76 Commits

Include renames

Author	SHA1	Message	Date
DottaandPaperclip	3023aa2f61	Merge current master and preserve dedicated Dot agent gateway ... Co-Authored-By: Paperclip <noreply@paperclip.ing>	2026-10-06 21:24:43 -05:00
DottaandPaperclip	a6306ba606	feat(runner): consolidate Cursor production integration (#15075) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The native Runner keeps provider sessions under company authority, approvals, budgets and durable recovery. > - Cursor work was spread across candidate branches. The published branch lacked later plan, permission and cleanup fixes. > - Production also needs public installation and matching runtime assets for local and Daytona execution. > - This pull request consolidates Cursor onto current mainline recovery behavior and completes that installation path. > - The installed v11 release passed focused local and Daytona qualification after the generic mode and lifecycle cleanup. The later model-selection correction and current mainline merge produce v14 artifacts that need matching release qualification. > - Cursor admission is enabled in source; publish only an artifact combination with matching qualification. Native AskQuestion and complete per-run dollar accounting remain excluded. ## Linked Issues or Issue Description Refs: #14435, #14631, #14669, #14699, #14724. This completes the Cursor implementation by @cryppadotta from combined source `22c78242a4e0c2369fecf0c2dc4e7600fbad6706`. It preserves newer mainline recovery, completion and warm-directory behavior. Pi and Copilot remain gated. ## What Changed - Generate named Rust and TypeScript ACPX release profiles from one manifest. Share runtime pins with packaging and server verification. Preserve vendor runtime versions; bind the updated ACPX patch to Cursor profile v14 and reject stale generated declarations at build/typecheck. - Remove ACPX model allowlists, including the former Codex and Pi restrictions and the duplicate developer test-drive gate. Send any explicit model ID unchanged to its provider and verify the effective selection before prompting. The bundled ACPX package forwards unlisted IDs, rejects mismatched acknowledgements, and restores the exact selection after session load. It does not expand Cursor model aliases. Provider rejection, mismatch, or missing model controls fails without a fallback. Model examples live in evaluation fixtures, outside runtime declarations. - Add pinned Cursor execution, contained instructions, exact model verification and Agent/Plan/Ask modes. - Carry an opaque generic `mode` identifier in shared native execution, sidecar, Rust and recovery contracts. The provider adapter owns supported modes, defaults, native translation and acknowledgement. - Keep native RPC recognition, accepted-plan interpretation and permission evidence behind provider adapters. Shared settlement and recovery verify normalized facts and their committed evidence. - Replace the Cursor-only warm-attachment branch with a runner-owned capability. Only Cursor opts into it. Move profile compatibility and optional usage parsing into provider metadata and adapters. - Write generic plan-wait receipts. Read exact historical Cursor receipts through a separate compatibility decoder. Reject mixed formats and preserve existing authority checks. - Carry native plans, semantic questions, todos, child activity, permission identities and partial usage diagnostics through the Runner. - Preserve durable response delivery, cancellation, warm ownership and process retirement. - Finish accepted planning runs successfully. Keep their tasks open for explicit direction. Acceptance does not start implementation. - Ship `paperclipai runtime setup cursor` and its provisioner through the public package. npm installation does not download Cursor. Setup uses the OS account's closure-keyed cache so system-wide npm packages can remain read-only. Run it as the Paperclip service account. - Include Cursor in normal provider packs and Daytona images for macOS ARM64/x64 and Linux x64. - Reject stale release packs by source revision and current ACPX/Cursor pins before assembly writes files. Verify current Cursor version/profile/closure again at runtime. - Ship all three daemon targets and the expected Linux image-pack identity. A macOS controller uses its packaged Linux daemon for Daytona. Image mismatches fail before provider launch. - Use the vendored Runner boundary for installed readiness probes. Verify the actual installed Cursor probe. - Verify compiled public Daytona plugins and their release versions in installed smokes. - Record exact artifacts, the acceptance matrix, retained failures, supported capabilities and rollback behavior in the [readiness report](https://github.com/paperclipai/paperclip/blob/codex/cursor-production-readiness/doc/plans/2026-10-03-cursor-production-readiness.md). ## Verification - Current head `f7ec5cc1f0e30c62a829c016ff2013a2a9d79037` merges mainline `faa8e452c73bae5e044dd6379179a00106abb131`. It keeps Cursor plan and cancellation guards alongside mainline historical-question filtering. The evaluation catalog includes both Cursor and expanded adapter accounting cases (683 total). Recursive typecheck, full build, 696 lifecycle/recovery tests, 45 fixture tests and fixture typecheck passed. Current-head CI passed: 56 successful checks, one neutral and four skipped. [Complete CI](https://github.com/paperclipai/paperclip/actions/runs/37557996535). The fresh Base Greptile review is 5/5 on this exact head, with 304 files reviewed, zero new comments and zero unresolved threads. The user authorized overriding the CODEOWNER review gate after checks passed; no failing checks are overridden. Prior results below retain their own head identities. - Corrective head `3d2b168366258036f6b6a6fccb382c49138cc601` fixes the post-merge Apex finding. Automatic-review and new-evidence reconciliation preserve pending child results and recheck delivery under the status lock before completing. Account repair now excludes unrelated secret consumers and requires the failed agent's identity. Regression coverage includes the commit race, delivery statuses, current-run/current-intent exclusions, repeated reconciliation, both database reconciliation paths, and credential consumer boundaries. All 184 affected tests, server typecheck and server build passed. Current-head Base Greptile review is 5/5, with 304 files reviewed, zero new comments and zero unresolved threads. Current-head CI passed: 56 successful checks, one neutral and four skipped. [Complete CI](https://github.com/paperclipai/paperclip/actions/runs/37535994724). This Base review is distinct from the earlier Apex review. - Merge head `5957c257a` reconciles mainline `b508a05c4`. It preserves both accepted-plan waits and pending-child-completion checks, current provider selectors, task-creation response identities, and mainline ACPX missing-file handling. The combined patch is bound to Cursor profile v14; historical records keep their original identities. - Merge head `5957c257a` passed recursive typecheck, full build, 43 installed ACPX/package contracts, 107 provider UI and plan/recovery tests, 593 database-backed lifecycle tests, 49 profile/native contract tests, 45 Product E2E fixture tests, fixture typecheck, token gates, three provider-free browser task-creation cases, and Runner conformance/replay checks. Its complete CI passed (55 successful checks, one neutral and four skipped), while Apex returned 2/5 with a child-delivery finding addressed below. - The local full-suite attempt again failed the unchanged Git streaming test (360-second timeout) and was stopped. The concurrent local Rust attempt failed four unchanged Codex process/deadline tests; all four passed serially without code changes in 7.29 seconds after removing the competing test load. These failed commands are retained and are not reported as full-suite passes; the fresh Linux CI runs are tracked separately. - The previous head `907bdb2a2778c7ffeb4a662a91460c9d1ddfc9c5` earned Apex 5/5 with zero comments after fixing all three findings: per-user install cache, stale release-pack rejection, and public Linux smoke account/home handling. Its real built installer passed from read-only public packages on macOS ARM64 and Linux x64. All 137 release-registry checks and 64 ACPX package contracts passed. That review does not cover this mainline reconciliation. - Prior `beadd3654` passed the full CI matrix; its one unchanged chat test failure and successful single retry remain in the [CI history](https://github.com/paperclipai/paperclip/actions/runs/37521449327). Historical results below remain attributed to their original builds. - Fixture follow-up `dd59d7e82b103a88b7cbd7d2c38b612c0fbbff7a` removes provider-specific model choices from generic offline ACPX tests. The fake sidecar preserves the model and session identity selected at open through suspension. Affected verification passed: 106 Rust tests and 73 TypeScript tests. This commit changes test code only; the production-code checks below retain their recorded identities. Its CI and Greptile review later passed; those results belong to that historical head. - Model-selection cleanup `9a070808b48960a41fdfd369ae0636b95af82459`: 252 focused Runner tests passed (six platform skips), covering all six ACPX agents, native model acknowledgement, rejected selections, installation integrity and recovery identity. The merged branch passed recursive typecheck, full build, token gates, server admission (19 tests), and the Product E2E catalog (45 tests). The acceptance catalog passed all four tests. The full Rust suite passed: 643 tests, 2 ignored. It verifies sidecar acknowledgement of unlisted models and rejection of model mismatches. The final commits only update Rust tests; production sources match the verified build at `65ec3279ac50185e3cda109b5cfd9b4f56105de0`. No new paid provider calls were made. - The merge preserves both Cursor and the new mainline public-MCP fixture cases. Auto-merge remains disabled; the latest follow-up status is recorded above. The local `pnpm test:run` attempt hit the unchanged Git streaming test's 300-second timeout and was interrupted before merging mainline. The broad Runner attempt found obsolete single-model assertions plus three macOS fixture-path failures caused by a `/private/tmp` override. The assertions are corrected; affected TypeScript checks passed with the standard macOS temporary directory, and the complete Rust suite passed. Neither interrupted command is a full-suite pass. - Earlier declaration-cleanup head `6f4a5e9e2` passed recursive typecheck, build, Rust and focused tests. Its CI later exposed a test expecting duplicated Grok digest literals. The current source fixes that assertion to compare launcher bytes with the shared manifest. Historical successes and failed attempts are retained; no new live provider qualification is claimed. - Previous head `e75fde6098b0ddd8cec765bfb6ecaeecb88a26a6` passed complete CI (56 successful checks, one neutral, four skipped) and Greptile 5/5. [Historical complete CI](https://github.com/paperclipai/paperclip/actions/runs/37489112305). Those results are not claimed for the cleanup head. - Frozen live application: `d7b696f9b8f79095233e9e3d56d23e6a6018dd48`. Public package version: `0.0.0-cursor-verify.3d0c9b7761c6`. The declaration cleanup preserves release pins and does not relabel that tested artifact as a build of the new source. Mainline through `e34abee670` was reconciled while preserving accepted-plan waits, provider-capacity handling, and both Cursor and public-MCP fixtures. - Clean normal installation, explicit Cursor setup and daemon resolution passed on macOS ARM64, macOS x64 under Rosetta, and Linux x64. npm lifecycle hooks ran without silently downloading Cursor. - Historical v11 live matrix: **18/18 passed with cleanup** (nine local, nine Daytona) after the generic mode and lifecycle cleanup. The campaign has 23 attempts; all five failures and their diagnoses remain recorded. Exact case identities, hashes and limits are in the readiness report. All provider calls are real, use the explicit Luna model and company-bound credentials, and run without qualification or runtime-asset overrides. - The immutable Daytona image is `ghcr.io/paperclipai/paperclip-daytona-runner@sha256:d6259b6bba094702c13fc2283bd85550849c1c53145b656fb2746778f9fa1747`. The public Daytona plugin is installed independently and its version is checked. - Recursive typecheck, full build, token gates and Runner contract/conformance/replay checks passed on the frozen application. Its complete Linux CI suite passed. The duplicate local full-suite command was incomplete after timing failures; affected repeats passed, but that command is not reported as a clean pass. - Qualification fixtures passed typecheck, 1,675 Vitest tests (one skip), 128 Node checks, three provider-free browser tests, and 150 focused lifecycle tests after the final diagnostic correction. The affected legacy Cursor command file also passed all five tests after removing its shorter 10-second override; it now inherits the suite’s standard 15-second timeout. Greptile is 5/5 on `e75fde609` with no unresolved review threads. CI results above are recorded separately from historical build results. ## Risks - Cursor v14 includes the updated ACPX dependency patch and release identity. The v11 live matrix and image below remain historical evidence. They do not certify new v14 package/image artifacts. - ACPX accepts models beyond the qualification fixtures. Availability and entitlement depend on the provider. Successful configuration is not a claim of live qualification for every model. - Shared mode is an opaque identifier. Provider adapters own its meaning. Incompatible historical sessions remain fenced; exact committed plan waits and task history remain inspectable. - Native AskQuestion is excluded. Paperclip semantic questions are supported. Authoritative per-run dollar accounting is unavailable; partial counters remain diagnostics and unknown cost is not zero. - Image input, detailed native diffs, deeper child transcripts and native plan-file export remain follow-ups. - macOS x64 has clean-install and daemon-startup proof under Rosetta, not a separate live campaign on Intel hardware. - Release only the tested package/image combination. Merging this PR does not publish npm packages or deploy that image. Later builds need their own release verification. Rollback disables new Cursor admission while preserving records and recovery inspection. - A model can fail an exact instruction: one cancelled-plan attempt returned the wrong summary marker despite correct cancellation. The unchanged repeat passed; both results remain in the report. > ROADMAP.md was checked. This completes existing native Runner/Cursor work; it does not add an independent core feature proposal. ## Model Used OpenAI Codex, GPT-6. The exact serving variant and context window are not exposed in this session. The agent used reasoning, repository inspection, code execution, protocol tests and browser-backed Product E2E tools. Cursor acceptance uses the explicit `gpt-5.6-luna[context=272k,reasoning=medium,fast=false]` model. That is the evaluated provider model. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass — affected suites passed; full CI and the retained local failed attempts are recorded separately above. - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green — 56 successful checks, one neutral and four skipped on `f7ec5cc1f0e30c62a829c016ff2013a2a9d79037` - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups — fresh Base review passed on `f7ec5cc1f0e30c62a829c016ff2013a2a9d79037`; zero new comments and no unresolved threads. The earlier Apex finding remains fixed. - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-06 20:48:15 -05:00
