Commit Graph
1531 Commits
Author SHA1 Message Date
Nicky LeachandPaperclip 44e4979d23 Capture project and repository update lifecycle events (#15306)
## Thinking Path

> - Existing lifecycle capture records agent transitions and project
creation.
> - Project and repository edits need matching project update records.
> - The record must commit with the mutation so failed writes cannot
lose a hook.
> - Creation with repositories is one creation, and repository
replacement is one update.
> - Archive-only changes preserve project state without creating a hook.
> - Plugin consumption and provider behavior are separate work.

## Linked Issues or Issue Description

**Problem or motivation**

Project edits and repository/workspace changes lack durable lifecycle
records. A future resource plugin needs those changes captured alongside
the existing project creation hook. Archive-only changes must produce no
hook.

**Proposed solution**

Allow project `update` records in the existing lifecycle journal. Record
project and workspace mutations in their database transaction while
holding the project row lock. Suppress intermediate workspace hooks
during project creation and aggregate repository replacement.

**Alternatives considered**

Route-only hooks miss shared service callers. Recording after commit can
lose an event. Emitting a hook for each child mutation exposes
intermediate repository state.

**Roadmap alignment**

This completes project lifecycle capture begun in #15280. Plugin
delivery, VM/volume provisioning, and backfill remain separate. Searches
found no duplicate project lifecycle work; related #13306 concerns
decision events on the in-process plugin bus.

## What Changed

- Record project edits and workspace additions, updates, and removals as
project `update` events.
- Commit each event atomically with its mutation under the project row
lock.
- Keep project creation with repositories to one creation event and
repository replacement to one aggregate update.
- Ignore archive-only changes and retain workspace records.
- Extend the journal action constraint and document project update
capture.

## Verification

- `pnpm -r typecheck` passed on the narrowed scope.
- 57 tests passed across six lifecycle, project, repository, and
chat-project suites.
- Seven managed-sandbox workspace route tests and the CLI
lagging-worktree migration regression passed (65 targeted tests total).
- Full GitHub CI passed on `8ba6f97f22`; all required gates are green.
- Greptile scored the final project-only commit 5/5 with zero unresolved
review threads.
- The branch is current with `master` and has no merge conflicts.
- `git diff --check` and a local secret/PII scan passed.

## Risks

- Apply migration `0300_chunky_chamber.sql` before running the new
server. It permits project update actions and tolerates older JavaScript
worktree backups that omitted the prior CHECK constraint.
- Event-write failure intentionally rolls back the project or repository
mutation.
- Records contain identity and action; future consumers must load
current authorized project/workspace data.
- Plugin consumption, provider calls, volume cleanup, and backfill are
outside this PR.

## Model Used

OpenAI Codex, based on GPT-6, with reasoning, repository inspection,
code execution, and tool use. The exact deployment model ID and context
window are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-06 07:33:18 -07:00
1477d1ecea test: remove the no-op sequential describe modifier (#15286)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Paperclip runs the server and runner test suites with Vitest.
> - Vitest 5 removes the deprecated `describe.sequential` property, so
the pending Vitest 5 upgrade fails the type-check and test jobs.
> - `describe.sequential` only changes behaviour inside a
`describe.concurrent` suite, or when `sequence.concurrent` is on.
> - This repository has neither, so the modifier changed nothing at run
time.
> - The benefit is that the Vitest 5 upgrade can land, and the test
files lose a modifier that did no work.

## Linked Issues or Issue Description

Refs: #12969

## What Changed

- Replace every `describe.sequential` use with a plain `describe` call.
- Drop the `{ concurrent: false }` suite option from the two runner test
files.
- Add a comment to `server/vitest.config.ts` that records why these
suites must run one test at a time.
- Leave the package manifests and the lockfile unchanged.

## Why the modifier did nothing

The Vitest documentation states that `describe.sequential` is useful to
run tests in sequence inside a `describe.concurrent` suite, or with the
`--sequence.concurrent` option. `sequence.concurrent` defaults to
`false`.

This repository satisfies neither condition:

- No test file uses `describe.concurrent`, `it.concurrent`, or
`test.concurrent`.
- `server/vitest.config.ts` sets `sequence.concurrent: false`, with
`maxWorkers: 1`, `maxConcurrency: 1`, and `isolate: true`.
- `packages/paperclip-runner/vitest.config.ts` sets no `sequence` block,
so the `false` default applies.

`packages/db` and `cli` already run the same embedded-Postgres suites
with a plain `describe`, and those jobs are green. The server package
was the only outlier.

The modifier did carry one real piece of knowledge: these suites need
their tests to run one at a time. The new comment in
`server/vitest.config.ts` records that reason next to the setting that
enforces it.

## Verification

- `git grep` for `describe.sequential` returns nothing outside
`node_modules`.
- The author ran the changed server test files under the installed
Vitest 4, and the results match the results without this change.
- Two very large embedded-Postgres test files exceeded the author's
local memory limit, so the CI test jobs cover those two.
- The two changed runner test files have pre-existing local failures
caused by a missing Rust toolchain and a missing global `pnpm` binary.
The failures are identical with and without this change.
- The author type-checked the changed files and found no new error.
- CI must pass the typecheck, build, server test, and runner verify
jobs.

## Risks

- Low risk. Suite execution stays serial, because the Vitest config
enforces it.
- The change adds no dependency and changes no package manifest or
lockfile.
- A future change that turns `sequence.concurrent` on would break these
suites. The new config comment warns against it.

## Model Used

- Claude Sonnet 5 — code edits and local verification.
- OpenAI Codex, GPT-5 — the earlier revision of this branch.

## Test plan

- [x] Every CI check reaches a terminal green state. A pending or queued
check is not a pass.
- [x] The `Typecheck + Release Registry` job passes. This change must
not introduce a type error.
- [x] The `Build` job passes.
- [x] The server test jobs and the runner verify jobs pass.
- [x] Greptile re-reviews this commit set and posts a passing verdict.
The dependabot waiver does not apply to this pull request.
- [x] `mergeable` reads `MERGEABLE` as a terminal value.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have linked the related public issue with `Refs: #12969`
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change and contains no internal
Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-Authored-By: Priya Raman <priya.raman@paperclip.ing>

---------

Co-authored-by: Priya Raman <priya.raman@paperclip.ing>
Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Claude Sonnet 5 <noreply@anthropic.com>
Co-authored-by: nickyleach <331803+nickyleach@users.noreply.github.com>
2026-10-06 07:19:15 -07:00
Devin FoleyandPaperclip 90182b4f8b Report bounded Cloud portfolio failure diagnostics (#15340)
## Thinking Path

> - Paperclip manages work for AI agents and their companies.
> - Cloud instances proxy a trusted user's portfolio through the control
plane.
> - A failed request returns a generic error to the client.
> - That replacement error loses the failure phase and network code in
Sentry.
> - Operators need bounded evidence without upstream messages or
credentials.
> - This PR adds safe diagnostics while preserving the existing request
behavior.

## Linked Issues or Issue Description

Refs #10850, which added the portfolio proxy. No open PR for this
diagnostic gap was found.

**What happened?**

A rejected portfolio fetch becomes a generic 502 in Sentry. The event
cannot distinguish a connection reset, deadline, HTTP response failure,
or body failure. The route's previous warning also included the original
error and a stack identifier.

**Steps to reproduce**

Make the portfolio proxy's fetch reject with a TypeError whose cause has
`code: ECONNRESET`. The client correctly receives the generic 502, but
the captured replacement error loses that code.

**Expected behavior**

Keep the existing client response. Attach only bounded server-side
diagnostic fields to the failure event. Do not retry the request or
expose the original error.

## What Changed

- Add a typed portfolio error with a private frozen diagnostic record:
phase, upstream HTTP status, elapsed milliseconds, and an allowlisted
network code.
- Read at most four error/cause objects through own data properties.
Unknown codes, messages, getters, and out-of-range values do not enter
the record.
- Replace the route's raw-error warnings with safe fields. Send a plain
error plus event-local context through the existing optional Sentry
gate. Keep the route callsite and default fingerprint policy.
- Preserve authentication, trusted headers, cookies, exact HTTP error
bodies, cache behavior, the ten-second deadline, and one fetch per
request. Public responses receive no diagnostic fields.
- Document the fields and test HTTP behavior, privacy, and event
isolation with the real Sentry SDK.

## Verification

- `PAPERCLIP_REQUIRE_SENTRY_TEST_SDK=1 pnpm exec vitest run
server/src/__tests__/cloud-portfolio-error.test.ts
server/src/__tests__/cloud-routes.test.ts
server/src/__tests__/sentry.test.ts
server/src/__tests__/run-failure-sentry-real-sdk.test.ts`: 65 passed,
with the audited optional SDK installed.
- Full local `pnpm -r typecheck` and `pnpm build` passed on Node 24.21.0
and pnpm 9.15.4.
- Independent review found no blockers and independently passed all 65
tests, including the real SDK checks, on this exact commit.
- Full Linux CI passed on this exact commit and provides aggregate suite
coverage (54 successful checks, 2 intentional skips). A duplicate full
local aggregate was not run.
- The first SDK contract job failed before tests when npm could not
resolve an OpenTelemetry transitive package. A subsequent empty-cache
install first encountered a missing tarball, then succeeded after the
registry artifact became available. All 6 real-SDK tests passed against
that fresh install; the single unchanged-head CI retry passed. The SDK
pin, workflow, and dependency files are unchanged.
- The first browser shard 8 run timed out waiting for the inbox retry
reply after 45 seconds. The unchanged isolated case passed (1/1), and
the test, UI handler, fixture, and recovery files match the base commit.
The failed log contains no wakeup POST before the test's immediate
navigation; a navigation/request timing race is suspected but unproven
without a trace. The single unchanged-head shard retry passed (20
passed, 1 skipped); no timeout or source change was made.
- Greptile reviewed this exact commit at 5/5 with no unresolved review
threads.
- No live portfolio request was replayed. Route tests use controlled
local upstream responses.
- The added diff passed the secret and PII scan and `git diff --check`.

## Risks

This is a diagnostic change. It does not identify or repair the origin
of a connection reset. Unknown transport failures remain `unknown`.
Elapsed values outside 0–60,000 ms become null. Default Sentry
fingerprinting remains enabled; exact historical group membership is not
guaranteed. No retry, migration, deployment, or configuration change is
included.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, repository editing, code
execution, and independent agent review. The exact deployment model ID
and context window are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-06 06:58:36 -07:00
DottaandPaperclip 9b3fe260ba fix(tasks): surface Codex ChatGPT model rejection (#15299)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for work.
> - Native Runner runs report provider errors and can also save a structured failure result.
> - Codex rejects a model that the user's ChatGPT account cannot use.
> - Master now diagnoses this rejection, but the task's compact run data omits its message. The thread can still call it a generic run failure.
> - Users need the account restriction and a clear step to repair the model selection.
> - This pull request shows the existing diagnosis as “Model unavailable” on the task.

## Linked Issues or Issue Description

**What happened?**

Codex returns HTTP 400 with `invalid_request_error` and the message `The 'gpt-6.1-sol' model is not supported when using Codex with a ChatGPT account.` Master now stores an actionable diagnosis for this rejection. The task thread still labels it “Run failed” and does not receive its error text in compact run data.

**Expected behavior**

Show the account restriction on the task and in the run error. Tell the user to choose a supported model or clear the task's model override before retrying.

**Steps to reproduce**

1. Use a Native Runner Codex agent signed in with a ChatGPT account.
2. Select a model that produces the rejection above and start a task.
3. Let the runner save its generic failed result. Inspect the task's failure marker and recovery notice.

**Additional context**

Refs: #15304. That merged PR diagnoses the provider failure and preserves worker and review recovery rules. This PR adds its task-facing message and guidance without changing that diagnosis or those rules.

Refs: #13134. That PR improves model discovery for ChatGPT accounts. This PR exposes the rejection when a configured model still fails at execution time.

## What Changed

- Return a bounded model rejection message in compact issue-run data.
- Show “Model unavailable” and model-change guidance in the task thread and recovery notice.
- Add database and UI regression tests, including both the original rejection text and master's fixed diagnosis. Document the new failure message.

## Verification

- Focused merged-branch validation: 279 tests passed across activity service, native provider failure observation and PostgreSQL integration, TaskChatThread, and ExecutionBlockerNotice.
- `pnpm -r typecheck`, `pnpm build`, and `pnpm check:token-gates` passed on the merged source tree.
- Greptile reviewed conflict-resolution commit `1db39c4e636a92e2e76ba224b71c6f1e2f556c81` at 5/5 with no findings or inline comments.
- All 55 check runs completed without failure on that commit. The two optional Storybook jobs were skipped. The legacy Snyk status passed. The branch has no merge conflicts.
- UI regression assertion: the task's failure marker says “Model unavailable” and retains the account restriction. It no longer says that this failure happened after a final response.

## Risks

- Provider recognition and recovery are owned by the existing master implementation. This PR exposes only bounded error text for failed runs with `native_provider_model_rejected`.
- Historical runs with the generic `adapter_failed` code are not reclassified. No stored run is rewritten.
- Existing retry and reconciliation gates remain in place. No schema migration or model configuration change is required.

## Model Used

OpenAI Codex, based on GPT-6, with reasoning, code execution, and browser inspection. The exact deployment model ID and context window are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context to this change
- [x] I have specified the model used (with version and capability details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template
- [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before requesting merge

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-06 08:05:25 -05:00
DottaandPaperclip a1ab55a56d fix(agents): grant configuration access by default (#15283)
## Thinking Path

> - Paperclip manages agent work and permissions for a company.
> - Agent setup can require one agent to configure another agent.
> - New standard agents could create agents, but they had no direct
configuration grant.
> - Existing agents must keep their current permissions after an
upgrade.
> - The requested new-agent defaults include 13 more direct permissions
for suggestions, skills, tools, audit, inbox, and task assignment.
> - This pull request adds the 14-grant set at creation and approval
activation, retains it through invitations, and keeps existing agents
unchanged.
> - The change keeps low trust and built-in agents on their narrower
permissions.

## Linked Issues or Issue Description

**What existing behavior does this improve?**

The agent creation and approval flows, and the agent configuration
authorization path.

**Current behavior**

A new standard agent can create an agent. It cannot make protected
changes to a peer agent unless an operator adds an `agents:configure`
grant.

**Proposed behavior**

Add direct grants for `agents:configure`, `agents:suggest-changes`,
`skills:create`, `skills:suggest-changes`, `tools:manage_connections`,
`tools:manage_profiles`, `tools:view_audit`, `audit:view_agent_actions`,
`tools:use`, `tools:manage_runtime`, `inbox:manage`, `tasks:assign`,
`tasks:assign_scope`, and `tasks:manage_active_checkouts` to new
standard agents. Scope `tasks:assign_scope` to the agent’s reporting
subtree. Keep existing agents and their grants unchanged.

**Reason and benefit**

New standard agents can complete agent setup and the requested tool,
skill, inbox, and task workflows under existing route, scope, and
approval checks.

**Breaking changes**

Existing agents keep their current permissions. There is no permission
migration.

Related PR: #12212 adds scoped grant routes. This PR changes the default
grant.

## What Changed

- Add the 14 requested direct grants in agent creation and approval
activation. Keep them when invitation approval replaces grants,
preserving explicit scopes. Remove them when an agent is deleted.
- Apply defaults only to new agents. Remove the existing-agent
permission migration, its snapshot, and its journal entry. Preserve
existing scoped grants.
- Add permission, scope, invitation, and existing-agent regression
tests. Document all default and excluded permissions.
- Prevent agent keys from creating, changing, or restoring host-executed
process or local adapter command settings, and from restoring workspace
commands through rollback.

## Verification

- Run `node_modules/.bin/vitest run
server/src/__tests__/agent-default-configure-grants.test.ts
server/src/__tests__/invite-join-grants.test.ts
packages/db/src/migration-snapshot-drift.test.ts`. All 15 tests pass.
These cover new-agent defaults, unchanged existing grants, pending
approval, invitation grants, and migration history.
- Run `node_modules/.bin/tsc -p server/tsconfig.json --noEmit`. It
passes.
- Run `packages/db/node_modules/.bin/tsx
packages/db/src/check-migration-numbering.ts` and
`packages/db/node_modules/.bin/tsx
packages/db/src/check-migration-safety.ts`. Both pass.
- Confirm that this PR has no files under `packages/db/src/migrations/`
in its final diff.
- GitHub CI at `e8173b2c41` passes build, typecheck, server suites,
browser shards, and canary verification. One unchanged OpenCode
transport test reached its five-second timeout in the first Runner shard
run. That test passes locally in 2.55 seconds. The shard passed on one
retry. All 54 checks pass, with two expected skips.
- Greptile gives this exact head 5/5. Security review passes. The PR has
no unresolved review threads or merge conflicts.

## Risks

- The 14 default permissions apply only to new standard agents. Existing
permissions stay unchanged. Low trust and managed built-in agents are
excluded.
- New grants include connection, runtime, and active-checkout
management. Existing company, responsible-user, scope, and approval
checks remain in force. The default inbox grant carries a
responsible-user-only scope so it cannot override another user's inbox
settings.
- Protected changes still need the responsible user's authority when
that check applies. Company boundaries and approval gates still apply.
- Agent-authenticated requests cannot configure process adapters or host
command settings on local adapters. Known provider credential references
remain allowed, as do narrow plain authentication overrides on new peers
when the caller uses an AI connection pool. Arbitrary environment
settings remain blocked. Board operators retain the host configuration
paths.

> I checked `ROADMAP.md`. This is a narrow fix to existing agent
configuration behavior.

## Model Used

- OpenAI Codex, GPT-6 series. This runtime did not expose its exact
hosted model ID or context window. This revision uses OpenAI GPT-6
through Codex with tool use, code execution, and tests. The runtime does
not expose the exact hosted model ID or context window.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-06 05:28:48 -05:00
Devin FoleyandPaperclip f858207161 Guard routine UUID lookups without narrowing valid inputs (#15313)
## Thinking Path

> - Paperclip manages work for AI agents and their companies.
> - Routines expose details, triggers, and management actions through
resource IDs.
> - These resource IDs are UUIDs. The UI and CLI do not resolve short
prefixes.
> - A malformed ID reaches a PostgreSQL UUID comparison and returns a
server error.
> - A lookup guard can return the existing not-found response before
that query.
> - This PR preserves valid PostgreSQL UUID input forms and the existing
access checks.

## Linked Issues or Issue Description

Refs #11471. This is a credited continuation of the lookup-guard
approach from @mv2woods. That older PR remains open and unchanged. Its
review requested the required PR description sections. This continuation
uses current master and adds UUID compatibility and authorization
coverage.

The earlier `isUuidLike` guard restricts UUID versions to 1–5 and trims
input. The database currently accepts other UUID values and input forms.
This guard preserves the existing [PostgreSQL UUID input
contract](https://www.postgresql.org/docs/current/datatype-uuid.html),
including uppercase, paired braces, omitted hyphens, and hyphens after
groups of four digits. It rejects whitespace and short prefixes without
rewriting the value sent to the database.

## What Changed

- Guard the shared routine and private-trigger UUID lookups. Malformed
resource IDs return null, so existing routes return their normal 404
response.
- Keep company access, assignee permissions, body validation order, and
database error propagation unchanged.
- Add real PostgreSQL tests for stored UUIDv4, UUIDv7, nil, and max
values in six input forms. Add no-query checks for malformed input and
HTTP coverage across all 15 root-resource route handlers.
- Document complete resource IDs and distinguish them from opaque public
webhook IDs.

## Verification

- `pnpm exec vitest run server/src/__tests__/routines-service.test.ts
server/src/__tests__/routines-e2e.test.ts`: 91 passed, including the new
PostgreSQL and HTTP regressions.
- Independent review found no blockers and passed all 9 focused
PostgreSQL and HTTP regression cases on this commit.
- Full local `pnpm -r typecheck` and `pnpm build` passed on Node 24.21.0
with pnpm 9.15.4.
- Full Linux CI passed on `0a2990eca2f904335821027a322e4db868151eb3`: 53
successful checks and 2 inapplicable Storybook skips. No retries were
needed. This provides aggregate suite coverage; a duplicate full local
aggregate was not run.
- [Greptile reviewed this exact
commit](https://github.com/paperclipai/paperclip/pull/15313#issuecomment-6010222312)
at 5/5 with no findings or unresolved threads. The PR is ready for
review and has no merge conflicts.
- `git diff --check` and the added-diff secret and PII scan passed.

## Risks

Malformed routine and private-trigger IDs now return 404 instead of a
database error. Full UUIDs retain the existing company and assignee
checks. This change does not add prefix lookup, alter public webhook
IDs, or validate unrelated nested revision/thread IDs or query
parameters. No migration is required.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, repository editing, code
execution, and independent agent review. The exact deployment model ID
and context window are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-05 22:54:25 -07:00
Devin FoleyandPaperclip 1d5a439e2b Diagnose native model rejections and preserve repairable reviews (#15304)
## Thinking Path

> - Paperclip manages agent execution and recovery.
> - A native provider can return a failed turn with an accepted result.
> - This path replaced a structured model rejection with a generic
failure.
> - Finalization could also queue the same failed request for recovery.
> - This change retains a bounded model and authentication diagnosis.
> - Workers wait for a configuration fix; reviews retain their
assignment.

## Linked Issues or Issue Description

**Describe the bug**

A native Codex turn can report HTTP 400 because the selected model is
not supported by its ChatGPT connection. When the turn also returns a
failed semantic result, the run shows `Native session failed` and
`adapter_failed`. The native failed-result finalizer can create a retry
intent before the adapter error is saved.

**To Reproduce**

Use a native Codex session that returns a structured
`invalid_request_error` model/ChatGPT rejection and an accepted failed
result. The regression tests reproduce this with a stub provider and a
real isolated PostgreSQL database. No provider account or live request
is needed.

**Expected behavior**

Show an actionable error and stop automatic retries of the rejected
request. Block the current worker for a configuration fix. Preserve a
pending review so its reviewer can explicitly retry after repair and
resolve the original assignment. A stale run must not block a new task
owner or override a completed review.

**Version and deployment mode**

The affected source path is present at `858094ba81`. This change applies
to native Codex execution in local and remote environments.

Related work: #13853 covers CLI protocol compatibility, #14942 refreshes
runtime/model pins, and #12767 proposes legacy adapter model validation.
This change concerns accepted native failed results and does not replace
those changes.

## What Changed

- Recognize only a bounded structured HTTP 400 provider error for the
exact selected model and failed turn.
- Save a fixed actionable error and four fixed diagnostic fields.
Exclude raw provider text and model names from the new diagnostic.
- Re-derive finalization evidence from the pinned execution and
committed runner event, including its canonical hash and identity
bindings.
- Block only the current worker. For a current pending reviewer,
preserve the original review decision and status version, release
execution, and create no automatic recovery action. Recheck execution
ownership under the issue lock. Preserve superseded and completed
reviews.
- Keep unknown failures, accepted results, cleanup, and ownership fences
intact. Advance the status policy version to `phase6-v8`.
- Route this exact failure code through the existing configuration
recovery path. Permit an authenticated Board retry of this native
failure only for its saved, still-pending review; discard caller review
markers and revalidate at dispatch.

## Verification

- Node 24: `pnpm -r typecheck` and `pnpm build` passed.
- Independent focused validation: 222 tests passed across the new
observer and PostgreSQL integration suites, status arbiter, diagnostic
redaction, recovery classification, wake policy, and wake use cases.
- The integration tests use actual result persistence, finalization, and
the wake dispatcher. They cover zero retry dispatch for an authorized
rejection, repeated reconciliation, pending/superseded/resolved reviews,
reassignment, and a same-agent successor at an unchanged status version.
- Final-commit verification: full typecheck and build passed;
independent route/integration/arbiter/review validation passed 136 tests
with no remaining source findings. This includes authenticated retry
refusals, actual heartbeat retry admission, atomic queued-review claim,
and acceptance of the original review.
- The local aggregate test run was stopped to avoid duplicating the
canonical Linux CI aggregate on this development host. Its partial log
showed no failures; no full local-suite pass is claimed. The full hosted
Linux CI aggregate passed on the final commit.
- No live provider calls, runtime changes, or schema changes were made.

## Risks

The classifier is intentionally narrow. A changed provider response
format remains an unknown failure. No global model restriction is
introduced. The worker blocker requires current task authority and does
not replace newer assignments or completed review decisions. A pending
review remains in review and requires an explicit retry after
configuration repair; it is not rebound to a new status decision.

The retry decision is durable. There remains a small existing gap
between status/effect commit and diagnostic metadata persistence; a
crash there can leave a generic diagnostic while preserving the blocked
decision. No schema migration is required.

## Model Used

OpenAI Codex, GPT-6, with reasoning, tool use, and code execution. The
exact serving model suffix and context-window size are not exposed in
this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#123` / `Refs #123` OR (b) described the issue in-PR following the
relevant issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub references)
- [x] My branch name describes the change and contains no internal
ticket id or instance-derived details
- [x] I have run focused tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-05 20:57:33 -07:00
Devin FoleyandPaperclip d21fe31243 Retry pooled execution projection reads after disconnects (#15300)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Task run lists show current execution and recovery state.
> - Their execution projection reads runs, finalizations, pending
interactions, and recovery records.
> - A temporary database disconnect in one lookup makes the run list
fail.
> - This pull request uses the existing bounded retry policy for these
read-only lookups.
> - It keeps transaction reads, authorization, and liveness writes
outside the retry scope.

## Linked Issues or Issue Description

Refs #15248. This extends the same bounded SELECT retry policy to the
execution projection used by task run lists.

A wrapped `CONNECTION_CLOSED` error from the pending-interaction SELECT
makes `GET /issues/:id/runs` fail. These lookups are safe to repeat on
the pooled database connection. The shared projection helper also serves
transaction callers, so retries must remain an explicit opt-in.

## What Changed

- Opt the activity run list into per-query projection retries. Keep the
default path single-attempt for transaction callers.
- Rebuild only the failed SELECT. Use the existing three-attempt limit
and 50/100 ms delays.
- Keep completed reads, route authorization, and liveness backfill
writes outside the retry callbacks.
- Test each query, exhaustion, exact error preservation, non-transient
errors, empty results, transaction defaults, run-list backfill behavior,
and denied route access.
- Document the pooled-read boundary.

## Verification

- Frozen install passed with Node 24.21.0 and pnpm 9.15.4.
- 92 focused tests passed across execution projection, activity
service/routes, prior service-read retries, and the shared retry policy.
- Independent review passed 56 projection, retry-policy, and route
authorization tests with no blocking findings.
- `git diff --check` and the staged diff and PR-text secret/PII scan
passed.
- Full workspace `pnpm -r typecheck` and `pnpm build` passed.
- Greptile scored exact head `78783e84a5` 5/5 with no findings or open
review threads.
- Initial CI had one Runner test timeout: `stops and closes a timed-out
consumer even when the caller requested a warm session` exceeded 5
seconds. Its fixture uses a 1 ms session timeout. The Runner package is
unchanged from the base. The focused case passed locally (1 passed, 138
skipped). One unchanged-head rerun of that job passed all 1,219 Runner
tests and the additional native-runtime integration test. All other CI
lanes passed on the initial run.
- Full Linux CI passed on exact head `78783e84a5`: 53 successful checks,
two intentional Storybook skips, and no pending checks. It provides
aggregate test coverage. A full local aggregate was not launched. The
same host's prior aggregate exposed three known macOS immutable-cache
rename failures in unchanged company-skills code, documented in #15298.

