the snippet through WAF-fronted APIs without
requesting firewall exceptions. Base64 contains no markup, so the
firewall has nothing to match. Existing deployments see no behavior
change.

**Breaking changes**

None. The new variable is optional. The existing variable is unchanged
and takes precedence.

## What Changed

- `server/src/cloud-ui-snippet.ts`: resolve the snippet from
`PAPERCLIP_CLOUD_UI_SNIPPET` first, then from base64-decoded
`PAPERCLIP_CLOUD_UI_SNIPPET_B64`; ignore non-canonical or blank-decoding
values.
- `server/src/__tests__/cloud-ui-snippet.test.ts`: cover
decode-and-inject, plain-wins precedence, whitespace tolerance,
invalid/blank values, and the self-hosted no-op.
- `doc/cloud-ui-snippet.md`: document the variant, how to produce the
value, and the ignore rules.

## Verification

- `pnpm vitest run server/src/__tests__/cloud-ui-snippet.test.ts
server/src/__tests__/static-index-html.test.ts` — 13 tests pass.
- `tsc --noEmit` in `server/` passes.
- Manual check: on a Cloud-managed instance, set
`PAPERCLIP_CLOUD_UI_SNIPPET_B64="$(base64 < snippet.html)"`, restart,
open `/`, and confirm the decoded snippet appears before `</body>`. On a
self-hosted instance, confirm no snippet is injected.

## Risks

Low risk. The injection path and the Cloud-managed gate are unchanged. A
malformed base64 value is ignored, so the failure mode is a missing
widget, not corrupted HTML. The decoded value is trusted operator
configuration, the same trust model as the plain variable.

## Model Used

- Claude Fable 5 (Anthropic, `claude-fable-5`) via Claude Code CLI,
agentic workflow with tool use (code edits, test runs, and live API
verification of the WAF behavior).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge
2026-09-11 14:13:11 -07:00
Devin FoleyandPaperclip bc68312327 ci: use reserved AWS capacity for post-merge cloud verification (#13257)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Cloud deployments consume a verified image and exact-source
migrator.
> - An image alone is not deployable until source checks and artifact
checks pass.
> - GitHub-hosted queues delayed those checks and the final readiness
signal.
> - This PR gives trusted master work a separate concurrency allowance
on existing AWS runners.
> - Community PRs and arbitrary source inputs keep the GitHub-hosted
fallback.

## Linked Issues or Issue Description

Refs #13243.

**What existing behavior does this improve?**
Time from a master merge to the Cloud deployable v1 signal.

**Current behavior**
For merge d0b7ba4, the image was available after 7m 42s, but readiness
took 16m 05s. Typecheck queued for 6m 40s and the final readiness job
queued for 1m 46s.

**Proposed behavior**
Allow up to 36 concurrent post-merge verification and migrator jobs on
the existing four-vCPU, 16-GiB AWS runners. Workers launch on demand and
terminate after their job; no always-on worker pool or AWS Reserved
Instance purchase is introduced. Keep the combined runner ceiling
unchanged. A separate operator switch enables this route only after the
restricted runner group and Fleet exist.

**Reason and benefit**
Remove GitHub-hosted queue delays from the cloud deployment path. The
gain depends on queue pressure and which remaining job finishes last;
the observed queues are not additive savings.

**Breaking changes**
None to source verification or readiness contracts. Paid routing is
limited to canonical master push/manual events, with exact source checks
on reusable and migrator jobs.

## What Changed

- Route source verification, artifact waiting, dispatch, and readiness
jobs to the separate post-merge Fleet when enabled.
- Require source inputs to match the event's master SHA. Preview inputs
and raced older migrator dispatches stay GitHub-hosted.
- Keep npm publication on GitHub-hosted runners for trusted publishing.
- Bound AWS job timeouts below the 45-minute instance lifetime.
- Document activation, capacity reservation, and rollback.
- Exercise each actual runner selector against allowed and rejected
event/source combinations.