DottaandPaperclip	faa8e452c7	fix(tasks): stop repeated reminders for historical questions (#15392) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Task questions remain saved so a person can answer them later. > - The composer moves an old question into history after a newer human message. > - Native completion still treated every pending question as a required response. > - This caused agents to demand an old answer after the person moved work forward. > - This pull request shares the historical-question rule across context and task execution. > - Agents can finish verified work while the original question remains answerable. ## Linked Issues or Issue Description Refs #15229, Refs #14613, Refs #13130. **What happened?** An agent repeatedly asked a person to answer a question that had moved into feed history. Completion feedback explicitly told the agent to request a response. The saved pending row also blocked task completion. **Expected behavior** A question before newer human direction remains answerable in the feed. Its pending state alone must not require another reminder or stop completed work. A new input blocker, an approval, or a configured review stage must keep its gate. **Steps to reproduce** 1. Let a task agent create an ordinary question. 2. Dismiss the question and send a newer task message. 3. Let the agent finish the requested work and submit its completion report. 4. Observe a demand to answer the old question and a retained completion gate. ## What Changed - Add one company-scoped predicate for historical questions. Only later human comments count. Exclude agent attribution, run attribution, system notices, and untrusted source data. - Apply the predicate to completion feedback, native waits, finalization, commit validation, retry validation, blocked routing, and successful-run handoff. - Include question classification and guidance in heartbeat context and both native task-context tools. Add the guidance to fresh and resumed task prompts. - Replace automatic reminders for current ordinary questions with instructions to assess the real blocker, continue independent work, and withdraw obsolete questions through the existing API. - Preserve historical question rows during completion while cancelling their live native source runs through the existing post-commit and recovery paths. Let an authorized human answer them after completion without reopening work or creating a response wake. Preserve cancellation, current-input, approval, permission, credential, connection, and review gates. Add no dismissal storage or migration. - Document the rule in the execution contract and agent skill. Refresh generated capability source anchors. Add database-backed status, context, attribution, and governance regression tests. ## Verification - `pnpm build` passed. The server rebuild also passed after the lifecycle fix. Generated capability contract and inventory checks passed after the agent documentation update. - `pnpm -r typecheck` passed. Final `pnpm --filter @paperclipai/server exec tsc --noEmit` also passed after the last test additions. - Lifecycle and interaction regressions passed: 224 tests in 3 suites. Context and prompt tests also passed. Final historical-question cases passed (33 tests), native cancellation/recovery cases passed (6 tests), and the existing interaction/confirmation suites passed (72 tests). The full local `pnpm test:run` was attempted and stopped after more than two hours with unrelated fixture/hook timeout failures; it did not pass. All 52 successful GitHub checks are green on the latest commit, including the complete test matrix; no checks are pending or failing. Greptile is 5/5 and both review threads are resolved. - Regression cases cover the old-question/new-human-message sequence, final task status, answering after completion with no wake, live-run cancellation and crash recovery, current input blockers, both task-context tools, API context, timestamp precision, attribution boundaries, and protected gates. ## Risks - A later human task message makes an earlier ordinary question historical even if its input is still missing. The agent must identify the current blocker and ask only for information that still prevents work. - Browser dismissal remains a local preference. Dismissal without a later human message is not recorded by this change. - No schema change or data migration. Completion retains ordinary historical questions; cancellation still expires them. A completed task accepts historical answers only from an authorized human and creates no response-delivery outbox row. Governed requests retain their gates. ## Model Used OpenAI Codex, GPT-6, with repository editing, code execution, and browser diagnostics. The exact deployment model ID and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-06 20:33:13 -05:00
DottaandPaperclip	1be3f69703	Merge master and reconcile Dot with the released MCP gateway ... Reuse scoped browser and device consent, verified client metadata, signed event admissions and warm-standby gates. Preserve the dedicated agent resource and Runner authority. Regenerate the Dot-only migration after the merged gateway history and cover issuer, company, viewer and token isolation. Co-Authored-By: Paperclip <noreply@paperclip.ing>	2026-10-06 17:47:24 -05:00
DottaandPaperclip	a590ab769d	Give managed agents persistent cryptographic identities (#15352) ... Give agents persistent Ed25519 identities encrypted with the existing instance master key. Create keys transactionally for new agents and lazily before supported managed runs, expose public identities in the API and agent UI, and protect private material during runtime delivery and output persistence. Preserve identities in recovery backups while giving imported and development-cloned agents fresh keys. Co-Authored-By: Paperclip <noreply@paperclip.ing>	2026-10-06 13:57:03 -05:00
DottaandPaperclip	63f3aa2dbf	fix(runner): continue restart-interrupted Codex turns (#15297) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Native runs retain their provider conversation across server restarts. > - A dead runner can restore a Codex conversation after its active turn is lost. > - The old recovery path synthesized a failed task result from that interruption. > - The task then required operator action even though its conversation and workspace were available. > - This pull request preserves the interruption cause and uses the admitted restart attempt for one continuation in the same conversation. > - The agent can reconcile unfinished actions and complete the current request without resending the original task. ## Linked Issues or Issue Description Related: #12845 added native restart recovery. #15042 covers admission during shutdown. #14796 covers legacy shutdown recovery. This change covers a lost native Codex turn after successful conversation restoration. **What happened?** After a server restart killed the local runner, Paperclip restored the saved Codex thread. Runnerd found that the old turn was no longer active. It synthesized a failed terminal and a needs-review result from the last progress message. The transport also discarded the terminal error when it reconstructed thread history. The task failed instead of continuing. **Expected behavior** After proving that the old process stopped and admitting a bounded recovery attempt, resume the current request in the same conversation. Preserve the workspace. Inspect unfinished actions before proceeding. Keep real provider failures, accepted results, intentional stops, unknown unreconciled effects, and exhausted attempts subject to their existing rules. **Steps to reproduce** 1. Start a local native Codex run and leave its turn active. 2. Kill the isolated runner and provider processes, as can happen during a server restart. 3. Restore the same provider thread with no active turn. 4. Observe the synthetic task failure. The new real-process regression reproduces this boundary with a scripted provider. ## What Changed - Record an explicit recoverable process-loss cause without inventing a task result. - Preserve terminal errors and prior turns in reconstructed provider history. Recover the authoritative saved result when adopting an accepted continuation. - Send one continuation in the same conversation for an admitted dead-runner recovery. Require reconciliation of unfinished commands and external actions. - Persist the interrupted terminal before submission and retain the existing recovery marker across another controller loss. - Keep provider attempt limits, terminal failures, and intentional cancellation behavior. - Add red/green regressions, real process-kill coverage, restart checkpoint coverage, and retry-budget coverage. Document the behavior and run-log evidence. ## Verification - Red: the new native runtime regression rejected with `NativeProviderTerminalFailure` on the original code; the Rust restore regression found a missing recovery cause. - Red/green: if restoring the conversation fails and replacement is allowed, the replacement receives the full task and fresh-session handoff. Both prepared and legacy execution inputs are covered. - Red: a second controller crash after the provider accepted the continuation caused an extra `turn/start`. The regression now proves there are exactly two submissions total: the original and its continuation. - Green: focused runtime, backend, driver recovery, and real-process restart suites (207 tests). After the final history/result changes, driver recovery and real-process restart suites passed again (36 tests). - Green: complete Codex transport suite (186 tests), server restart classification/database integration suites (34 tests), and Rust Codex provider suite (92 passed, 2 ignored). - Full `pnpm -r typecheck` and `pnpm build` passed on `60141e649`. The subsequent replacement-prompt guard passed the Runner TypeScript check and the complete runtime plus process-restart suites (148 tests). - Local full-suite attempt: `pnpm test:run` reported two failures in the untouched chat integration suite. Both passed individually, and the complete chat suite passed on rerun (1,063 tests). After all remote test shards passed, the duplicate serial local run was stopped with SIGINT; it is not claimed as a full local-suite pass. - Latest-head CI (`b1297dcd4`): 55 successful checks and 4 intentionally skipped checks, including all test shards, typecheck, build, native Runner verification, end-to-end tests, and canary dry run. [CI run](https://github.com/paperclipai/paperclip/actions/runs/37405346303). - Greptile: 5/5 on the latest head, with no unresolved review threads. The PR is mergeable. - The process tests use the real runner binary and a scripted Codex provider. They do not call a live model service. ## Risks - This changes local Codex recovery after process loss. A continuation can execute more work in the retained conversation. Its prompt requires state inspection before repeating an uncertain action; the system does not replay tool calls. - Recovery shares the existing three-attempt budget and one-shot continuation marker. Real failures and older unmarked failed checkpoints are not reopened. - No database migration or API change is required. ## Model Used - OpenAI Codex, based on GPT-6. The exact model ID and context-window size are not exposed in this session. - Capabilities: reasoning, source inspection, tool use, code editing, code execution, and test analysis. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-06 07:49:47 -05:00
Devin FoleyandPaperclip	1d5a439e2b	Diagnose native model rejections and preserve repairable reviews (#15304) ... ## Thinking Path > - Paperclip manages agent execution and recovery. > - A native provider can return a failed turn with an accepted result. > - This path replaced a structured model rejection with a generic failure. > - Finalization could also queue the same failed request for recovery. > - This change retains a bounded model and authentication diagnosis. > - Workers wait for a configuration fix; reviews retain their assignment. ## Linked Issues or Issue Description **Describe the bug** A native Codex turn can report HTTP 400 because the selected model is not supported by its ChatGPT connection. When the turn also returns a failed semantic result, the run shows `Native session failed` and `adapter_failed`. The native failed-result finalizer can create a retry intent before the adapter error is saved. **To Reproduce** Use a native Codex session that returns a structured `invalid_request_error` model/ChatGPT rejection and an accepted failed result. The regression tests reproduce this with a stub provider and a real isolated PostgreSQL database. No provider account or live request is needed. **Expected behavior** Show an actionable error and stop automatic retries of the rejected request. Block the current worker for a configuration fix. Preserve a pending review so its reviewer can explicitly retry after repair and resolve the original assignment. A stale run must not block a new task owner or override a completed review. **Version and deployment mode** The affected source path is present at `858094ba81`. This change applies to native Codex execution in local and remote environments. Related work: #13853 covers CLI protocol compatibility, #14942 refreshes runtime/model pins, and #12767 proposes legacy adapter model validation. This change concerns accepted native failed results and does not replace those changes. ## What Changed - Recognize only a bounded structured HTTP 400 provider error for the exact selected model and failed turn. - Save a fixed actionable error and four fixed diagnostic fields. Exclude raw provider text and model names from the new diagnostic. - Re-derive finalization evidence from the pinned execution and committed runner event, including its canonical hash and identity bindings. - Block only the current worker. For a current pending reviewer, preserve the original review decision and status version, release execution, and create no automatic recovery action. Recheck execution ownership under the issue lock. Preserve superseded and completed reviews. - Keep unknown failures, accepted results, cleanup, and ownership fences intact. Advance the status policy version to `phase6-v8`. - Route this exact failure code through the existing configuration recovery path. Permit an authenticated Board retry of this native failure only for its saved, still-pending review; discard caller review markers and revalidate at dispatch. ## Verification - Node 24: `pnpm -r typecheck` and `pnpm build` passed. - Independent focused validation: 222 tests passed across the new observer and PostgreSQL integration suites, status arbiter, diagnostic redaction, recovery classification, wake policy, and wake use cases. - The integration tests use actual result persistence, finalization, and the wake dispatcher. They cover zero retry dispatch for an authorized rejection, repeated reconciliation, pending/superseded/resolved reviews, reassignment, and a same-agent successor at an unchanged status version. - Final-commit verification: full typecheck and build passed; independent route/integration/arbiter/review validation passed 136 tests with no remaining source findings. This includes authenticated retry refusals, actual heartbeat retry admission, atomic queued-review claim, and acceptance of the original review. - The local aggregate test run was stopped to avoid duplicating the canonical Linux CI aggregate on this development host. Its partial log showed no failures; no full local-suite pass is claimed. The full hosted Linux CI aggregate passed on the final commit. - No live provider calls, runtime changes, or schema changes were made. ## Risks The classifier is intentionally narrow. A changed provider response format remains an unknown failure. No global model restriction is introduced. The worker blocker requires current task authority and does not replace newer assignments or completed review decisions. A pending review remains in review and requires an explicit retry after configuration repair; it is not rebound to a new status decision. The retry decision is durable. There remains a small existing gap between status/effect commit and diagnostic metadata persistence; a crash there can leave a generic diagnostic while preserving the blocked decision. No schema migration is required. ## Model Used OpenAI Codex, GPT-6, with reasoning, tool use, and code execution. The exact serving model suffix and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #123` / `Refs #123` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub references) - [x] My branch name describes the change and contains no internal ticket id or instance-derived details - [x] I have run focused tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-05 20:57:33 -07:00
4 people	6c36c07a4f	feat(adapters): add GPT-6.1 Sol and refresh shared coding harness pins (#14942) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Agents run through coding-agent adapters and the native runner. Both use the same installed provider CLIs, model catalogs, and reasoning controls. > - OpenAI released GPT-6.1 Sol (`gpt-6.1-sol`) in Codex. Anthropic released Claude Sonnet 5.5. The static Codex, Bedrock, and OpenCode catalogs do not list these IDs. > - The shared provider pack pins Codex 0.156.0 and OpenCode 1.18.32. The evaluation image pins older Grok, Gemini, Kimi, Cursor, and GitHub CLI releases. Codex 0.156.0 has no bundled metadata for GPT-6.1 Sol. > - A model entry without a current harness, or a harness pin without its runner integrity checks, fails at run time. > - This pull request adds the verified model IDs and moves the harness pins, executable digests, controller checks, and image pins together. > - The benefit is that operators can select the current models, and the native and local adapters share one current CLI installation. ## Linked Issues or Issue Description Refs #13829 and #13838 (the September 22, 2026 model and harness refresh). Related pull requests: #14993 (merged October 5, 2026, superseding #14816) added the direct Claude Sonnet 5.5 entry and refreshed the Claude runtime to Agent SDK 0.3.286 / Claude Code 2.1.286. This pull request does not change the Claude runtime or the direct Claude model list; it keeps the #14993 pins and adds only the Bedrock Sonnet 5.5 ID. After #14993 merged, this branch was rebased onto `master` (October 5, 2026). The six overlapping pin regions (`docker/daytona-runner/Dockerfile`, `docker/daytona-runner/README.md`, `package.json`, `pnpm-workspace.yaml`, `packages/adapters/claude-local/src/index.test.ts`, `packages/paperclip-runner/src/backends/native-backend-factory.test.ts`) were resolved by keeping this pull request's Codex 0.160.0 and OpenCode 1.18.34 pins next to #14993's Claude 0.3.286 / 2.1.286 pins, taking the union of the Sonnet 5.5 model IDs in the Claude test, and merging both README paragraphs. The Sonnet 5.5 effort and CLI-gate lines in the Claude adapter were identical in both pull requests and merged without a diff. #14917 and #14918 reordered the Claude and Codex model lists earlier; the new entries sit where those ordering rules put them. Sources checked on 2026-10-02: - [OpenAI Codex models](https://learn.chatgpt.com/docs/models): GPT-6.1 Sol uses `gpt-6.1-sol`, supports reasoning efforts from Light to Ultra, and has Standard and Fast modes at launch. The page also records that `gpt-5.4` and `gpt-5.4-mini` retired from Codex with ChatGPT sign-in on August 31, 2026, and that `gpt-5.5` retires on October 14, 2026. Neither retirement applies to the OpenAI API. - [Codex CLI releases](https://github.com/openai/codex/releases) 0.157.0 through 0.160.0. The bundled model metadata in the 0.160.0 Linux binary contains `gpt-6.1-sol`. - [Claude Sonnet 5.5](https://platform.claude.com/docs/en/models/sonnet-5-5/overview): Bedrock ID `anthropic.claude-sonnet-5-5`, released September 28, 2026. - [OpenCode releases](https://github.com/anomalyco/opencode/releases) 1.18.33 and 1.18.34 (fixes only). The OpenCode model registry lists both added provider-qualified