## Risks

- An affected lookup can take up to two additional connection attempts
plus 150 ms of delay. Persistent failures still return the final error.
- The opt-in is only used by the pooled activity read path. No
transaction, mutation, full request, or provider action is replayed.
- No schema or response-shape changes.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, repository editing, code
execution, and independent agent review. The exact deployment model ID
and context window are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub references)
- [x] My branch name describes the change and contains no internal
Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass (focused suites; aggregate
coverage is described above)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-05 20:09:18 -07:00
Devin FoleyandPaperclip 858094ba81 Fix browser polling for unsaved agent chats (#15298)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Agent Chat uses the shared task surface and browser panel.
> - An unsaved chat has a temporary ID instead of a stored task UUID.
> - The browser poll sent that ID to a PostgreSQL UUID query and
returned a server error.
> - This pull request waits for a saved task and validates task IDs
before the query.
> - Saved chats keep their browser tools and access checks.

## Linked Issues or Issue Description

Refs #14331. That report describes the same draft-ID problem in email
requests. This change covers the browser routes; it does not change
email behavior.

Opening an unsaved Agent Chat sends `chat:<agent-id>` to
`/issues/:issueId/browsers` every three seconds. PostgreSQL rejects this
as a task UUID. The draft is only a UI view model. The first send or
upload creates its stored task.

## What Changed

- Disable browser polling for unsaved chat IDs. Resume polling when the
chat has a task UUID.
- Return the existing task-not-found response for malformed task IDs
before database access. Keep board authentication first and company and
credential checks unchanged.
- Test all six task browser routes, draft-to-saved polling, normal
tasks, saved chats, and denied access. Keep canonical UUID v4, v7, and
nil values queryable.
- Document the draft and saved-chat browser contract.

## Verification

- `pnpm install --frozen-lockfile` passed with pnpm 9.15.4 and Node
24.21.0.
- `pnpm exec vitest run
server/src/__tests__/browser-use-route-scope.test.ts
server/src/__tests__/browser-use-connection.test.ts` passed all 35
tests.
- `pnpm exec vitest run ui/src/hooks/useTaskBrowsers.test.ts` passed all
5 tests.
- Independent review passed 14 hook and route tests plus both real task
and saved-chat authorization cases.
- `pnpm check:token-gates` and `git diff --check` passed.
- Full workspace `pnpm -r typecheck` and `pnpm build` passed.
- Full Linux CI passed on `dafff44a32`: 53 successful checks and two
intentional Storybook skips. This includes all general and serialized
test groups, UI and browser tests, typecheck, build, and the canary dry
run. No CI retries were needed.
- The full local `TMPDIR=/private/tmp pnpm test:run` started but did not
complete. It was stopped after full Linux CI passed. Before the stop,
three company-skills cache cases failed on macOS. A focused rerun
reproduced all three as `EACCES` while renaming immutable cache staging
directories. The test, company-skills service, and runtime cache files
are byte-identical to the baseline previously reproduced on `e99854249c`
for #15291. Other local groups were not reached; the full Linux CI run
provides aggregate coverage.
- Greptile scored the exact head `dafff44a32` 5/5 with no findings or
unresolved review threads.

## Risks

- Malformed task IDs now return 404 instead of reaching PostgreSQL and
returning 500. The route does not map draft IDs to agents or tasks.
- No schema, browser provider, task creation, or authorization policy
changes.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, repository editing, code
execution, and independent agent review. The exact deployment model ID
and context window are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub references)
- [x] My branch name describes the change and contains no internal
Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass (focused suites; full local
run limitations are reported above)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-05 19:41:52 -07:00
DottaandPaperclip 0e0b63e5a5 feat(connections): add experimental task-pinned AI routing (#14967)
## Thinking Path

> - Paperclip manages AI agents and their work.
> - AI Connections separate account access from models and harnesses.
> - A pool must act as one connection while retaining each task’s
account.
> - Core must enforce member access and preserve session and recovery
rules.
> - A plugin supplies rotation policy without receiving credentials.
> - This change adds durable routing and native connector setup and
management.

## Linked Issues or Issue Description

**Subsystem affected**

AI Connections, Connectors, plugins, run dispatch, and session
compatibility.

**Problem or motivation**

Operators need to rotate new tasks across saved accounts while each task
keeps its account and session. Pool setup must fit the existing
connector catalog and account workflow.

**Proposed solution**

Add an experimental router binding, a capability-gated plugin hook, and
transactional task pins. Plugins declare native pooled connectors
through `aiConnectionRouter`. Core hosts the existing-account picker,
ordering step, and account settings. Related usage contract: #14936.
Companion private plugin:
https://github.com/paperclipai/paperclip-cloud/pull/643.

**Roadmap alignment**

This extends Apps and AI Connections. Core supplies generic enforcement
and native connector UI; the private plugin owns rotation and quota
policy. The prior duplicate search found no matching router
implementation.

## What Changed

- Add a router binding without changing existing concrete bindings. Keep
the instance flag and new pools disabled by default. Require manual
operator configuration. Show no routing toggle in Experimental settings
on either open-source or Cloud installs, even after routing is enabled.
- Persist company-scoped pools, one shared cursor per pool, and pins
keyed by company, pool, agent, and task. Commit pins and cursor advances
together with revision checks and bounded retries. Persist run-ID
affinity before allocation.
- Pass only authorized metadata and normalized usage to plugins. Core
retains credential handling, member access checks, runtime
qualification, and recovery evidence. Probe outside locks with a shared
15-second budget and freshness cache.
- Resolve routing before credential preparation and backend selection.
Preserve pins through turns, session resets, removed members, and quota
waits. Retain admitted recovery after disable or uninstall.
- Separate credential session epochs from token generations. Verified
refresh preserves the epoch; reconnect and manual replacement change it.
Include the credential slot ID in session and usage-cache identity, so
reconnecting an indexed legacy account invalidates its old session even
when both epochs are zero.
- Validate pool member installations before accepting saved-agent
bindings and recheck compatibility when the harness changes. Install
only authorized members in the new-agent transaction and record their
IDs in local activity. Pool membership cannot install a restricted
shared connection.
- Preserve pool bindings when agents hire teammates through either
creation API or native caller runtime inheritance. Block stale manager
credential references; retain explicit child authentication precedence
and reject incompatible inherited pools.
- Add native connector registration through plugin metadata. Reuse the
Connectors catalog, setup header, account header, sidebar, dialogs, and
usage display. Setup selects and orders saved connections. Advanced
settings hold usage rules and member runtime defaults. New-account setup
opens in another tab.
- Use revision-checked pool archival from the Connectors catalog and
account page. Keep task pins, cursors, recovery evidence, and underlying
connections. Reject ordinary connection updates or removals that bypass
pool revisions.
- Add pool selectors, composer models, override notes, quota status, run
details, activity records, and local run-log records. Keep
session-adoption copy minimal.
- Show **Used by** below the pool connections. List current company
agents with shared avatars and profile links. Include paused agents;
exclude terminated agents and agents using another pool.
- Add Core stories for the generic connector workflow and runtime
surfaces. Cloud stories reuse these production routes and tokens through
a preview-only alias.

## Verification

- Final head `73cb953bca30ed83e4505dd820edd9b5edffd28b`: full workspace
`pnpm -r typecheck`, `pnpm build`, and `pnpm check:token-gates` pass
locally.
- All 422 focused connector/settings/shared-contract/migration tests and
all 156 database-backed AI connection, hiring, reconnect, and
durable-routing cases pass (69 hiring cases rerun after the final
auth-precedence fix). The merged shared contract retains connection
instructions and pool metadata. The pool migration is generated at
sequence 0299 after the latest upstream migrations; this PR makes no
lockfile changes.
- All four full-app Playwright tests pass on the final head after a cold
restart and migration, against the installed private plugin and isolated
database, with no route or pool-API mocks. They cover hidden routing
controls after manual opt-in, native pool creation, ordering, membership
edits, rename, paused defaults, enabling/save/refresh persistence, stale
edits, cancellation/removal, preserved underlying accounts, unavailable
routers, and Used by avatars and profile links. Exact command:
`PAPERCLIP_CONNECTION_POOL_E2E=1
AI_CONNECTIONS_TEST_COMPANY_ID=a37b9625-5ecf-4e29-8081-04df3d6e7d6f
AI_CONNECTIONS_TEST_URL=http://127.0.0.1:3108 pnpm exec playwright test
--config tests/ai-connections-app/playwright.config.ts
connection-pools.spec.ts`.
- [Native setup, ordering, and management
screenshots](https://github.com/paperclipai/paperclip/pull/14967#issuecomment-6006976278)
address the review follow-up. [Earlier selector, quota, and run-detail
screenshots](https://github.com/paperclipai/paperclip/pull/14967#issuecomment-5971537316)
show the runtime surfaces. Core previews: `pnpm --filter @paperclipai/ui
storybook`, then **Connectors / Pool host** or **AI Connections /
Connection pools**. Cloud owns its host-backed plugin stories; both
repositories’ Operator Setup Required story assertions pass.
- Live acceptance used OpenAI/Codex and Anthropic/Claude ACPX, resumed
both exact sessions after restart, preserved pinned accounts through
explicit reset and controlled quota deferral/recovery, and committed
only two allocations across fourteen runs. A later UI-created task test
again rotated OpenAI then Anthropic and resumed OpenAI through
follow-up/restart/quota recovery. That later Anthropic execution was
blocked by its saved OAuth token expiring (provider 401). No live usage
probes ran.
- The full local `pnpm test:run` was attempted earlier and did not
complete because of macOS embedded PostgreSQL bootstrap/shared-memory
failures and the 40,000-file Git fixture timeout. The focused database
suites above now pass; full-suite verification is provided by the split
CI lanes. The preceding CI run had one runtime readiness timeout; it
passes locally both alone and inside the larger runtime suite. That
larger local suite also encountered an embedded PostgreSQL setup failure
and two macOS temporary-path alias assertions; those two assertions pass
with canonical TMPDIR=/private/tmp. All final-head CI checks are
terminal green, including full general/serialized server suites, Runner
checks, browser E2E shards, canary verification, build, and typecheck.
Greptile is 5/5 on that exact head with no unresolved threads.

## Risks

- The migration adds routing tables and a credential epoch column.
Install the private plugin only with the compatible Core contract.
- Routing and each pool require opt-in. Production distribution and
fleet defaults remain unchanged.
- Unknown usage stays eligible. Known pinned exhaustion waits; revoked
access requires operator repair.
- Legacy adapters require compatible members. Runner model and effort
overrides remain limited by qualified backend support.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, repository editing, code
execution, and browser testing. The exact deployment model ID and
context window are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes:` / `Closes:`
/ `Refs:` OR (b) described the issue in-PR following the relevant issue
template
- [x] I have not referenced internal/instance-local Paperclip issues or
links
- [x] My branch name describes the change and contains no internal
Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass (targeted suites;
full-suite limitations are reported above)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-05 20:44:37 -05:00
DottaandPaperclip 72ff3a9f27 Measure native tool context and expand bounded workflow evals (#15218)
## Thinking Path

> - Paperclip manages persistent agents and their assigned work.
> - Agents receive both fixed instructions and tool definitions.
> - Moving a procedure into a tool description still adds model context.
> - We need to measure the complete delivered catalog and test real
outcomes.
> - The tested reductions saved little space and introduced failing
outcomes.
> - This PR keeps measurement, bounded eval coverage and the original
evidence.
> - Production prompts, tools and runtime behavior stay unchanged.

## Linked Issues or Issue Description

Refs: #15151, #14961, #14948, #14985.

This adds the measurement and eval coverage needed to assess further
native
instruction changes. The attempted hiring and dependency reduction
failed
qualification and is excluded from the final diff.

## What Changed

- Measure the actual standard-mode tool authority, including all 39
tools and their input schemas. Capture scripted native start, resume and
continuation payloads and the OpenCode MCP declaration list.
- Add OpenCode to the two explicit-only local hiring/reuse and
delegation/feedback stories. Preserve the original task requests and
independent oracles.
- Apply one attempt per selected story and explicit company and
lead-agent budget stops.
- Select managed hiring credentials from the requested profile,
including OpenRouter.
- Run the existing Node test files under Node instead of collecting them
as Vitest suites.
- Retain sanitized comparison reports, original failed grades, source
hashes and evidence gaps.

## Verification

Final source: `2e7cef78eef7cdfe02265e0dcb03e855b8e50bd8`. Local
verification passes:

- Full repository `pnpm -r typecheck` and `pnpm build`.
- Eval-support unit tests: 1,252 Vitest checks and 128 Node checks.
- Eval TypeScript check and six final-source measurement tests. All 36
normalized
components across nine scripted deliveries and the OpenCode MCP catalog
match
the baseline exactly; the complete standing projection is 49,200 bytes.

Fresh review of this exact head is [5/5 with no remaining
findings](https://github.com/paperclipai/paperclip/pull/15218#issuecomment-5996723170);
all three review threads are resolved.
[Final-head
CI](https://github.com/paperclipai/paperclip/actions/runs/37354539126)
passes all 47 jobs, including repository typecheck, build, tests, runner
checks,
browser shards and the canary check. One initial annotation-test timeout
is
retained in attempt 1; its seven-test suite passed locally, and the
affected
CI lane passed on one targeted retry. No source or paid eval rerun was
needed.

Both ready-transition security scans passed with zero annotations. The
PR is
out of draft and conflict-free. GitHub still requires code-owner
approval for
the `package.json` test-script change; its requested reviewers are
already set.

A byte-for-byte comparison against master context
`a65ca0950834a85bb93bcc4b4042ecacdebfef53` confirms no production
changes under
`packages/` or production `server/` paths. The only server addition is a
measurement test. No new paid rerun is needed to compare unchanged
production
bytes. This does not claim that existing product defects have been
fixed.

The rejected corrected experiment had baseline **5 PASS / 1 FAIL** and
candidate
**3 PASS / 3 FAIL**, including **two newly failing pairs**. The later
readiness
experiment had candidate **3 PASS / 3 FAIL** and baseline **3 PASS / 2
FAIL / one
setup cell without a behavioral grade**. Its five comparable pairs had
two new
failures, two new passes and one unchanged pass. The missing baseline
Codex
cell never reached its provider step because Docker setup timed out.

The observed missing behaviors include parent continuation, waiting for
the
latest child revision, revised ZIP delivery and OpenCode credential
persistence.
Those failures remain failures. Source review and passing CI do not
regrade them.
The original reduction saved 460 bytes; its first repair saved only 125
bytes,
and the larger unqualified runtime repair increased the full projection.
None
of those production changes is shipped here.

Read the
[report](https://github.com/paperclipai/paperclip/blob/2e7cef78eef7cdfe02265e0dcb03e855b8e50bd8/doc/plans/2026-10-05-native-procedure-guidance.md)
and its linked sanitized receipts for exact
sources, original campaign links, pair-level results and evidence
limitations.

## Risks

- Full-catalog bytes are not model tokens, invoices, private vendor
prompts, lazy-loading behavior or truncation proof.
- The two stories are explicit-only and do not prove general coding
quality or arbitrary resume behavior. Single trials do not establish
causation or performance trends.
- The retained OpenCode candidate credential guard failed. Cleanup
removed the original provider database, so the precise persistence
mechanism remains unknown. The guard is unchanged.
- ACPX provider-execution IDs lack proven host-call mapping. No
extra-work or feedback-consumption claim is inferred by matching names,
order or counts.
- PostgreSQL cannot start locally while the host's shared-memory slots
are exhausted. Hosted CI must supply the full database checks; the full
local database suite is not claimed green.

## Model Used

OpenAI Codex, based on GPT-6, with repository tools and code execution.
The exact deployment model ID and context-window limit are not exposed
in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-05 20:03:35 -05:00
Devin FoleyandPaperclip efac8ff2f4 Add bounded Git integration restore diagnostics (#15291)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Sandbox runs must restore their workspace before finalization can
succeed.
> - Restore diagnostics identify the failed phase and operation.
> - A Git integration exit code can still describe several different
failures.
> - This pull request adds fixed command labels and supported failure
classes.
> - Operators can distinguish these failures without collecting private
Git output.

## Linked Issues or Issue Description

Refs #15005. This branch includes merged #15268. It labels that change's
locked ref transaction and nested branch probe without changing their
behavior.

**What happened?**

A failed Git integration can report only `git_integration`, `unknown`,
and an exit code. That evidence does not identify the failed command.
Some Git versions also return exit 1 for both a merge conflict and an
invalid object.

**Expected behavior**

Record a fixed command family and a supported failure class. Keep
unknown cases as `unknown`. Exclude command arguments, process output,
paths, repository URLs, filenames, and ref names.

**Steps to reproduce**

The tests create local repositories with conflicting commits, a missing
object, and an expected-old ref mismatch. They call the real Git
operations and inspect the resulting diagnostic. No hosted workspace or
external provider is used.

**Paperclip version or commit**

Base: `e99854249c`.

**Deployment mode**

Built from source. The diagnostic applies to sandbox workspace restore.

## What Changed

- Label Git integration calls with a closed command enum. Preserve
arguments, options, errors, and retry behavior.
- Recognize supported object and ref errors and OS permission codes.
Require both exit 1 and completed tree output for a merge conflict.
- Carry the closed fields through the existing restore receipt, saved
adapter result, and Sentry projection. Revalidate saved metadata before
projection.
- Test nested wrappers, parallel failures, reused errors, handled
probes, result settlement, and privacy with the real Sentry SDK.
- Document the field contract and its limits.

## Verification

- Eight focused suites pass: 295 tests. These cover Git sync, restore
diagnostics, result settlement, teardown, sandbox runtime, failure
projection, the real Sentry SDK, and native warm-workspace Git history.
- `PAPERCLIP_REQUIRE_SENTRY_TEST_SDK=1 pnpm exec vitest run
packages/adapter-utils/src/workspace-restore-diagnostics.test.ts
packages/adapter-utils/src/workspace-restore-result.test.ts
packages/adapter-utils/src/git-workspace-sync.test.ts
packages/adapter-utils/src/workspace-restore-teardown.test.ts
packages/adapter-utils/src/sandbox-managed-runtime.test.ts
server/src/services/__tests__/run-failure-diagnostics.test.ts
server/src/__tests__/run-failure-sentry-real-sdk.test.ts
server/src/__tests__/native-workspace-sync-history.test.ts`
- Local checks use Node 24.21.0 and the pinned pnpm 9.15.4. The optional
Sentry SDK is pinned to the declared 10.71.0 and uses an in-memory
transport.
- `pnpm -r typecheck` and `pnpm build`: pass on the rebased head.
- The full local `pnpm test:run` was stopped before source changes when
#15268 merged and required a rebase. It reported three pre-existing
company-skill cache test failures on macOS. The same three cases fail on
clean bases `2c43b39167` and `e99854249c` and the earlier head with
`EACCES` when publishing a read-only cache directory. The relevant test,
service, and cache source blobs are identical. No cache changes are
included. Later local test groups were not reached.
- All 54 checks pass on exact head `8448896bc6`, including the
post-ready security scan, with two intentional Storybook skips. Greptile
scores this head 5/5 with no review threads. Full Linux CI covers the
local groups that were not reached.
- Independent review found no blocker. Its diagnostics, Git workspace,
and native history suites pass 115/115 on this head.
- A source comparison confirms that removing only diagnostic wrappers
yields the merged upstream Git integration code exactly, including ref
locks, transaction protocol, arguments, options, and retry decisions.
- The clean base has stale dependency overrides in its lockfile. Local
installation resolved them as the existing PR CI fallback does. No
manifest or lockfile change is included.
- `git diff --check` and a local secrets/PII review pass.

## Risks

A Git version or localized message may not match a known failure form.
Such cases remain `unknown`. Up to 16 KiB of stderr and the bounded
tree-ID prefix of stdout are inspected only in memory. The saved fields
contain enum values only. These diagnostics do not establish workspace
recovery or authorize retries. Restore decisions and Git mutations are
unchanged. No schema migration is required.

## Model Used

OpenAI Codex, GPT-6, with reasoning, tool use, and code execution. The
service does not expose the exact model deployment ID or context-window
size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-05 17:10:05 -07:00
Devin FoleyandPaperclip e99854249c fix(workspaces): restore rebased sandbox history against its starting snapshot (#15268)
## Thinking Path

> - Paperclip manages agents and preserves their work across runs.
> - Sandbox execution restores Git history and files to the host
workspace.
> - An agent can rebase or amend its branch before it finishes.
> - Restore currently treats the original and rewritten tips as
concurrent work.
> - That merge can conflict even when the host has not changed.
> - This change uses the starting Git snapshot to accept rewritten
history safely.

## Linked Issues or Issue Description

**What happened?**

A successful sandbox turn can end with `workspace_restore_failed` after
the agent rebases and pushes its branch. The restore step merges the
original host tip with the rewritten sandbox tip. This can recreate
conflicts that the agent already resolved.

**Expected behavior**

Accept the rewritten history when the host still has the recorded
starting branch and commit. Preserve concurrent host work through the
existing merge and recovery paths.

**Steps to reproduce**

1. Start a sandbox from a feature branch.
2. Rebase that branch onto an upstream commit that changes the same
file. Resolve the conflict in the sandbox.
3. Restore the sandbox while the host remains on the original commit.
4. The old implementation attempts a conflicting Git merge and fails the
run after the agent finishes.

**Paperclip version or commit**

Reproduced on `cab4263dc9` with a real Git rebase fixture.

**Deployment mode**

Self-hosted server with sandbox execution.

Related work: #15005 records restore failure stages. #11638 preserves
unrelated imported history with a graft. #10601 handles bundle
prerequisites. Those changes do not distinguish a rebase from a
concurrent host edit.

## What Changed

- Pass the run's starting Git branch and commit into sandbox history
integration.
- Adopt a related rewritten tip when the host still matches that
snapshot. Keep the expected-old-value ref update and bounded retry.
- Verify the branch attachment inside a prepared Git transaction while
Git holds its ref locks. Abort if a checkout changed the branch.
- Check host and sandbox Git identity before warm reuse, including
nested repositories. Restage when their tips or branches differ.
- Reject host branch changes and unrelated imports after a concurrent
host commit.
- Retain the existing unrelated-history graft for an unchanged host and
the conservative behavior for callers without a snapshot.
- Export a full bundle for an intentional reset to an ancestor so
restore receives the actual sandbox tip.
- Add real Git and sandbox restore regressions. Document the restore
contract.

## Verification

- Eight Git sync, sandbox restore, and native workspace suites pass: 255
tests.
- The new checkout-race and warm-reuse regressions failed before the
fixes. Real Git hooks verify that prepared transactions prevent a
concurrent HEAD change.
- `pnpm -r typecheck` passed after rebasing onto `984f092ddf` and
applying the Apex findings.
- `pnpm build` passed on `f5132603d6`.
- The earlier `pnpm test:run` attempt reported three
`company-skills-service.test.ts` failures on macOS (`EACCES` renaming a
read-only staging directory). The same failures reproduced on unchanged
master. The broader run was stopped after confirming that baseline
failure; it was not a full-suite pass. Those source and test files are
unchanged in the current base.
- [Apex
review](https://github.com/paperclipai/paperclip/pull/15268#issuecomment-6002549219):
5/5 on `f5132603d6`, requested with `@greptileai apex review`. All three
historical findings are addressed and all review threads are resolved.
- All CI gates passed on `f5132603d6` (53 successful checks, two
skipped). The signoff-policy browser fixture initially timed out waiting
for a local process-agent run; its one retry passed without code
changes. [CI
run](https://github.com/paperclipai/paperclip/actions/runs/37387511152)

## Risks

- A recorded starting snapshot now authorizes replacement of related
rewritten history. A stale or changed host tip retains the
concurrent-history path. Ref writes still compare the expected old
commit.
- Branch changes and unrelated rewrites after host advancement require
recovery instead of replacing host work.
- An intentional reset to an ancestor uses a full bundle. Large
histories can increase transfer time in that case.
- The existing directory merge rules remain in force. The fix does not
resolve an earlier failed restore or replay its external actions.

## Model Used

OpenAI GPT-6 via Codex, with reasoning, repository analysis, code
editing, and local test execution. The exact deployment model ID and
context window were not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass — 255 affected tests; the
broader-suite baseline failure is documented above
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-05 16:43:15 -07:00
DottaandPaperclip 4857799a88 feat(connections): deliver saved instructions to authorized agent turns (#15216)
Persist optional connection instructions and deliver authorized snapshots to agent execution prompts. Keep provider templates with each app definition, preserve edits and opt-outs, and replace sessions when guidance or access changes.

Use shared production settings across setup and Permissions, with source visibility in agent Instructions. Add the initial memory-provider defaults and managed Honcho workspace configuration. Include migration 0298 and regression coverage for generic providers, runtime delivery, authorization, and catalog regeneration.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-05 18:16:00 -05:00
Nicky LeachandPaperclip 984f092ddf Add project and agent resource lifecycle hooks (#15280)
## Thinking Path

> - Paperclip manages agents and projects for work.
> - Plugins need reliable lifecycle hooks for these resources.
> - In-process notifications can disappear during a restart.
> - A lifecycle record must commit with the resource change.
> - This pull request adds a generic lifecycle journal without provider
calls.
> - A later plugin delivery layer can use these records without losing
lifecycle changes.

## Linked Issues or Issue Description

**Problem or motivation**

Resource provisioning needs durable hooks for agent hiring, pause,
resume, termination, and project creation. Hooks must cover shared
service callers, budget actions, and approval paths. Capture should work
for all plugins and deployment modes.

**Proposed solution**

Record content-free events in the resource transaction. Deduplicate
creation and unchanged status. Preserve each pause/resume cycle. Commit
approval, activation, and creation together. Commit termination and
API-key revocation together.

**Alternatives considered**

Event subscriptions alone cannot survive process failure. Cloud-only
capture would exclude other plugins. Provider calls inside tenant
transactions would couple resource creation to external services.

**Roadmap alignment**

This is lifecycle infrastructure for the existing plugin system. It adds
no provider, adapter, UI, or plugin read API. Repository mutations and
backfill remain separate work. Searches found no duplicate
lifecycle-journal PR.

## What Changed

- Add a company-scoped lifecycle journal and an additive migration.
- Record hired-agent and project creation from shared services.
- Record agent pause, resume, and termination, including generic updates
and budget actions.
- Lock agent state changes to suppress concurrent duplicate hooks.
- Make hire approval, rejection, and termination transactions atomic
with their lifecycle records.
- Document capture, ordering, future per-plugin acknowledgments, and
migration scope.