## Verification

- 268 routing and timeout cases pass, including unapproved PR, fork,
branch/tag, arbitrary ref, and disabled-switch cases.
- All 461 focused workflow, preview, and readiness tests pass. The 284
routing/preview cases also pass after the review fixes.
- actionlint passes for changed workflows with the existing
SC2012/SC2016/SC2129 warnings excluded.
- Full local typecheck and build pass (167s and 206s). `pnpm test:run`
completed: 10,600 passed, 65 skipped, and 13 failed in the unchanged
company-skills-service/runtime-skill-cache suites with local filesystem
permission errors. Linux CI is the required test gate; this is not a
claim of a fully passing local suite. Current-head Linux CI is green,
Greptile is 5/5, and all findings are resolved. The final Build retry
passed on a verified 60 GiB AWS runner after correcting the earlier
disk-capacity failure.
- After activation, verify a master run selects the separate group and
all readiness prerequisites pass.

## Risks

- A missing or incorrectly restricted runner group can leave eligible
jobs queued. Enable the switch only after Fleet and group verification.
- PR bursts have 64 slots after reserving 36 for post-merge work. The
image Fleet retains eight, for the same 108-runner total.
- A migrator dispatch racing a newer merge uses GitHub-hosted runners.
This preserves source trust but can retain some queue delay.
- Roll back placement by disabling AWS_POST_MERGE_CI_ENABLED and
rerunning the whole workflow.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, repository tools, and code
execution. The exact serving model ID and context window are not exposed
by this environment.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass — focused change tests
pass; full-suite local permission failures are disclosed above
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-11 14:13:01 -07:00
DottaandPaperclip 3bafac12f7 refactor: remove automatic productivity reviews (#13263)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Its recovery loop keeps assigned work moving after execution
failures.
> - Productivity review used run counts, comment counts, and elapsed
time to create management tasks.
> - Infrastructure failures could satisfy those rules and create more
tasks without evidence that the source work needed management review.
> - This pull request removes that detector and its continuation holds.
> - Bounded recovery, budgets, explicit blockers, and normal review
stages remain in place.
> - Existing task records stay readable and unchanged.

## Linked Issues or Issue Description

Refs #5897. That request describes unwanted automatic productivity
reviews and asks to preserve existing tasks. This change retires the
feature instead of adding another configuration switch.

Related prior approaches: Refs #9191, Refs #12489. Those changes
excluded infrastructure failures or bounded review creation. This
removal replaces the detector rather than tuning its thresholds.

## What Changed

- Delete the scheduled detector, automatic task creation, evidence
refresh, and productivity continuation holds.
- Remove computed productivity fields, special attention items, badges,
and Storybook fixtures.
- Retain historical origin values, decision compatibility, and recovery
recursion exclusions. Add no migration and change no existing task data.
- Update the execution contract. Replace feature tests with regressions
for legacy task reads, ordinary attention, and bounded continuation in
the presence of an old review.

## Verification

- Targeted attention, issue-route, startup, and UI tests: 4 files and
101 tests passed.
- Updated issue-route and UI tests: 2 files and 61 tests passed.
- Bounded continuation regression: 2 cases passed, including a legacy
review plus pre-dispatch cancellation churn.
- `pnpm check:token-gates`: all four gates passed.
- `git diff --check`: passed.
- `pnpm build-storybook`: passed.
- Greptile: 5/5 on `a5a612eea`, with no actionable findings.
- Scheduler and historical recovery regressions: 2 files and 28 tests
passed.
- Repository `pnpm -r typecheck` and `pnpm build`: passed.
- The complete `pnpm test:run` suite passed across the CI server,
serialized-server, and workspace shards on `a5a612eea`. Stopped the
duplicate local monolithic run after the full CI suite passed; no
completed local full-suite result is claimed. The targeted local suites
above passed.
- CI serialized shard 5 initially hit a 10-second timeout in the first
interaction-route test. The complete file passed locally (78 tests),
then the single CI rerun passed.
- All CI gates are green, including the build and end-to-end suites.
- A local merge check against current `master` (`ce09ea40b`) completed
without conflicts.

## Risks

- API responses no longer include the computed `productivityReview`
field. Consumers must stop using it.
- The scheduler no longer creates management work from elapsed time, run
counts, or missing comments. This is the intended behavior change.
- Existing review tasks and explicit dependencies remain in place.
Historical origins still prevent recursive recovery treatment. No task
cleanup or data migration occurs.
- The native review handoff repair is separate from this removal.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, tool use, and code
execution. The exact runtime model identifier and context-window size
are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-09-11 15:46:35 -05:00
DottaandPaperclip ebfdbfb0b1 fix: recover legacy sandbox cwd and preserve staging lock verification
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-09-11 15:40:10 -05:00