IDs. - npm `latest` tags for `@xai-official/grok` 1.0.46, `@google/gemini-cli` 0.62.0, and `@moonshot-ai/kimi-code` 2.1.1. [xAI](https://docs.x.ai/docs/models), [Google](https://ai.google.dev/gemini-api/docs/models), and [Kimi](https://www.kimi.com/code/docs/en/kimi-code/models.html) list no newer coding models. - Cursor CLI 2026.10.01-e373342 is the version the official installer resolves. The pinned digest is the SHA-256 of the versioned Linux x64 archive. - [GitHub CLI 2.102.0](https://github.com/cli/cli/releases/tag/v2.102.0) (security fixes). The pinned digest matches the release `checksums.txt`. ## What Changed - Codex adapter: add `gpt-6.1-sol` to the model list, the Fast mode list, and the Ultra effort set. It is the first entry: #14918 orders the list newest version first, and its description notes the ChatGPT app lists GPT-6.1 Sol first. Update the adapter documentation text. - Claude adapter: add `us.anthropic.claude-sonnet-5-5` (Bedrock Sonnet 5.5) to the Bedrock catalog in the newest-Sonnet slot after Opus 5.5; `us.anthropic.claude-sonnet-5` moves into the older-Sonnet group, matching what `sortClaudeModels` from #14917 produces at runtime. Any Sonnet 5.5 ID (direct or Bedrock-qualified) now gets the documented `xhigh` and `max` efforts and requires Claude Code 2.1.284 or later on the CLI lane (the Claude Code changelog entry for 2.1.284 adds `claude-sonnet-5-5`). These two lines are identical to the ones #14993 merged, so the branch carries no diff for them. - OpenCode adapter: add `openai/gpt-6.1-sol` and `anthropic/claude-sonnet-5-5` to the static fallback catalog. - Codex runtime pin 0.156.0 → 0.160.0 in the root and workspace overrides, the runner package, the Codex ACP package patch, the qualified ACPX profiles, the Linux x64 executable digest, the Rust provider backend and its tests, the provider-pack manifest pins, the remote controller pins, the sandbox npm install spec, and the opt-in qualification scripts. - Remote Codex compatibility window: upper bound 0.157.0 → 0.161.0. The minimum stays at 0.149.0. - OpenCode runtime pin 1.18.32 → 1.18.34 in the runner package, the materialization script, the server and Rust qualified versions, the eval and live-session labels, fixtures, and the configuration label. - Evaluation image (`docker/daytona-runner/Dockerfile`): Grok CLI 1.0.46, Gemini CLI 0.62.0, Kimi Code 2.1.1, Cursor CLI 2026.10.01-e373342 with its digest, GitHub CLI 2.102.0 with its digest, Codex and OpenCode version probes, and the refreshed lockfile digest. The Claude Code 2.1.286 probe comes from #14993 and is unchanged here. - `pnpm-lock.yaml` is not part of this pull request. The repository's pull request gate rejects lockfile edits, and the refresh bot regenerates the lockfile on master (the same flow #13838 used). The Dockerfile `PAPERCLIP_RUNNER_LOCK_SHA256` default is the digest of the lockfile that `pnpm install --resolution-only --ignore-scripts --no-frozen-lockfile` (the refresh workflow's command) produces for the combined pins on the rebased branch (`e1856797…`); that lockfile differs from master only in the `@openai/codex` 0.160.0 platform packages, the `@anthropic-ai/claude-agent-sdk` 0.3.286 override that #14993 introduced (the open refresh-bot pull request #14872 carries that part), `opencode-ai` 1.18.34 with its Linux x64 baseline, and the `codex-acp` patch hash. - Documentation: runner README, runner compatibility doc, environment variable example, and a new `doc/adapter-model-audit-2026-10-02.md` with sources and deferred items. - Tests: Codex adapter catalog, server adapter models, Codex compatibility window, native session executor pins, runner package contract, OpenCode materialization, and UI effort options. Unchanged on purpose: Claude Agent SDK 0.3.286 / Claude Code 2.1.286 (already on `master` from #14993), ACP bridges (`acpx` 0.13.1, `claude-agent-acp` 0.73.0, `codex-acp` 1.6.2; newer upstream releases need a separate qualification), the native Grok runtime 1.0.13, Pi 0.84.2 / 0.87.1 (the Pi 1.0 runner stack covers it), and Hermes 0.19.0 (current). `gpt-5.4` and `gpt-5.4-mini` stay in the picker because the OpenAI API still serves them. ## Verification Run on Linux x64 with Node 25.9.0 and pnpm 9.15.4 after `pnpm install --no-frozen-lockfile` (the refreshed lockfile stays local; see above). The results below were re-run on the rebased head (October 5, 2026) for the suites the conflict resolution touches; the other rows are from the original run and are covered by CI on every push: - Rebased head: `packages/adapters/codex-local` 482 passed; `packages/adapters/claude-local` 340 passed, 4 failed (`execute.remote`, `test.probe`, `execute.acp-fallback`, `acp` spawn/env-hardening cases that fail identically on unchanged `master` in this host environment); `server` adapter-models + codex-runtime-compatibility + native-session-executor + adapter-registry 607 passed, 1 failed (the same adapter-registry override-pause case as before, also failing on `master` here); `packages/paperclip-runner` native-backend-factory + qualified-profiles 36 passed; `ui` codex-reasoning-effort + config-fields + model-utils 19 passed. Rust, full typecheck, build, and the Docker image are left to CI as before. - `vitest run` in `packages/adapters/codex-local`: 13 passed. `vitest run` in `packages/adapters/claude-local` (whole package, including the new Sonnet 5.5 gate and effort tests): see the latest CI run and the comment below. `vitest run` in `packages/adapters/opencode-local`: 48 passed, 1 failed (`runtime-config.test.ts` reads the host `PAPERCLIP_OPENCODE_PROVIDERS` variable; it fails the same way on the unchanged base). - `vitest run src/__tests__/adapter-models.test.ts src/services/native-runtime/codex-runtime-compatibility.test.ts src/__tests__/adapter-registry.test.ts` in `server`: 84 passed, 1 failed (`adapter-registry.test.ts` override pause test; it fails the same way on the unchanged base). - `vitest run` in `ui` for `codex-reasoning-effort`, `agent-setup-fields`, `config-fields`, and `ComposerRunSettingsPicker`: 25 passed. - `node --test test/acpx-codex-package-contract.test.mjs scripts/materialize-opencode-binary.test.mjs scripts/runner-protocol-eval-campaign.test.mjs` in `packages/paperclip-runner`: 23 passed. The package contract test verifies the installed Codex ACP executable digest and the 0.160.0 patch pin. - `vitest run src/drivers/acpx src/backends src/drivers/opencode src/live/live-session.test.ts` in `packages/paperclip-runner`: 626 passed, 5 failed, 1 skipped. The 5 failures (`installation-integrity.test.ts` `/proc/self/fd` module loading and one OpenCode answer-selection test) also fail on the unchanged base under Node 25; Linux CI runs Node 24. - `pnpm run test:opencode:qualification` in `packages/paperclip-runner` against the installed OpenCode 1.18.34 executable: passed. - `codex --version` from the installed pack prints `codex-cli 0.160.0`. The Linux x64 executable digest `12eb3e81…652aad` was computed from the `@openai/codex@0.160.0-linux-x64` archive after checking its registry `dist.integrity`. - `pnpm check:token-gates`: all gates clean. - `pnpm run typecheck:typescript` in `packages/paperclip-runner`: passed. Package typechecks ran one at a time; see the comment below for the server and UI results. Not run here, and needed from CI: - Rust tests and `pnpm -r typecheck` / `pnpm build` for the server (no `cargo` in this environment; the server typecheck prepares the runner vendor build). - The Docker evaluation image build and the real-binary Codex startup and session-resume probes (no Docker; the probes need the compiled `paperclip-runnerd`). The trusted CI runner workflow covers them. - Authenticated inference with any new model. This change is metadata and startup validation only. ## Risks - Codex 0.160.0 changes the bundled model catalog and app-server behaviour (authoritative provider catalogs, incremental running-turn tracking). The patched `codex-acp` 1.6.2 bridge is unchanged and declares `^0.148.0`; it worked with 0.156.0 under the same override. If CI probes show a protocol change, the pin can return to 0.156.0 by reverting this pull request. - The compatibility window upper bound moves to `<0.161.0`. Remote images with Codex 0.157 to 0.160 become accepted. Older images stay accepted down to 0.149.0. - Until the refresh bot lands the regenerated lockfile on master, the Dockerfile lockfile digest default does not match the committed lockfile. The trusted CI workflow computes the digest from its own resolution at build time, so this affects only a local build that passes no digest. - Existing saved model selections and effort settings are not changed. Agents on `gpt-5.4` or `gpt-5.5` with ChatGPT sign-in need a model change before the OpenAI retirement dates; that is documented, not enforced. - Rollout order: deploy the controller and runner from this change before promoting a sandbox image that carries these pins. Older controllers reject the new provider-pack pins. ## Model Used - Claude Fable 5.1 (Anthropic, model ID `claude-fable-5-1`), 1M context window, adaptive thinking, tool use. The model ran as a Paperclip agent through the Claude Code harness, performed the web research, edited the code, and ran the tests listed above. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Bender (Fable) <noreply@paperclip.ing> Co-authored-by: devinfoley <139239+devinfoley@users.noreply.github.com> Co-authored-by: Claude Fable 5.1 <noreply@anthropic.com>	2026-10-05 13:59:08 -07:00
DottaandPaperclip	a65ca09508	fix(runner): settle accepted results after shutdown failures (#15217) ... ## Thinking Path > - Paperclip manages AI agents and the tasks they perform. > - The native runner saves tool results and completion reports before it releases a session. > - Large project discovery responses can exceed the durable command limit. > - A shutdown failure can leave a saved answer waiting for workspace repair. > - Recovery reused the old assessment for a different status decision, which violated a database constraint. > - This pull request bounds discovery responses and lets recovery commit the saved result after workspace repair. > - The benefit is a task that reaches its correct final status without another provider turn. ## Linked Issues or Issue Description **What happened?** A native run can save its final answer, fail during shutdown, and leave the task In Progress after workspace repair succeeds. Reconciliation tries to reuse the failed-workspace assessment for a new decision. The one-decision-per-assessment constraint rejects the write. Replaying the old decision can also retain a fresh coordinator lease. Separately, retained session cleanup only recognizes the old `adapter_failed` label. The project-list tool returns full project records, including large descriptions and workspace configuration. A large response exceeds the runner's durable command limit. The settlement diagnostic previously recorded only a failure flag. **Expected behavior** Project discovery stays within the command limit. Recovery finishes the saved result after workspace repair, releases its lease, and preserves the original error for inspection. It does not repeat provider work or relax session ownership checks. **Steps to reproduce** 1. Return large project records from `list_projects` and observe an oversized semantic result. 2. Persist an accepted native completion result, then record a shutdown failure. 3. Finalize with a failed workspace, repeat that attempt, then record successful workspace repair. 4. Reconcile the run. Before this fix, the issue stays In Progress. **Paperclip version or commit** Reproduced on `a386a599983519eb1d399f8b770bfccdb2a74762`. **Deployment mode** Self-hosted server with Paperclip Runner. Related transport work: #12208 drains queued events; #12241 resumes interrupted semantic calls. This change addresses bounded project discovery and accepted-result finalization. ## What Changed - Read bounded project summary projections from the database and return at most 50 authorized summaries with a continuation cursor and explicit description truncation. Agent and run trust boundaries narrow the database candidates; project-specific policies still receive full authorization. Only visible projects determine continuations. The default project-list API remains unchanged. - Record bounded, content-free settlement failure causes for command limits, storage errors, and rejected dispatch. - Include workspace state in assessment identity. Preserve the initial assessment for interrupted finalization, and commit replacement assessment and decision references together. - Release the coordinator lease when an existing decision is replayed, without repeating its effects. - Clear stale errors when recovery succeeds and retain them in `recoveredExecutionFailure`. - Accept both current and legacy close-failure labels in the existing exact-state cleanup path. - Add regression tests and update the tool contracts and recovery documentation. ## Verification - Red: the new project paging, settlement diagnostic, current cleanup label, and repaired-workspace regressions failed on the original implementation. - Green: protocol/catalog/tool checks (117 tests), the full project-tool and finalizer suites (47 tests), cleanup ownership cases (70 tests), and cleanup sweep cases (4 tests) pass. Database-backed pagination covers large descriptions/configuration, complete enumeration, uppercase cursors, agent/run restrictions, project-policy scope contributions, and identical results/cursors when hidden projects are added. - The initial CI failures in interrupted Board waits, contended endpoint proof, and semantic schema validation were reproduced and fixed; all affected cases pass locally. - `pnpm -r typecheck` — passed. - `pnpm build` — passed. - `pnpm test:run` — started before the review corrections; it spanned several source revisions and was stopped after reporting old-behavior and timing failures. It is not claimed green. Fresh project and recovery suites pass; the recovery suite also passes all 25 cases with the broad runner’s isolated home/config. The Slack timing case passed in isolation. Latest-head CI is the authoritative complete test matrix. - Existing authorization suite — 66 tests passed. - Latest-head CI on `8e5763d915aa6f375bdab6601996899ea01496fc` — 55 checks passed, 4 intentionally skipped, no pending or failing checks. - Greptile — 5/5, zero unresolved threads on the same commit. - `git diff --check` — passed. ## Risks - `list_projects` now returns summaries. Callers must follow `nextCursor` and use the authorized project API for full records. Candidate narrowing is only an optimization: project policy and responsible-user authorization remain authoritative. - Assessment identity changes for workspace finalization. Existing evidence remains intact; no migration is needed. - Cleanup still requires matching identities, settled tool evidence, and verified process ownership. Unknown tool outcomes remain blocked from session reuse. ## Model Used OpenAI Codex, based on GPT-6, with reasoning, code execution, and GitHub tools. The exact serving model ID and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-05 10:31:11 -05:00
Dotta	bc1220336d	feat(runner): add experimental two-way OpenAI Dot provider	2026-10-03 00:32:25 -05:00
DottaandPaperclip	cc67d4e1d8	fix: preserve steering and recover stopped task conversations (#15015) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - A task conversation must let a user guide a running agent and resume stopped work. > - The active run owns its input protocol, even when the user changes the next model or effort. > - Queue delivery waits for a provider receipt, which must be able to persist during the request. > - A stopped startup also needs a clear user action that passes normal task admission. > - This pull request fixes steering delivery, makes queue actions immediate, and restores explicit continuation. > - The benefit is a responsive conversation that can recover without losing saved input. ## Linked Issues or Issue Description **What happened?** A queued message could change from Steer to Interrupt while a native run prepared. A steer request could wait on its own database lock and fail to deliver. A stopped startup could then leave the conversation without a working Retry or message continuation. Interrupt also waited for the server and showed a toast. **Expected behavior** The active run keeps its input protocol. Steer delivers input to that run. Steer and Interrupt clear the submitted queue rows and show the input in the conversation immediately. Failed delivery restores the latest queue with an inline error. An eligible stopped run offers Retry, and authenticated user input can start a fresh turn through normal task admission. **Steps to reproduce** 1. Start a task with a native Paperclip Runner. 2. Change the selected model or effort while that run prepares. 3. Queue a message and press Steer. 4. Observe the provider receipt and queue state during the request. 5. Stop a startup before its provider process begins, then try Retry or send a new message. 6. Repeat queued delivery with a legacy runner and press Interrupt. **Paperclip version or commit** Reproduced on the parent of this branch, `59c07ede7`. **Deployment mode** Authenticated private deployment. The fixes also cover local task conversations. Related work: Refs #12834, Refs #13354, Refs #13275. The open refactor in #13160 moves the same queue route; it does not fix the receipt lock or stopped-run continuation addressed here. ## What Changed - Select queue behavior from the active run's immutable dispatch and runtime resolution. - Leave the run row unlocked during provider acknowledgement, then lock and read it before merging the receipt. - Retain queued input if the target run stops during that wait. Keep inline delivery errors visible after empty queue updates. - Permit exact Retry and authenticated continuation after verified native startup cancellation. Preserve pause, approval, budget, ownership, and process-stop gates. - Carry undelivered native queue input into a fresh turn once the old execution is confirmed stopped. - Show Steer and Interrupt input in the conversation and clear submitted composer rows immediately. Restore the latest queue inline on failure. Remove delivery toasts. - Keep optimistic delivery stable across stale polls, empty queues, and paginated history. Preserve classic Interrupt error handling. - Document recovery and optimistic delivery behavior. Add regression tests across server, shared queue projection, and UI boundaries. ## Verification - Red-green regression tests reproduced the queue protocol, receipt lock, stopped-startup continuation, and optimistic delivery failures. - The focused server route, continuation, queue, and runner boundary suites passed during implementation. - The queue-route suite passes with 78 tests. The three complete conversation UI suites pass with 347 tests. - UI typecheck, production build, and `pnpm check:token-gates` pass. - Workspace `pnpm -r typecheck` and `pnpm build` pass. The local monolithic `pnpm test:run` is still running; remote CI verifies the complete suite on the latest commit. - All CI gates pass on `bd9031ad56abfcde13d13a13488c1b9217c2fd3a`, including the full test shards, runner verification, browser E2E, typecheck, release registry, and canary dry run. - Greptile reports 5/5 for that commit. Both review threads are resolved. ## Risks This changes queue display and explicit continuation admission. The UI must restore rejected delivery without losing other-session edits. The server must preserve concurrent provider result updates and must not resume a process whose stop is uncertain. Focused tests cover these boundaries. This change has no database migration. ## Model Used OpenAI Codex, an agent based on GPT-6. The exact runtime model ID and context window are not exposed in this session. Used reasoning, repository tools, code execution, and browser inspection. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-02 22:07:14 -05:00