## Verification

- Full workspace typecheck: `pnpm -r typecheck` passed.
- Production build: `pnpm build` passed.
- Focused agent, project, approval, budget, and built-in regressions:
102 tests passed across 9 suites.
- Final lifecycle journal check: 14 tests passed. It covers
repeated/concurrent transitions, rollback, key revocation, self-hosted
capture, and company boundaries.
- Review regression: 32 lifecycle and approval tests passed, including
rejected-hire rollback and retry; server typecheck passed after the fix.
- The initial local `pnpm test:run` overlapped the rejection fix and
reported the new rollback regression against the earlier service code. A
fresh lifecycle run passed all 14 tests. Fresh full local shards were
stopped once the complete CI test matrix passed on the final commit.
- `git diff --check` and a local secret/PII scan passed.
- Greptile: 5/5 on `3ee3903f8e1a171ea3ba2bea9caa2b5766a3f807`, with the
review thread resolved.
- [Complete CI
passed](https://github.com/paperclipai/paperclip/actions/runs/37374227222)
on `3ee3903f8e1a171ea3ba2bea9caa2b5766a3f807`: general
server/chat/workspace tests, serialized server suites, runner checks,
build, typecheck, canary, and all end-to-end shards. The requester
waived CI during the Actions outage, but the workflow subsequently
completed successfully.

## Risks

- The migration creates an empty table. It does not scan or backfill
existing resources.
- Apply the normal database migration before running this server
version. Event-write failure intentionally rolls back the resource
change.
- Pending hires cannot bypass approval through pause or resume.
- Capture works on all deployments. Plugin delivery, retention, retries,
and provider actions remain separate work. No plugin can read this
journal through a new API in this PR.
- Future delivery must enforce company scope, track acknowledgments per
plugin, and preserve resource order. A global sequence cursor can skip
uncommitted transactions.
- A termination hook does not authorize deleting persistent volumes.

## Model Used

OpenAI Codex, based on GPT-6, with reasoning, repository inspection,
code execution, and tool use. The exact deployment model ID and context
window are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-05 15:58:38 -07:00
6c36c07a4f feat(adapters): add GPT-6.1 Sol and refresh shared coding harness pins (#14942)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Agents run through coding-agent adapters and the native runner. Both
use the same installed provider CLIs, model catalogs, and reasoning
controls.
> - OpenAI released GPT-6.1 Sol (`gpt-6.1-sol`) in Codex. Anthropic
released Claude Sonnet 5.5. The static Codex, Bedrock, and OpenCode
catalogs do not list these IDs.
> - The shared provider pack pins Codex 0.156.0 and OpenCode 1.18.32.
The evaluation image pins older Grok, Gemini, Kimi, Cursor, and GitHub
CLI releases. Codex 0.156.0 has no bundled metadata for GPT-6.1 Sol.
> - A model entry without a current harness, or a harness pin without
its runner integrity checks, fails at run time.
> - This pull request adds the verified model IDs and moves the harness
pins, executable digests, controller checks, and image pins together.
> - The benefit is that operators can select the current models, and the
native and local adapters share one current CLI installation.

## Linked Issues or Issue Description

Refs #13829 and #13838 (the September 22, 2026 model and harness
refresh). Related pull requests: #14993 (merged October 5, 2026,
superseding #14816) added the direct Claude Sonnet 5.5 entry and
refreshed the Claude runtime to Agent SDK 0.3.286 / Claude Code 2.1.286.
This pull request does not change the Claude runtime or the direct
Claude model list; it keeps the #14993 pins and adds only the Bedrock
Sonnet 5.5 ID. After #14993 merged, this branch was rebased onto
`master` (October 5, 2026). The six overlapping pin regions
(`docker/daytona-runner/Dockerfile`, `docker/daytona-runner/README.md`,
`package.json`, `pnpm-workspace.yaml`,
`packages/adapters/claude-local/src/index.test.ts`,
`packages/paperclip-runner/src/backends/native-backend-factory.test.ts`)
were resolved by keeping this pull request's Codex 0.160.0 and OpenCode
1.18.34 pins next to #14993's Claude 0.3.286 / 2.1.286 pins, taking the
union of the Sonnet 5.5 model IDs in the Claude test, and merging both
README paragraphs. The Sonnet 5.5 effort and CLI-gate lines in the
Claude adapter were identical in both pull requests and merged without a
diff. #14917 and #14918 reordered the Claude and Codex model lists
earlier; the new entries sit where those ordering rules put them.

Sources checked on 2026-10-02:

- [OpenAI Codex models](https://learn.chatgpt.com/docs/models): GPT-6.1
Sol uses `gpt-6.1-sol`, supports reasoning efforts from Light to Ultra,
and has Standard and Fast modes at launch. The page also records that
`gpt-5.4` and `gpt-5.4-mini` retired from Codex with ChatGPT sign-in on
August 31, 2026, and that `gpt-5.5` retires on October 14, 2026. Neither
retirement applies to the OpenAI API.
- [Codex CLI releases](https://github.com/openai/codex/releases) 0.157.0
through 0.160.0. The bundled model metadata in the 0.160.0 Linux binary
contains `gpt-6.1-sol`.
- [Claude Sonnet
5.5](https://platform.claude.com/docs/en/models/sonnet-5-5/overview):
Bedrock ID `anthropic.claude-sonnet-5-5`, released September 28, 2026.
- [OpenCode releases](https://github.com/anomalyco/opencode/releases)
1.18.33 and 1.18.34 (fixes only). The OpenCode model registry lists both
added provider-qualified IDs.
- npm `latest` tags for `@xai-official/grok` 1.0.46,
`@google/gemini-cli` 0.62.0, and `@moonshot-ai/kimi-code` 2.1.1.
[xAI](https://docs.x.ai/docs/models),
[Google](https://ai.google.dev/gemini-api/docs/models), and
[Kimi](https://www.kimi.com/code/docs/en/kimi-code/models.html) list no
newer coding models.
- Cursor CLI 2026.10.01-e373342 is the version the official installer
resolves. The pinned digest is the SHA-256 of the versioned Linux x64
archive.
- [GitHub CLI 2.102.0](https://github.com/cli/cli/releases/tag/v2.102.0)
(security fixes). The pinned digest matches the release `checksums.txt`.

## What Changed

- Codex adapter: add `gpt-6.1-sol` to the model list, the Fast mode
list, and the Ultra effort set. It is the first entry: #14918 orders the
list newest version first, and its description notes the ChatGPT app
lists GPT-6.1 Sol first. Update the adapter documentation text.
- Claude adapter: add `us.anthropic.claude-sonnet-5-5` (Bedrock Sonnet
5.5) to the Bedrock catalog in the newest-Sonnet slot after Opus 5.5;
`us.anthropic.claude-sonnet-5` moves into the older-Sonnet group,
matching what `sortClaudeModels` from #14917 produces at runtime. Any
Sonnet 5.5 ID (direct or Bedrock-qualified) now gets the documented
`xhigh` and `max` efforts and requires Claude Code 2.1.284 or later on
the CLI lane (the Claude Code changelog entry for 2.1.284 adds
`claude-sonnet-5-5`). These two lines are identical to the ones #14993
merged, so the branch carries no diff for them.
- OpenCode adapter: add `openai/gpt-6.1-sol` and
`anthropic/claude-sonnet-5-5` to the static fallback catalog.
- Codex runtime pin 0.156.0 → 0.160.0 in the root and workspace
overrides, the runner package, the Codex ACP package patch, the
qualified ACPX profiles, the Linux x64 executable digest, the Rust
provider backend and its tests, the provider-pack manifest pins, the
remote controller pins, the sandbox npm install spec, and the opt-in
qualification scripts.
- Remote Codex compatibility window: upper bound 0.157.0 → 0.161.0. The
minimum stays at 0.149.0.
- OpenCode runtime pin 1.18.32 → 1.18.34 in the runner package, the
materialization script, the server and Rust qualified versions, the eval
and live-session labels, fixtures, and the configuration label.
- Evaluation image (`docker/daytona-runner/Dockerfile`): Grok CLI
1.0.46, Gemini CLI 0.62.0, Kimi Code 2.1.1, Cursor CLI
2026.10.01-e373342 with its digest, GitHub CLI 2.102.0 with its digest,
Codex and OpenCode version probes, and the refreshed lockfile digest.
The Claude Code 2.1.286 probe comes from #14993 and is unchanged here.
- `pnpm-lock.yaml` is not part of this pull request. The repository's
pull request gate rejects lockfile edits, and the refresh bot
regenerates the lockfile on master (the same flow #13838 used). The
Dockerfile `PAPERCLIP_RUNNER_LOCK_SHA256` default is the digest of the
lockfile that `pnpm install --resolution-only --ignore-scripts
--no-frozen-lockfile` (the refresh workflow's command) produces for the
combined pins on the rebased branch (`e1856797…`); that lockfile differs
from master only in the `@openai/codex` 0.160.0 platform packages, the
`@anthropic-ai/claude-agent-sdk` 0.3.286 override that #14993 introduced
(the open refresh-bot pull request #14872 carries that part),
`opencode-ai` 1.18.34 with its Linux x64 baseline, and the `codex-acp`
patch hash.
- Documentation: runner README, runner compatibility doc, environment
variable example, and a new `doc/adapter-model-audit-2026-10-02.md` with
sources and deferred items.
- Tests: Codex adapter catalog, server adapter models, Codex
compatibility window, native session executor pins, runner package
contract, OpenCode materialization, and UI effort options.

Unchanged on purpose: Claude Agent SDK 0.3.286 / Claude Code 2.1.286
(already on `master` from #14993), ACP bridges (`acpx` 0.13.1,
`claude-agent-acp` 0.73.0, `codex-acp` 1.6.2; newer upstream releases
need a separate qualification), the native Grok runtime 1.0.13, Pi
0.84.2 / 0.87.1 (the Pi 1.0 runner stack covers it), and Hermes 0.19.0
(current). `gpt-5.4` and `gpt-5.4-mini` stay in the picker because the
OpenAI API still serves them.

## Verification

Run on Linux x64 with Node 25.9.0 and pnpm 9.15.4 after `pnpm install
--no-frozen-lockfile` (the refreshed lockfile stays local; see above).
The results below were re-run on the rebased head (October 5, 2026) for
the suites the conflict resolution touches; the other rows are from the
original run and are covered by CI on every push:

- Rebased head: `packages/adapters/codex-local` 482 passed;
`packages/adapters/claude-local` 340 passed, 4 failed (`execute.remote`,
`test.probe`, `execute.acp-fallback`, `acp` spawn/env-hardening cases
that fail identically on unchanged `master` in this host environment);
`server` adapter-models + codex-runtime-compatibility +
native-session-executor + adapter-registry 607 passed, 1 failed (the
same adapter-registry override-pause case as before, also failing on
`master` here); `packages/paperclip-runner` native-backend-factory +
qualified-profiles 36 passed; `ui` codex-reasoning-effort +
config-fields + model-utils 19 passed. Rust, full typecheck, build, and
the Docker image are left to CI as before.

- `vitest run` in `packages/adapters/codex-local`: 13 passed. `vitest
run` in `packages/adapters/claude-local` (whole package, including the
new Sonnet 5.5 gate and effort tests): see the latest CI run and the
comment below. `vitest run` in `packages/adapters/opencode-local`: 48
passed, 1 failed (`runtime-config.test.ts` reads the host
`PAPERCLIP_OPENCODE_PROVIDERS` variable; it fails the same way on the
unchanged base).
- `vitest run src/__tests__/adapter-models.test.ts
src/services/native-runtime/codex-runtime-compatibility.test.ts
src/__tests__/adapter-registry.test.ts` in `server`: 84 passed, 1 failed
(`adapter-registry.test.ts` override pause test; it fails the same way
on the unchanged base).
- `vitest run` in `ui` for `codex-reasoning-effort`,
`agent-setup-fields`, `config-fields`, and `ComposerRunSettingsPicker`:
25 passed.
- `node --test test/acpx-codex-package-contract.test.mjs
scripts/materialize-opencode-binary.test.mjs
scripts/runner-protocol-eval-campaign.test.mjs` in
`packages/paperclip-runner`: 23 passed. The package contract test
verifies the installed Codex ACP executable digest and the 0.160.0 patch
pin.
- `vitest run src/drivers/acpx src/backends src/drivers/opencode
src/live/live-session.test.ts` in `packages/paperclip-runner`: 626
passed, 5 failed, 1 skipped. The 5 failures
(`installation-integrity.test.ts` `/proc/self/fd` module loading and one
OpenCode answer-selection test) also fail on the unchanged base under
Node 25; Linux CI runs Node 24.
- `pnpm run test:opencode:qualification` in `packages/paperclip-runner`
against the installed OpenCode 1.18.34 executable: passed.
- `codex --version` from the installed pack prints `codex-cli 0.160.0`.
The Linux x64 executable digest `12eb3e81…652aad` was computed from the
`@openai/codex@0.160.0-linux-x64` archive after checking its registry
`dist.integrity`.
- `pnpm check:token-gates`: all gates clean.
- `pnpm run typecheck:typescript` in `packages/paperclip-runner`:
passed. Package typechecks ran one at a time; see the comment below for
the server and UI results.

Not run here, and needed from CI:

- Rust tests and `pnpm -r typecheck` / `pnpm build` for the server (no
`cargo` in this environment; the server typecheck prepares the runner
vendor build).
- The Docker evaluation image build and the real-binary Codex startup
and session-resume probes (no Docker; the probes need the compiled
`paperclip-runnerd`). The trusted CI runner workflow covers them.
- Authenticated inference with any new model. This change is metadata
and startup validation only.

## Risks

- Codex 0.160.0 changes the bundled model catalog and app-server
behaviour (authoritative provider catalogs, incremental running-turn
tracking). The patched `codex-acp` 1.6.2 bridge is unchanged and
declares `^0.148.0`; it worked with 0.156.0 under the same override. If
CI probes show a protocol change, the pin can return to 0.156.0 by
reverting this pull request.
- The compatibility window upper bound moves to `<0.161.0`. Remote
images with Codex 0.157 to 0.160 become accepted. Older images stay
accepted down to 0.149.0.
- Until the refresh bot lands the regenerated lockfile on master, the
Dockerfile lockfile digest default does not match the committed
lockfile. The trusted CI workflow computes the digest from its own
resolution at build time, so this affects only a local build that passes
no digest.
- Existing saved model selections and effort settings are not changed.
Agents on `gpt-5.4` or `gpt-5.5` with ChatGPT sign-in need a model
change before the OpenAI retirement dates; that is documented, not
enforced.
- Rollout order: deploy the controller and runner from this change
before promoting a sandbox image that carries these pins. Older
controllers reject the new provider-pack pins.

## Model Used

- Claude Fable 5.1 (Anthropic, model ID `claude-fable-5-1`), 1M context
window, adaptive thinking, tool use. The model ran as a Paperclip agent
through the Claude Code harness, performed the web research, edited the
code, and ran the tests listed above.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Bender (Fable) <noreply@paperclip.ing>
Co-authored-by: devinfoley <139239+devinfoley@users.noreply.github.com>
Co-authored-by: Claude Fable 5.1 <noreply@anthropic.com>
2026-10-05 13:59:08 -07:00
Nicky LeachandClaude Sonnet 5 41c1431d66 fix(server): remove the fixture-cleanup deadlock in the stale queued-run test (#14968)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The server heartbeat tests use shared database fixtures and
concurrent run execution.
> - The stale queued-run test checked the database before all active
executions finished.
> - A late run writer could then hold a row lock while fixture cleanup
held another table lock.
> - PostgreSQL could report a deadlock, and the test cleanup could fail.
> - This pull request waits for active executions and shares the
deadlock retry helper.
> - The benefit is reliable test cleanup without a production code
change.

## Linked Issues or Issue Description

Refs: #14198

**What happened?**

The stale queued-run test could fail during fixture cleanup. Its cleanup
poll could miss a run that had not written its database row. A later
writer could then deadlock with the cleanup `TRUNCATE` operation.

**Expected behavior**

Fixture cleanup must wait for active run executions. It must retry
transient PostgreSQL deadlocks and foreign-key races.

**Steps to reproduce**

1. Run the server heartbeat tests with concurrent test activity.
2. Let an active run write its database row after the cleanup poll
starts.
3. Observe a PostgreSQL `40P01` deadlock during fixture cleanup.

**Paperclip version or commit**

`master` at the base commit for this pull request.

**Deployment mode**

Test-only change against the server test database.

## What Changed

- Replace the local cleanup poll with `drainHeartbeatRunsToQuiescence`.
- Add the shared `truncateTablesWithDeadlockRetry` test helper.
- Retry PostgreSQL `40P01` deadlocks and the existing foreign-key race.
- Use the shared helper in both heartbeat test files.
- Remove the private duplicate helper.
- Change no production code.

## Verification

- `vitest run
server/src/__tests__/helpers/truncate-with-deadlock-retry.test.ts`
passes.
- `vitest run
server/src/__tests__/heartbeat-active-run-output-watchdog.test.ts`
passes.
- The target stale queued-run test passes in the engineer validation
run.
- CI must confirm the full stale queued-run test file and the required
server checks.

## Risks

Low risk. This change affects test cleanup only. The helper keeps a
bounded retry count and rethrows persistent errors.

The full stale queued-run test file needs CI because the local sandbox
lacks the managed Codex home required by an existing pre-dispatch
credential gate.

## Model Used

OpenAI Codex, GPT-5, with tool use and code review assistance.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` /
`Closes: #` / `Refs: #` OR (b) described the issue in-PR following the
relevant issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes (no
documentation change is needed for this test-only change)
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

## Test plan

- [x] CI `General tests` passes for the `server` shards.
- [x] CI `verify` passes.
- [x] `vitest run
server/src/__tests__/helpers/truncate-with-deadlock-retry.test.ts`
passes.
- [x] `vitest run
server/src/__tests__/heartbeat-active-run-output-watchdog.test.ts`
passes.
- [x] `vitest run
server/src/__tests__/heartbeat-stale-queue-invalidation.test.ts` passes.

## Note on the sandbox test gap

The engineer could not run the full
`heartbeat-stale-queue-invalidation.test.ts` file green in the
development sandbox. A pre-dispatch credential gate in `heartbeat.ts`
needs a usable Codex home for `codex_local` agents, and that sandbox has
no managed home. The engineer proved the failure is pre-existing: they
stashed both test-file changes, reran the unmodified file, and got the
identical 25 failures with the identical error. CI supplies the
full-file run. Treat the CI result for this file as the authoritative
check.

Co-authored-by: Claude Sonnet 5 <noreply@anthropic.com>
2026-10-05 13:50:26 -07:00
DottaandPaperclip b43073d11f feat(connections): sync and group accounts managed by aggregators (#15254)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Connections give agents governed access to external tools.
> - Aggregator gateways can expose accounts that users already connected
upstream.
> - The Apps catalog did not show those accounts or their current
provider status.
> - Separate cards and setup tasks also made account ownership unclear.
> - This pull request discovers upstream accounts and groups them under
one app card.
> - Users can find connected apps while each provider keeps control of
its accounts.

## Linked Issues or Issue Description

**Subsystem affected**

Connections across the database, shared contracts, server, and board UI.

**Problem or motivation**

Users cannot see which apps are connected through a saved aggregator
gateway. Native and upstream accounts need one app card. Discovery must
preserve company, user, gateway, and credential boundaries.

**Proposed solution**

Sync account metadata from Composio, Arcade, and supported Executor
gateways. Keep upstream account management in each provider. Use source
chips and search to browse the catalog. Preserve native setup and the
gateway's existing access policy.

**Alternatives considered**

Creating a local executable connection for each upstream account would
duplicate authorization state. Using an agent task for routine Composio
setup would add an unnecessary step. The board now calls the saved
gateway directly for that setup.

**Roadmap alignment**

This extends the shipped Connected Apps and MCP Tool Gateway features in
ROADMAP.md. The duplicate search found no open PR for managed account
discovery.

Related work: Refs #13755, Refs #13941, Refs #14725, Refs #13855. Open
PR #12906 covers adjacent toolkit routing work.

## What Changed

- Add provider-neutral discovery, sync, and refresh APIs. Preserve the
Composio API paths.
- Cache observations by company, saved gateway, viewing user, and
credential version. Retain stale observations after failed or incomplete
scans.
- Add optional Arcade account sync credentials in the vault. Discover
Executor accounts through its supported inventory interface.
- Group native and upstream accounts in one app card. Imported account
menus open their provider. Gateway menus own refresh and sync setup.
- Add Paperclip, Composio, Arcade, Installed, and All chips. Show 50
catalog entries per page. Keep connected accounts above discovery. Keep
explicit provider searches scoped.
- Simplify Composio app setup and refresh its connected app list on the
gateway Permissions page.
- Add a compact agent access card and task creation defaults for
connection setup. Preserve explicit blocks and approval policies.
- Add two replay-safe migrations, service and UI tests, Storybook
journeys, and acceptance stories.

## Verification

- Passed the repository typecheck, full build, token gates, and
migration ordering check.
- Passed the focused provider adapter, connection interaction, and
catalog tests after rebasing onto master.
- Passed all nine database sync and migration replay tests using a
disposable database on the test-drive PostgreSQL cluster. Removed that
database after the run.
- Verified Arcade cursor pagination against its official Go SDK and
passed all eight adapter tests, including short and incomplete pages.
- Passed all 45 interaction tests after making the exact requested tools
and their Allowed/Ask first permissions visible before granting access.
Verified the compact card in Storybook.
- Passed the complete UI suite on the final code: 683 files and 7,432
tests, including the corrected Composio destination assertions. Passed
130 focused tests for the UUID, management-link, and health-status
corrections.
- Passed 22 Composio setup/sync tests, 23 connection-intent service
tests, and the connection migration test in separate disposable
databases. Database startup alone was substituted; the suites exercised
their real SQL and services.
- Passed all 10 OpenAPI route checks and the full-stack
connection-intent browser test, including scoped consent, agent
continuation, and task completion.
- The local full runner encountered embedded PostgreSQL startup failures
on this loaded macOS host. The earlier in-flight run also held the
pre-fix Arcade transform; a fresh run of the final provider suite
passes. The final-head CI is queued during GitHub’s active Actions
incident: https://www.githubstatus.com/. The previous run also lost
several runners simultaneously; its real catalog assertion failures are
fixed and the fresh complete UI suite passes.
- Tested the real test-drive server in the embedded browser with a live
Composio gateway. Detected Airtable and Circleback. Verified refresh
progress, account rows, source chips, search scope, and 50-entry
pagination.
- Arcade and Executor coverage uses provider fixtures. Live credentials
were unavailable.
- Storybook builds successfully and includes grouped native/provider
accounts, stale and unavailable discovery, optional Arcade setup, and
mobile states. The acceptance document records the simulated and live
coverage separately.

- Greptile reviewed final commit
`217b024c27b5933e773ce9419c4e92b1032042c6` at 5/5. All six review
threads are resolved, security scans pass, and the PR has no merge
conflicts. The outstanding remote checks are `ci / Select trusted
runner` and `review`, queued by GitHub. They need to complete before
merge.

## Risks

- Provider response changes can break inventory discovery. Failed scans
retain observations and show stale status.
- Composio scans only the supported catalog and can take time. Large
inventories run in the background with progress and a bounded lease.
- Arcade requires a project API key and user ID when the gateway cannot
supply them. This key is used only for discovery.
- Executor discovery depends on the server's exposed inventory tools.
Unsupported servers report unavailable discovery.
- Cached account rows do not grant access or create executable
connections. Gateway policies still govern tool use. Account deletion
and per-app authorization remain upstream.
- The migrations add tables and one nullable column. Replay preserves
existing rows and company-scoped foreign keys.

## Model Used

OpenAI Codex, based on GPT-6. The session does not expose a more
specific serving model ID or context limit. Used reasoning, repository
tools, code execution, and browser verification.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [ ] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-05 14:57:04 -05:00
cab4263dc9 feat(claude-local): add Sonnet 5.5 and refresh the qualified Claude runtime (#14993)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The Claude local adapter lists models for users with a Claude
subscription.
> - The list needs Claude Sonnet 5.5 and its supported effort levels.
> - Sonnet 5.5 needs Claude Code 2.1.284 or later on both execution
paths.
> - The qualified ACP runtime previously used Claude Code 2.1.280.
> - This change adds Sonnet 5.5 and pins Agent SDK 0.3.286, which
includes Claude Code 2.1.286.
> - Users can select the model and run it with a qualified runtime.

## Linked Issues or Issue Description

Refs #3936. This replaces #14816 because the maintainer integration
cannot write to the contributor fork.

Thank you to @SkilLab-Tech for the model support, runtime refresh,
tests, and platform digest verification. This branch preserves both
original commits: `8d2f3261af61a2ac1120e51e8a8618732ace543b` and
`e68d1d002a3ed745f016fb11c50ac5a3c5a9ff8d`.

Related work:

- #14917 added Claude model ordering. This branch includes that merged
change and resolves its conflicts with #14816.
- #14942 updates the other models and harnesses. It remains separate.
Its matching Sonnet effort and CLI-gate changes are identical. Both PRs
merge with master. The second PR will need a rebase after the first
merges because adjacent runtime-pin and test edits conflict.
- #14954 is another Sonnet 5.5 change. It overlaps with the model
additions but does not include the qualified runtime refresh.
- #14039 makes the per-task effort picker model-aware. #3937 is also
related to effort selection.

The original author checked the [Claude Code
changelog](https://github.com/anthropics/claude-code/blob/main/CHANGELOG.md)
and [effort
documentation](https://platform.claude.com/docs/en/build-with-claude/effort)
on 2026-10-01.

## What Changed

- Add the direct `claude-sonnet-5-5` model and Low, Medium, High,
X-High, and Max effort levels.
- Require Claude Code 2.1.284 or later for that model on the CLI path.
- Put Sonnet 5.5 after Opus 5.5 in the current-model group. Keep Sonnet
5 in the older-model group.
- Retain the Sonnet 5.5 assertions and the model-order assertions in the
server tests.
- Pin Agent SDK 0.3.286 and Claude Code 2.1.286 across overrides,
integrity digests, qualified profiles, Rust provider pins, and the
Daytona version check.
- Update the related adapter and runtime documentation.

## Verification

Local verification uses the resolved source tree and pnpm 9.15.4. Model
tests passed on Node 25.9.0. Runtime integrity tests use CI's Node
24.21.0.

- Five focused Claude test files pass: 62 tests. They cover model
defaults, model ordering, CLI gates, and remote execution probes.
- Server model-list and UI setup tests pass: 30 tests.
- The Claude adapter typecheck passes.
- Runner integrity and qualification tests pass on Node 24.21.0: 78
tests. Four descriptor-loader tests fail on Node 25.9.0; all four pass
on the CI version.
- The runner package contract passes: 10 tests.
- Full local typecheck stopped with exit 137 in the database package
under the container's 4 GB memory limit. The production build reached
the runner Rust build, then stopped because `cargo` is absent.
- The full stable local Vitest run was stopped after all current-head CI
test shards passed. It did not complete locally. The 180 focused tests
listed above passed.
- `git diff --check` passes. The branch changes 20 files against master.
It has no lockfile or workflow changes.
- The original author verified all three platform digests against
registry integrity and ran the Linux executable. Its version was
`2.1.286 (Claude Code)`. See #14816 for that evidence.
- Greptile reviewed head `6db3d3f1` and gave 5/5 with zero comments.
Both Superagent scans and Commitperclip pass. All current-head CI jobs
pass, including build, typecheck, Rust, test shards, browser tests, and
the canary dry run.