DottaandPaperclip	2ec82c5774	fix(runner): preserve task context when tool connections change (#14963) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Agents use tools through company-scoped connections and provider sessions. > - Resolving a tool connection currently forces a fresh session even when the provider can load new tools into the existing conversation. > - A fresh provider conversation can receive too little history to continue the task. > - This pull request adds explicit tool-refresh capabilities and uses them in both runner paths. > - Fresh attempts receive bounded task history with source IDs and retrieval instructions. > - The benefit is that agents can continue the same task after a connection changes. ## Linked Issues or Issue Description **What happened?** A resolved tool connection forced a fresh provider conversation. The new conversation could lose the original goal and prior answers. Claude also rejected resume when only the MCP server set changed. **Expected behavior** Resume the provider conversation when its harness can refresh tools. When a fresh session is required, supply enough bounded history to continue the task. Preserve company, agent, task, workspace, model, instruction, and skill checks. **Steps to reproduce** 1. Start a conversation and agree on a task and its constraints. 2. Request and connect a tool needed for the task. 3. Continue the conversation after the connection resolves. 4. Check that the agent remembers the task and can use the new tool. **Paperclip version or commit** The bug was reproduced on master at `c46e41e81`. This branch is rebased on current master. **Deployment mode** Self-hosted server. Both legacy adapters and the native runner are affected. Related public work: Refs #13282 for task-backed conversations. Refs #13057 for the broader session-compaction proposal. Refs #14659 for another report about local CLI session continuity. This change fixes tool-connection continuation. Provider authentication repairs keep their existing recovery behavior. ## What Changed - Expose tool-refresh support in native harness descriptors and legacy adapter metadata. - Request tool refresh after connection resolution. Keep provider authentication repair as a fresh-session wake. - Reload current tools and credentials while retaining supported Claude, Codex, Grok, and other provider conversations. - Allow MCP-only changes during qualified native recovery. Keep all other compatibility checks. - Refresh managed-provider and ACPX tool bindings when attaching a new run. - Add a fresh-session handoff for both runner paths. Bound database reads, excerpts, and the final packet to 24,000 bytes. - Include the original request, recent messages, decisions, plans, prior answers, and source IDs. Mark omitted content. Apply reset boundaries, wake cutoffs, quarantine, and secret redaction. - Add regression tests and document the capabilities and handoff behavior. ## Verification - `pnpm -r typecheck` and `pnpm build` passed. Rust formatting passed. - Final review fixes passed 314 server tests, 333 adapter utility tests, 139 native-session runtime tests, and 12 managed-provider Rust tests. They verify historical quarantine, raised budgets across attachment, no history reads on successful resume, and handoff delivery on fresh retry. - Broader branch verification also passed 1,401 adapter utility tests, 1,047 runner TypeScript tests, 43 Grok adapter tests, and 311 Rust core tests. - Live Claude CLI and Grok ACP probes preserved the provider session ID, recalled a prior task constraint, and called a newly added read-only MCP tool. - GitHub CI passed on `b21486d18084a7aa4cafbe8e012f7cad6585d9cc`: 55 successful checks and 4 skipped checks. This includes all test shards, all eight browser shards, runner checks, and the Grok clean public npm install canary. [CI run](https://github.com/paperclipai/paperclip/actions/runs/37057514976). - A full local test attempt encountered a separate Git snapshot timeout. All affected local suites passed after the final edits, and the full CI test gates passed. - Review the capability matrix in `packages/paperclip-runner/README.md`. Repeat the four reproduction steps with a supported provider and with an unsupported harness. ## Risks - Provider tool refresh can fail. Existing recovery falls back to a fresh conversation where policy permits it. - A new transport can replace an old process while preserving the provider conversation. Tests cover current credentials and unchanged identity. - Long history can omit older context. Explicit markers and source IDs let the agent retrieve needed context within task scope. - Unknown and unqualified harnesses use the fresh-session path. No database migration is required. ## Model Used OpenAI Codex, GPT-6, with reasoning, tool use, code execution, and live provider testing. The exact model ID and context-window size are not exposed in this session. Claude and Grok also ran as test subjects. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-02 15:11:44 -05:00
DottaandPaperclip	018993140f	feat: let agents name prompt-only tasks (#14761) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Users create tasks with a title and a description. > - A required title adds work when the prompt already explains the request. > - An agent can name the task once it reads that request. > - This pull request accepts prompt-only tasks and starts them with a short prompt slice. > - A scoped title tool lets the assigned agent replace that slice early without changing execution state. > - A live browser eval checks the real agent call, saved title, audit entry, and preservation of user titles. ## Linked Issues or Issue Description **Subsystem affected** Cross-cutting: task creation, shared contracts, database, server, runner tools, and board UI. **Problem or motivation** Users must currently write a title before they can submit a detailed task prompt. The agent has enough context to write a useful title itself. **Proposed solution** Make the title optional when a description is present. Save the first 120 characters of the normalized prompt as a provisional title. Ask the assigned agent to call `set_task_title` early. Use an atomic provisional-title guard to preserve titles supplied or edited by users. Keep explicit titles supported. Related: #14543 and #14556 concern empty-title submission. This change intentionally enables that submission when a prompt is present, instead of requiring a title. ## What Changed - Add the `titleNeedsGeneration` field with an idempotent migration. Keep existing titles unchanged. - Add `PUT /api/issues/:id/title` and the native and legacy `set_task_title` tool. Enforce company access, active-run ownership, shared, bounded retry receipts across native/HTTP calls, and transactional audit logging. Refresh external-object links after commit, with the same feature gate and plugin detectors as ordinary title edits. - Add early naming guidance in Standard, Ask, and Plan task context. Preserve the description, status, and assignment. - Allow prompt-only root and child task creation, plus draft restoration in the New Task dialog. Keep user titles supported. - Add an opt-in Product E2E suite for prompt-only Standard and Ask tasks, plus an explicit-title control. It checks actual provider calls within the first five tools, persisted state, audit attribution, and the reloaded UI. - Preserve a closed vocabulary of API key maintenance phrases in declared prose while rejecting opaque credential suffixes. Add one bounded naming retry after wording is rejected, without treating the rejected call as a saved title. - Repair the native cleanup receipt check exposed during full verification: accept matching input digests, retain legacy input checks, and reject conflicting receipts. ## Verification - Live Product E2E on `f43478473800e3a46b85c5ee79677efdb15108e7`: **3/3 passed** with native Codex `gpt-5.4-mini`, first attempts only, automatic retries disabled. Standard and Ask each saved “Rotate expired API key” on their first tool call, with matching persisted state and a single same-run audit entry. The explicit-title control retained its user title with zero title writes. All three verified the reloaded browser UI. - Campaign: `local-2026-09-30T21-30-11-021Z`. Earlier failed campaigns are retained separately; they exposed credential-prose handling and prompted the naming recovery fix. No failed result was regraded or deleted. - Reproduce with `pnpm test:e2e:runner -- --id task-titles.runner-codex-mini.local.prompt-title-standard --id task-titles.runner-codex-mini.local.prompt-title-ask --id task-titles.runner-codex-mini.local.preserve-explicit-title --max-automatic-retries 0` and an authorized provider key. - Full `pnpm -r typecheck` and `pnpm build` passed on the latest commit. The runner build used the configured external eval source tree. - Product E2E unit suite: **61 files, 818 tests passed**; E2E typecheck and UI token gates passed. - Title API/native regressions cover prompt-only and explicit child creation, user edits, ownership/company isolation, external reference refresh, cross-surface retry replay, and the 64-key limit without receipt eviction. All passed. Prompt-context coverage: **44 tests passed**. - Rust credential regressions: **35 tests passed**, including benign maintenance qualifiers and opaque credential rejection in every declared prose field. Catalog/report reconciliation: **28 tests passed**. Native recovery: **560 tests passed**. - Broad local `pnpm test:run`: **14,555 tests passed** in the general server group; two suites failed to initialize embedded PostgreSQL and the existing 40,000-file Git streaming stress test exceeded its 300-second macOS timeout. All three suites then passed in isolation (**5 tests passed**) without code or timeout changes. The original full local command exited nonzero and is not being represented as a clean full run. - Latest-head GitHub checks are green: **53 passed, 4 skipped, zero failed or pending**, including all test shards and the canary packaging dry run. Greptile reviewed the same commit at **5/5**, with zero unresolved review threads. ## Risks - The additive database field must reach the server and UI together. The migration uses `IF NOT EXISTS` and defaults existing tasks to a final title. - Title generation depends on the assigned agent running. Tasks without a run keep their provisional title. - Live qualification covers the native Codex path in Standard and Ask modes. API/legacy and Plan behavior have deterministic coverage. - The credential-prose exception validates the entire suffix against a closed maintenance vocabulary. Unknown suffixes, assignments, quoted values, credential prefixes, and diagnostics retain strict checks. ## Model Used OpenAI Codex, based on GPT-6, with reasoning, tool use, and code execution. The exact deployment ID and context window are not exposed in this session. The live eval uses the native Codex `gpt-5.4-mini` profile. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-30 16:48:24 -05:00
DottaandPaperclip	5edf55d735	fix: retire failed warm sessions before sandbox stop (#14747) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Native runner sessions can stay warm between turns in a reusable sandbox. > - Heartbeat stops that sandbox when a turn fails or is cancelled. > - The native executor treated every returned terminal result as a successful warm release. > - A failed session could therefore retain a transport for a stopped sandbox. > - This pull request retires unsuccessful sessions before heartbeat stops their sandbox. > - A retry can start without inheriting that stale transport. Successful turns stay warm. ## Linked Issues or Issue Description **What happened?** A structured failed or cancelled terminal result did not throw. The host kept its native session in the warm cache even though heartbeat stopped the reusable sandbox. Later session retirement could use the stopped provider transport and reject the retry. **Expected behavior** Retire the unsuccessful session and collect its managed files before returning to heartbeat. Keep successful sessions warm. **Steps to reproduce** 1. Run a native session with a warm lifecycle and a reusable sandbox. 2. Return a structured failed or cancelled result from the provider. 3. Stop the sandbox after the executor returns. 4. Retry with a changed native session identity. 5. Verify that the previous session was closed before step 3 and is not closed again during retry. **Paperclip version or commit** Developed from `b54b2dc35`, the current `origin/master` at implementation time. **Deployment mode** Native runner with a reusable Daytona sandbox. The same warm-session release path also serves local providers. Related work: #14735 added incremental managed-file checkpoints for warm turns. #14734 preserves tool outcomes during shutdown. This change fixes the host's handling of unsuccessful terminal results. ## What Changed - Retain a warm session only when its terminal run state is `succeeded`. - Use the existing failed-session retirement path for structured failures and cancellations. - Preserve the existing checkpoint-before-retirement path, including when provider shutdown fails. Collect stopped files after successful shutdown, including edits made during shutdown. - Retire the warm owner if the checkpoint or its receipt callback rejects, then propagate the initiating error. - Add ten regression cases for failure and cancellation, with and without managed files. They check cleanup order, cache removal, retry with a new session identity, and edits preserved when close rejects. - Document the lifecycle rule. ## Verification - The failed and cancelled managed-file regressions fail on unpatched master because the provider is not closed. - All 516 native executor tests pass, including ten new regressions. - `pnpm -r typecheck` and `pnpm build` pass. `pnpm test:run` finished its general-server group with 14,537 passed, 75 skipped, and one existing failure in `native-session-resume.test.ts` (`retainedNativeCleanupJournalMatches`, line 1125). A separate run using the unmodified `origin/master` executor fails the same assertion. The command stops before later local groups; all equivalent CI groups pass on this head. - All 56 PR checks are successful or intentionally skipped. Greptile reviewed this head at 5/5 with no remaining findings. - A real Daytona public-API probe forced a Codex authentication failure, waited for a confirmed sandbox stop, corrected the credential, and retried successfully in the same resumed sandbox. It verified the agent note in canonical storage and deleted the test sandbox. - Pumpkin staging on this exact commit: forced a structured authentication failure, confirmed sandbox stop, corrected the credential, and retried successfully in that same sandbox. Three successful turns kept the same live runner PID/start ticks, native session, runner instance, and provider session. Canonical downloads verified the note, all 8 MiB binary bytes, and deletion persistence. Subsequent checkpoints hashed/copied only 52 and 78 bytes. After sandbox deletion, canonical files still matched. Temporary secrets, agent configuration, and test policy were cleaned up or restored. - Unpatched live probes with both 5-second and 90-second retry delays also succeeded. The unit regressions prove incorrect retention; the original stopped-lease exception was not reproduced in those probes. The staging recovery campaign used the public retry API after an explicit reset of the disposable task’s already-deleted old sandbox/session. The UI did not expose a Retry control on the inspected task or run detail views. - Temporary API-key authentication was used for the campaign. This change does not repair the original managed-subscription authentication 401. ## Risks - Failed and cancelled turns now close their provider sooner. Successful warm-turn behavior is unchanged. - Cleanup uses the existing failed-session path. Its existing handling of cleanup errors is unchanged. - No database migration, API contract change, or dependency change is included. ## Model Used OpenAI Codex, GPT-6, with reasoning, tool use, code execution, and test analysis. The exact served model ID and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass (516 relevant executor tests; the full local suite has the independently reproduced baseline failure documented above) - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-30 15:36:06 -05:00