## Risks

- The controller and provider pack must use matching runtime pins.
Deploy them together.
- CI owns `pnpm-lock.yaml`. The master lockfile refresh must resolve the
SDK override. Refresh the Daytona lock digest with that lockfile.
- Images built with Claude Code older than 2.1.284 need a rebuild before
the CLI path can use Sonnet 5.5.
- The runtime remains at SDK 0.3.286. This PR does not take the later
0.3.287 patch.
- A live Sonnet 5.5 session and a Daytona image build are not part of
the local verification.

## Model Used

- Original work: Anthropic Claude Code, `claude-sonnet-5-5`. Review:
`claude-opus-5-5`. The author reported `xhigh` effort, tool use, and
code execution. The original context window was not reported.
- Merge repair and PR preparation: OpenAI Codex, based on GPT-6, with
tool use and code execution. The runtime does not expose the exact model
identifier or context window in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

## Squash Attribution

Keep these trailers in the squash commit to preserve the original author
and AI attribution:

```text
Co-Authored-By: Claude Code (Ivan) <SkilLab-Tech@users.noreply.github.com>
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
Co-Authored-By: Paperclip <noreply@paperclip.ing>
```

---------

Co-authored-by: Claude Code (Ivan) <ivan@skillab.com.br>
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-05 11:03:20 -07:00
Devin FoleyandPaperclip 17fa718675 Retry transient disconnects in scoped read queries (#15248)
Apply existing bounded transient-disconnect retries to audited dashboard, heartbeat-list, and base issue reads. Rebuild each query per attempt and preserve authorization, company scope, enrichment, and final error propagation.

Validation: exact-head Greptile 5/5, passing CI, no unresolved review threads, and a clean merge. Detailed verification and limitations are recorded in the pull request.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-05 10:58:56 -07:00
Devin FoleyandPaperclip 3b47a6befd Record bounded workspace restore failure stages (#15005)
Capture allowlisted restore substep and failure metadata for future diagnosis while preserving workspace recovery behavior, error identity, cleanup ordering, and privacy.

Validation: exact-head Greptile 5/5, passing CI, no unresolved review threads, and a clean merge. Detailed verification and limitations are recorded in the pull request.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-05 10:58:32 -07:00
Devin FoleyandPaperclip 2e67ea8dc7 fix: renew explicit continuation authorization for bounded retries (#14987)
Preserve exact user-authorized continuation receipts across bounded retries and retain the task claim through owned retry admission. Stop, reassignment, superseding input, and active cleanup continue to block unsafe continuation.

Validation: exact-head Greptile 5/5, passing CI, no unresolved review threads, and a clean merge. Detailed verification and limitations are recorded in the pull request.

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-05 10:57:57 -07:00
DottaandPaperclip a65ca09508 fix(runner): settle accepted results after shutdown failures (#15217)
## Thinking Path

> - Paperclip manages AI agents and the tasks they perform.
> - The native runner saves tool results and completion reports before
it releases a session.
> - Large project discovery responses can exceed the durable command
limit.
> - A shutdown failure can leave a saved answer waiting for workspace
repair.
> - Recovery reused the old assessment for a different status decision,
which violated a database constraint.
> - This pull request bounds discovery responses and lets recovery
commit the saved result after workspace repair.
> - The benefit is a task that reaches its correct final status without
another provider turn.

## Linked Issues or Issue Description

**What happened?**

A native run can save its final answer, fail during shutdown, and leave
the task In Progress after workspace repair succeeds. Reconciliation
tries to reuse the failed-workspace assessment for a new decision. The
one-decision-per-assessment constraint rejects the write. Replaying the
old decision can also retain a fresh coordinator lease. Separately,
retained session cleanup only recognizes the old `adapter_failed` label.

The project-list tool returns full project records, including large
descriptions and workspace configuration. A large response exceeds the
runner's durable command limit. The settlement diagnostic previously
recorded only a failure flag.

**Expected behavior**

Project discovery stays within the command limit. Recovery finishes the
saved result after workspace repair, releases its lease, and preserves
the original error for inspection. It does not repeat provider work or
relax session ownership checks.

**Steps to reproduce**

1. Return large project records from `list_projects` and observe an
oversized semantic result.
2. Persist an accepted native completion result, then record a shutdown
failure.
3. Finalize with a failed workspace, repeat that attempt, then record
successful workspace repair.
4. Reconcile the run. Before this fix, the issue stays In Progress.

**Paperclip version or commit**

Reproduced on `a386a599983519eb1d399f8b770bfccdb2a74762`.

**Deployment mode**

Self-hosted server with Paperclip Runner.

Related transport work: #12208 drains queued events; #12241 resumes
interrupted semantic calls. This change addresses bounded project
discovery and accepted-result finalization.

## What Changed

- Read bounded project summary projections from the database and return
at most 50 authorized summaries with a continuation cursor and explicit
description truncation. Agent and run trust boundaries narrow the
database candidates; project-specific policies still receive full
authorization. Only visible projects determine continuations. The
default project-list API remains unchanged.
- Record bounded, content-free settlement failure causes for command
limits, storage errors, and rejected dispatch.
- Include workspace state in assessment identity. Preserve the initial
assessment for interrupted finalization, and commit replacement
assessment and decision references together.
- Release the coordinator lease when an existing decision is replayed,
without repeating its effects.
- Clear stale errors when recovery succeeds and retain them in
`recoveredExecutionFailure`.
- Accept both current and legacy close-failure labels in the existing
exact-state cleanup path.
- Add regression tests and update the tool contracts and recovery
documentation.

## Verification

- Red: the new project paging, settlement diagnostic, current cleanup
label, and repaired-workspace regressions failed on the original
implementation.
- Green: protocol/catalog/tool checks (117 tests), the full project-tool
and finalizer suites (47 tests), cleanup ownership cases (70 tests), and
cleanup sweep cases (4 tests) pass. Database-backed pagination covers
large descriptions/configuration, complete enumeration, uppercase
cursors, agent/run restrictions, project-policy scope contributions, and
identical results/cursors when hidden projects are added.
- The initial CI failures in interrupted Board waits, contended endpoint
proof, and semantic schema validation were reproduced and fixed; all
affected cases pass locally.
- `pnpm -r typecheck` — passed.
- `pnpm build` — passed.
- `pnpm test:run` — started before the review corrections; it spanned
several source revisions and was stopped after reporting old-behavior
and timing failures. It is not claimed green. Fresh project and recovery
suites pass; the recovery suite also passes all 25 cases with the broad
runner’s isolated home/config. The Slack timing case passed in
isolation. Latest-head CI is the authoritative complete test matrix.
- Existing authorization suite — 66 tests passed.
- Latest-head CI on `8e5763d915aa6f375bdab6601996899ea01496fc` — 55
checks passed, 4 intentionally skipped, no pending or failing checks.
- Greptile — 5/5, zero unresolved threads on the same commit.
- `git diff --check` — passed.

## Risks

- `list_projects` now returns summaries. Callers must follow
`nextCursor` and use the authorized project API for full records.
Candidate narrowing is only an optimization: project policy and
responsible-user authorization remain authoritative.
- Assessment identity changes for workspace finalization. Existing
evidence remains intact; no migration is needed.
- Cleanup still requires matching identities, settled tool evidence, and
verified process ownership. Unknown tool outcomes remain blocked from
session reuse.

## Model Used

OpenAI Codex, based on GPT-6, with reasoning, code execution, and GitHub
tools. The exact serving model ID and context window are not exposed in
this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-05 10:31:11 -05:00
1c07b5903b feat: Chat leads the left nav, agent work beside chats, and a Combined Inbox + Task List flag (#15100)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - The left nav is the main way people move between tasks, the inbox,
and Agent Chat
> - The nav has separate Inbox and Tasks rows that show overlapping
work, and Chat is one row among many
> - The side panel beside a chat shows the conversation's own artifacts,
not the work the agent did
> - People want Chat to be easy to find, and they want one place for
their task views
> - This pull request moves Chat to the top of Work, shows the agent's
tasks and artifacts beside each chat, and adds an experimental flag that
folds Inbox into Tasks
> - The benefit is a shorter nav and a chat view that shows what the
agent is working on. Both changes stay off until an operator enables
them

## Linked Issues or Issue Description

Refs #14706 (the secondary Agent Chat navigation this change builds on)
Refs #14848 (reopen the last visited agent chat)

**Subsystem affected**
UI navigation (left nav, mobile tab bar), Agent Chat side panel, task
list and inbox, and the company artifacts API.

**Problem or motivation**
Inbox and Tasks are two nav rows for overlapping work. Chat sits in the
top group with no clear home. The chat rail lists only agents you
already talked to, so you cannot see your other teammates there. The
side panel beside a chat shows only the conversation's own artifacts. It
does not show the tasks and files the agent made.

**Proposed solution**
With Agent Chat on, Chat leads the Work section and the rail lists every
eligible agent. The chat side panel opens on the agent's tasks as cards,
and the agent's artifacts are available from +. A new experimental flag,
Combined Inbox + Task List, makes Inbox a set of views inside Tasks.

**Alternatives considered**
Rebuilding the inbox inside the task list. Instead, `/issues` hosts the
existing Inbox component for inbox views and the existing task list for
status views, so all inbox behaviour stays the same.

**Roadmap alignment**
Agent Chat (ROADMAP.md, "Agent Chat (including CEO Chat)"). All changes
are behind experimental flags that are off by default.

## What Changed

- **Agent Chat nav (streamlined shell):** Chat is the first row of Work,
not a top-group row. Workspaces leaves the nav while Agent Chat is on.
The mobile tab bar is Home · Chat · + · Tasks · Agents. The legacy shell
keeps master's top-group Chat row.
- **Chat rail:** `AgentConversationsSidebar` lists every eligible agent.
The open chat is first, then conversations by recent activity, then the
rest of the roster alphabetically. Terminated agents and agents you left
are omitted unless you have history with them. The picker still marks
only real conversations as "Open chat".
- **Chat side panel:** a new default Tasks tab shows one card per task
the agent created, was assigned, commented on, or acted on, newest
first. It has the task list's filter popover and a sort control. **+ →
Artifacts** shows the agent's artifacts as cards. Cards open in a new
tab. Agent Chat off keeps the old Artifacts tab.
- **Artifacts API:** `GET /api/companies/:companyId/artifacts` accepts
`agentId`. The filter applies to documents, work products, and
attachments by the agent each result is attributed to. The shared
validator and the UI client carry the new parameter, and the OpenAPI
entry picks it up from the shared schema.
- **Combined Inbox + Task List flag (`enableCombinedInboxTasks`, off by
default):** new card in Settings > Experimental. The Inbox row goes away
and its badge moves to Tasks. A Views menu on `/issues` covers Mine,
Unread, Blocked, Recent, Everything, All, Active, Backlog, and Done.
Bare `/issues` opens the last-used view (default Mine). Links that carry
`assignee`, `workspace`, `participantAgentId`, or `q` open All so the
filter is kept. `/inbox/*` and
`/issues/{all,active,backlog,done,recent}` redirect to the matching
view. `/inbox/requests` stays its own page.
- **Task detail breadcrumb:** the view key now decides the source, so
quick-archive still works after a reload from an inbox view.
- **Docs:** `doc/PRODUCT.md` and `doc/SPEC.md` describe the chat rail,
the chat side panel, and the new flag.

## Verification

- `cd ui && npx vitest run --no-file-parallelism src/components/chat
src/components/task-side-panel/TaskSidePanel.test.tsx
src/components/AgentConversationsSidebar.test.tsx
src/components/Sidebar.test.tsx
src/components/SidebarCompanyMenu.test.tsx
src/components/Layout.test.tsx src/pages/AgentChats.test.tsx
src/pages/InstanceExperimentalSettings.test.tsx
src/lib/task-views.test.ts src/lib/issueDetailBreadcrumb.test.ts
src/pages/Inbox.test.tsx src/pages/Issues.test.tsx src/App.test.tsx
src/App.activity-routing.test.tsx
src/components/MobileBottomNav.test.tsx
src/components/CommandPalette.test.tsx`: 20 files, 356 tests pass.
- `cd server && npx vitest run
src/__tests__/company-artifacts-service.test.ts`: 13/13 pass, including
the new agent-filter test across all three artifact sources.
- The new rail test fails against the unmodified rail.
- `pnpm check:token-gates`: all gates clean.
- Manual: enable Agent Chat in Settings > Experimental. Open Chat. The
rail lists all agents. Open a chat. The side panel shows the agent's
tasks. Use **+ → Artifacts** to see the agent's artifacts. Then enable
Combined Inbox + Task List. The Inbox row goes away, and Tasks shows a
Views menu.
- Snapshot baselines are intentionally not updated. See
`doc/design/DECISION-SHEET.md`, "Per-change snapshot verification
demoted to dormant (Jul 13 2026)".

## Risks

- With both flags off, the app behaves like master. The only exception
is the API: it accepts a new optional query parameter.
- With Agent Chat on, the rail can list many agents in a large company.
It uses the agent list the app already loads, and search filters it.
- The Tasks panel reads at most 200 recently updated tasks per agent and
says so when it reaches the limit. The Artifacts panel reads at most 500
of the agent's artifacts.
- Combined Inbox + Task List changes what bare `/issues` opens for
people who enable it. Deep links with a task filter still open All.

## Model Used

- Claude (Anthropic), model ID `claude-opus-5-5`, through Claude Code
with tool use (shell, file edit, test runs). Extended thinking was
enabled.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: scotttong <squadbot000@gmail.com>
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-10-04 02:13:46 -07:00
DottaandPaperclip 994d6edcdd Fix Markdown in provisional task titles (#15047)
## Thinking Path

> - Paperclip uses issues to organize work for AI agents.
> - Paperclip creates a provisional issue title from the issue
description.
> - A description can start with a Markdown image or other Markdown
syntax.
> - The old title logic truncated the raw Markdown source.
> - This pull request parses Markdown before it truncates the title.
> - The benefit is a short and readable provisional title.

## Linked Issues or Issue Description

**What happened?**

When an issue description started with a Markdown image, Paperclip used
the raw image syntax and URL in the provisional title. Other common
Markdown markers could also appear in the title.

**Expected behavior**

Paperclip must remove Markdown syntax before it creates the
120-character provisional title. It must keep useful text, such as link
labels and inline code content.

**Steps to reproduce**

1. Create an issue without an explicit title.
2. Start the issue description with a Markdown image.
3. Add Markdown text after the image.
4. Observe that the provisional title contains raw Markdown syntax or an
image URL.

**Paperclip version or commit**

The problem reproduces on `master` before this change.

**Deployment mode**

Local development with the embedded PGlite database.

## What Changed

- Parse the description and remove image nodes before title generation.
- Convert the remaining Markdown to plain text before the 120-character
limit.
- Keep link labels, inline code, and identifier punctuation.
- Use image alt text, or `Image`, for an image-only description.
- Fall back to a simple 120-character title if Markdown parsing or
conversion fails.
- Add regression tests for image and inline-code titles, parser
failures, and text-conversion failures.

## Verification

- `./node_modules/.bin/vitest run
server/src/__tests__/task-title-routes.test.ts`
- `./node_modules/.bin/tsc -p server/tsconfig.json --noEmit`
- Full GitHub CI matrix passed on commit
`663f3a0517c9e450f174b6c37970756457067ba5`.
- Greptile reviewed the latest commit with a 5/5 confidence score and no
unresolved findings.

## Risks

- Low risk. This change only affects generated provisional titles. It
does not change explicit titles or full issue descriptions.
- The implementation uses the Markdown parser and plain-text converter
that are already present in the server.

> This is a focused bug fix. It does not add planned core work from
`ROADMAP.md`.

## Model Used

- OpenAI Codex with GPT-5. The run used reasoning, tool use, code
execution, and repository access. The runtime did not expose the context
window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-03 21:19:55 -05:00
DottaandPaperclip b17019e14d fix(agents): reduce default instructions and qualify stock harnesses (#14948)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Its adapters supply task context and access to Paperclip skills and
tools.
> - The default hire manual and shared prompts also repeat general work
procedures.
> - Those procedures overlap with stock provider instructions and the
Paperclip skill.
> - Existing E2E fixtures supply a QA manual, so they do not qualify the
production default.
> - This pull request reduces the generic instructions and adds real
default-hire coverage.
> - The benefit is less competing guidance, with inspectable evidence
for preserved skills and task context.

## Linked Issues or Issue Description

Refs: #14920. That merged change preserves native Codex base
instructions. This PR covers the default manual, shared legacy prompts,
operational skill guidance, and the narrowly approved ACP
skill-discovery/session-environment repair for measured delivery and
credential-persistence failures.

**What existing behavior does this improve?**

New non-CEO hires without a custom bundle and legacy task/chat startup
and continuation prompts.

**Current behavior**

The shipped default manual contains 602 words. Generic task/chat prompts
and ordinary resume deltas repeat work procedures already available
through the harness and Paperclip skill.

**Proposed behavior**

The default manual contains only the eight-word company identity. Shared
startup prompts retain identity and connection guidance. Ordinary resume
deltas retain current work context without the generic execution
contract.

**Reason and benefit**

Let the stock harness guide general work. Keep Paperclip-specific
capabilities and independently test default hires, skills, ordered
comments, and chat restart.

**Breaking changes**

New default hires receive less guidance. Existing saved manuals,
explicit custom bundles, CEO templates, and specialized wake contracts
retain their behavior. The obsolete includeExecutionContract option
remains accepted for source compatibility.

## What Changed

- Reduce the default hire manual to one sentence.
- Reduce shared task/chat defaults and remove the generic
ordinary-resume contract.
- Keep connection guidance, auth, skills, custom prompts, and
specialized wake context.
- Add credential-free instruction-boundary gates and 26 explicit Product
E2E cells across eight legacy/native profiles, including two focused
Paperclip-storage cases.
- Capture public hire receipts before providers run, then grade
delivered prompts and independent task/chat outcomes.
- Add an early legacy skill API recipe for saving a task document,
checking the saved revision receipt and linking the document. Improve
stock task/heartbeat skill-selection metadata and show a clickable
Markdown UI-link example. Keep native tool completion separate.
- Advertise bounded routing descriptions and exact successfully staged
SKILL.md paths in legacy ACP Claude; keep full bodies on demand and
preserve remote path rebasing.
- Remove only the provider environment from copied persisted ACP session
records, while loading current run credentials and preserving all other
options/conversation state.
- Regenerate both capability metadata inventories and reject stale
manifests/inventories before provider admission.
- Publish the original reduction and focused skill-repair comparisons,
preserving all failures, automatic recovery, cost coverage and
limitations.

## Verification

**Behavioral qualification remains pending.** Original legacy ACP Claude
loses the issue document only in the reduced cohort beneath an unchanged
credential failure. A source-backed diagnosis finds that neither
ordinary assignment reads the staged operational skill, while the
runtime persists provider environment in session state. The new common
repairs expose skill metadata/path and omit persisted env; strict
document and credential guards stay intact. [Inspectable diagnosis and
retained
hashes](https://github.com/paperclipai/paperclip/blob/9f654db4541d3d002769c988f6e51fc0b08dadbd/doc/plans/2026-10-03-legacy-acp-claude-readiness.md).

Current repair head `de0965984ff3edf611ae6d0e7ca5c7d5ae3947bb`
incorporates master `569c7203aa24b95440682983ce7940ba1d4247bd` (merged
#14961/#15007). All 222 affected adapter tests, adapter-utils/E2E
typechecks, and final 96 variant/grader/retry calibrations pass. The
frozen historical comparator is
`c25697f4260b6f3adfea143c3ae9932e2f42986d`: 8,280 of 8,291 paths
identical, exactly two production instruction paths plus nine declared
unit expectations differ. The operational skill/discovery/environment
repairs, selected model/profile/task/core grader/auth/permissions/retry
policy are identical. Both actual launcher prepare→verify admissions
pass with zero providers. [Immutable manifest and exact
receipts](https://github.com/paperclipai/paperclip/blob/9f654db4541d3d002769c988f6e51fc0b08dadbd/doc/plans/2026-10-03-legacy-acp-claude-evidence/manifest.json).

One original legacy ACP Claude cell per variant is authorized, with
enforced single campaign attempts, 12-minute deadlines and company/agent
1,000-cent hard stops; every product recovery run/cost is counted.
Actual live outcomes are pending. Current normal CI has one failed
server shard and failed aggregate verify under diagnosis; other normal
gates including typecheck/build/Rust/all eight browser shards pass.
Fresh review completed successfully; the valid historical startup/resume
masking finding was fixed with per-invocation task/chat checks and
strict complete-snapshot capture, calibrated and resolved. Prior heads,
failures and campaigns below remain historical evidence, not checks on
this repair head.

- Prior head `36aa4d81c49a1a8f6f04b1a068fae19aa901955f` is replayed on
merged hiring master `862a5758ba0e88a33232c1f1fa645e85c38a3113`. All 52
current-head checks pass with two intentional Storybook skips, including
repository typecheck/test/build and the browser shard. Fresh Greptile is
5/5 with zero unresolved review threads. Exact-head stock prerequisites
pass 599 assertions (598 TypeScript + 1 Rust), all six gates and
retained receipt verification, zero providers/source errors. Fingerprint
`a7f5a22d860a88fe20cce213c6d5e0004788f32c8363930729aea4fd740ad16d`.
Combined catalog/hiring calibrations pass 67 assertions, E2E typecheck
and 26-cell stock discovery pass. Canonical contract/inventory checks
and the later issue-derived reference calibration are retained; that
reference-only follow-up is not live-qualified by earlier frozen runs.
- Prior full repository typecheck/build passed. The complete local
Vitest run executed 14,956 tests: 14,870 passed, 83 skipped, three
timing failures. All three affected files passed unchanged narrow
reruns; original failures remain retained. Current-head CI now passes
the full general checks; the original local failures remain retained.
- The original 24-pair default-manual/shared-prompt comparison has two
new overall classic Claude/OpenCode document-delivery failures plus an
additional legacy ACP Claude document loss beneath an unchanged
credential-guard failure (not closed by later runs), two newly passing
OpenCode ordered cases, seven unchanged failures and 13 unchanged
passes. Equal 15/24 totals do not establish behavioral equivalence.
[Complete original
report](https://github.com/paperclipai/paperclip/blob/875f4c397d9e8c3f12f39dedd59abaf1eaf5236e/doc/plans/2026-10-02-stock-harness-live-comparison.md).
- The skill-only repair holds the eight-word manual/shared prompts and
merged #14920 fixed. All four matched profile configurations and 203
fixture/behavior files match. Candidate
`abd0b628ca642c09a54a4edc56a5227402f6686e` varies only the two skill
sources against baseline `bc83fe030234439ac51279502a28803958963e2e`.
[Candidate
workflow](https://github.com/paperclipai/paperclip/actions/runs/37060885547)
and [baseline
workflow](https://github.com/paperclipai/paperclip/actions/runs/37060888047)
each pass 571 exact-source prerequisites before providers; all eight
cells clean up successfully. Failed campaigns publish successfully and
remain failed.
- Repair pairs: Claude original Fail → Pass; Claude explicit Pass →
Pass; both OpenCode cases Fail → Fail. Explicit OpenCode's handoff
worsens beneath the unchanged failing UI-link grade: baseline gives a
clickable API URL, candidate gives a code-formatted path without an
anchor. The request's usable-link wording is narrower in the UI-only
oracle. [Complete repair report and safe
projection](https://github.com/paperclipai/paperclip/blob/875f4c397d9e8c3f12f39dedd59abaf1eaf5236e/doc/plans/2026-10-02-legacy-document-skill-repair.md).
- The subsequent narrow stock metadata/link correction has two matched
Pass → Pass cases, zero new machine failures/passes and no pending
pairs. Both original-case handoff links remain deficient: candidate uses
a wrong PAP prefix, baseline supplies a bare prefix-less slug path; the
preserved original oracle only requires a durable document. Both
explicit clickable UI-link cases pass revision/content/link grading. All
four exact-source 587-check gates, single assignment runs and cleanup
pass. This does not establish fix causality because baseline also
succeeds. [Candidate
workflow](https://github.com/paperclipai/paperclip/actions/runs/37069547401)
freezes `fe9dc1e3c518825242ed889ab9c8352986f8c2ed`; [matched
baseline](https://github.com/paperclipai/paperclip/actions/runs/37069552374)
freezes `0d7ecfa96d72fba79b7f0a25052b42c0686c0488`. This is a skill-only
comparison with reduced manuals/shared prompts held constant, not a
repeat of the historical-manual comparison. Only original and clarified
explicit classic OpenCode cases are selected, two per variant/four
expected turns. 8,242 other tracked files and both profile hashes match;
protected workflows admit each exact source before credentials.
[Complete qualification
report](https://github.com/paperclipai/paperclip/blob/74d0d3d945f4c52d0814b5a845ab5bd09f33cd6b/doc/plans/2026-10-02-opencode-skill-routing-link-qualification.md).
Candidate original loads Paperclip/reference before saving publicly;
baseline original loads it after writing locally, then saves publicly
within the same assignment. Reported cost totals are $0.0107824490
candidate / $0.0107909015 baseline, with unmetered runtime. The later
reference-only issue-derived link correction is provider-free calibrated
and **not live-qualified** by these frozen runs; no further paid runs.
- Retained tool calls show the repaired original OpenCode assignment
loads only its assigned output skill before writing locally. Operational
Paperclip is first loaded during automatic disposition recovery; its
early recipe is visible then, but it never saves the missing document.
Explicit candidate loads Paperclip and reads the new reference before
saving successfully. All nine actual runs are counted. Reported LLM
totals are $0.3802537209 baseline and $0.4918990161 candidate; local
runtime is unmetered.
- Initial setup, packaging, cancelled/missing-cell recovery, callback
test and relative-output attempts remain retained. No completed provider
failure was rerun. Frozen measurement branches are unchanged by later
canonical metadata maintenance.
- Run `pnpm test:e2e:runner:stock-harness`, `pnpm test:e2e:runner:unit`,
and `pnpm test:e2e:runner:typecheck`. Select `stock-harness` explicitly
for paid execution; it is excluded from `--all`.

Prior-head integration: `36aa4d81c49a1a8f6f04b1a068fae19aa901955f`
replays this PR on merged hiring #14985
(`862a5758ba0e88a33232c1f1fa645e85c38a3113`), preserving the four
explicit custom-CEO-bundle checks, minimal generic manual boundary, and
both suites. The combined fixture catalog and hiring calibrations pass
67 assertions; exact-head stock prerequisites pass 599 assertions (598
TypeScript + 1 Rust), all six gates and retained-receipt verification,
zero providers/source errors, fingerprint
`a7f5a22d860a88fe20cce213c6d5e0004788f32c8363930729aea4fd740ad16d`. E2E
typecheck and 26-cell stock discovery pass. Fresh current-head CI passes
all 52 checks with two intentional skips, and fresh Greptile is 5/5 with
zero unresolved review threads.

The prior source-plan browser failure is retained: a deterministic
process fixture replayed its last `fixture:plan` command on
`chat_task_completed`, writing revision 2 with identical body after the
approval handoff. This was not paid provider execution. Rebased
current-head CI passes the same assertion without an old-head retry or a
change to that browser fixture.

The merged hiring change was measured separately on immutable matched
unions, with this reduced/shared/operational context and native
completion guidance held constant. [Complete original two-profile
report](https://github.com/paperclipai/paperclip/blob/f0512647656be78e48abd8c22a3078db8bf6bcd2/doc/plans/2026-10-02-hiring-template-live-comparison.md):
[candidate](https://github.com/paperclipai/paperclip/actions/runs/37075466208)
/ [historical
baseline](https://github.com/paperclipai/paperclip/actions/runs/37075469463),
705 provider-free prerequisites each. Both pairs are unchanged Fail →
Fail on the exact-five count, with six core delivery checks passing all
four cells; 28 actual successful runs include eight automatic completion
wakes, zero retries, four successful cleanups. Source-read coverage is
uncomparable, actual model charges unknown. Separately versioned
provider-free accounting remains analytical work; original verdicts are
preserved. This does not rerun or qualify the completed default-manual
or native campaigns.

## Risks

- Legacy ACP Claude's additional delivery loss is not closed by any
later matched run and blocks the no-extra-failing-behavior merge
criterion. Legacy document delivery may have relied on the prior
manual/shared prompts. The early skill repair improves Claude in one
trial; the later OpenCode pairs pass in both variants and cannot
establish causality or robust recovery. Both original-case links remain
deficient beneath the storage-only grade. The later issue-derived
reference correction has only provider-free validation. Native
finish/block descriptions must not be supplied to legacy agents.
- The comparison holds merged native Codex fix #14920 constant; it
cannot measure that fix's before/after task performance.
- These bounded skill/context/chat workflows do not measure general
coding quality. Unrepresented providers remain unqualified.
- Saved manuals and old Codex sessions are not automatically migrated.
Codex through ACP still has a separate base-instruction follow-up.

## Model Used

OpenAI Codex, GPT-6 family as identified by this session. The exact
deployment ID and context-window size are not exposed. The assistant
used reasoning, repository tools, code execution, and delegated PR/eval
work.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` /
`Closes: #` / `Refs: #` OR (b) described the issue in-PR following the
relevant issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass (relevant suites and all
three unchanged narrow reruns pass; complete-run timing failures
retained in Verification)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green on the new repair head
(prior-head checks retained above)
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
on the new repair head
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-03 12:32:42 -05:00
DottaandPaperclip ffe5e9e2a8 fix: retain execution evidence for Retry and saved input (#15033)
## Thinking Path

> - Paperclip lets people steer and recover AI-agent conversations.
> - Recovery eligibility depends on retained cancellation receipts.
> - Run presentation intentionally omits result JSON on SQL_ASCII
databases and reduces oversized output.
> - Retry and the saved-input sweep mistakenly used that presentation
read for admission.
> - The banner could offer Retry while the endpoint rejected the same
stopped run.
> - Read the narrow execution-evidence fields for internal admission and
keep normal presentation unchanged.

## Linked Issues or Issue Description

Refs #15024 and #15015. Searched existing recovery and redaction PRs; no
duplicate fix found.

**What happened?**

On a SQL_ASCII instance, a verified pre-dispatch review-wait
cancellation offers Retry in the recovery notice. Clicking it returns an
eligibility conflict, and a saved user message remains deferred. The
notice reads the retained database receipt, but the endpoint and sweep
read a presentation projection where `resultJson` is null.

**Expected behavior**

Retry and saved user input use the recorded execution evidence and
ordinary admission gates, independent of presentation redaction. Public
run reads retain their existing encoding and output-size protections.

**Steps to reproduce**

1. Record a cancelled, unclaimed review-wait continuation and its
recovery hold.
2. Use the SQL_ASCII presentation projection, where run result JSON is
omitted.
3. Click Retry or save a new user message and let the recovery sweep
inspect it.
4. Verify a fresh turn starts once, with no replay of consumed input.

**Paperclip version or commit**

Reproduced on `9ae3d8db3`.

**Deployment mode**

Authenticated private self-hosted server with a SQL_ASCII database.

## What Changed

- Add an explicit internal read of cancellation, startup, review-wait,
tool-inventory, and Stop evidence; omit provider diagnostics.
- Use that read in the Retry route, wakeup validation, and saved-input
continuation checks.
- Preserve the distinction between absent result JSON and an
unrecognized stored result.
- Cover the reproduced SQL_ASCII Retry and saved-input failures,
retained public redaction, native Stop behavior, and excluded provider
output.
- Document the presentation and admission distinction.

## Verification

- Red: four selected assertions fail before the fix, including the
SQL_ASCII eligibility conflict and saved input remaining deferred.
- Targeted green regressions and existing native Stop cases pass.
- Workspace `pnpm -r typecheck` and `pnpm build` pass.
- All 626 affected recovery, continuation, and route tests pass,
including 22 focused admission and native Stop cases. Current-head CI
has 54 passing gates and 2 skipped optional Storybook checks. Greptile
reviewed `9b94af91e295a4e8007dfc6bff6a8d532d945e36` at 5/5 with no
findings or open review threads. No complete local monolithic pass is
claimed; the complete suite runs in sharded CI.

## Risks

Admission still checks recorded process and controller ownership,
provider events, cleanup, company scope, user authority, pending
decisions, and task holds. The evidence projection must retain every
field used by these eligibility predicates; existing native Stop cases
guard against dropping its acknowledgement receipt. No schema,
dependency, UI, or public response change.

## Model Used

OpenAI Codex, an agent based on GPT-6. The exact runtime model ID and
context window are not exposed in this session. Used reasoning,
repository tools, code execution, and browser inspection.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-03 01:38:57 -05:00
DottaandPaperclip 9ae3d8db3d fix: keep pre-dispatch review waits out of execution recovery (#15024)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The queued-run gate can cancel a continuation that must wait for
review.
> - This cancellation happens before execution authority or a provider
starts.
> - Recovery currently treats the gate receipt as unknown provider
execution.
> - That mistake blocks a conversation after a successful reply and
hides Retry.
> - This pull request recognizes only the recorded, unclaimed
review-wait state.
> - Review waits keep their normal disposition path, and new user input
can recover older false holds.

## Linked Issues or Issue Description

Refs #15015, #15020, and #15022. Related #11614 narrows the review
posture that causes cancellation; this change corrects recovery after a
valid cancellation.

**What happened?**

After a successful agent reply, the queued-run gate cancelled an
automatic continuation with `issue_continuation_waiting_on_review`. The
gate retained `timeoutSource: stale_queued_run_gate` and a matching stop
reason. No execution authority or provider started. Recovery still
created an unknown-action hold, moved the task to Blocked, and hid
Retry.

**Expected behavior**

Use normal review-wait disposition repair for this recorded state. Allow
Retry, a new user message, or saved undelivered input to recover an
older false hold after ordinary admission checks pass. Preserve the
cancelled run and do not replay its input.

**Steps to reproduce**

1. Finish an agent turn on an open task that has a real review target.
2. Let the automatic continuation reach the queued-run review gate.
3. Refresh after the cancelled run is checked by recovery.
4. Confirm a review wait is handled as a wait rather than unknown
provider work.
5. Reproduce an older false hold for the same receipt, then request
Retry or send a new message.
6. Confirm only one fresh turn starts, and contradictory execution or
cleanup evidence retains the hold.

**Paperclip version or commit**

Reproduced on `215586d127`.

**Deployment mode**

Authenticated private self-hosted server, built from source.

## What Changed

- Recognize the exact review-wait dispatch receipt only while all
execution claims remain unset.
- Exempt recovery only after checking retained launch and provider
events, coordinators, and environment cleanup. Keep the synchronous
classifier conservative without that database proof.
- Apply the verified classification to automatic recovery, heartbeat
retries, and stranded-queue release, so saved user input starts once.
- Reuse guarded startup admission for Retry, new input, and saved input
on older false holds.
- Show a precise review-wait notice and keep continuation guidance
consistent with Retry availability.
- Verify provider events, launch events, coordinators, and cleanup
before admission.
- Add five initial red regressions, three additional red recovery
evidence regressions, concurrent saved-input coverage, and negative
evidence checks.
- Document the review-wait contract.

## Verification

- Red: five regressions fail on unchanged master. Existing review-wait
and contradictory-evidence cases still pass.
- Workspace `pnpm -r typecheck` passes.
- All 752 affected recovery, continuation, queue, classification, and
retry-scheduling tests pass.
- Three additional review regressions failed before the database proof
was added; all 12 focused review-wait cases then pass.
- Workspace `pnpm build` passes.
- Saved-input promotion and recovery notice regressions fail before
their fixes and pass afterward.
- Current-head CI has 54 passing checks and 2 skipped optional Storybook
checks. Greptile reviewed `0bf1437110e1617ae4544afa41f4319eac763dba` at
5/5 with zero open findings. The complete suite runs in sharded CI. No
complete local monolithic pass is claimed; an earlier long run was
stopped, and its unrelated failing case passed in isolation.

## Risks

The error code alone cannot establish that no provider started. This
exception also requires the server gate receipt, matching stop reason,
and null execution authority fields. User admission separately checks
coordinator, launch and provider events, environment cleanup, pending
decisions, ownership, task holds, budget, and active execution. No
migration or dependency change.

## Model Used

OpenAI Codex, an agent based on GPT-6. The exact runtime model ID and
context window are not exposed in this session. Used reasoning,
repository tools, code execution, and browser inspection.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-03 01:00:42 -05:00
DottaandPaperclip cc67d4e1d8 fix: preserve steering and recover stopped task conversations (#15015)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - A task conversation must let a user guide a running agent and resume
stopped work.
> - The active run owns its input protocol, even when the user changes
the next model or effort.
> - Queue delivery waits for a provider receipt, which must be able to
persist during the request.
> - A stopped startup also needs a clear user action that passes normal
task admission.
> - This pull request fixes steering delivery, makes queue actions
immediate, and restores explicit continuation.
> - The benefit is a responsive conversation that can recover without
losing saved input.

## Linked Issues or Issue Description

**What happened?**

A queued message could change from Steer to Interrupt while a native run
prepared. A steer request could wait on its own database lock and fail
to deliver. A stopped startup could then leave the conversation without
a working Retry or message continuation. Interrupt also waited for the
server and showed a toast.

**Expected behavior**

The active run keeps its input protocol. Steer delivers input to that
run. Steer and Interrupt clear the submitted queue rows and show the
input in the conversation immediately. Failed delivery restores the
latest queue with an inline error. An eligible stopped run offers Retry,
and authenticated user input can start a fresh turn through normal task
admission.

**Steps to reproduce**

1. Start a task with a native Paperclip Runner.
2. Change the selected model or effort while that run prepares.
3. Queue a message and press Steer.
4. Observe the provider receipt and queue state during the request.
5. Stop a startup before its provider process begins, then try Retry or
send a new message.
6. Repeat queued delivery with a legacy runner and press Interrupt.

**Paperclip version or commit**

Reproduced on the parent of this branch, `59c07ede7`.

**Deployment mode**

Authenticated private deployment. The fixes also cover local task
conversations.

Related work: Refs #12834, Refs #13354, Refs #13275. The open refactor
in #13160 moves the same queue route; it does not fix the receipt lock
or stopped-run continuation addressed here.

## What Changed

- Select queue behavior from the active run's immutable dispatch and
runtime resolution.
- Leave the run row unlocked during provider acknowledgement, then lock
and read it before merging the receipt.
- Retain queued input if the target run stops during that wait. Keep
inline delivery errors visible after empty queue updates.
- Permit exact Retry and authenticated continuation after verified
native startup cancellation. Preserve pause, approval, budget,
ownership, and process-stop gates.
- Carry undelivered native queue input into a fresh turn once the old
execution is confirmed stopped.
- Show Steer and Interrupt input in the conversation and clear submitted
composer rows immediately. Restore the latest queue inline on failure.
Remove delivery toasts.
- Keep optimistic delivery stable across stale polls, empty queues, and
paginated history. Preserve classic Interrupt error handling.
- Document recovery and optimistic delivery behavior. Add regression
tests across server, shared queue projection, and UI boundaries.

## Verification

- Red-green regression tests reproduced the queue protocol, receipt
lock, stopped-startup continuation, and optimistic delivery failures.
- The focused server route, continuation, queue, and runner boundary
suites passed during implementation.
- The queue-route suite passes with 78 tests. The three complete
conversation UI suites pass with 347 tests.
- UI typecheck, production build, and `pnpm check:token-gates` pass.
- Workspace `pnpm -r typecheck` and `pnpm build` pass. The local
monolithic `pnpm test:run` is still running; remote CI verifies the
complete suite on the latest commit.
- All CI gates pass on `bd9031ad56abfcde13d13a13488c1b9217c2fd3a`,
including the full test shards, runner verification, browser E2E,
typecheck, release registry, and canary dry run.
- Greptile reports 5/5 for that commit. Both review threads are
resolved.

## Risks

This changes queue display and explicit continuation admission. The UI
must restore rejected delivery without losing other-session edits. The
server must preserve concurrent provider result updates and must not
resume a process whose stop is uncertain. Focused tests cover these
boundaries. This change has no database migration.

## Model Used

OpenAI Codex, an agent based on GPT-6. The exact runtime model ID and
context window are not exposed in this session. Used reasoning,
repository tools, code execution, and browser inspection.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 22:07:14 -05:00
Devin FoleyandPaperclip 1815474597 fix: report pending execution phase at Stop timeout (#14990)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The server owns each adapter execution and waits for it to settle
after Stop.
> - A Stop timeout reports that termination remains unverified.
> - Existing phase timings arrive only after their work completes, so a
stalled await has no timing.
> - This pull request samples the pending phase when the Stop timer
expires.
> - Operators can identify the pending operation without treating
diagnostics as stop proof.

## Linked Issues or Issue Description

**What existing behavior does this improve?**

The opt-in Sentry context for an unconfirmed adapter Stop timeout.

**Current behavior**

The timeout includes execution identity but no pending phase. A session
close, instruction collection, workspace restore, or diagnostic write
can remain pending without producing its completion timing.

**Proposed behavior**

Add a closed-list phase and elapsed milliseconds from the exact live
execution control. Sample them when the timeout fires. Report `unknown`
and a null age when the control or attribution is unavailable.

**Reason and benefit**

The next timeout can identify which operation is still pending. It does
not require task text, paths, provider output, or additional database
writes.

**Breaking changes**

No API or execution behavior change. The existing opt-in error context
gains two fields. Related public work: #14639 added Stop identity
diagnostics; #14866 and #14945 cover instruction cleanup and teardown
outcomes. This change adds pending attribution to those paths. The
native Stop work in #14802 remains separate.

## What Changed

- Add a bounded tracker per execution control. Token scopes support
nested and overlapping awaits. A late release cannot clear a newer
scope.
- Track adapter execution, ACP cancellation and settlement, diagnostic
writes, and host cleanup. Keep a coarse host scope until the executor
finishes.
- Sample only the matching current control and settlement promise at
timeout. Freeze the sanitized result. Use a monotonic clock and cap
elapsed time at one day.
- Test stalled operations, repeated Stop calls, stale and wrong-run
controls, callback failures, scope bounds, and the real Sentry SDK
context.

## Verification

- `pnpm -r typecheck` passed.
- `pnpm build` passed.
- Six focused suites passed: 79 tests. They cover pending scopes, Stop
control ownership, real ACP settlement stalls, and Sentry context
isolation.
- The real Sentry SDK contract ran with the audited optional peer
`@sentry/node@10.71.0` installed outside the workspace. Valid phase and
elapsed values were exported; arbitrary labels and nonfinite elapsed
values were rejected.
- An independent agent reviewed the production diff and ran the focused
tests without blockers.
- `git diff --check` and a redacted Gitleaks scan passed. The local full
`pnpm test:run` was stopped during its large serial server batch to
avoid duplicating the sharded CI suite. No complete local broad-suite
pass is claimed.
- All CI gates passed on `c223237b58aa8d479d1c66d7d399de30270bac4f`: 54
successful checks and two expected Storybook skips. This includes the
full sharded test suite, typecheck, build, real Sentry SDK isolation,
browser tests, canary dry run, and the security scan after the PR became
ready for review.
- Greptile scored the same commit 5/5 with no actionable findings or
unresolved review threads.

## Risks

This is diagnostic instrumentation. Cancellation, deadlines, teardown
order, termination proof, and file recovery proof remain unchanged.
Unsupported or uninstrumented work uses a coarse phase. Tracker overflow
fails closed to `unknown`. The tracker emits no new run-log or Telemetry
event. The existing Sentry opt-in gate remains in place.

## Model Used

OpenAI Codex, GPT-6. The agent used code inspection, local command
execution, automated tests, and an independent agent review. The runtime
did not expose a more specific model identifier or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 16:55:38 -07:00
DottaandPaperclip 862a5758ba fix(agents): reduce hiring templates to role descriptions (#14985)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for work.
> - New agents receive role instructions from onboarding, the hiring skill, or a team package.
> - These sources repeat harness procedures and impose generic work policies.
> - They can crowd out the task and the harness instructions.
> - This pull request reduces those sources to short role descriptions.
> - It preserves configuration, skills, authentication, reporting lines, and approval controls.
> - The benefit is less repeated instruction text with explicit coverage for the default hiring path.

## Linked Issues or Issue Description

Refs #3307. The CEO template can impose a fixed delegation route instead of letting the agent choose how to fulfill the request. This change removes that route. It does not implement autonomous goal selection.

Related work: #14920 preserves stock Codex base instructions. #14948 reduces the generic manual and shared runtime prompts. #14961 improves native completion-tool descriptions. This PR is separate from those changes.

## What Changed

- Select only the short CEO `AGENTS.md` for new default CEO bundles. Keep the three former companion files as compatibility assets.
- Reduce the first-agent chief-of-staff prompt and coder, QA, UX, and security role examples.
- Reduce seven bundled team role bodies. Preserve their role, reporting, and skill metadata. Regenerate the catalog.
- Make hiring examples optional. Replace the long generic role manual with short role drafting guidance. Preserve explicit requester instructions.
- Add configuration and import coverage for native and legacy managed bundles, custom instructions, first-agent rendering, and catalog contents.
- Add an explicit-only hiring eval that starts from the production CEO default and checks one coder hire, independently computed JSON output, saved instructions, and worker reuse.
- Include the full prompt comparison and a separate three-request drafting simulation. Neither is a live provider comparison.

Prompt differences: [before and after](doc/plans/2026-10-02-hiring-template-prompt-diff.md). The CEO default falls from 1,897 to 20 words. The coder example falls from 652 to 18 words. Word counts describe instruction size, not outcome quality or billing.

## Verification

- PASS: 99 focused server tests and eight shipped-catalog tests.
- PASS: catalog generation and validation for four shipped teams.
- PASS: hiring skill validation.
- PASS: `pnpm -r typecheck`.
- PASS: `pnpm build`.
- INCOMPLETE: the full local `pnpm test:run` was stopped before rebase. Its original log is retained. This is not a completed full-suite pass. The full current-head GitHub CI workflow passed: https://github.com/paperclipai/paperclip/actions/runs/37073372419.
- PASS: `pnpm test:e2e:runner:typecheck` and `pnpm test:e2e:runner:unit` (63 files / 843 tests).
- PASS: discovery for the two new hiring cells, 50 existing everyday cells, and the full 438-cell catalog.
- PASS after rebase: 99 server tests, 11 catalog tests, 62 selected E2E support tests, and the E2E typecheck.
- PASS: all current-head PR checks at `57dcee147ed0b2d2e3cc657cd9e50fb16bf9ec25`: 51 successful check runs, two intentional Storybook skips, and successful Snyk status. Fresh Greptile is 5/5 with zero unresolved threads.
- PENDING follow-up: matched live hiring runs on frozen integration refs. No live outcome-quality or non-regression result is claimed from the configuration checks or this merge.

The new suite has two local native cells: Codex and ACPX Claude. It expects five provider turns per cell. It compares source-derived bundles, so the historical long templates remain admissible. Missing successful source-read receipts make a pair uncomparable. They do not establish a behavior regression or equivalence.

## Risks

- New default roles have fewer prescribed procedures. Live checks must determine whether a removed instruction was needed for an outcome.
- Existing custom and saved bundles keep their contents. The retained companion assets avoid a source-file compatibility break.
- Specialized Summarizer, Reflection Coach, and Wiki Maintainer prompts remain unchanged. Their product contracts need separate review.
- The generic non-CEO fallback reduction is in #14948. This PR alone does not provide its eight-word fallback.
- Configuration tests and drafting simulations do not establish live outcome quality. QA, UX, security, and chief-of-staff hiring behavior remain outside the new two-cell comparison.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`.

## Model Used

OpenAI Codex, based on GPT-6, with reasoning, code editing, shell tools, and delegated verification. The runtime does not expose the exact deployment model ID or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context to this change
- [x] I have specified the model used (with version and capability details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template
- [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before requesting merge

Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-10-02 17:56:42 -05:00
Devin FoleyandPaperclip 22cea6b2e6 fix: bound sandbox bridge waits and flag silent runs sooner (#14979)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Sandbox agents exchange input and output through bridge control
commands.
> - A provider can stop responding to a command even when it receives a
timeout.
> - These small commands can inherit a four-hour agent lifetime and
block input or teardown.
> - The board also calls a silent run healthy for the first hour.
> - This pull request bounds bridge control waits and surfaces silence
sooner.

## Linked Issues or Issue Description

**What happened?**

A sandbox run can remain active when a bridge control command never
returns. The shared helper passes a timeout to the provider but does not
enforce it on the host. It also accepts the agent's hours-long timeout.
Output silence remains `ok` for an hour and becomes `critical` only
after four hours.

**Expected behavior**

Bound short bridge operations even if the provider never settles. Report
failed input delivery through the existing shutdown path. Warn after
five silent minutes and escalate after fifteen. Keep normal agent
command limits and require verified termination before releasing
execution ownership.

**Steps to reproduce**

1. Use a sandbox runner whose bridge read or input-upload promise never
settles.
2. Set its configured timeout to four hours.
3. Observe that the old queue client never returns or rejects.
4. Inspect a running task with 35 minutes of output silence. The old
summary still reports `ok`.

**Paperclip version or commit**

Base commit `d6d88b9de2`.

**Deployment mode**

Self-hosted server with sandbox execution.

**Agent adapter(s) involved**

Shared command-managed sandbox bridge, including Codex ACP sessions. The
informational silence thresholds apply to active runs across adapters.

Related: #14889 recovers stalled Daytona output streams; #14485 retries
explicit gateway failures during input delivery. This change bounds
short control operations whose provider promises never settle. It does
not add tool replay or automatic cancellation for output silence. #6297
proposes configurable per-agent silence thresholds; this patch only
changes the existing defaults.

## What Changed

- Enforce at most 30 seconds per bridge control shell command on the
host and provider, including callback startup and shutdown,
process-session launch, and payload setup. Preserve shorter configured
deadlines and launch environments.
- Keep the long-lived agent command outside this deadline. Use a fixed
timeout diagnostic without command payloads.
- Surface suspicious output silence after five minutes and critical
silence after fifteen minutes.
- Decouple the shared-workspace holder cutoff from warning thresholds
and preserve its existing one-hour value.
- Add regressions for hung reads, a late upload response, failed input
delivery, exact warning boundaries, and fresh output clearing warnings.
- Update the adapter guide and execution contract.

## Verification

- The three new queue-client regressions fail on the unchanged base and
pass with this patch.
- Final callback bridge and sandbox session suites: 214 passed. These
cover hung reads, writes, startup, shutdown, process-session launch,
payload setup, and the separate long-running agent limit.
- Stdin ordering and shutdown suite: 56 passed after the lifecycle
change.
- Daytona and watchdog coverage passed in the earlier focused runs.
Across the focused suites, 602 distinct tests pass.
- `pnpm -r typecheck` and `pnpm build`: passed. Server and adapter
typecheck/build also passed after their respective follow-up changes.
- `pnpm test:run`: attempted and stopped after known local failures.
Four chat/email cases used an external ancestor skill path, three
skill-cache cases failed on macOS, and one wakeup case timed out. The
wakeup case passes alone (1 passed, 27 skipped). This run spanned the
workspace-cutoff follow-up and also failed its new holder case; a fresh
final-head workspace suite passes all 19 tests. The interrupted run is
not a full local-suite pass or final-head verification.
- A filesystem queue-drain test failed once during the lifecycle rerun
and passed on the complete two-suite rerun. It uses the filesystem
client, outside the changed command-runner path.
- Complete CI on `ff2212c235`: 53 successful checks and two expected
skips, including the full test suite and canary packaging dry run. No
failed or pending checks.
- Greptile reviewed `ff2212c235` at 5/5. All review findings are
addressed, no threads remain unresolved, and the branch has no merge
conflicts with `master`.
- `git diff --check` and a scan of added text for secrets and private
identifiers passed.

## Risks

- A bridge control operation that needs more than 30 seconds now fails,
even if the caller selected a longer run lifetime. Agent commands retain
their own limits.
- Timing out a provider promise does not cancel the remote operation or
prove it stopped. Existing execution settlement still owns termination
verification. No uncertain tool action is replayed.
- Quiet healthy runs display warnings sooner. Existing snooze, continue,
and false-positive dismissal controls still apply. Silence alone does
not cancel a run, create review work, or change assignments.
- No schema or API shape change.

## Model Used

OpenAI GPT-6 through Codex, with tool use and code execution. The exact
serving model ID and context window are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run change-specific tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 15:29:41 -07:00
Devin FoleyandPaperclip 5b8b2b38ca feat(apps): add Neon connection (#14980)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Agents reach external services through the Apps catalog. Each
catalog entry is a reviewed `AppDefinition` that wires a provider's
hosted MCP server into Paperclip's shared vault, grants, policies,
gateway, and audit trail.
> - Neon is a widely used serverless Postgres provider with an official
hosted MCP server, but it is not in the catalog. Teams that run their
databases on Neon must use the generic "connect your own MCP server"
path, which has no branding, no guidance, and no project or read-only
controls.
> - The connector playbook requires a catalog entry for a provider like
this: the hosted server supports dynamic client registration and bearer
API keys, and the common definition fields can express every option
Paperclip can serialize.
> - This pull request adds the Neon definition, its official artwork,
the research and permission-review ledger rows, documentation, and
deterministic tests, without any provider-specific runtime code.
> - The benefit is a one-click, governed Neon connection with optional
project pinning and read-only mode, and a documented path to live
qualification.

## Linked Issues or Issue Description

**Problem or motivation**

Neon is a common Postgres host for the applications agents work on, but
Paperclip's Apps catalog has no Neon entry. Operators who want agents to
inspect schemas, run SQL, or manage branches must paste the MCP URL into
the generic remote-MCP flow, which gives no branding, no provider
guidance, no project boundary, and no read-only switch.

**Proposed solution**

Add a catalog-only Neon connection built from the connector playbook:
browser sign-in through Neon's dynamic client registration with the
reviewed `read` and `write` scopes, or a customer API key sent as an
Authorization bearer header. Both methods expose Neon's documented
`projectId` pin and `readonly` switch as optional Advanced fields. Every
discovered tool stays governed by the normal per-action policies.