DottaandPaperclip	b54b2dc35c	fix: preserve warm Codex turns with incremental managed file checkpoints (#14735) ... ## Thinking Path > - Paperclip manages AI agents and keeps their instructions and files durable. > - Native Codex runners can keep a process alive between compatible turns. > - Managed file collection stopped that process after each turn, which defeated warm reuse. > - Agent folders can contain large images and other files, so full copies on every turn are expensive. > - This change keeps one managed directory for the live session and saves only file changes after each turn. > - Ownership, authorization, instruction changes, and process retirement still control when reuse is safe. ## Linked Issues or Issue Description Related: #13710 introduced native warm session reuse. This fixes managed file collection that still forced those sessions to stop. No duplicate open PR or issue was found. **What happened?** With managed instructions and warm native Codex enabled, consecutive turns reused a Daytona sandbox but started a new runner process each time. The managed directory collector required process termination before saving files. **Expected behavior** Compatible turns keep the same process and managed `AGENT_HOME`. Each completed turn saves added, changed, and deleted files before the next turn starts. Unchanged large files do not transfer again. **Steps to reproduce** 1. Use a native Codex agent with managed instructions and a reusable Daytona environment. 2. Enable warm session reuse and run three turns on the same task. 3. Write a large binary on the first turn, edit a small note on each turn, and delete a file on the second turn. 4. Compare process identity across turns and read the canonical files through the public agent-files API. **Paperclip version or commit** Reproduced on `d30b03bd8c17604cdab1533eeeeb087aba30e8b1`. **Deployment mode** Local server with remote Daytona execution; cloud native runner uses the same path. ## What Changed - Retain the managed directory only for the verified owner of a live native Codex session. - Checkpoint each completed turn before releasing the session for reuse. Retry unstable captures, then stop and collect when a warm checkpoint cannot be validated. - Compare metadata and cached hashes, stream only changed file payloads, record deletions, and validate path, content, quota, and authorization before saving. - Rotate sessions when canonical files, loaded instructions, credentials, or launch policy change. Fence stale collection and cleanup callbacks from later owners. - Keep cleanup and recovery aware of the current session owner. Recheck canonical files under the writer lock at handoff, attach the successor collector before fallible bookkeeping, and emit one final save receipt on checkpoint fallback. Preserve storage warnings across unchanged checkpoints. - Add regression coverage and a three-turn Daytona test with independent public API file checks, an unchanged 8 MiB binary, deletion checks, and strict process identity checks. - Document checkpoint consistency, lifecycle behavior, and local run-log counters. - Replace a timing assumption in the Daytona teardown test with explicit transfer-arrival gates after CI exposed an unset release callback. ## Verification - Full local `pnpm -r typecheck` and `pnpm build` passed. Server checks were repeated after the final storage-warning fix. - Runner E2E typecheck and 749 runner E2E unit tests passed. - Focused file checkpoint, directory ownership, instruction collection, native session, and merge tests passed. After review fixes, the managed-directory and native-session suites passed 550 tests, including intervening canonical edits, same-run fresh restore, failed handoff collection, and one-call fallback collection. Server typecheck passed again. The Daytona plugin suite passed 218 tests. The quota-warning regression failed before the fix and passed afterward. - Three real Daytona campaigns passed before the final handoff review fixes. The latest kept PID 547 across all three turns. The first checkpoint copied 8,388,635 bytes; the next two copied 36 and 54 bytes. Public API reads verified the binary, note contents, and deletion after every turn. Test cleanup deleted the sandbox. - The final head was also deployed to an isolated cloud staging instance and passed three UI-triggered native Codex turns with managed instructions. All three retained the same process ID/start time, native session, provider session, runner instance, and Daytona sandbox. Checkpoints copied 8,388,643 bytes on turn 1, then only 52 and 78 bytes on turns 2 and 3; those warm captures also hashed only 52 and 78 bytes. Independent canonical API reads verified every byte of the unchanged 8 MiB binary and the exact note contents after every turn; the deleted file returned 404 after turns 2 and 3. After restoring the original lifecycle and agent-auth configuration, removing the temporary secret, pausing the test agent, and deleting both test sandboxes, independent canonical API reads still verified the entire binary, the final 78-byte three-line note, and the deletion. The native runner flag remained enabled and the final serving revision remained the PR head. - Two earlier staging attempts are preserved as failures and are excluded from the acceptance result: a saved ChatGPT login failed with a provider routing 401, and its subsequent stopped-sandbox retry failed before provider startup with a closed-lease admission error. The successful campaign used a fresh sandbox and a temporary encrypted API-key binding. The stopped-lease retry remains unexplained; this campaign does not establish recovery of that failed sandbox. - All [Paperclip CI gates](https://github.com/paperclipai/paperclip/actions/runs/36750397355) pass on `26ef2ef56a389259246809805c0b34a4747eb86b`, including full test partitions, build, typecheck, runner verification, E2E shards, and the Canary clean public-npm install. Greptile reviewed that exact head at 5/5 with no unresolved review threads or outstanding findings. - Full local repository coverage used the existing CI partitions, but the 40,000-file Git streaming stress test timed out and its local retry was interrupted by macOS thermal emergency sleep; this is not a green full local suite claim. The exact stress test passed on the final head in [CI server shard 2/12](https://github.com/paperclipai/paperclip/actions/runs/36750397355/job/110008294290), in 111.9 seconds. - Repeat the live test with configured credentials and a Linux runner artifact: `pnpm test:e2e:runner -- --id daytona-warm-continuity.runner-codex.daytona.warm-three-turn`. ## Risks - This is a file-level checkpoint, not an atomic snapshot of the whole folder. Background writes after a capture are saved by the next checkpoint or final stopped collection. - Metadata scans still visit all paths. Modified files transfer in full; unchanged files do not rehash or transfer. - Incorrect ownership or reuse could collect the wrong directory. Run ownership fences, current authorization, stable capture validation, and stopped collection fallbacks are covered by tests. - Warm reuse remains opt-in. No database migration or fleet default changes. ## Model Used OpenAI GPT-6 through Codex, with reasoning, code editing, tool use, and test execution. The exact serving model ID and context-window size are not exposed by this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-30 13:33:37 -05:00
DottaandPaperclip	dd7fc1f90a	fix: raise the native journal read limit to 256 MiB (#14711) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Native sessions persist control-plane state so they can resume safely. > - The state includes committed provider history needed for recovery. > - The server, runnerd recovery, and durable control plane validate this state before trusting its identity. > - Their differing 64 MiB and 192 MiB limits can reject a valid journal before recovery. > - This pull request aligns all three local state limits at 256 MiB. > - Larger files remain bounded, while recovery can read larger valid histories. ## Linked Issues or Issue Description Refs #13882 Refs #14312 ## What Changed - Raise the server and runnerd recovery limits from 64 MiB to 256 MiB, and align the durable control-plane limit from 192 MiB to 256 MiB. - Add coverage for a valid history above 64 MiB and rejection above 256 MiB. ## Verification - Matching server recovery passed with more than 64 MiB of actual committed event payloads (128 events with 512 KiB deltas). - The real runnerd exact-authority resume regression with the test Codex provider passed with 193 MiB of valid JSON whitespace appended. It crosses the former 192 MiB core limit and confirms the same provider identity. This exercises the runner process and durable control plane with a simulated provider, not a live OpenAI API call. This test used approximately 1.15 GiB peak RSS. - The actual runnerd reader accepted valid 256 MiB JSON and rejected valid 256 MiB + 1 byte. The reader call took 231 ms; the fresh process peaked at 1,244 MiB RSS. - Server tests reject mismatched identity above 64 MiB and files above 256 MiB. - `pnpm -r typecheck`, `pnpm build`, and `git diff --check` passed. - Full local `pnpm test:run`: 13,730 passed, 575 skipped, 7 failed across 6 files. All failures were embedded PostgreSQL startup errors after five attempts. They affected agent hiring, instruction revisions, environment images, reviewed chat bindings, issue monitoring, and legacy continuation authority. The focused journal tests passed; the latest pushed head passed all ordinary CI checks. Superagent is the only blocking check. ## Risks - **Open review concern:** Greptile is 5/5, but Superagent is `ACTION_REQUIRED` with two P2 findings on the server and runnerd readers. Both flag the increased synchronous parsing and memory cost. This PR keeps the requested fixed-limit change small. It does not add a worker parser or a process-wide memory budget. This resource tradeoff needs review before merge. - Large state parsing is synchronous and can consume several times the file size in memory. - Remote checkpoint archive and expanded-size limits remain 64 MiB, so this change alone does not make larger remote checkpoint transfers portable. ## Model Used - OpenAI Codex, GPT-6, with delegated assistance from `gpt-6-luna` at high reasoning effort; tool use and code execution. The GPT-6 context window is not exposed in this task runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [ ] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-30 10:08:25 -05:00
DottaandPaperclip	24beb00575	feat(runner): add rich ACP transport and durable interaction foundation (#14430) ... Add shared rich ACP transport, durable questions and permissions, verified provider packaging, and bounded activity and plan presentation. Keep Cursor, Copilot, and Pi pending their separate provider qualification. Persist interaction settlement before publication, fence failed writes until fresh recovery, and preserve owned-process cleanup. Incorporate reviewed mainline integration with extended harness coverage. Co-Authored-By: Paperclip <noreply@paperclip.ing>	2026-09-29 08:56:21 -05:00
DottaandFry	3ca196b0a6	feat(agents): persist agent files across tasks without revision history (#14420) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - An agent needs personal files across tasks and sessions. > - AGENTS.md is one file in that directory. Supporting files need the same persistence. > - The Instructions Editor and agent runs must share one current directory. > - Concurrent runs should apply only the files they change. The last sync of the same file wins. > - This pull request uses existing file transport and removes temporary copies after sync. > - Old instruction-only sessions keep their restore contract. New saves do not create revision history. ## Linked Issues or Issue Description Refs #14325. This replaces its revision-oriented design with persistent agent files. Keep #14325 unmerged. Transport prerequisite #14416 merged first at `d172197117a14b80a1eb2d2835a0e7cce2679656`. This PR now targets master and remains below 100 changed files. Related work: #4513 and #8798 cover instruction tooling. This change handles run synchronization, cross-task personal files, browser editing, and old-session restoration. ## What Changed - Keep one current directory per company and agent. Point AGENT_HOME at a temporary working copy for each active run. Keep task files and provider HOME separate. - Restore text, binary files, and nested folders through workspace transport. Exclude remote agent files from task Git snapshots with a self-ignoring file inside the reserved runtime directory; never write through repository-controlled Git metadata. - Collect after the provider and child processes have stopped. Keep resumable conversation state. - Apply changed and deleted files under the agent lock. The last sync wins for the same file. Unrelated concurrent changes survive. - Remove temporary copies after successful sync, rejected sync, and staging failure. Register ownership before copying so restart recovery can remove interrupted preparation. Retry transient synchronization up to three times. Preserve the original remote lease reference until deletion succeeds; restart cleanup never acquires a replacement sandbox. Do not create captured directories or a conflict-review queue for new runs. - Keep browser editing, stale-draft protection, and streaming binary downloads. Keep the instruction entry and text editor limited to 1 MiB. - Keep historical agent-folder sync failures on their affected runs instead of repeating them above current saved instructions. Preserve legacy candidate review and current browser-save errors. Avoid duplicate quota warnings while retaining separate sync failures when they describe a different problem. - Require target-scoped caller grants for peer instruction access, while preserving self edits, responsible-user checks, and protected-change consent. - Treat full storage as a nonblocking run warning, never an agent pause or run-admission failure. Restore already-over-quota saved folders so ordinary agent cleanup can recover; warn on each run until cleanup. The run detail view shows the warning. - Allow 256 MiB per file, 2 GiB per directory, and 100,000 entries. Hash large files as streams. Check editor-save quotas with metadata instead of hashing unrelated files. - Preserve old native inputs, instruction-only copies, paths, digests, and pending legacy candidates. Adopt old revision heads once. New writes do not append history rows. - Add idempotent migration 0287 and verify upgrades from the preview tables and receipts. - Add nine interactive stories under **Agents / Persistent files**, including automatic incoming edits, stale browser drafts, and storage-limit diagnostics. ## Verification - Merge candidate: `4f5390107ec6ffd80a76d1d2e85530e66f21d079`, after merging current master and the landed transport prerequisite. Integration required no manual conflict resolution; the feature remains 99 changed files. Full workspace typecheck, production build, token gates, and 715 focused tests passed on this merge candidate. Fresh Greptile review is 5/5 with no unresolved findings. All 55 checks passed, with four conditional skips, including the build, typecheck, browser E2E, and canary dry run. A single retry recovered four jobs interrupted by runner shutdowns; no source changes were required. - Historical-warning UI fix: all 6,834 UI tests across 640 files passed, including regression coverage for three old failures, legacy preserved edits, and warnings scoped to the affected run. Full workspace typecheck, production build, Storybook build, and token gates passed. Browser-verified Storybook playtests passed for Historical Failures After Successful Save, Storage Limit, and Full Storage Run Warning. - Review follow-ups at `4e20c9fb2`: all 18 focused tests passed, including external Git directories, linked worktrees, symlinks, hardlinks, and distinct I/O failures alongside storage warnings. Server and UI typechecks, token gates, and the production build passed. - Storage warning regressions at `0724f3012`: all 33 directory tests and all five heartbeat-list tests passed, with no skips in their successful runs. They cover repeated runs while full, an already-over-quota saved folder, cleanup, warnings retained after unrelated save failures, and bounded warnings in large result JSON. Server typecheck passed after the final warning fixes. - Full workspace typecheck, production build, and token gates passed during this follow-up. Product E2E harness: 631 tests passed across 52 files; harness typecheck passed. Earlier native session/context and directory/legacy collection suites passed 537 tests; Runner unit/transport suites passed 329 tests. - **Real E2E at `0724f3012` (before this follow-up):** legacy local Codex and native Daytona Codex each passed six tasks, one server restart, seven independent assertions, and cleanup verification. Both prove browser-to-agent edits, agent-to-browser edits, nested/binary restoration, per-file last-sync-wins, a successful run after an oversized save rejection, and cleanup clearing the warning. - Native local Codex also passed the six-task quota flow before the final warning-retention fixes. That pass began at `918d1ed02` while the bounded-result warning fix was being edited, so it is not claimed as exact-final-head evidence. Its final-head rerun failed during embedded PostgreSQL bootstrap before any provider run: the macOS host had 87,365 of 87,381 SysV semaphores occupied. No unrelated services or kernel limits were changed. - The final-source report intentionally records **2/3 cells passed**, preserving the blocked native-local attempt: `tests/runner-e2e/results/agent-files-quota-final-20260928-report/`. Earlier failed attempts and provenance notes remain under `tests/runner-e2e/results/agent-files-quota-final-20260928-input/` and the original campaign directories. - Daytona used immutable image `ghcr.io/paperclipai/paperclip-daytona-runner@sha256:5643f0d801417cae3581833a1a3bc6715b325e028602738d2652c44cac5dc6bf` and its exact Linux runner binary. Controller source is `0724f3012`; image source is recorded separately. - Legacy-session compatibility and all three ACP Stop/resume browser regressions passed on the prior validated feature head `169fab46d5af21caa2269b4c1b29b69c933a6951`. They assert the same provider session is retained and interrupted writes are not replayed. Migration upgrade tests also passed earlier. - Nine interactive stories are under **Agents / Persistent files**, including **Full Storage Run Warning**. Its playtest and visual browser inspection passed; the warning states that runs continue and the editor remains available. - Prior-head checks on `4e20c9fb2`: 55 passed, two conditional jobs skipped, no failures or pending checks. All eight browser E2E shards and their aggregate passed. Fresh Greptile review is 5/5 with no findings; all review threads are resolved, the security scan passed, and GitHub reports no merge conflicts. - The broad local follow-up test run was interrupted after host semaphore exhaustion affected isolated PostgreSQL instances. It also encountered the existing macOS long-path fixture failure and two timeout failures. This is not a claim that the full local suite passed. Logs are retained; focused storage/warning tests passed. ## Risks - A later sync can overwrite an earlier edit to the same file, including a saved browser edit. There is no text merge or retained version. This is the intended last-sync-wins policy. - A save that exceeds a storage limit is rejected and its temporary copy is discarded. The run itself continues normally, and later runs restore the last saved files with a warning until cleanup. Transient sync failures get bounded retries. An I/O failure partway through a sync can leave some files updated; a failed receipt does not claim whole-folder success. - Larger folders increase copy time, network traffic, and temporary disk usage. Active runs still need working copies. Terminal runs do not accumulate archives. Operators must provision disk for agents and configured concurrency; these limits are not company-wide quotas. - A restored old native session remains instruction-only until a fresh session starts. Its original conflict fence and existing pending candidates remain compatible. - Provider processes close at the collection boundary. Conversation resume remains available, but warm process reuse is lost. - Backups must include the instance filesystem and database. External bundles keep their existing behavior until explicitly moved to managed storage. ## Model Used OpenAI Codex, GPT-6 family. The session does not expose a more specific model ID or context-window size. Reasoning, code execution, and browser tools assisted this change. Real provider E2E uses `gpt-5.6-sol`. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Fry (Paperclip) <noreply@paperclip.ing>	2026-09-29 08:25:56 -05:00
Devin FoleyandPaperclip	ad1f7e98ea	fix: retain diagnostic reasons for native runner failures (#14481) ... Retain bounded reasons for runner identity, harness recovery, and provider-pack read failures. Preserve existing ownership and cleanup proofs and compatibility with receipt-gated chat recovery. Verified with executor, recovery, diagnostic privacy, typecheck, build, and full CI checks. Co-Authored-By: Paperclip <noreply@paperclip.ing>	2026-09-28 16:16:19 -07:00
DottaandPaperclip	18e8c121d9	fix(runner): include Grok support in public installs with sandbox prerequisites (#14024) ... ## Thinking Path > - Paperclip manages agents through a shared native runner. > - Built-in harness support should ship with Paperclip's public distribution. > - Grok already speaks ACP; it does not require a new public bridge package. > - Sandbox provisioning owns the native executable and its pinned version. > - The runner must verify that prerequisite without downloading it during npm installation. > - This change separates built-in launcher identity from external runtime identity. > - Clean npm installation and live staging checks verify the distribution boundary. ## Linked Issues or Issue Description Refs #13882, #13973, #13977, #13979. This follow-up now targets master after #13882 was squash-merged. It replaces the private `@paperclipai/grok-acp` workspace package with runner-owned assets. Current master is included so the branch also contains the merged scheduler, complete-event capture, and durable cleanup fixes. ## What Changed - Ship Grok launcher and qualification metadata inside the runner's compiled output and the public server's vendored runner tree. - Remove the separate Grok npm package and all package-manager install hooks for this runtime. - Require the checksum-verified Grok Build 1.0.13 binary at `/opt/paperclip/providers/grok/1.0.13/grok` in the selected execution environment. Provision it explicitly in the Daytona image and CI setup. - Keep native binaries outside the provider pack. Bind the built-in launcher into the pack manifest. - Preserve executable leases, descriptor-backed startup, credential fences, permissions, and exact ACP model admission. - Use `builtin:grok-acp` and `native:grok` as profile identities. Historical package-profile sessions fail closed on resume rather than being silently reinterpreted. - Resolve built-in assets from the authenticated sidecar location, including public server npm layouts. Keep the controller path out of provider environments. - Add clean npm tarball installation verification to the existing trusted canary CI job and the admitted manual EC2 verification path. It stages a unified release version and runs npm lifecycle scripts, then verifies missing-prerequisite rejection and admission after separate provisioning without credentials or inference. - Include the controller-owned provider pack in stamped Cloud images. Unstamped local images omit the pack and remain usable; remote ACPX requires full source provenance. - Correct CLI approval-page metadata for an already authenticated Cloud board user; approval authorization remains unchanged. - Honor explicit native-runner enablement in the Cloud agent picker and direct setup page, keeping the flag disabled by default. - Allow selecting the execution environment before connecting credentials. Include Grok in the existing authenticated hello-probe flow, targeting its pinned native prerequisite for runner setup. - Recover an existing subscription sign-in conflict through an explicit cancel-and-retry action, serialized after cancellation succeeds. - Preserve the selected ACPX harness before normalizing config fields, so new Grok agents use the Grok default model. - Keep the credential-free Cloud provider pack root-owned and readable after runtime UID remapping; verify manifest and referenced asset access under an unrelated unprivileged UID during image builds. - Archive prior failover backups alongside explicitly replaced harness state, preserving evidence while preventing stale backups from blocking a fresh replacement. - Update Daytona image content inputs and contract tests for the built-in assets and explicit provisioner. - Document and regression-test the shared `approve-all` default for Grok setup, saved configuration, and native execution. Explicitly saved restrictions remain unchanged. ## Verification Current merge-repair head `df09eb3e1a619430ad8419a0ee9aedd486689b05` incorporates master `f1a394bd30cb56fb9e479f98b9f50176fe921858` after the base PR was squash-merged. All 12 conflicts came from incoming files identical to the tested pre-squash base. The final tree exactly matches a three-way merge using that original base, preserving built-in Grok distribution and removal of the obsolete private package. All 252 focused runner/UI tests, six npm-isolation tests, and token gates pass. Fresh exact-head Greptile review is 5/5 with no outstanding findings; security scans and EC2 native compilation pass. All current-head CI is green: 56 successful checks/statuses and four intentional skips ([run 36468768035](https://github.com/paperclipai/paperclip/actions/runs/36468768035)). The repository owner explicitly authorized bypassing code-owner approval after all checks passed; no CI checks or repository protection settings are bypassed or changed. The only remaining PR was removed from the completed stack metadata to permit native auto-merge. Earlier integration head `78cb306ecc41b5c96577c26c1d89153b0ef865a1` includes master `3447609d2247e75e55d91493dda91a608364f672` (2026-09-28). Two master advances during verification overlapped the eval catalog; the final merge preserves Grok qualification, completion updates, and bounded API-response reading in all 348 cells. All 77 focused catalog/eval/workflow tests pass. Both native stack layers (#14397) are mergeable, and both exact-head Greptile reviews are 5/5 with successful security scans and no unresolved review threads. All current-head CI is green: 56 successful checks/statuses and four intentional skips ([CI attempts](https://github.com/paperclipai/paperclip/actions/runs/36447124691)). The initial attempt lost two EC2 runners to shutdown signals and stalled a third shard during dependency preparation; all three passed the same-commit failed-job-only retry. Trunk code-owner requirements remain enforced. The review summary’s non-blocking saved-asset offset classification note concerns code already merged in #14301; those runtime files are identical to master and outside this stack’s diff. Historical live evidence below retains its original source revisions. [Final public npm verification](https://github.com/paperclipai/paperclip/actions/runs/36445542764) passed on `76ea70cd4d13786a042af9df82f0fd7a8c85ae30`: 17 public packages, an executed offline lifecycle sentinel, unchanged consumer lock, built-in launcher, missing-prerequisite rejection, and verified separately provisioned binary/command lease. Provisioning and cleanup require no host privilege elevation; only the positive probe mounts the temporary native binary read-only. The verifier is unchanged by the final master merge. All six isolation tests and an offline npm smoke test pass. The prior head had 56 green CI checks and a 5/5 review after two unchanged tests timed out and passed a failed-job-only retry ([CI attempts](https://github.com/paperclipai/paperclip/actions/runs/36444597313)). All 56 recovery-display/lineage tests pass; re-review cleared the already-covered missed-retry concern. Earlier EC2 failures remain retained: [npm lockfile rejection](https://github.com/paperclipai/paperclip/actions/runs/36436311203), [missing compiler in the slim image](https://github.com/paperclipai/paperclip/actions/runs/36440210984), and the aggregate 15-minute test timeouts in those broad runs. Both broad attempts passed typecheck, token gates, Product E2E type/unit checks and build. The focused EC2 lane preserves the existing trusted-actor and immutable-source gates. Earlier documentation/test checkpoint `ff244c4fd78a7ede5a3e00efe09f475f133ef33e` leaves runtime behavior unchanged. 154 focused tests pass across configuration building, native provider resolution, permission policy, credentials, UI configuration, and new-agent setup (including both Grok auth modes); token gates pass. All fresh CI is green for this head: 56 successful checks/statuses and two intentional skips ([run 36367065119](https://github.com/paperclipai/paperclip/actions/runs/36367065119)). Greptile is 5/5 with no new findings. Grok already inherits the shared `approve-all` default, so unattended setup requires no manual permission change. Runtime head `bb5a9307991f1ac567b781970ef11b39d518e19b` fixes a final staging continuation failure before provider startup: explicit replacement archived the old harness but left its failover backups active, which caused `runner_harness_state_mismatch`. The regression fails before the fix and passes after it; all eight adjacent recovery-safety cases also pass. Old backups remain inspectable inside the continuity archive. All fresh CI is green at this head ([run 36360839248](https://github.com/paperclipai/paperclip/actions/runs/36360839248)), with a 5/5 review. One unrelated Cursor test timed out in the initial server shard; the same-commit failed-job rerun passed, and both attempts are retained. Staging deployment is confirmed healthy on this revision. The controller image is `ghcr.io/paperclipai/paperclip@sha256:6ad91c487910ccd2596ff7aed0a3a3ea5233d12b51b83cd6e1402237749b9673`. The final browser-created staging task passed on this exact revision with API authentication: context read → structured human question → controller restart → answer submission → same native provider session resumed → document saved → task Done. The two turns took approximately 119s and 77s. The actual write receipt was applied, and the saved document has exactly one revision containing the selected answer and requested marker. Usage and cost were not reported. [Controller image build](https://github.com/paperclipai/paperclip/actions/runs/36360889243). - Previous integration head `a44f7dbb6b6f77cd9ed893756ca453307f281e5f`: all CI green (53 successful checks/statuses, two intentional skips), including repository typecheck/build/tests, native Runner tests, browser shards, and canary installation checks. [CI run 36358672529](https://github.com/paperclipai/paperclip/actions/runs/36358672529). Greptile is 5/5 with no unresolved findings. - Focused checks cover Grok credentials, executable admission, launcher assets, provider-pack paths/permissions, workflow contracts, setup defaults, CLI authorization, and subscription conflict recovery. All 39 protocol definitions validate. Final integration checks pass 124 catalog/evidence/cache tests and nine project-form tests; token gates pass. Some local dependency checks could not load the stale installed dependency tree; the corresponding fresh EC2 checks pass. - Clean public npm installation passed on EC2 at `8b172ebcf8e02e30662d830c00f3961e3bd459ec` ([run 36164964900](https://github.com/paperclipai/paperclip/actions/runs/36164964900)): 17 unified-version packages, lifecycle scripts enabled, built-in launcher present, no separate Grok package or npm-downloaded binary, missing prerequisite rejected, separately provisioned native executable and command lease verified. No credentials or inference were used. Subsequent changes preserve this npm asset layout. - The immutable Daytona prerequisite image is `ghcr.io/paperclipai/paperclip-daytona-runner@sha256:98957d5be0ac774d086b6402b5849e8e6356fec70fb8c09fca6eb4ed6de918e0`, built from `5a2db471f3ddabe77f9f80e76ed27f996cb97fba`. The previous Cloud controller image was `ghcr.io/paperclipai/paperclip@sha256:fd914e1ab1e45f741e8e078ff452d16f082d7ac05f9b4b3506d3a3c64150d204`, built from `a44f7dbb6b6f77cd9ed893756ca453307f281e5f`; it is superseded by the latest image above. Its EC2 build verified provider-pack access under an unrelated unprivileged UID. - Browser staging at `40f898bc4cba73c1dff4e6344a3983ba0fb247ef` passed full Grok onboarding with the correct `grok-4.7` model, saved credential delivery, and pinned Daytona execution. A browser-created task read context and asked the structured human question. After a controller restart, answering the persisted question resumed the same native provider session, saved the requested document, and completed the task. Actual tool outcomes and durable state agree: one question and one document revision. The two successful turns took 42.7s and 63.1s; usage and cost were not reported. - Restricted policy returned the expected `approval_required` outcome. Functional staging tests explicitly selected `approve-all`; controller authorization and governed approvals remain enforced. Temporary board CLI access was revoked and verified rejected (HTTP 401), and the disposable onboarding agent was paused. Failures remain retained: the pre-fix continuation failure (its task remains blocked; the passing final task is fresh), the original Cloud provider-pack permission failure, the expected restricted-policy denial, the superseded npm staging failure, and an earlier monolithic CI infrastructure timeout. Browser CI exposed a project alias/form race; the final stack uses master's stronger draft-preservation fix and all browser shards pass. Historical full subscription/API protocol and Product rosters retain their original source revisions and do not qualify this packaging revision. No local Docker or Rust build was used. ## Risks The branch includes master’s draft-preservation fix for project URL aliases. It keeps the same project’s edit form mounted and clears prior data when the project or company changes. Custom sandboxes and local execution hosts must provision the pinned binary before Grok starts. Missing, changed, unsupported-platform, and symlinked executables fail admission. The new builtin profile cannot resume sessions created with the former private-package profile. Existing Claude/Codex npm bridge profiles retain their package pins. Grok restricted modes preserve the selected policy but cannot automatically admit Paperclip calls: ACP permission metadata does not independently bind tool authority, so those calls stop with `approval_required`. New Grok configurations default to `approve-all`, including API configurations that omit the mode. Existing explicitly restricted configurations remain restricted; controller authorization and governed approvals remain enforced. ## Model Used OpenAI GPT-6 through Codex, with tool use and code execution. The exact serving model identifier and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-28 14:54:44 -05:00