**Alternatives considered**

A plugin was not needed because no custom UI, tables, workers, or
webhooks are involved. A separate read-only method was not added because
the playbook treats read-only switches as advanced fields rather than
methods. Neon's repeatable `category` query filter was left out because
tenant fields serialize lists as one comma-joined value, so it cannot be
sent correctly without new runtime code; per-action policies cover
catalog narrowing instead.

**Roadmap alignment**

This extends the existing self-serve remote-MCP connection catalog and
does not overlap planned core work.

## What Changed

- Added the `neon` provider to `scripts/ingest-app-definitions.mjs`
(category, API-key placement, methods, tenant fields, guidance,
warnings) and regenerated
`packages/shared/src/app-definitions/neon.json` plus the generated
registry.
- Added the Neon row to the self-serve MCP research ledger with
`dcr_or_api_key` auth and risk tier S4.
- Added permission reviews for `neon/mcp-oauth` (explicit scopes `read`,
`write`, taken from Neon's live authorization-server metadata) and
`neon/mcp-api-key` (provider key), with evidence links.
- Added Neon's official tile icon (`ui/public/brands/apps/neon.png`,
copied byte-for-byte from the icon linked by neon.com) and the brand
manifest entry.
- Added prosumer gallery copy for the Neon card.
- Added `doc/connections/NEON.md` (service involvement, endpoints,
administrator setup, capabilities and policy, manifest, brand
provenance, validation hook) and linked it from the connections README
and the permission audit.
- Tests: Neon definition shape, store visibility and artwork, URL
recognition, reviewed scopes with scope-widening rejection, URL
projection of the project pin and read-only flag, invalid project ID
rejection, the connect form's API-key gating, and the pinned catalog
counts.

## Verification

- `pnpm exec vitest run packages/shared/src/app-definitions.test.ts
packages/shared/src/app-definitions-url.test.ts` — 34 passed.
- `pnpm exec vitest run
server/src/__tests__/tool-access-service.test.ts` — 367 passed.
- `pnpm exec vitest run ui/src/pages/apps/AppsConnect.test.tsx
ui/src/pages/apps/Browse.test.tsx ui/src/lib/app-brand-assets.test.ts
ui/src/pages/apps/AppLogo.brand-assets.test.tsx` — all passed.
- `node scripts/check-app-brand-assets.mjs` and `node --test
scripts/app-brand-validation.test.mjs` — passed.
- `pnpm --filter @paperclipai/shared typecheck`, `pnpm --filter
@paperclipai/server typecheck`, `pnpm --filter @paperclipai/ui
typecheck`, `pnpm check:token-gates` — clean.
- Manual: in a local instance, open Apps → Browse, confirm the Neon card
and icon, open `/apps/connect?source=neon`, confirm both methods, the
Advanced project pin and read-only toggle, and that Connect enables
after an API key is entered. The operator completed a live connection
against a Neon account on this build.
- Live metadata probed on 2026-10-02: both `.well-known` documents at
`mcp.neon.tech` return the recorded endpoints and scopes; an
unauthenticated `initialize` returns 401 with `resource_metadata`.

## Risks

- Low risk to existing providers: the change is additive catalog data
plus tests. The generated registry only gains one import.
- Neon's hosted server grants broad project and database management. The
definition carries two warnings, recommends a development project, and
keeps every write under the normal action policies; the read-only switch
is enforced by Neon's server, not locally.
- The permission-review ledger records live proof for both methods as
not run; the full lifecycle checklist in `doc/connections/NEON.md` still
needs a documented pass before the entry is considered fully qualified.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- Claude Fable 5.1 (`claude-fable-5-1`) in Claude Code, with extended
thinking and tool use (shell, file editing, browser verification).

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 15:04:52 -07:00
Devin FoleyandPaperclip d6d88b9de2 fix: preserve run outcomes when agent file cleanup is deferred (#14945)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The heartbeat service records each agent turn and releases its
working files.
> - A turn can save its work and finish before instruction-copy cleanup
runs.
> - A cleanup exception can replace that completed result with an
adapter failure.
> - This also loses result accounting and can prevent environment lease
release.
> - This pull request records a cleanup warning and keeps the original
run outcome.
> - The existing recovery sweep retries cleanup from the durable
working-copy record.

## Linked Issues or Issue Description

Related cleanup and lock work: #14866 and #14869. Related, distinct
work: #14695 retains warm-process files; #12021 handles provider-process
SIGTERM after a terminal result.

**What happened?**

An agent saved its plan, posted a comment, and requested approval. The
provider completed its turn. Instruction-copy cleanup then timed out on
a directory lock. Its exception escaped a `finally` block and replaced
the provider result, so the completed turn showed `Run failed`.

**Expected behavior**

Keep the provider outcome, usage, cost, saved work, and pending
approval. Record a cleanup warning and let the existing recovery sweep
retry. A real provider failure must keep its original error. A failed
file save must keep its failed-save receipt.

**Steps to reproduce**

1. Complete a legacy adapter turn that saves work and requests approval.
2. Make instruction-copy release throw a directory-lock timeout.
3. Read the run result. Before this change, the cleanup error replaces
the provider outcome.

The new heartbeat tests reproduce the failure without a live provider or
external service.

**Paperclip version or commit**

The regression reproduces on `c83df091b1a5207375eaf23466bb5c62e4e1518e`.
This branch is rebased onto `cf8ad63c80`.

**Deployment mode**

Server-managed agent execution with persistent instruction working
copies.

## What Changed

- Catch instruction-copy release failures in both heartbeat teardown
paths. Stop repeating a failed cleanup attempt within the same run.
- Write a sanitized `instruction_cleanup` warning. A warning-write
failure also preserves the run result.
- Test successful, failed, and throwing providers; both teardown paths;
warning-write failure; accounting; approval state; and execution-control
release.
- Extend the held-lock test to prove a fresh recovery worker removes the
deferred copy and preserves its failed-save receipt.
- Document deferred cleanup and the run-log event.

## Verification

- Red proof: all five new heartbeat regression cases fail with the
original release calls.
- At head `20bea4f431c916d2f5db1970213aab85f5daa34c`, all 417 tests
passed across heartbeat process recovery, agent directory working
copies, and directory merge locks.
- Full local `pnpm -r typecheck`, `pnpm build`, and `git diff --check`
passed.
- [GitHub
CI](https://github.com/paperclipai/paperclip/actions/runs/37031119795)
passed at this head. All 53 reported checks passed; the two Storybook
checks were correctly skipped. This includes general and serialized
tests, browser shards, runner verification, build, typecheck, and the
canary dry run.
- Greptile reviewed this head with 5/5, no code comments, and no
unresolved review threads. The branch has no merge conflicts.
- The local `pnpm test:run` attempt was stopped after it reported eight
failures in unchanged suites. Four Slack/AgentMail cases selected an
unrelated ancestor skills directory and failed with `ENOENT`; the two
Slack cases passed with a temporary local skill-root link, which was
then removed. Three company-skill cases reproduced macOS `EACCES` errors
when renaming read-only cache directories. One gateway case passed when
rerun alone. No full local-suite pass is claimed; the complete CI test
jobs passed.

## Risks

- Cleanup errors now leave recovery work pending. The durable
working-copy record remains available for the existing retry sweep.
- This change preserves provider failures and failed-save receipts. It
does not claim that unsaved file edits were saved.
- Native instruction reservation errors retain their existing behavior
because they guard process ownership.
- No schema, lockfile, workflow, API, or UI changes.

## Model Used

OpenAI Codex, based on GPT-6, with reasoning, repository tools, and code
execution. The exact backend model ID and context-window size are not
exposed by this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 14:16:18 -07:00
abderrahmen bejaouiandabderbj 92ad158ce1 fix(claude-local): order Claude models the way the Claude app does (#14917)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Each agent runs on an adapter, and the operator picks the agent's
model from a list the adapter advertises.
> - The `claude_local` adapter advertises a static list and merges in
the models the Anthropic API returns. Neither list has a deliberate
order.
> - The model dropdown then sorts every list by id. For Claude this
shows "Fable 5", "Fable 5.1", "Haiku 4.5", "Mythos 5", "Opus 4.6" ...
which is not the order of capability, release, or version (#14877).
> - This pull request gives the adapter one defined order, the one the
Claude app uses: the newest release of each family first, by decreasing
capability, then older releases grouped by family. The server applies it
to discovered models, and the dropdown keeps the adapter's order instead
of re-sorting.
> - The benefit is that a user who knows the Claude app finds the right
model at once, and older models sit at the end of the list.

## Linked Issues or Issue Description

Fixes #14877.

Related: #14147 touches the same adapter's model list (the
`ANTHROPIC_MODEL` default label) and does not change ordering. #14878 is
the Codex counterpart and depends on the dropdown change in this PR.

## What Changed

- `packages/adapters/claude-local/src/server/model-order.ts` (new):
`sortClaudeModels()` and `parseClaudeModelId()`. The parser reads the
current scheme (`claude-opus-4-8`), the legacy scheme
(`claude-3-7-sonnet-20250219`), dated snapshots, `-latest` aliases, the
`[1m]` suffix, and Bedrock ids (`us.anthropic.…-v1`, `…-v2:0`). The sort
puts the newest release of each family first (Fable, Mythos, Opus,
Sonnet, Haiku), then older releases grouped by family with versions
descending. An alias sorts before its dated snapshots, and dated
snapshots of one release sort newest first. Ids that are not Claude
models keep their incoming order at the end.
- `packages/adapters/claude-local/src/server/models.ts`: apply the order
to the static fallback, to the merged API list, and to the Bedrock list.
Reorder `BEDROCK_MODELS` to match.
- `packages/adapters/claude-local/src/index.ts`: reorder the advertised
`models` list to the same order.
- `ui/src/components/AgentConfigForm.tsx`: `ModelDropdown` gets a
`preserveOrder` prop. With it the dropdown shows the list as the adapter
ordered it; without it the list is sorted by id as before.
`ui/src/lib/model-utils.ts` adds `adapterCuratesModelOrder()`, true for
the built-in adapters whose list arrives in a deliberate order
(`claude_local`, `codex_local`, `paperclip_runner`, `gemini_local`,
`grok_local`, `kimi_local`, `openclaw_gateway`, and `opencode_local` /
`pi_local`, which the server sorts when discovered and which lead with
the default model when it falls back to the declared list). Cursor is
not in the set because its list comes from `agent models` discovery, and
adapters not named there, including externally installed ones, keep the
alphabetical fallback. The three dropdown call sites (`AgentConfigForm`,
`ConfigureBuiltInAgentModal`, `NewAgentSetup`) pass it; `NewAgentSetup`
decides by the resolved brand type, because a `paperclip_runner` agent
fetches the Claude or Codex list for its brand. Grouped lists
(`opencode_local`, `pi_local`) are unchanged.
- Tests: `model-order.test.ts` (adapter, including the snapshot-date
tie-breaker), `ModelDropdown.test.tsx` (ui: preserved order with the
prop, alphabetical without it, provider groups unchanged),
`model-utils.test.ts` (which adapters opt in), and two updated
expectations plus one new order assertion in
`server/src/__tests__/adapter-models.test.ts`.

Mythos is not in the Claude app's list. This PR ranks it directly after
Fable, in the top capability tier. The rank table in `model-order.ts` is
one line to change if you prefer a different slot.

## Verification

Run from the repository root:

```sh
pnpm exec vitest run packages/adapters/claude-local server/src/__tests__/adapter-models.test.ts ui/src/lib/model-utils.test.ts ui/src/components/ModelDropdown.test.tsx ui/src/components/AgentConfigForm.render.test.tsx ui/src/components/ConfigureBuiltInAgentModal.test.tsx ui/src/pages/NewAgent.test.tsx
pnpm --filter @paperclipai/adapter-claude-local typecheck
pnpm --filter @paperclipai/ui typecheck
pnpm --filter @paperclipai/server typecheck
pnpm check:module-boundaries && pnpm check:token-gates && pnpm check:tokens
```

Red on `master`, green here:

- `ModelDropdown.test.tsx` fails against the unmodified dropdown because
the ids come back sorted alphabetically even with `preserveOrder`.
- `adapter-models.test.ts` fails against the unmodified adapter because
the first model is `claude-opus-4-8`, not `claude-fable-5-1`.

Manual check: open an agent that uses `claude_local`, open the model
dropdown. With no `ANTHROPIC_API_KEY` the list reads Fable 5.1, Mythos
5, Opus 5.5, Sonnet 5, Haiku 4.5, Fable 5, Opus 5, Opus 4.8, Opus 4.7,
Opus 4.6, Sonnet 4.6, Sonnet 4.5. With a key, the discovered models slot
into the same order.

## Risks

- The other built-in adapters in the set (Gemini with `Auto` first,
Grok, Kimi, OpenClaw, the runner's Codex list, and the OpenCode and Pi
lists in the built-in-agent modal) are now shown as their adapter
delivers them instead of alphabetized. Cursor's discovered list and
every adapter outside the set, including externally installed ones, keep
the alphabetical order they had, so no option moves between refreshes.
Grouped lists are unchanged.
- The first entry of the Claude list changes from Opus 4.8 to Fable 5.1.
Nothing reads the first entry as a default: `DEFAULT_CLAUDE_LOCAL_MODEL`
is `claude-opus-5` and is resolved separately.
- No API, schema, or migration change.

## Model Used

Anthropic Claude Fable 5.1 (`claude-fable-5-1`) through Claude Code,
extended thinking on, with tool use for reading the repository, running
vitest and tsc, and editing files. The account holder reviewed the
change and owns the commit.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: abderbj <115119179+abderbj@users.noreply.github.com>
2026-10-02 13:24:04 -07:00
DottaandPaperclip 2ec82c5774 fix(runner): preserve task context when tool connections change (#14963)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Agents use tools through company-scoped connections and provider
sessions.
> - Resolving a tool connection currently forces a fresh session even
when the provider can load new tools into the existing conversation.
> - A fresh provider conversation can receive too little history to
continue the task.
> - This pull request adds explicit tool-refresh capabilities and uses
them in both runner paths.
> - Fresh attempts receive bounded task history with source IDs and
retrieval instructions.
> - The benefit is that agents can continue the same task after a
connection changes.

## Linked Issues or Issue Description

**What happened?**

A resolved tool connection forced a fresh provider conversation. The new
conversation could lose the original goal and prior answers. Claude also
rejected resume when only the MCP server set changed.

**Expected behavior**

Resume the provider conversation when its harness can refresh tools.
When a fresh session is required, supply enough bounded history to
continue the task. Preserve company, agent, task, workspace, model,
instruction, and skill checks.

**Steps to reproduce**

1. Start a conversation and agree on a task and its constraints.
2. Request and connect a tool needed for the task.
3. Continue the conversation after the connection resolves.
4. Check that the agent remembers the task and can use the new tool.

**Paperclip version or commit**

The bug was reproduced on master at `c46e41e81`. This branch is rebased
on current master.

**Deployment mode**

Self-hosted server. Both legacy adapters and the native runner are
affected.

Related public work: Refs #13282 for task-backed conversations. Refs
#13057 for the broader session-compaction proposal. Refs #14659 for
another report about local CLI session continuity. This change fixes
tool-connection continuation. Provider authentication repairs keep their
existing recovery behavior.

## What Changed

- Expose tool-refresh support in native harness descriptors and legacy
adapter metadata.
- Request tool refresh after connection resolution. Keep provider
authentication repair as a fresh-session wake.
- Reload current tools and credentials while retaining supported Claude,
Codex, Grok, and other provider conversations.
- Allow MCP-only changes during qualified native recovery. Keep all
other compatibility checks.
- Refresh managed-provider and ACPX tool bindings when attaching a new
run.
- Add a fresh-session handoff for both runner paths. Bound database
reads, excerpts, and the final packet to 24,000 bytes.
- Include the original request, recent messages, decisions, plans, prior
answers, and source IDs. Mark omitted content. Apply reset boundaries,
wake cutoffs, quarantine, and secret redaction.
- Add regression tests and document the capabilities and handoff
behavior.

## Verification

- `pnpm -r typecheck` and `pnpm build` passed. Rust formatting passed.
- Final review fixes passed 314 server tests, 333 adapter utility tests,
139 native-session runtime tests, and 12 managed-provider Rust tests.
They verify historical quarantine, raised budgets across attachment, no
history reads on successful resume, and handoff delivery on fresh retry.
- Broader branch verification also passed 1,401 adapter utility tests,
1,047 runner TypeScript tests, 43 Grok adapter tests, and 311 Rust core
tests.
- Live Claude CLI and Grok ACP probes preserved the provider session ID,
recalled a prior task constraint, and called a newly added read-only MCP
tool.
- GitHub CI passed on `b21486d18084a7aa4cafbe8e012f7cad6585d9cc`: 55
successful checks and 4 skipped checks. This includes all test shards,
all eight browser shards, runner checks, and the Grok clean public npm
install canary. [CI
run](https://github.com/paperclipai/paperclip/actions/runs/37057514976).
- A full local test attempt encountered a separate Git snapshot timeout.
All affected local suites passed after the final edits, and the full CI
test gates passed.
- Review the capability matrix in `packages/paperclip-runner/README.md`.
Repeat the four reproduction steps with a supported provider and with an
unsupported harness.

## Risks

- Provider tool refresh can fail. Existing recovery falls back to a
fresh conversation where policy permits it.
- A new transport can replace an old process while preserving the
provider conversation. Tests cover current credentials and unchanged
identity.
- Long history can omit older context. Explicit markers and source IDs
let the agent retrieve needed context within task scope.
- Unknown and unqualified harnesses use the fresh-session path. No
database migration is required.

## Model Used

OpenAI Codex, GPT-6, with reasoning, tool use, code execution, and live
provider testing. The exact model ID and context-window size are not
exposed in this session. Claude and Grok also ran as test subjects.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 15:11:44 -05:00
Devin FoleyandPaperclip 144083fd48 fix(interactions): wait for workspace readiness before enabling approval (#14893)
## Thinking Path

> - Paperclip lets people manage AI agents and review their work.
> - Task confirmations must use the work produced by their source run.
> - The server blocks approval while that run still needs to sync its
workspace.
> - The card currently enables approval before that check can pass, so
an ordinary click produces an error.
> - This PR exposes the existing readiness check and shows “Preparing
approval…” with acceptance disabled.
> - The card refreshes itself and enables approval when the source
workspace settles.

## Linked Issues or Issue Description

**What happened?**

A confirmation appears while its source run is still preparing or
syncing its workspace. Its enabled approval button returns a conflict
asking the user to retry after syncing.

**Steps to reproduce**

1. Run an agent in an isolated workspace.
2. Have it create a confirmation before workspace finalization
completes.
3. Click the approval button while the source workspace is still active.

**Expected behavior**

The card explains that approval is preparing. Acceptance becomes
available automatically when the same server check permits it. Reject
and revise remain available.

Related work: #10770 handles this conflict after a click with retries.
#9520 proposes changing the workspace acceptance barrier. This PR
preserves that barrier and exposes readiness before the click, including
in compact task chat. It preserves the terminal-finalize behavior from
#10099.

## What Changed

- Add an optional, read-only `acceptanceBlocker` to interaction
responses. Readiness uses the existing source-run workspace predicate,
with one check per pending source run.
- Disable acceptance and show a shared preparation notice in classic and
compact confirmation cards, including checkbox and secret-binding
confirmations.
- Refresh preparing cards every two seconds in task detail, attention,
pipelines, and Skill Studio. Restore each surface's previous polling
cadence when preparation clears.
- Preserve live tool reviews, questions, rejection, revision, and the
server acceptance barrier. No automatic acceptance occurs.
- Document the preparation state and cover readiness, terminal sync
outcomes, unrelated runs, historical cards, and automatic refresh.

## Verification

- Focused service, card, query-refresh, and helper tests: 217 passed
across five files.
- `pnpm -r typecheck`: passed.
- `pnpm build`: passed.
- `pnpm build-storybook`: passed.
- `pnpm check:token-gates`: passed.
- `pnpm test:run`: incomplete locally. Stopped after about 17 minutes
once it reproduced seven existing environment failures: two Slack tests
and two email tests lack ancestor-directory skill fixtures; three
company-skills tests fail on macOS runtime-cache staging permissions.
These are outside this change. The full CI test matrix passed.
- CI: all 53 checks passed; two optional Storybook jobs were skipped.
The branch has no conflicts with `master`.
- Greptile: 5/5 on commit `8a6f216d8d`, with no review threads.
- Reviewed added lines and new files for credentials, private URLs,
internal task references, user paths, and run artifacts. None found.

## Risks

- No database migration or change to acceptance authorization. Readiness
is advisory; the server still enforces its existing gate at acceptance.
- An open preparing card adds a read every two seconds. This cadence
stops after readiness clears; historical cards add no workspace checks.
- Failed or stale finalization retains the existing server behavior.
This PR does not change recovery policy.

## Model Used

OpenAI GPT-6 through Codex. The exact serving model ID and
context-window size are not exposed in this session. Used reasoning,
repository inspection, tool execution, and automated tests. No
sub-agents.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass (217 focused tests; full
local-suite limitations are recorded above)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 13:08:25 -07:00
DottaandPaperclip d034ba7491 fix(interactions): derive question storage from canonical forms (#14946)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Agents request human input through durable issue interactions.
> - A question form has a canonical presentation and a compatibility
storage format.
> - The creation API required agents to write both formats.
> - Tool guidance told agents to split text and choice questions across
those formats.
> - This pull request accepts one complete canonical form and derives
storage fields on the server.
> - The benefit is a complete question card with stable answer and retry
behavior.

## Linked Issues or Issue Description

Related work: Refs #13630 and #14430. PR #13630 addresses the display of
historical partial forms. This change fixes creation and keeps the check
that rejects conflicting new forms.

**What happened?**

A question save supplied three compatibility questions and one canonical
text question. The API correctly rejected the incomplete canonical form.
The Runner's tool description encouraged this split. Sending only a
complete canonical form also failed because the API required
compatibility questions.

**Expected behavior**

An agent sends one complete `payload.questionSet` with every text and
choice question. Paperclip derives `payload.questions` for storage and
answer compatibility. Existing legacy requests remain valid. Explicitly
conflicting dual forms remain invalid.

**Steps to reproduce**

1. Call `paperclip_request_human_input` with `interactionKind:
"questions"`.
2. Send `payload: { version: 1, questionSet: ... }` with a required text
question and a required choice question.
3. The old API rejects the missing compatibility questions. With this
change, it stores both questions and preserves the canonical form.
4. Retry with the same idempotency key. Confirm that only one
interaction exists.
5. Submit both answers. Confirm that the normal resolver and
continuation rules apply.

**Paperclip version or commit**

The branch is based on `cf8ad63c8`. The problem affects the native
Runner and the interaction creation API.

**Deployment mode**

Server deployment with the native Paperclip Runner. Integration tests
use the real interaction service and an embedded test database.

## What Changed

- Add one shared canonical-to-storage projection. Reuse it for native
harness question requests.
- Accept canonical-only question creation at the shared validator and
server boundary.
- Export the input type and update the plugin SDK and its RPC contract.
- Advertise a typed, complete question form in the live and scenario
tool schemas.
- Enforce canonical text and custom-answer constraints before ordinary
or native resolution. Preserve harmless display whitespace.
- Run regex matching in isolated workers with a deadline and resource
limits. Both answer paths await the result before persistence. Saved
native delivery uses the validated answer without taking another worker
slot.
- Update agent guidance and generated Runner contracts.
- Test mixed forms, option-ID collisions, retries, answers, legacy
requests, and conflicting forms.

## Verification

- Interaction service, HTTP route, native bridge, and Runner authority
suites: 221 tests passed after correcting an obsolete tool-description
assertion.
- Shared validator, plugin SDK, CLI, and UI compatibility suites: 67
tests passed.
- Runner core tool-contract suite: 20 tests passed. AJV validates live
and scenario schemas.
- Final review regressions: 172 shared, service, native bridge, and
authority tests passed. These cover text length, pattern, numeric
limits, whitespace, custom option IDs, and historical pending cards.
- Runner session suites: 67 tests passed. Published example tests: 4
tests passed.
- Server typecheck and the shared/server builds passed after the
compatibility fixes.
- Final delivery verification: 35 response-delivery tests passed. The
native delivery regression proves saved answers do not enter pattern
workers; server typecheck and build passed.
- Pattern security and answer-flow verification: 205 tests passed after
repairing the child fixture loader. These cover pathological matching,
event-loop responsiveness, worker concurrency, slot cleanup, HTTP
routes, native delivery, and the full helper in a child process.
- `pnpm -r typecheck` passed on the bounded-worker revision.
- `pnpm build` passed on the bounded-worker revision.
- All 55 GitHub checks passed on `fe457af`; four optional jobs were
skipped. An unchanged Cursor adapter test timed out once in CI, passed
locally, and passed on one failed-job rerun.
- Reviewers can send the canonical-only mixed form above and verify that
the saved interaction contains both canonical and compatibility
questions.

## Risks

- The creation API accepts a new input shape. Stored rows and answer
contracts keep the existing shape.
- The shared projection must preserve synthetic free-text option IDs.
Collision and native round-trip tests cover this behavior.
- Historical partial rows remain readable. New conflicting dual forms,
including written-answer mismatches, remain rejected.
- Existing pending cards retain the written-answer paths offered by
their stored options. Canonical text constraints still apply.
- Ordinary answers now enforce declared canonical constraints before
persistence. Invalid answers leave the card pending.
- Regex validation has a one-second deadline and a four-worker capacity
limit. A complex pattern or capacity error leaves the card pending with
a validation error.
- No database migration or change to company authorization is required.

## Model Used

- OpenAI GPT-6 through Codex. The session exposes the GPT-6 model
family; its exact runtime model identifier and context window size are
not exposed. Used reasoning, tool use, and code execution.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 14:21:11 -05:00
DottaandPaperclip 9786f6df56 fix(runner): preserve credential content in document saves (#14937)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The Runner sends authorized tool calls to the control plane.
> - Agents use these calls to save plans and instruction files.
> - The Runner used diagnostic secret detection to reject execution
arguments.
> - Ordinary credential-related prose could reject a document save
before persistence.
> - This pull request forwards the original arguments and leaves
credential policy to the provider harness.
> - The benefit is reliable saves with useful diagnostic records.

## Linked Issues or Issue Description

Related foundation: Refs #12415 and #14430. No duplicate save-policy fix
was found.

**What happened?**

A `write_document` call failed before the server saved its plan. The
Runner reported `semantic tool input contains credential material;
refusing to execute altered arguments`. The detector also masked
ordinary phrases such as `secret manager` and `credential handling` in
diagnostics. Both TypeScript dispatchers had equivalent execution gates.
One dispatcher also rewrote structured approval and question payloads
before execution.

**Expected behavior**

Paperclip forwards authorized arguments unchanged. The provider harness
decides credential-content policy. Log and audit redaction does not
reject or rewrite save input.

**Steps to reproduce**

1. Send an authorized `write_document` call with a plan that discusses
credential handling.
2. Include an intentional credential value in the body to exercise
harness-owned policy.
3. The old Runner rejects the call. With this change, the document
service stores the exact body.
4. Diagnostic records still mask explicit credential values. Qualified
credential fields, short bearer values, opaque diagnostic pairs, and
valid encoded JSON token headers have regression coverage.

**Paperclip version or commit**

Reproduced at `c46e41e81c03cd3c8b64cf993615b604d7fe8c62`. The branch is
based on current `master`.

**Deployment mode**

Server deployment with the native Paperclip Runner. Local regression
tests use the real document service and an embedded test database.

## What Changed

- Remove credential-content vetoes from Rust admission and both
TypeScript semantic dispatchers.
- Preserve original structured approval and question arguments during
execution.
- Keep transport bounds, schema checks, authorization, idempotency, and
audit masking.
- Require explicit credential syntax or recognized formats for
diagnostic masking. Preserve ordinary prose, metadata, and dotted
identifiers.
- Test exact document persistence, replay, nested argument identities,
and masked audit copies.
- Remove obsolete retry guidance and document harness-owned credential
policy.

## Verification

- `cargo test --manifest-path
packages/paperclip-runner/runner/Cargo.toml --locked -p
paperclip-runner-core --lib --test acpx_event_payload --test
acpx_provider_state --test acpx_provider_turns`: 355 tests passed.
- Focused server and adapter tests: 189 tests passed after rebase. These
include the real document save and the complete tool-gateway suite.
- Semantic dispatcher and conformance tests: 34 tests passed.
- Diagnostic redaction and MCP tests: 46 tests passed, including all six
review examples.
- `pnpm -r typecheck` and `pnpm build` passed on the repaired branch.
- The broad local root suite was interrupted after database fixture
setup failures. The focused database suites passed. CI runs the complete
configured test lanes.

## Risks

- Authorized tool arguments can intentionally contain credentials. The
harness must enforce its content policy.
- Diagnostic detection is narrower. Explicit assignments, credential
fields, and recognized credential formats remain masked.
- The change does not add a database migration or change company
authorization.

## Model Used

- OpenAI GPT-6 through Codex. The session exposes the GPT-6 model
family; its exact runtime model identifier and context window size are
not exposed. Used reasoning, tool use, and code execution.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 14:19:41 -05:00
DottaandPaperclip 839cac1343 fix: request supported offline access for generic MCP OAuth (#14950)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Agents use external MCP tools through the governed gateway.
> - Remote MCP connections can use OAuth access tokens that expire.
> - Some providers issue refresh tokens only after an offline-access
request and consent.
> - Resource scopes hid that identity-provider capability in the generic
connection flow.
> - This pull request requests supported offline access and tests expiry
through a local MCP server.
> - The benefit is continued tool access without another sign-in when
the provider permits refresh.

## Linked Issues or Issue Description

Related PR: #13447 addresses the same OAuth symptom together with
managed Codex configuration. This PR focuses on generic MCP OAuth. It
also covers consent, explicit scope overrides, legacy reconnects, exact
scope persistence, and real HTTP expiry tests.

**What happened?**

A generic MCP resource can advertise only its tool scopes. Its OAuth
server can separately advertise `offline_access`. Paperclip selected the
resource scopes and omitted the offline-access request. A provider could
then issue an access token without a refresh token. Tool access stopped
after the access token expired.

**Expected behavior**

Paperclip adds advertised offline access to the selected tool scopes
when the OAuth server does not exclude refresh tokens. It requests
consent and stores the scopes sent in the authorization request.
Existing connections can discover this capability when the user
reconnects. Providers without this capability keep their existing scope
behavior.

**Steps to reproduce**

1. Run `node scripts/mcp-fixtures/servers/oauth-refresh-fixture.mjs`
from the repository root.
2. Add its MCP URL as a generic connection on a local Paperclip
instance.
3. Approve the test consent page and call `read_status`.
4. Let the two-minute access token expire and call the tool again.
5. Before this fix, the connection needs another sign-in. With this fix,
the call refreshes the token and succeeds.

**Paperclip version or commit**

The integration regression reproduced the missing-refresh-token failure
on the parent of this PR's fix. The same test passes with the fix.

**Deployment mode**

Local development. Automated tests use a loopback HTTP MCP/OAuth server
and a disposable PostgreSQL database.

## What Changed

- Track offline-access capability separately from MCP tool scopes.
- Add supported offline access and consent for generic connections.
- Preserve the actual requested scopes through callback completion and
reconnect.
- Discover the capability for older connections with cached OAuth
endpoints.
- Add a reusable MCP/OAuth fixture with PKCE, token expiry, resource
binding, and refresh-token rotation.
- Test shared and personal gateway calls through two refresh rotations.
Cover scope selection, unsupported refresh, and legacy reconnects.
- Document the behavior and local test commands.

## Verification

- The two real HTTP expiry tests failed before the fix with
`oauth_refresh_missing` after the first token expired.
- Tests passed on the current head: 76 generic MCP regressions, all 365
tool-access service tests, and 4 fixture controls.
- Full workspace `pnpm -r typecheck` and `pnpm build` passed. Server
TypeScript checks also passed after the review fixes.
- All remote checks passed on
`d22909bb34e9d54478c0002077c498ffe105932d`. Greptile gave 5/5 with both
previous findings resolved. The complete local `pnpm test:run` is still
running.
- Run `node --test
scripts/mcp-fixtures/servers/oauth-refresh-fixture.test.mjs` for the
standalone provider controls.
- Run `pnpm exec vitest run
server/src/__tests__/generic-mcp-connection.test.ts` for the Paperclip
integration tests.

## Risks

- Users can see a consent prompt when a generic provider supports
offline access.
- The provider can still decline to issue a refresh token. Access works
until expiry, then the user must reconnect.
- A provider that advertises offline access but rejects the scope
produces an OAuth error. This PR does not add an automatic retry without
that scope.
- Existing grants without refresh tokens need another sign-in. The fix
does not change them in place.
- Curated Apps keep their reviewed scope and authorization-parameter
allowlists. No database migration is required.
- This simulation verifies the suspected failure. The reported internal
MCP server has not been tested.

## Model Used

- OpenAI Codex, based on GPT-6, with reasoning, tool use, and code
execution. The runtime did not expose a more specific model ID or
context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 14:13:59 -05:00
DottaandPaperclip 7a52dcdc74 fix: repair MCP validation and cancelled execution recovery (#14951)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - The tool gateway gives agents access to connected services. Recovery
controls what happens when a run stops.
> - Generated tool names can exceed the provider limit after the MCP
client adds its prefix.
> - The same invalid definition can fail each automatic retry. A
cancelled run can also hold saved messages without showing its cause.
> - This pull request bounds tool names, stops configuration retries,
and retains cancellation evidence.
> - It shows the stopped run and admits saved input only after the
existing safety checks pass.
> - The benefit is a clear recovery path that preserves operator Stop
and prevents duplicate message delivery.

## Linked Issues or Issue Description

**What happened?**

A long connected MCP tool name makes the provider reject the entire
request. Automatic recovery repeats the invalid request. Separately,
unexpected legacy cancellations can leave saved input behind a recovery
hold. The notice does not identify the stopped run or its cause.

**Expected behavior**

Complete MCP names fit the provider limit. Tool-definition errors
require configuration repair. Cancelled runs retain their source and
reason. The recovery notice shows the cause and saved-message count.
Verified unexpected cancellations can start a fresh turn through the
existing admission checks.

**Steps to reproduce**

1. Assign an App gallery connection with a long application key and tool
name to a Claude agent.
2. Start a run. The provider rejects a name over 128 characters,
including its MCP prefix.
3. For cancellation recovery, stop a legacy provider turn without an
operator Stop request and send a user message while the recovery hold is
active.
4. Inspect the recovery notice and the deferred message queue.

**Paperclip version or commit**

Rebased onto master at `cf8ad63c806685bfd7c48e3ed4a919d61a7c55f1`.

**Deployment mode**

Hosted or self-hosted server with legacy Claude or Codex execution.

Related public work:

- Refs #14017. That PR caps name segments. This PR preserves existing
short names and uses stable hash aliases for long complete names. It
also covers classification and recovery.
- Refs #4510. That PR adds a cancellation-source column. This PR records
bounded evidence in the existing run result, without a migration.
- Refs #12552 and #4506. Those PRs suppress recovery after operator
cancellation. This PR preserves operator intent and uses the existing
continuation gates.

## What Changed

- Bound gateway names with the full provider prefix in the 128-character
budget. Retain the original upstream tool name for dispatch and
permissions.
- Classify invalid tool definitions as configuration failures before
diagnostic redaction. Stop automatic retries and continuation attempts
for that error code.
- Persist cancellation source, expectedness, initiator, reason, and
time. Preserve recorded Stop intent when adapter results arrive. Report
unexpected started cancellations with closed diagnostic labels.
- Show the run cause, saved-message count, and Inspect run link. Offer
Continue for eligible unexpected cancellations. Require verified
provider stop, empty tool inventory, ownership, and the existing pause,
budget, approval, and dependency gates. Use the existing queue for
single delivery.
- Add regression coverage and update the execution, MCP gateway, and
run-log documentation.

## Verification

- `pnpm -r typecheck` and `pnpm build` passed.
- `pnpm check:token-gates` passed.
- Ran `pnpm test:run` and completed its workspace and serialized groups.
Initial resource and timing failures passed on isolated reruns. All 149
serialized route suites passed.
- Reran the changed server, adapter, and UI suites after the rebase.
Coverage includes long-name upstream dispatch, configuration retry
suppression, cancellation evidence retention, privacy labels, oversized
run projection, and concurrent saved-message delivery.
- `pnpm test:e2e tests/e2e/legacy-failure-continuation.spec.ts` passed
all six browser scenarios. The recovery notice shows the run cause and
inspection link, and each recovery entry point reaches one new response.
- Added database-backed checks for active, removed, paused, unavailable,
and disabled chat connections. The final continuation and
recovery-notice suites passed 167 tests. Externally bound chats hide
board Continue and show a usable next action.
- All 55 GitHub checks passed on
`42afbf1371dcaeb72646e3d8f65c19ff7cddf8de`. Two unrelated Storybook jobs
were skipped by their normal conditions. Greptile reviewed that commit
at 5/5 with no findings and no open review threads.

## Risks

- Long tool names change to aliases. Existing short names stay
compatible. The original connection and upstream name remain the
dispatch authority.
- Invalid tool definitions no longer get automatic retries. An operator
must repair the configuration before a new attempt.
- Continuation changes apply only to positively identified unexpected
legacy cancellations with complete empty tool inventory. Operator Stop,
unknown historical cancellations, outstanding tools, and unverified
provider termination keep their holds.
- No database migration. The added projection fields are optional.
Cancellation reason and initiator IDs remain local run evidence; Sentry
receives only closed source and initiator-type labels and expectedness.

## Model Used

- OpenAI GPT-6 through Codex, with reasoning, repository editing, shell
execution, and GitHub tool use. The runtime does not expose the exact
model variant or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 13:47:59 -05:00
DottaandPaperclip 7d59de6113 feat(connections): probe provider usage limits on demand (#14936)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Connections store the AI accounts used by legacy and native runners.
> - Subscription accounts can reach session, weekly, model, or paid
usage limits.
> - Operators need to read these limits for a specific stored account
before making a routing decision.
> - This pull request adds an on-demand usage probe to the connection
service and account detail.
> - The result preserves provider limits, reset times, paid usage, and
unknown values for later consumers.

## Linked Issues or Issue Description

**Subsystem affected**

Shared contracts, the connection service and API, and the account detail
UI.

**Problem or motivation**

Managed AI accounts lack a common operation to read their current usage
limits. A local harness probe can read a different login from the
account selected for an agent.

**Proposed solution**

Add `aiConnectionService.probeUsage()` and a board-only connection usage
endpoint. Probe the selected credential grant on request. Support Codex,
Claude, and Grok subscriptions, plus OpenRouter API key limits.

**Alternatives considered**

Harness-specific automatic polling would couple the read to execution
and can read ambient credentials. This change uses the managed
connection credential and leaves scheduling and admission decisions to
later work.

**Roadmap alignment**

This extends the existing Personal & Shared AI Accounts capability. It
adds no routing or quota enforcement. Related: Refs #14459 for managed
OpenAI quota reads; Refs #14781 and Refs #13379 for downstream pacing
and budget work. This operation reads one requested account across all
three subscription providers.

## What Changed

- Add typed usage snapshots and a probe capability flag to managed AI
connections.
- Normalize Codex, Claude, Grok, and OpenRouter responses. Keep model
scopes, provider admission, reset periods, and paid allowances separate.
Preserve unknown values.
- Enforce company membership, credential audience, grant identity, and
connection lifecycle before reading the stored secret.
- Add a board-only `GET
/api/companies/:companyId/ai-connections/:connectionId/usage` endpoint
with `no-store` responses.
- Add manual **Check usage** and **Refresh** actions to account details.
Show compact usage bars, resets, admission and overage status; remove
repeated descriptions and account-default copy. Clear previous results
during a new request or error.
- Add Storybook previews using the production account components for all
four providers, initial checks, loading, and permission errors.
- Add provider, authorization, runner selection, API, and UI coverage.
Document provider sources and live qualification.

## Verification

- Initial provider, authorization, selection, API, and UI validation
passed (96 focused tests): `pnpm exec vitest run
server/src/services/ai-connection-usage.test.ts
server/src/__tests__/ai-connections.test.ts
ui/src/components/ai-connections/AiConnectionUsagePanel.test.tsx
server/src/__tests__/openapi-routes.test.ts`.
- `pnpm -r typecheck` passes for the initial implementation. After
simplifying the UI, 9 usage-panel and date-helper tests, UI typecheck,
token gates, and Storybook build pass. The initial feature module
boundary check also passed.
- Real Codex, Claude, and Grok credentials were saved to encrypted
disposable connections. The actual usage HTTP route returned 200 with
`status: ok`. Legacy and native runner selection checks passed. The
tests started no model turn and exchanged no refresh token. The
disposable databases and vaults were removed.
- Live Claude responses added structured scoped limits. Live Grok
responses omitted included-plan usage. Tests now cover both shapes and
preserve the Grok omission as unknown.
- The full workspace build passes. A full local test run hit a heartbeat
feedback timeout. That case passes in isolation. The duplicate local run
was stopped after all remote checks passed. The Slack ordering and
OpenCode transport CI flakes also pass in isolation and on the CI rerun.


- Current head: `ff3d479029a1c4248190323e221b2803cfb0d79d`. All 54
active checks pass. Two Storybook checks are intentionally skipped by
the workflow. Greptile is 5/5 with no unresolved review findings; the
branch is mergeable.

## Risks

- Subscription usage endpoints can change. Credentials can lack
usage-read permission. The probe returns explicit errors without fresh
limits in these cases.
- A successful probe can contain partial data. Missing utilization or
admission remains unknown. An enabled paid-usage switch does not prove a
funded balance.
- This change adds no migration. It does not change runner admission or
automatic provider selection. Provider requests use fixed endpoints,
disabled redirects, bounded response sizes, and a 15-second deadline.

## Model Used

OpenAI Codex, GPT-6, with reasoning, file editing, shell execution, and
HTTP tools. The session does not expose the exact runtime model variant
or context window size. Real provider credentials were used only for the
authorized live checks.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 11:47:14 -05:00
DottaandPaperclip 6c1a75da49 feat(connections): make AgentMail a default connection with inline setup (#14772)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Connections give agents access to external services.
> - AgentMail needs both a saved key and an inbox assigned to the agent.
> - Chat requests offered a setup link instead of an inline card and
could treat a saved key as complete.
> - Inbox setup also hid address conflicts behind a generic server error
and a separate review step.
> - This pull request makes AgentMail a default connection, adds the
inline card, reduces setup to two steps, and shows conflicts beside the
address.
> - Shared native dropdown styles also give every caret a consistent
inset.

## Linked Issues or Issue Description

**What happened?**

AgentMail requests in chat did not show a usable inline connection card.
Manual setup required extra screens, ignored saved account keys, and
could trap new-address setup in a locked inbox dropdown. Agent selectors
omitted the avatar from the selected value. A taken address could
produce an HTTP 403 from AgentMail and appear as an internal server
error. Native dropdown arrows also touched the right edge of their
fields.

**Expected behavior**

Make AgentMail available as a default connection. Ask for the API key
inline, with a direct link to its provider page. Default human access to
the company and agent access to the requesting agent. Resume the agent
only after an assigned inbox is active. Manual setup should ask for an
agent and email address, then finish. Address checks should run as the
user types. Taken addresses should show clickable alternatives. A domain
dropdown beside the name should prefer a verified custom domain. Setup
should suggest authorized saved AgentMail keys and show agent avatars in
the picker and selected value.

**Steps to reproduce**

1. Ask an agent to connect AgentMail when it has no assigned inbox.
2. Check that an inline API-key card appears and links to the provider's
API-key page.
3. Open AgentMail setup, choose an agent, and request an address that is
already taken.
4. Correct the inline error, refresh, and finish setup with the same
request ID.
5. Inspect native dropdown carets in light, dark, disabled, and
right-to-left states.

Uses the bounded provider-error parser merged in #14768. Related work:
#13256 introduced AgentMail; #14725 expanded connection search.

## What Changed

- Stop recurring email queries for tasks that have no email thread.
Share the query between the thread provider and activity view. Keep
email-task updates and invalidation-based discovery.
- Make AgentMail available without the experimental chat setting. Keep
the catalog, setup and management routes, agent Channels tab, task email
feed, receiving worker, and agent tools available by default. Other
experimental chat providers stay gated.

- Make the email address and copy icon a single clickable action with
the shared Copied! confirmation. Add View inbox linking directly to the
matching AgentMail console inbox, with the address encoded as one URL
path segment.

- Reorganize inbox Settings around the copyable email address, usage
instructions, and receiving status. Move reconnect credentials into a
disclosure and separate the Disconnect action. Add production Settings
stories for active, paused, unassigned-address, revoked, webhook,
long-address, mobile, and reconnect states. Show repair controls when
the inbox has an error. Keep usage instructions tied to an active inbox
with an address.

- Add AgentMail channel intents and an inline key field with the direct
API-key URL.
- Keep setup and retry state tied to the interaction. Require an active
inbox for completion. Preserve company and agent access checks.
- Reduce manual setup to agent selection and email selection. Put the
domain dropdown beside the address and default to a verified custom
domain. Preserve explicit choices across reloads. Keep receiving
settings under Advanced options.
- Check the initial address and edits after a 350 ms pause. Abort
superseded requests and ignore stale responses. Show clickable
suggestions and retain known creation conflicts across reloads.
- Add a company-scoped, manager-only address check using the saved
credential. Search the visible inbox list instead of fetching an
uncreated inbox: live AgentMail retains negative lookups that can break
subsequent access-key creation. Unlisted addresses remain unknown;
creation is authoritative.
- Suggest labeled saved AgentMail keys in both manual setup and the
inline card. Filter by company, provider, active credential, and
current-user grants on the server. Prefer an account key and preserve
the selected key or an explicit new-key choice across refresh. Use
verified scope metadata and bounded concurrent checks for legacy keys.
Never return secret values.
- Catch an inbox-only key before the email step. Allow its existing
inbox only after an explicit choice. Recover old locked drafts at the
key picker. Save the replacement key before retiring an empty draft,
then use a new setup URL so refresh preserves the switched account; stop
if cleanup fails. Preserve already allocated addresses and their
original accounts.
- Use the shared AgentSelect in email setup. Show the canonical agent
avatar in each option and the selected value, including other consumers
of the shared component. Add regression coverage for legacy and current
Lucide agent-mention icon formats.
- Start each catalog Add connection with a fresh setup identity. Honor
Finish setup's exact draft/account/address instead of resuming an
unrelated browser draft. Return Cancel and Done to Connectors and Email
settings to the inbox. Group the task/thread explanation in a How it
Works card.
- Route AgentMail catalog removal through the email inbox control API,
including unfinished drafts. Refresh both the catalog and inbox views.
- Render each inbox management tab separately. Access uses the saved
account grants and agent controls; Conversations and Activity use the
shared persisted email feed. Activity lifecycle actions use the email
API. Reconnect returns to inbox Settings. Conversation failures show a
retry instead of a false empty state. Email delivery recovery stays in
the task.
- Map documented provider address conflicts to a field error. Preserve
actionable messages for other failures.
- Preserve non-secret draft fields across refresh, scoped to the
requested agent. Never save API keys in browser storage. Resume partial
inbox creation with the original agent, address, and request ID.
- Show an already-created address with explicit retry and new-address
recovery instead of locked inputs. Preserve the original inbox and
resumable draft when choosing another address. Distinguish runtime-key
404 errors and log safe provider status/operation/code.
- Apply final agent access once within email setup authorization for a
new account whose original installs are unchanged. Preserve later
permission edits and reused account installs. Support in-place retry of
progress loading.
- Let a failed inline setup change keys after retiring an empty draft.
Persist its replacement setup identity without storing secrets. Recover
a server-saved account when refresh interrupts the save response, while
preserving intentional account changes.
- Render the production setup in Storybook and add error, recovery, and
mobile states.
- Inset native select carets in shared CSS. Preserve custom icons,
listboxes, keyboard behavior, and forced-color controls.
- Add browser regression coverage and an AgentMail Product E2E case with
persisted-state and rendered-card evidence.

## Verification

- Full `pnpm -r typecheck`, `pnpm build`, `pnpm check:token-gates`, and
`git diff --check` passed after the default-availability change.
- All 485 focused tests passed. These cover setup, management, catalog
and route gates, connection intents, email authorization, Cursor
execution, and the OpenAPI contract. All 39 email integration tests run
with the experimental chat setting off.
- The shared polling change passed four behavioral tests, UI typecheck
and build, and token gates.
- `tests/e2e/agentmail.spec.ts` passed with the actual server setting
off. This full-stack browser test uses simulated provider responses. It
covers catalog entry, saved keys, editable address and domain controls,
creation, conflicts, retry, all management tabs, clipboard feedback, the
provider link, and task email rendering.
- In the live local browser, Add connection reached the editable email
step with the saved account key. The verified custom domain was selected
by default. Both domain choices worked. The existing inbox Settings page
remained available. Both active inboxes completed new mail checks with
the setting off. No new provider inbox or email message was created for
this pass.
- Earlier live provider acceptance covered creation on a verified custom
domain, Finish connecting on the reported draft, successful mail checks
after refresh, and catalog removal of disposable draft and active
connections. Clicking the email address copied the exact address and
showed Copied!. View inbox opened the same inbox in AgentMail’s console.
No email messages were sent.
- Production setup and Settings Storybook builds and interactions
passed. Settings states include active, paused, unassigned, revoked,
webhook, long-address, mobile, and reconnect. Receiving and
revoked-access stories had zero accessibility violations.
- Full local `pnpm test:run` on an earlier revision completed with
14,709 passing, 87 skipped, and four transient failures. All four failed
cases passed in focused reruns without product changes. That serial full
local command was not repeated after each follow-up. The latest-head
full CI suite is the final test gate.
- CI found an obsolete browser assertion that hid every channel when the
flag was off. Updated it to keep AgentMail and the Channels surface
visible while preserving the GitHub chat route gates. All 11 provider
browser tests passed locally after scoping the Channels selector to the
agent sidebar. Two initial local attempts stopped at temporary Postgres
initialization. The passing run used a separate disposable database on
the existing local Postgres server; it was removed after the test.
- Updated the remaining sidebar and aggregator discovery assertions for
default AgentMail availability. Ordinary task fixtures now return no
email thread. All 128 sidebar/task-page tests and all 42 aggregator
tests passed locally.
- Latest head `b42bb4cd5cc9f2d01a99ab8026832d5a956ea85f`: full CI
passed, with 54 successful checks including Snyk and two intentional
Storybook skips. The CI run is
https://github.com/paperclipai/paperclip/actions/runs/37020833647. A
fresh Greptile review scored 5/5 with no unresolved threads. Live model
evaluations and inbound/outbound email delivery were not run.

## Risks

- AgentMail no longer needs experimental opt-in. Setup still requires a
human to connect an account and assign an inbox. Inline setup creates an
inbox after a human submits a new or saved key. Company access, agent
access, inbox assignment, and completion checks remain enforced.
- AgentMail read APIs cannot prove global address availability. The
visible-list check is bounded to 100 entries and cannot see inboxes
outside the key’s scope. The UI reports this limitation, suggests
alternatives without claiming they are free, and keeps final creation
conflicts inline. Lookup outages show an error without preventing the
authoritative creation attempt.
- Native select CSS affects the whole app. Custom-icon selects and
multi-row lists are excluded. Forced-color mode keeps the browser caret.
- Saved-key discovery uses stored verified scope metadata and checks
authorized legacy credentials concurrently within a shared three-second
deadline. Provider outages mark legacy choices unavailable; users can
still enter another key. Final use rechecks authorization and provider
access.
- No database migration or transport default change. Live connection
remains the default.

## Model Used

OpenAI Codex, GPT-6, with reasoning, tool use, and code execution. The
exact served model ID and context-window size are not exposed in this
session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass (focused suites; full-suite
limitation documented above)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green (latest head
`b42bb4cd5cc9f2d01a99ab8026832d5a956ea85f`)
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
(latest head `b42bb4cd5cc9f2d01a99ab8026832d5a956ea85f`)
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 10:01:15 -05:00
DottaandPaperclip e00d10d5d5 fix(connections): repair stale AI defaults from agent settings (#14916)
## Thinking Path

> - Paperclip manages AI agents and controls the credentials used for
their work.
> - Managed AI connections resolve each responsible user's provider
default.
> - Agent settings created another account but kept the old default
selected.
> - A rejected provider test left the old account marked as connected.
> - Claude ACP reported a typed login failure as a generic
terminal-access error.
> - This pull request repairs the selected account or selects the new
login explicitly.
> - Agents can save and run with the repaired credential, and failed
logins request sign-in.

## Linked Issues or Issue Description

- Fixes #14831.
- Refs #13867. Environment failures remain separate from
credential-health failures.

## What Changed

- Add an agent-settings action to reconnect an unavailable personal
default in place. Keep its connection, grant, default, and agent access.
- State that a new account becomes the user's provider default. Select
its returned grant before changing the agent binding. Keep the actual
sign-in method.
- Show default-update errors and allow retry without another provider
login.
- Show the agent-access choice. Connection managers start with
company-wide access for their own tasks. Other members start with access
for the current agent.
- Use the server's connection-manager permission in the shared list
response. This includes members with a custom management grant.
- Mark credentials as needing attention after an explicit login
rejection in Test or Save. This includes API-key 401 and 403 responses.
Network, quota, and server failures keep the credential health
unchanged.
- Reuse the credential-generation check so an old failure cannot
invalidate a newer reconnect.
- Route Claude's typed provider `access` failure to the existing
login-recovery flow. Replace its generic terminal-access fallback with a
sign-in message.
- Add regression tests and update the AI Connections documentation.