DottaandPaperclip	992f720262	fix: make runner task context ownership explicit (#13753) ... <!-- Write all pull request text in Simplified Technical English (ASD-STE100). --> ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Task descriptions, comments, continuation data, skills, and execution rules enter several agent adapters. > - The same source can be rendered by more than one automatic input carrier. > - Failed resumes can also rebuild input from stale or compact context. > - This pull request gives each Paperclip-owned source one delivery owner and preserves the required transport boundaries. > - It adds deterministic adapter, interaction, runner, and browser tests for these boundaries. > - The benefit is more predictable context delivery with explicit evidence for later live qualification. ## Linked Issues or Issue Description Related: #13144 removes a duplicate environment payload and bounds wake lists. Related: #11360 addresses Hermes resume behavior. This pull request preserves compatible active-session formats while repairing context ownership and stale question creation. **What happened?** Task descriptions and comments could enter more than one automatic context block. Native transports could wrap a complete model input in a second task envelope. Some legacy and gateway adapters could omit the owned assignment on ordinary tasks or rebuild a failed resume with stale compact context. A continuation could also request a question after newer human comments had arrived. **Expected behavior** Each task or comment source has one automatic model-facing owner. Distinct comment IDs and repeated wording remain distinct. Fresh fallback attempts rebuild the required full context. A question request is rejected when newer queued human direction makes it stale. Harness access policy remains owned by execution configuration. **Steps to reproduce** 1. Build a task with a description and current comments. 2. Capture the actual adapter or runner input. 3. Compare source ownership and task-envelope nesting. 4. Queue a human comment before a continuation requests a question. 5. Trigger a failed resume and inspect the fresh retry input. 6. Run the focused adapter, interaction, runner, and browser checks. ## What Changed - Add shared prompt-section selection at the provider-attempt boundary. - Deliver owned assignment context through native, legacy CLI, ACP, gateway, cloud, Pi, Kimi, Grok, Gemini, OpenCode, Cursor, OpenClaw, and Hermes paths. - Rebuild full or compact context after resume recovery changes the attempt. Add native and Claude ACP tests of actual recovery requests. - Preserve custom templates, loaded instruction files, execution policies, and older active-session formats. - Record continuation source metadata and reject stale question creation under the issue-row lock. - Add explicit Product E2E context-integrity profiles, prerequisite gates, credential-isolation checks, and report fixtures. - Bypass service-worker forwarding for same-origin Vite development modules. A real Chromium test fails with resource exhaustion before the repair and passes after it. Production asset caching keeps its existing policy. - Add browser diagnostics and service-worker module-loading regressions. - Add an explicit zero-retry eval option. The default retry behavior remains unchanged. Each campaign records its effective policy. - Remove the model-facing working-directory sentence from four prompt builders. Existing workspace, sandbox, permission, and custom-template configuration remains unchanged. - Align the everyday workflow assertion with the current 47-entry catalog. Compared with current upstream master, the branch carries the context-ownership implementation and its tests, the explicit context-integrity catalog and evidence harness, and the focused browser regression checks. ## Verification **Merge assessment:** focused regression evidence supports merge. This is not full completion of the original broad qualification matrix. The maintainer has authorized merge after fresh verification of the master integration. - Current head: `bbd52f82114eabf09bc7b1a7e97d54a5b43bbc00`. This integrates current master `2f585ef26a1814fa209715242d1ca791b63e4c4e`. All 14 conflicts are resolved. Cancellation checks, workspace finalization, native Grok support, and both sets of tests are retained. - Current-head Greptile: **5/5**, with no blocking findings. The review names this exact commit. All **59 reported checks are terminal: 55 successful, 4 skipped, zero pending or failing**. This includes the full root general and serialized suites, separate runner checks, typecheck, build, canary, browser E2E, Docker, and security checks. The successful legacy security status is included in that total. - After integration: workspace typecheck and full build passed. Separate runner checks passed: **2,160 TypeScript tests (10 skipped), 582 Rust tests, and 39 preparation checks**. Other passing checks include 621 Product E2E harness units, 376 focused shared/adapter tests, 160 real-database/API tests, 86 Hermes tests, 18 browser-support checks, and Product E2E typechecking. The complete root suite passed in CI. The duplicate local monolithic root run was stopped after that CI result; it is not counted as a completed local pass. - New native recovery coverage retains full assignment, completion contract, and explicit skill selection after safe replacement, for old and prepared input formats. Full native session test file: **136/136 passed**. - New Claude ACP coverage captures actual fresh, resumed, and missing-session fallback requests. It verifies one assignment copy, comment order, identical text under distinct comment IDs, and full fallback context. Full file: **33/33 passed**. Both affected TypeScript checks passed. - Existing deterministic tests cover source revisions, approval and trust boundaries, completion validation, custom templates, compatible sessions, standalone driver wrapping, and maintained adapter transport requests. - Provider-free browser support: **17/17 passed** after the master merge. Service-worker unit tests: **33/33 passed**. The module-overload regression failed before the repair and passed after it in real Chromium. ### Fresh live comparisons The new batch ran exactly four Product E2E attempts. **All four passed on the first attempt; no retries.** Each has six terminal matchers plus the existing browser lifecycle and invariant checks. | Exact case ID | Control | Candidate | |---|---|---| | `core-compatibility.runner-codex.local.plan-revise-accept` | Passed | Passed | | `local-session-integrity.runner-acpx-claude.local.structured-question-restart-resume` | Passed | Passed | The plan case checks a revised canonical plan and revision-bound approval before completion. The question case restarts the server before submitting the answer, then verifies the continuation completes. Control source is `dfa4e1bda8d50a1a01746603251a9128dbe9d0d6`. Candidate source is `79fcdb5dece501d28064ea9da306603881b46f0c`. They use identical frozen definitions and provider versions: Codex `0.156.0` with `gpt-5.6-sol`; ACPX `0.13.1` / Claude ACP `0.73.0` with `claude-sonnet-5`. The September 24 head added master browser recovery and test-only changes. The September 28 head also integrates newer master changes, including cancellation, workspace finalization, and native Grok. These are frozen-source live results, not exact-head live runs. The candidate received one description copy where the control initially received three. The submitted initial plan envelopes were 7,969 versus 19,097 characters. Question envelopes were 7,592 versus 18,919. These are structural measurements, not whole-provider token or dollar savings. ### Earlier evidence and failed attempts - The preceding fresh batch has four effective passing pairs: OpenCode comment continuation and assigned skill, native Codex comment continuation, and native Claude comment continuation. It retains **11 attempts: eight passed and three failed**. - Original failures remain recorded: missing local PostgreSQL library links before task creation; host-sleep cleanup after task/page checks passed; and a Claude **control** session-open rejection before a model turn. Setup was repaired identically on both worktrees. The permitted unchanged infrastructure retries passed. The underlying Claude provider startup error was not retained and remains unknown. - Older R2 retains **17 passes and one failure** across 18 attempts, including eight both-pass native/legacy Codex/Claude pairs. Its OpenCode blank-page failure led to the service-worker repair. R2 is historical evidence: master changed the native fixed prompt and removed duplicate wake environment data afterward. - The September 24 CI run initially failed one unrelated preview readiness test (`ECONNREFUSED` on its local fixture). Its test and production code match master. Isolated local verification passed **28 tests, 3 skipped**. One unchanged CI retry passed the full shard: **831 passed, 1 skipped**, including all **31 preview-exposure tests**. The aggregate CI gate passed afterward. The precise startup cause remains unknown; a port race is a hypothesis, not a proved cause. ### Limits The original wider profile/workflow matrix, repeated trials, and remote Daytona qualification are incomplete. These results support a focused merge recommendation, not statistical equivalence or universal harness qualification. Some usage receipts are missing in both variants, so no token or dollar savings are claimed. The $500 ceiling was preserved using conservative allowances; failed attempts and unknown charges remain in the ledger. Reproduce the focused additions with `pnpm exec vitest run packages/adapters/claude-local/src/server/acp.test.ts` and `pnpm --filter @paperclipai/paperclip-runner exec vitest run src/native-session-runtime.test.ts`. Full checks use `pnpm -r typecheck`, `pnpm test:run`, `pnpm build`, and the separate runner checks. Paid evals require the frozen definitions, profiles, and credentials; do not use `--all` as a substitute for the selected cases. ## Risks - Context placement changes can affect model behavior. Deterministic checks cover the selected paths, but live qualification remains incomplete. - The stale-question guard can reject a request when queued human comments arrived during the run. This is intended. - New stored inputs and model envelopes retain compatibility readers for older active sessions. - Custom templates may intentionally repeat content. - Removing a model-facing working-directory sentence does not change filesystem, command, sandbox, or permission configuration. - The worker bypass applies only to same-origin development module paths. Cache-policy tests preserve private-response handling and production asset caching. Mounted HTTP fixture changes remain test-only. - This PR does not claim measured token savings or statistical equivalence across every harness. ## Model Used OpenAI Codex, exact model gpt-6-astra, with repository tools and code execution. Bounded supporting work used gpt-5.6-luna and gpt-6-luna. The serving context-window size is not exposed in this task. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have described the issue in-PR using the required issue fields - [x] I have not referenced internal/instance-local Paperclip issues or links - [x] My branch name describes the change and contains no internal ticket id - [x] I have run the focused local checks and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect these changes - [x] I have considered and documented risks above - [x] All current-head Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups for the current head - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-28 14:49:14 -05:00
DottaandPaperclip	f1a394bd30	feat(runner): add Grok Build through native ACP (#13882) ... ## Thinking Path > - Paperclip manages AI agents and governs their work. > - Its native runner uses structured provider protocols for sessions and tools. > - Grok Build supports ACP over stdio, but the runner did not expose it. > - Native execution requires company-scoped credentials, verified identities, and permission gates. > - This change adds Grok through ACPX for local and Daytona execution. > - Subscription login and explicit API-key execution have separate credential paths. > - Qualification grades real tool outcomes, durable state, and browser workflows. ## Linked Issues or Issue Description Refs #13845, #13847, #13850, #13878, #13901, #13973, #13977, #13979. Add **Grok Build** to `paperclip_runner` with `provider: "acpx"`, `acpxAgent: "grok"`, and model `grok-4.7`. Existing legacy Grok agents keep their adapter. Merge the three companion fixes (#13973, #13977, #13979) before treating the integrated Product qualification as deployed behavior. ## What Changed - Synchronize shared, TypeScript, Rust, server, validation, and UI provider contracts. - Run Grok native ACP stdio through ACPX and the authenticated Paperclip MCP bridge. Verify the pinned executable and exact ACP model identity. - Prefer company subscription login. Support an explicit company-secret API key without automatic paid fallback. Fence refresh and copyback to the same account and remove private runtime credentials after containment. - Preserve selected permissions, cancellation, durable session identity, resume, and restart recovery. Keep unsupported steering and goals unavailable. Preserve missing usage and cost as unknown. - Package checksum-verified Grok Build 1.0.13 for Daytona with an immutable, signed image built on EC2. - Add deterministic admission, protocol, permissions, identity, credential, failure, and cleanup checks. Add the maintained 39-case protocol roster and separate subscription/API Product profiles. - Fix live-test findings in reasoning events, reloads, idle-owner retirement, credential-home cleanup, expired-login model discovery, launcher pinning, and rerun evidence selection. - Align control-plane state readers with the transport's 64 MiB bound while retaining identity, ownership, lifecycle, and size rejection checks. - Stabilize two asynchronous CI assertions while retaining actual outcome and filesystem-evidence checks. ## Verification Current integration head `f114948376056fe0b6b34c1496ae8667b59daa63` includes master `3447609d2247e75e55d91493dda91a608364f672` (2026-09-28). Two master advances during verification overlapped the eval catalog; the final merge preserves Grok qualification, completion updates, and bounded API-response reading in all 348 cells. All 77 focused catalog/eval/workflow tests pass. Both native stack layers (#14397) are mergeable, and both exact-head Greptile reviews are 5/5 with successful security scans and no unresolved review threads. All current-head CI is green: 56 successful checks/statuses and four intentional skips ([CI run](https://github.com/paperclipai/paperclip/actions/runs/36447097232)). Trunk code-owner requirements remain enforced. The review summary’s non-blocking saved-asset offset classification note concerns code already merged in #14301; those runtime files are identical to master and outside this stack’s diff. Historical live evidence below retains its original source revisions. Earlier integration checkpoint: `24fc9b94ca0afb21ccdc8d26dbb2e4b258ad72cb`. Refreshed against master `0f14d2612`, preserving Grok qualification alongside the new accounting and lifecycle suites. All 124 focused catalog, evidence, and service-worker checks pass. The current base workflow includes the explicitly selected public-install verification lane; follow-up #14024 supplies its verifier script. CI at that earlier checkpoint was green (56 successful checks/statuses, four intentional skips), and the review is 5/5 with no unresolved findings. Prior feature CI at `fd73f0a9b1ecdf4094685054028df71739ddc3e1` passed ([run 36148259902](https://github.com/paperclipai/paperclip/actions/runs/36148259902)); that is historical evidence, not a current-head result. Paid Product measurements use frozen integrated source `2d939a92b21dcaf5c77c88b54d96784d2ddd0699`, which combines the feature with #13973, #13977, and #13979. That source passed all 52 CI checks and clean 5/5 review. Later master syncs incorporate upstream changes. Their checks remain separate from these pinned live measurements. | Check | Result and source-pinned report | | --- | --- | | Subscription protocol roster | [39/39 first attempts; 206 assertions](https://d1p6rlowie26tp.cloudfront.net/runner-protocol-evals/campaigns/gha-36046839612-1/index.html), runtime `bc6833f7`, evals `92bb4b8c` | | API protocol roster | [39/39 first attempts; 206 assertions](https://d1p6rlowie26tp.cloudfront.net/runner-protocol-evals/campaigns/gha-35926577007-1/index.html), runtime `4a1061c8`, evals `3213dbec` | | Subscription full Product matrix | [16/16 first attempts; 144 assertions; cleanup passed](https://d1p6rlowie26tp.cloudfront.net/runner-e2e/campaigns/gha-36096908572-1/index.html), source `2d939a92` | | Subscription core repetitions | 18/18: tool use, planning approval, and Stop/resume each passed three times in local and Daytona profiles. The full matrix contains repetition one; [repeat two](https://d1p6rlowie26tp.cloudfront.net/runner-e2e/campaigns/gha-36104551060-1/index.html) and [repeat three](https://d1p6rlowie26tp.cloudfront.net/runner-e2e/campaigns/gha-36108100404-1/index.html) each passed 6/6. Total: 28 unique subscription attempts at `2d939a92`. | | API smoke and question continuation | [4/4 first attempts; cleanup passed](https://d1p6rlowie26tp.cloudfront.net/runner-e2e/campaigns/gha-36147315401-1/index.html), both environments at `2d939a92` | | Historical API Product coverage | [16/16 full