## Verification

- Red: the UI tests failed on the missing reconnect action, unused
returned grant, missing access choice, and lost default-update error.
The server tests failed because rejected credentials stayed connected.
The real ACP fixture returned `acpx_turn_failed` for typed login
failures.
- Green: 156 tests passed across the AI connection, hiring, agent field,
and New Agent suites. All 37 environment-route tests passed. The Claude
ACP authentication fixtures also passed.
- `pnpm check:token-gates` passed.
- `pnpm -r typecheck` passed.
- `pnpm build` passed.
- The full local `pnpm test:run` passed 707 files and 14,503 tests, then
exited with an agent-conversation timeout and embedded PostgreSQL
startup failures in unchanged suites. The isolated conversation and
migration tests passed on rerun. Later local test groups did not run
after this failure.
- [All CI gates
passed](https://github.com/paperclipai/paperclip/actions/runs/37012669356)
on commit `38513dfe2`. This includes the full test matrix, browser
tests, typecheck, build, Runner checks, and canary dry run.
- Greptile reviewed commit `38513dfe2` and returned 5/5 with no open
findings.
- The regression tests use a real embedded database and a real ACP
fixture process. Live provider sign-in requires a valid account and was
not run.

## Risks

- Connecting a new account from agent settings changes the user's
provider default. The dialog states this before sign-in.
- The displayed access choice can allow all company agents to use the
account for its owner's tasks. Reconnect keeps the existing access.
Server permissions still control installs.
- Claude's typed `access` category maps to the provider's
`auth_required` signal. Tool and workspace request failures retain their
existing classification.
- No database migration or provider credential format changes are
required.

## Model Used

- OpenAI GPT-6 through Codex. The exact served model identifier and
context window are not exposed in this session. Capabilities used:
reasoning, repository tools, code editing, and command execution.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 08:57:52 -05:00
DottaandPaperclip c46e41e81c fix(heartbeat): validate native MCP gateway ownership (#14914)
## Thinking Path

> - Paperclip lets people manage agents and govern their tool access.
> - Native runs receive an immutable MCP tool assignment for one agent.
> - The gateway must enforce that owner when it authenticates a run
token.
> - Older gateway rows stored the owner only in metadata.
> - This change validates the gateway and profile, binds new rows, and
repairs valid older rows on reuse.
> - It also delivers each native assignment once.
> - Other agents cannot use the assignment, and explicit shared gateways
keep their configured scope.

## Linked Issues or Issue Description

Builds on #14012 by @busla (Jón Levy). That PR adds agent binding and
seven regressions. This PR carries that fix onto current master and adds
legacy authentication, profile validation, and duplicate-delivery
coverage. Related: #14864 improves discovery memory use.

**What happened?**
Native gateway creation stored an owner in metadata but left `agentId`
null. Authentication could therefore accept another agent's run token.
Managed discovery could also deliver historical native assignments
again.

**Expected behavior**
A native assignment accepts only its owner's run token. The gateway and
profile must refer to the same immutable assignment. The current
assignment enters the run configuration once.

**Steps to reproduce**
1. Run the database fixtures in `heartbeat-runtime-mcp-servers.test.ts`
on the baseline.
2. Create a native assignment and inspect its stored gateway owner.
3. Authenticate with another agent's run token, then inspect legacy
reuse and managed delivery.
4. The baseline fails six ownership and delivery cases. The fix passes
all twelve cases.

**Paperclip version or commit**
The red baseline is `f2e0f1963`. This PR is based on `cad26c6bf`, which
includes the merged discovery fix.

**Deployment mode**
Native Paperclip Runner execution and managed Codex MCP delivery.
Reproduction uses isolated database and HTTP fixtures.

## What Changed

- Store the agent owner and agent context on new native gateways.
- Validate profile and gateway assignment metadata before reuse or token
creation.
- Bind valid legacy rows with a company-scoped, null-owner update and
validate the result.
- Reject mismatched run tokens before legacy repair.
- Identify native assignments by gateway metadata, the reserved profile
key, or profile source. Reject missing or malformed provenance,
including JSON null.
- Exclude historical native assignments from managed gateway delivery.
Keep their rows for existing runs.
- Add twelve database and HTTP regressions and document the runtime
contract.

## Verification

- Red baseline: six regressions fail and four controls pass before the
initial fix. Two additional regressions reproduce metadata-loss
admission and a JSON-null TypeError before the review fix.
- All twelve ownership regressions pass on the final code, including
owner admission, cross-agent rejection, metadata loss, JSON-null HTTP
401, and explicit shared-gateway admission. Policy, listing-memory, and
discovery HTTP coverage also passes.
- Full workspace typecheck and build pass locally. Server typecheck and
compilation pass again after the review fix. The final ownership and
grant patches pass 42 combined database and HTTP regressions.
- [Full
CI](https://github.com/paperclipai/paperclip/actions/runs/37011383657)
passes for `626a08ae66361cf586105877e24d806b1a7a9c20`: all 54 checks
succeed; two optional Storybook checks skip. This includes full
typecheck, build, all test shards, all eight E2E shards, runner
verification, and the canary dry run.
- Greptile scores that exact head 5/5. No review threads remain
unresolved.

## Risks

Invalid historical native gateway or profile metadata now rejects
authentication. Valid unbound rows are repaired only when their owner
reuses the assignment. Conflicting owners are never overwritten.
Historical rows are retained for existing runs. Explicit shared gateways
use ordinary profiles and keep their configured scopes. The reserved
native profile namespace remains agent-owned even when gateway metadata
is cleared. No schema or dependency changes are included.

## Model Used

Original fix and seven regressions in #14012: Anthropic Claude Opus 5.5,
`claude-opus-5-5`, 1M context, as reported by @busla. Extensions and
verification: OpenAI Codex (GPT-6), with reasoning, repository
inspection, code execution, and tests. This session does not expose the
exact serving model identifier or context window.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 08:22:33 -05:00
DottaandPaperclip 483dbc8890 fix(tool-access): enforce stored grant restrictions (#14915)
## Thinking Path

> - Paperclip governs the tools that agents can discover and call.
> - Stored grants can limit access to a tool, connection, or
application.
> - The grant matcher must enforce every restriction in that scope.
> - A nonmatching allow list fell through to a policy selector matcher
that ignores allow.
> - This change requires an explicit allow match and validates
additional selectors.
> - Malformed and unknown restrictions deny access.
> - Discovery and execution now enforce the same stored grant limits.

## Linked Issues or Issue Description

Related: #14864 adds the shared database and HTTP discovery fixture used
here. Searched existing public PRs for tool grant scope fixes. No
duplicate scope-validation fix was found.

**What happened?**
A stored grant with a nonmatching `scope.allow` could authorize a tool.
Empty or malformed allow lists, unknown selectors, and combined
mismatching selectors could also authorize access. The fallback policy
matcher does not validate stored grant JSON.

**Expected behavior**
An explicit allow list must match the requested tool, connection, or
application. Every additional selector must also match. Unknown or
malformed restrictions must deny access. Existing null and empty-object
scopes keep their broad grant behavior.

**Steps to reproduce**
1. Run `tool-grant-scope.test.ts` on the baseline.
2. Create a deny profile and a grant that names another tool.
3. Attempt discovery or a call for the tool outside the grant.
4. The baseline authorizes access. The fix denies it.

**Paperclip version or commit**
The red baseline is `f2e0f1963`. This PR is based on `cad26c6bf`, which
includes the merged discovery fix.

**Deployment mode**
The company-scoped MCP gateway. Reproduction uses isolated database
fixtures and a deterministic HTTP provider.

## What Changed

- Require an explicit allow entry to match the gateway or upstream tool
name, connection, or application.
- Apply all additional selectors after the allow match.
- Reject unknown selectors, invalid value types, empty restrictions, and
non-object scopes.
- Preserve null and empty-object scope compatibility.
- Add sixteen regressions, including discovery, successful execution,
and revocation through the HTTP gateway.
- Document stored grant scope behavior.

## Verification

- Red baseline: seven restricted-scope cases and three malformed-root
cases fail. HTTP discovery also exposes tools outside the grant.
- All 16 grant regressions and 35 adjacent policy tests pass locally.
The HTTP test excludes an ungranted tool from discovery, returns 403 for
its call, and verifies that no provider call occurs. It also checks
successful execution and later revocation.
- Server typecheck passes. The final ownership and grant patches also
pass 42 combined database and HTTP regressions.
- [Full
CI](https://github.com/paperclipai/paperclip/actions/runs/37011177989)
passes for `803fa9440111742672c94c4471e5b98f15dd3b97`: all 54 checks
succeed; two optional Storybook checks skip. This includes full
typecheck, build, all test shards, all eight E2E shards, runner
verification, and the canary dry run.
- Greptile scores that exact head 5/5. No review threads remain
unresolved.

## Risks

Stored scopes with unknown keys or malformed restrictions now deny
access. Operators must correct those grants before they can authorize
tools. Null and empty-object scopes keep their previous broad behavior.
There are no schema, dependency, or API changes.

## Model Used

OpenAI Codex (GPT-6), with reasoning, repository inspection, code
execution, database regressions, and HTTP tests. This session does not
expose the exact serving model identifier or context window.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 08:21:40 -05:00
cad26c6bfb fix(tool-gateway): bound MCP discovery memory and concurrency (#14864)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - Agents discover governed tools through the MCP gateway.
> - A listing repeated policy and full run-row reads for each catalog
tool.
> - Parallel listings multiplied those allocations during run startup.
> - One 900-tool baseline listing used 11,489 queries and about 1.7 GiB
of extra heap in a fixture.
> - This pull request shares reads within a listing and bounds whole
listings across the process.
> - The benefit is lower discovery memory use while execution still
checks current policy.

## Linked Issues or Issue Description

Refs #13115. Its on-demand target change affects the same listing loop.

**What happened?**

MCP discovery repeated roughly 13 reads per tool. Full run snapshots and
repeated connection configurations caused large allocations. Per-listing
bounds alone did not limit concurrent listings across gateways.

**Expected behavior**

Discovery reads shared inputs once per listing. The process bounds
active and queued listings. Catalog payload size and policy evaluation
still grow with the catalog. Tool execution checks current access rules.

**Steps to reproduce**

Create a company with a remote MCP connection, 900 catalog tools, large
schemas, and a large run snapshot. Send concurrent tools/list requests
using a run-bound gateway token. Run the committed benchmark for a
deterministic reproduction.

**Paperclip version or commit**

Baseline: f2e0f19630. Measured on Node
26.4.0 on macOS.

## What Changed

- Keep Michael Nguyen's per-listing policy cache, scalar policy reads,
16-decision bound, and catalog/connection split under repeatable read.
- Admit two whole listings per process and queue at most 32. Return 503
with tool_discovery_busy when full.
- Propagate disconnects to discovery. Stop scheduling new reads and
drain started reads before freeing the slot.
- Project context IDs in gateway authentication and GitHub runtime
discovery. Avoid loading task descriptions and results.
- Keep discovery audit counts and a SHA-256 digest instead of the full
name list. Retain access and activity audit records.
- Sweep expired named gateway tokens at startup and on the existing
scheduler. Delete at most 500 per pass. Add an idempotent expiry-index
migration. Resolve audit token references atomically so cleanup cannot
break admitted requests.
- Return GET 405 with Allow: POST on stateless MCP gateway and
runtime-tools endpoints. Keep runtime-tools authentication.
- Add red-green regressions, HTTP concurrency and policy-revocation
coverage, and browser approval assertions.
- Commit the benchmark harness, raw results, and resource-bound
documentation.

## Verification

- Baseline listing regressions failed with 722 queries for 50 tools and
6,422 for 500. The connection-row duplication regression also failed.
- Follow-up regressions failed before the fixes for full snapshot reads,
abandoned listings, full name-list audits, and expired tokens.
- Listing and scheduler tests: 14 pass. Existing gateway/policy suites
passed after preserving the cleanup return contract.
- Two HTTP journeys pass: initialize, GET/SSE rejection, 16 concurrent
500-tool listings, provider call, policy revocation, and denied retry.
Token cleanup during provider dispatch also completes successfully and
blocks subsequent requests.
- pnpm test:e2e tests/e2e/mcp-user-stories.spec.ts --grep
'@mcp-runnable': 8 pass. The approval journey clicks Allow once in the
browser. Review screenshots wait for loaded content.
- pnpm -r typecheck: passes. pnpm build: passes.
- The general server group completed with 14,755 passes and 18 failures.
The 17 startup mock failures were fixed; all 21 startup tests pass on
rerun. The one Discord timing failure passed on the unchanged baseline
and on rerun (74 tests). UI and CLI groups pass 7,632 tests. Shared and
skill groups pass 853 tests. The remaining database and adapter groups
pass 3,010 tests with one worker after a macOS shared-memory limit
interrupted a parallel run. All 149 serialized route files pass (2,762
tests).
- At 900 tools, one listing falls from 11,489 to 36 queries and from
about 1.7 GiB to 37 MiB of extra heap. Sixteen concurrent listings used
169–187 MiB of extra heap. Four connections used 39 queries per listing.
- Latest-head verification: 54 successful checks and two expected skips
on 5c0793090c. Fresh Greptile review: 5/5
with no unresolved threads.
- Reproduce with server/scripts/benchmark-tool-gateway-listing.ts. See
doc/mcp-discovery-performance.md and
doc/benchmarks/2026-10-01-mcp-discovery.json.

## Risks

- The process-wide FIFO queue can increase discovery latency. Excess
callers must retry 503 responses.
- Cancellation applies to discovery. Started database reads finish
before their slot is released.
- Audit consumers must use visibleToolCount and visibleToolsHash instead
of visibleTools.
- The expiry index can briefly lock the token table during migration.
Sweeps preserve unexpired and non-expiring tokens.
- Measurements use isolated fixtures and deterministic providers. They
do not establish a production heap limit or affected installation count.
Rate-limit reads remain uncached.

## Model Used

- Original listing optimization: Anthropic Claude Opus 5.5
(claude-opus-5-5), Claude Code, extended thinking and tool use, as
recorded by the original author.
- Follow-up fixes and verification: OpenAI Codex, GPT-6, with shell
execution, file edits, database fixtures, and browser tests. The exact
serving model ID and context window are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with Fixes / Closes /
Refs OR (b) described the issue in-PR following the relevant issue
template
- [x] I have not referenced internal/instance-local Paperclip issues or
links
- [x] My branch name describes the change and contains no internal
Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
Co-authored-by: Dotta <bippadotta@protonmail.com>
Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-02 07:45:27 -05:00
Devin FoleyandPaperclip 4a999089ef Retry transient failures in dashboard reads (#14873)
## Thinking Path

> - Paperclip shows company activity in the dashboard.
> - The dashboard reads company, task, approval, and cost data.
> - A pooled database connection can close during one of these reads.
> - The driver must reject ambiguous statements because writes may have
committed.
> - These four dashboard queries are known to be read-only.
> - This change retries only the failed read and preserves completed
work.

## Linked Issues or Issue Description

Refs #14773, which correctly removed automatic replay of ambiguous
database statements. Searched existing database and dashboard PRs.
Related #8780 changes pool recycling and logging; #13925 adds dashboard
consistency coverage. Neither provides these per-query retries.

**What happened?**

A dashboard request returns a server error when its company lookup, task
count, approval count, or monthly spend query loses its database
connection. Drizzle wraps the driver's connection error in `cause`.

**Expected behavior**

A transient connection failure gets a bounded retry of the specific
read. Completed reads and budget processing are not replayed. Persistent
outages and non-connection errors still fail the request.

**Steps to reproduce**

Inject a typed `CONNECTION_CLOSED` error into one of these reads. Then
allow the next query to succeed. Before this change, the dashboard
request fails immediately.

## What Changed

- Apply independent retries to the company lookup, task counts, pending
approval count, and monthly spend query. Each callback rebuilds its own
query with the same company scope.
- Extract the existing authentication retry helper as
`retryIdempotentDatabaseOperation`. Preserve authentication behavior and
its existing exports.
- Retain the existing limit of three total attempts with 50 ms and 100
ms pauses. Match typed connection codes through the error cause chain.
- Test later-read failures, unchanged query parameters, retry
exhaustion, missing companies, and errors that must not retry. Document
the boundary.

## Verification

- Final focused dashboard, authentication, and real database wire
suites: 38 tests passed. Six initial recovery regressions failed before
the implementation.
- `pnpm -r typecheck`: passed on the final source.
- Independent review: no actionable findings. The reviewer separately
passed all 38 focused tests and checked the code allowlist, attempt
bounds, pauses, and final error identity.
- `pnpm test:run`: the general-server group completed with 14,738 tests
passed, 13 failed, and 87 skipped. All 13 failures match the previously
reproduced clean-base macOS skill-cache failures. The two test files and
their implementations are unchanged from that baseline. The runner
exited after this group, so the remaining local workspace and serialized
groups did not run. All corresponding Linux CI groups passed on this
commit.
- `pnpm build`: passed on the final source.
- Full CI: 53 successful checks and 2 skips on `6a113529c0`. Greptile:
5/5 on that commit, with no review threads or remaining findings.
- Merge compatibility with master `f2e0f19630`, including #14866: no
conflicts. The five reviewed files are unchanged in the resulting merge
tree.

## Risks

A persistent outage adds at most two retries per covered query. Each
connection attempt retains the configured driver timeout. The change
does not repair the underlying network or database failure. Agent
counts, run-activity queries, and the budget workflow stay outside these
retry boundaries. General database statements and disconnected
transactions are not replayed. There is no schema or authorization
change.

## Model Used

OpenAI GPT-6 through Codex, with reasoning, repository inspection, code
editing, and test execution. The runtime does not expose a more specific
serving model identifier or context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change and contains no internal
Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass (38 focused tests; the full
local run has the baseline limitation documented above)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-01 19:23:47 -07:00
427e048405 fix(company-skills): approve managed-checkout project dirs for local skill import (#10329)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - Company skills can be imported into a company from a local folder;
`companySkillService.importFromSource` guards this with
`assertLocalImportSourceAllowed`, which only permits import sources
inside an approved set of roots (managed skills root + registered
project-workspace cwds), realpath-resolved and `${root}${sep}`-anchored
to prevent path traversal/escape
> - A project can exist as a `managed_checkout` (server-managed clone)
with **no registered `project_workspaces` row** — its `primaryWorkspace`
is `null` and `workspaces` is `[]`, so its only real on-disk location is
the server-derived `codebase.managedFolder`
> - Because `configuredRoots` was built solely from the managed skills
root and `workspaces[].cwd`, a `managed_checkout` project's
`managedFolder` was never an approved root, so importing a skill from
that project's own folder was rejected with
`skill_workspace_boundary_denied`
> - This PR adds each project's server-derived `codebase.managedFolder`
to `configuredRoots` so in-place skill imports from managed-checkout
projects are allowed
> - The benefit is that managed-checkout projects can re-import their
own skills in place, without weakening the traversal/escape protections
(the new roots are server-derived and matched exactly like the existing
ones)

## Linked Issues or Issue Description

No public GitHub issue. Describing in-PR (bug):

**What's wrong:** `assertLocalImportSourceAllowed` denies a legitimate
local skill import (`skill_workspace_boundary_denied`) for any project
that is a `managed_checkout` with no registered workspace row.

**Repro:** Create/import a company skill from a `managed_checkout`
project's own folder (`codebase.managedFolder/.agents/skills/<skill>`).
The import is rejected even though the source is inside the project's
server-managed checkout.

**Expected:** The import from a managed-checkout project's own
`managedFolder` subtree should be allowed, while paths outside that
subtree remain denied.

Related context (already merged): #9564 introduced the open-by-default
skill policy / this import boundary. This PR does not change that
boundary's matching logic — it only adds a missing, server-derived
approved root.

## What Changed

- `server/src/services/company-skills.ts`: add
`...projectRows.map((project) => project.codebase.managedFolder)` to
`configuredRoots` in `assertLocalImportSourceAllowed`. `managedFolder`
is server-derived (`resolveManagedProjectWorkspaceDir(companyId,
projectId)` → instance root + sanitized ids); it is
`fs.realpath`-resolved and `${root}${sep}`-prefix matched exactly like
every existing root. `managedFolder` is used rather than
`effectiveLocalFolder` because the latter can fall through to a
user-registered `localFolder`, which is already covered by the
registered workspace cwds.
- `server/src/__tests__/company-skill-import-boundary.test.ts`: add a
regression test — a managed-checkout project's `managedFolder/<skill>`
import is **allowed**, and a **prefix-adjacent sibling** (`managedFolder
+ "-evil"`) stays **denied**.

## Verification

- `cd server && ./node_modules/.bin/vitest run
src/__tests__/company-skill-import-boundary.test.ts` → **2/2 pass**
(embedded-Postgres suite). Covers both the new allow case and the
prefix-adjacent deny case, alongside the existing out-of-tree /
symlink-escape / non-file-scheme rejections.

## Risks

Low risk. The change only **adds** approved roots; it does not alter the
realpath + `${root}${sep}`-anchored matching that closes
traversal/prefix-adjacency escapes. The added roots are fully
server-derived from the instance root + sanitized company/project ids
(same trust class as the existing `resolveManagedSkillsRoot`) — no value
derived from the import `source` argument reaches them. Sanitization
(`[^a-zA-Z0-9._-]+ → -`) prevents separator/level injection, and the
only user-influenced segment (repo name) is normalized via `new
URL(...)`. The regression test's prefix-adjacent (`-evil`) case asserts
the escape class stays closed.

## Model Used

Claude Opus 4.8 (`claude-opus-4-8`), extended thinking + tool use (code
execution, git). Implementation and security review were produced with
Claude; this integration/PR was prepared with `claude-opus-4-8`.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [ ] I have updated relevant documentation to reflect my changes (N/A —
internal boundary fix, no user-facing docs)
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green (CI in progress)
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
(pending review)
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>
Co-authored-by: brandonburr <brandonburr@gmail.com>
2026-10-01 17:34:51 -07:00
Devin FoleyandPaperclip f2e0f19630 Defer agent directory cleanup until stop proof is available (#14866)
## Thinking Path

> - Paperclip manages agents and their persistent files.
> - Each run owns a temporary agent directory and a save receipt.
> - Cleanup needs independent proof that the owning process stopped.
> - A cleanup call without that proof currently waits for the directory
lock anyway.
> - A second lock failure can prevent environment release after the run
already reported a failed save.
> - This change skips cleanup that has no authority and retries
unavailable remote copies after exact destruction proof.
> - The save failure stays visible. Existing lock owners remain
protected.

## Linked Issues or Issue Description

Related work: Refs #14787 (lock diagnostics), #14695 (warm instruction
ownership), #9667 (stale lock proposal), and #9872 (control-plane
ownership proposal). I checked open PRs and issues. This change leaves
the shared filesystem lock protocol in place and does not duplicate the
warm-retention work in #14695.

**What happened?**

Heartbeat cleanup records an explicit unavailable instruction-save
warning, then calls directory release before releasing the environment
lease. Release can wait for a lock even though the copy has no
process-stop proof and cannot be removed. That secondary timeout
prevents the following lease-release step. If destruction proof arrives
later, the unavailable copy is excluded from both recovery queries.

**Expected behavior**

Skip a release that cannot remove anything. Preserve the failed-save
receipt and candidate fields. Once exact remote destruction is recorded,
recover remote cleanup without running a provider command. Unavailable
local copies retain their potentially uncollected edits even if local
stop proof arrives later. A blocked cleanup must not prevent cleanup for
other agents.

**Steps to reproduce**

1. Prepare an agent directory, report its save unavailable, and leave
process-stop proof absent.
2. Hold the shared directory lock and call release. Before this change,
release waits and fails although removal is not authorized.
3. Record destruction of the copy's exact remote lease. Before this
change, neither recovery sweep selects the unavailable copy.

**Paperclip version or commit**

Reproduced against `efc2e6810e9bc0dc8cb412b0e7647c0db9821caa`.

**Deployment mode**

Local and remote execution with persistent agent directories. Tests use
an isolated embedded PostgreSQL database and fixture transports.

## What Changed

- Re-read receipts and skip release before lock acquisition when stop
proof is absent, the copy is superseded, or cleanup is complete. Keep
the same checks inside the lock.
- Recover unavailable remote copies only after exact destruction proof.
Preserve their unavailable state, errors, candidate hash, and candidate
bytes. Keep unavailable local copies and their uncollected edits
unchanged.
- Store destruction-only cleanup authority with the stop proof. Later
cleanup honors it after a lost database response or restart, including
when a transport remains cached.
- Defer failed or unproven cleanup with bounded batches and a retry
delay. Keep failed cleanup visible in logs and its receipt.
- Serialize preparation of an existing run with cleanup. Fresh run
preparation keeps its existing admission path.
- Cover held locks, receipt scope, delayed proof, batch fairness, lost
update responses, cached transports, and concurrent same-run preparation
with database regressions.

## Verification

- Focused directory, legacy instruction-copy, shared lock, and bounded
diagnostic suites: 169 tests passed across four files.
- `pnpm -r typecheck`: passed on the final source.
- `pnpm build`: passed on the final source.
- Completed all selected local `pnpm test:run` groups: 733 general
server suites, 149 serialized suites, and 14 workspace projects. There
are 13 known macOS `EACCES` failures in the unchanged runtime skill
cache tests. Their exact signatures match earlier clean-base results,
and the cache source and test blobs match both that base and this PR
base (existing fix: #14290). One CLI import test timed out under
concurrent load; its full file passed separately (17 tests). Broad
coverage began before the review corrections; the final source has the
focused 169-test run, typecheck, and build. This is a local verification
limit, not a passing full local suite.
- `git diff --check` and local Gitleaks plus private-identifier/PII diff
scans passed.
- Independent review of the final source found no remaining actionable
issue. Its 17 targeted tests cover crash recovery, cached transports,
same-run preparation, real local edit preservation, proof scope, and
batch fairness. The main focused run also covers contained scheduling
failures.
- Final commit `35a24085f7`: Greptile 5/5 with no recommendations and
zero unresolved review threads.
- Final commit `35a24085f7`: all 53 checks passed, including Canary Dry
Run and the security scan; two visual checks were intentionally skipped.
The workspace shard passed on retry after GitHub reported that its first
runner lost communication. An earlier Canary runner shut down after the
release dry run passed. Neither interruption recorded an application
assertion failure; the exact final-head checks are now green.

## Risks

- This repairs cleanup ordering and recovery eligibility. It does not
repair an ambiguous legacy lock owner or restore unsaved files. Actual
collection still fails visibly when its lock cannot be acquired.
- An unavailable remote copy is recovered only after exact destruction
proof. A stopped but retained environment stays protected; recovery does
not execute a command that could restart it.
- Unavailable local copies with later stop proof still retain
potentially uncollected edits. A general local recollection or
reclamation policy remains outside this change.
- Existing-run preparation now waits for the same lock as cleanup. The
fresh-run path is unchanged.
- The cleanup mode is stored in the existing private receipt JSON. No
schema migration or public API change is required.
- No deployment, task replay, or runtime lock deletion was performed.

## Model Used

OpenAI GPT-6 (Codex), with reasoning, repository tools, and test
execution. The runtime does not expose a more specific model suffix or
context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` OR (b) described the issue in-PR following the relevant issue
template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub references)
- [x] My branch name describes the change and contains no internal
Paperclip ticket id
- [ ] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-01 14:28:47 -07:00