matrix](https://d1p6rlowie26tp.cloudfront.net/runner-e2e/campaigns/gha-35875144860-1/index.html) and 18/18 core repetitions at `4a1061c8`; retained as measurements of that revision | | Native Daytona proof | Three subscription and three API MCP/permissions/resume runs passed at `bc6833f7`. Three expired-login admission and fenced refresh checks passed without inference. All test sandboxes were removed. | | Inspectable artifacts and UI | Current-source screenshots verify planning approval, direct Ask completion, question continuation after controller restart, and two downloadable project revisions. The project downloads pass 12 and 18 tests; all 40 independent artifact oracle checks pass. | | Provider-free checks | 116 eval-validator tests, 39 Grok definitions, and 359 enabled/external campaign cells pass. Continuation regressions above 2 MiB and 16 MiB failed before their fixes; 32 focused recovery/ownership/size checks pass. | The 32 unique current-source Product attempts have no failures, retries, or skipped cells, and all cleanup checks pass. Whole-workflow timing, model identity, image and provider-pack provenance, attempts, and accounting coverage are retained in the canonical reports. The report publisher's conservative `complete=false` flag is preserved; independent audits verify the exact selected source catalog and immutable result rows. Pins: Grok Build `1.0.13 (5e9a58528b76)`, ACPX `0.13.1`, ACP model `grok-4.7`. Linux binary SHA-256: `edf79521581bb5e6b95abef848491a6a742e860da3e237ebe86a280d30dce4c1`. Launcher SHA-256: `f0b698395a3704ed2ffaf84ea19bdb20c36c8a0a70b7c629c7b6ffe144e59e55`. Image: `ghcr.io/paperclipai/paperclip-daytona-runner@sha256:76b24edfd850219e949418b19e4ceba690e84d51d199ade426e484953329b5e9`. Image build source is `4196a4cd`, recorded separately from application source `2d939a92`; each campaign verifies the image signature and provider pack. Original failed campaigns remain available: [continuation bound](https://github.com/paperclipai/paperclip/actions/runs/36057718059), [scheduler/event capture](https://github.com/paperclipai/paperclip/actions/runs/36071063537), and [startup cleanup plus EC2 interruption](https://github.com/paperclipai/paperclip/actions/runs/36080870743). They retain their original grades. No Docker or Rust builds ran on the developer laptop for these follow-ups. ## Risks Merge packaging follow-up #14024 with this base before public release. The follow-up replaces the private Grok bridge package with a built-in launcher and makes the native binary an explicit sandbox prerequisite. Three separate, reviewed fixes are part of the tested integrated behavior: #13973 serializes task-run admission; #13977 captures complete event evidence; #13979 durably reconciles failed Daytona creation. Each has green CI and clean 5/5 review. Failed-create recovery has 277 plugin tests, 92 SDK tests, host-runtime recovery tests, and a real Daytona lost-deletion-receipt proof. The live proof uses a private file for journal persistence; database durability is covered by host tests. Worker death before delivery of a failure envelope remains outside that recovery mechanism. Subscription fixtures stage an authorized company login; interactive browser sign-in is not qualified. Local Product profiles ran on EC2 Linux. The temporary subscription credential was removed from the protected GitHub environment after all subscription audits, with absence verified. Runtime homes and refresh copyback remain ownership-fenced. Protocol results remain pinned to their original revisions; they are not relabeled as tests of the latest feature commit. New binary/model versions require qualification. Missing token usage and model cost remain unknown; runtime estimates do not establish a full bill. Automatic paid Grok scheduling remains disabled pending separate reviewed enablement. The 64 MiB bound can increase memory use for verbose sessions, and larger files still fail closed. No automatic legacy-agent migration occurs. ## Model Used OpenAI GPT-6 through Codex, with tool use and code execution. The exact serving model identifier and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-28 13:54:36 -05:00
DottaandPaperclip	96bf004a79	fix: use persisted state for lifecycle continuation and retry budgets (#13888) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Its control plane decides when a task can continue, wait, stop, or complete. > - Legacy continuation could change when an agent changed its wording without changing task state. > - Shared attempt counts also let repair and infrastructure retries affect each other's limits. > - This pull request uses persisted state and separate, bounded allowances for these decisions. > - If automatic repair stops, the task explains what happened and offers a guarded retry. > - Paired tests and real-provider evaluations verify that Stop, approvals, ownership, and spending limits remain authoritative. ## Linked Issues or Issue Description Related work: Refs #13761, Refs #11126, Refs #13610. These cover obsolete continuation dispatch and retry storms. Open and closed issues and PRs were searched for related lifecycle, continuation, and retry work. **What happened?** Legacy continuation depended on English wording and progress heuristics. Repair, failure retry, and productive continuation could consume shared counts. When bounded repair stopped, the task showed a technical recovery message without a clear next action. **Expected behavior** Persisted disposition and owned execution paths determine the next action. Missing disposition prompts bounded agent repair. Explicit work mode determines planning mode. Narrative changes and raw activity counts cannot replenish allowances. An exhausted repair shows a readable notice. An explicit retry checks current controls and preserves the assigned agent. **Steps to reproduce** Run `pnpm test:lifecycle-baseline`. The paired probes keep structured state constant while varying completion, planning, blocker, and progress prose. Run the explicit `lifecycle-baseline` and `continuation-accounting` Product E2E suites for real-provider coverage. In Storybook, open **Design previews / Recovery notice** to inspect the production component's normal, pending, acknowledged, unavailable, failure, and mobile states. ## What Changed - Hide the image attachment button, icon, and drop/paste hint in answer composers. Image paste and drop support remains available. - Merge current master and retain both browser regression sets. Use a production-stamped service worker in the offline recovery browser fixture. - Share one state-based legacy continuation decision across immediate, delayed, and recovered dispatch. Bind bounded repairs to their source run and episode. - Remove title and description wording from work-mode authority. Agents can still write requested plans in execution mode. - Persist separate failure-retry and productive-continuation counters. Disposition repair and resource waits cannot consume or reset those allowances. - Validate delayed repair identity, then recheck current gates before provider dispatch. Fence native startup cancellation. - Show **Agent needs attention**, a plain-language explanation, **Retry agent**, and expandable details in both task interfaces. Report request progress, acknowledgement, and errors inline. - Store typed recovery notice metadata. Recognize older active notices only through exact stored action and run IDs. Notice text never grants retry authority. - Use the existing recovery-action endpoint for retry. Recheck current action, status, owner, agent availability, dependencies, active runs, pending questions and confirmations, approvals, pause controls, and budget. Duplicate requests do not wake twice. - Add component, page, route, database, contract, and Storybook coverage. Keep the scenario inventory and executable evals here. Historical reports and snapshots live in the [commit-pinned paperclip-evals archive](https://github.com/paperclipai/paperclip-evals/blob/ce3e5afcd4a1184650f586a2b5b8be5874c66c8b/experiments/2026-09-lifecycle-authority/README.md). - Preserve unsaved project fields while the same project URL changes to its canonical alias. Do not reuse data across projects or companies. This separate fix addresses the repeated repository-editor browser failure without changing the browser test. - Keep the development service worker from intercepting Vite module reloads. Update the connection-intent browser fixture to record progress and completion through the agent API. ## Verification Merge preparation on September 25, commit `c1e8e4b7ddd9fbc4913ed55ce21b8e12906c2f97`: - Merged master `bd2030932` and resolved the browser test-list conflict by keeping both sets of regressions. - Deterministic lifecycle baseline: 1,090/1,090 assertions passed; no failures, skips, or missing selected evidence. Unit 423, runner 184, database integration 397, grading 86. - Browser support: 17/17 passed. The offline recovery test first failed with an unstamped development worker, then passed with the production stamp. Its assertions are unchanged. - Focused interaction UI and offline fallback tests: 19/19 passed. Verified the custom-answer composer in Storybook: no attachment controls or hint; entering an answer enables Next. - Recursive typecheck, production build, token gates, and diff checks passed. The worktree is clean. No new real-provider campaign was run. - Current CI and review: [Current PR CI passed](https://github.com/paperclipai/paperclip/actions/runs/36166011243): 55 successful checks and two optional Storybook skips. Greptile scored this exact commit 5/5. Hiding the question attachment controls is an intentional UI change; paste/drop remains available. Earlier recovery UI verification, commit `21be0fec0e90e86b6d662b8ee4831847cd041cdb`: - Recursive typecheck, production build, token gates, and diff checks passed. - Focused UI coverage: 338 tests passed across six suites (336 before the interaction guard, with the two affected suites rerun at 149 passed after it). Covers both task interfaces, the real page mutation, pending/error acknowledgement, stale state, and unavailable controls. - Recovery database integration: 352 tests passed before the interaction guard. The complete recovery-action and mutation-route suites passed 181 tests after it. The two new pending question/confirmation regressions failed before the fix and passed afterward, including resolved-interaction controls. Shared validator suite: 31 passed. E2E catalog suites: 34 passed. - Browser inspection passed for light/dark themes, mobile layout, expandable details, pending retry, acknowledgement, failure, and disabled retry. Storybook renders the production component; its request is simulated. - The broad local run hit two chat callback-order wait failures and was stopped after all CI unit/database/runner shards passed. Both local failures passed when rerun without the competing full-suite process. - CI exposed a repeated project-repository draft-loss race during canonical redirects. A new unit regression failed before the fix; all nine project-page tests now pass, including controls for other projects and companies. Both unchanged repository browser tests passed against a fresh local server. UI typecheck, production UI build, and token gates passed after this fix. - [Earlier PR CI passed](https://github.com/paperclipai/paperclip/actions/runs/36072486798) on `21be0fec0e90e86b6d662b8ee4831847cd041cdb`: 55 successful checks, two optional Storybook skips, and no failed or pending checks. The repository browser shard passed with the production fix. Greptile is 5/5 on this exact commit with no unresolved review threads. The PR is mergeable. Historical, source-qualified lifecycle evidence: - Lifecycle baseline: 1,074 assertions. Native session coverage: 447 tests. Product E2E support: 515 tests. Browser support: 11 tests. Full earlier verification is retained in the archive. - [Real-provider campaign: 8/8 passed, zero retries](https://d1p6rlowie26tp.cloudfront.net/runner-e2e/campaigns/gha-35881382080-1/index.html), source `e88d210417280140b44a36449027290adcb1aeaa`. Evidence and cleanup checks passed. This includes deliberately exhausted repair cases that correctly remain blocked; it does not mean every task finished Done. This campaign predates the recovery UI change. - Archive migration verified all 16 original JSON files byte-for-byte and all 24 checksum entries. App tests do not need private archive access. [Archive PR #27](https://github.com/paperclipai/paperclip-evals/pull/27) is merged. ## Risks - Agents that omit durable disposition receive at most two repair attempts by default. Prose-only completion exposes missing state rather than silently changing scheduling. - A retry is an explicit board action. The server rechecks current controls. A successful response confirms the task returned to To do; it does not claim that the provider has already started. - Existing notice metadata remains valid. Only older active notices with matching structured evidence receive the new UI. Historical notices without that evidence keep their existing rendering. No schema migration is required. - Old run records require conservative retry accounting. Tests cover old counters, alternating retry lanes, restarts, and exhausted repairs. - Historical snapshots require private `paperclip-evals` access. The app index retains public campaign links. Live campaigns qualify specific sources and scenarios; no new real-provider campaign has run for the recovery UI commit. > This fixes existing lifecycle and recovery behavior and does not duplicate planned core work. ## Model Used OpenAI GPT-6 through Codex assisted implementation, reasoning, code execution, and review. The exact serving model ID and context window are not exposed in this task. Historical real-provider evaluations used Codex model `gpt-5.6-sol`, separately from the implementation assistant. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-25 15:28:11 -07:00
DottaandPaperclip	18dac1e1ef	feat(connections): add experimental memory providers and remote MCP access (#13942) ... ## Thinking Path > - Paperclip manages AI agents and their work. > - Connections give agents governed access to external tools. > - Agents need durable memory across tasks and execution environments. > - Mem0, Zep, Supermemory, Cognee, and Honcho provide hosted memory tools. > - This pull request adds their setup flows behind an experimental toggle. > - It also delivers assigned MCP tools through the native remote Codex runner. > - Operators can connect a provider once and use the same governed tools locally or in Daytona. ## Linked Issues or Issue Description **Problem or motivation** The Apps catalog lacks a complete set of memory providers. Remote native Codex agents also need access to assigned managed MCP tools without receiving provider credentials. **Proposed solution** Add five memory connectors behind the disabled-by-default Experimental memory connectors setting. Use the existing connection setup and permissions UI. Default their tools to Allowed. Preserve company boundaries, operator permission changes, provider scopes, and audit attribution. **Alternatives considered** Direct provider credentials in each sandbox would duplicate setup and bypass the managed gateway. The remote runner instead uses its existing protocol channel to call the gateway on the server. **Roadmap alignment** This maintainer-requested experiment supports the Memory / Knowledge and Connected Apps roadmap areas. It adds provider connections without introducing a separate memory UI. Related connector authoring documentation is tracked in #13692; no duplicate memory-provider implementation was found. ## What Changed - Add provider definitions, official branding, and the experimental setting for all five providers. - Use OAuth for Zep and Supermemory, API credentials for Mem0 and Honcho, and a bundled Cloud API bridge for Cognee with no runtime downloads or subprocesses. - Default memory tools to Allowed and classify destructive actions explicitly. - Fix personal remote credential resolution and propagate provider tool errors. - Relay assigned managed MCP tools to remote native Codex through the runner protocol. Recheck current authority for each call and rotate stale tool contracts. - Add 21 Storybook states and complete OAuth walkthrough fixtures. - Document provider research, sanitized tool inventory, and live local and Daytona proof. ## Verification - Passed workspace typecheck: `pnpm -r typecheck`. - Passed production build: `pnpm build`. - Full local `pnpm test:run`: 13,273 passed, with failures from process/readiness timeouts under parallel load. Reran all 16 affected suites with one worker: 456 passed, leaving two macOS `/var` versus `/private/var` path assertions. Both passed with `TMPDIR=/private/tmp`. No test failures remain unverified. Latest-head remote CI passes all 54 checks (two optional Storybook jobs skipped). Greptile is 5/5 with no unresolved findings. - Latest Cognee gateway regression: 71 passed, including public deployment without a runtime host and immediate recovery after a provider error. Bundled bridge tests: 25 passed. - Browser setup and real agent tasks exercised all five providers. Mem0, Cognee, Zep, and Honcho have successful store/retrieve proof. - Supermemory now has scoped read/write consent. Local storage and real Daytona write, document read, and semantic recall passed; indexing completion was verified before claiming success. - All five providers were exercised through a real Daytona sandbox and its native runner MCP relay. Provider credentials remained on the server. The final bundled Cognee bridge also passed a fresh Daytona store/recall run. All disposable sandboxes were removed and verified absent after testing. - Storybook is rebuilt and contains the experimental toggle, catalog, setup, permissions, and error states. The Zep and Supermemory access steps advance correctly. ## Risks - Provider OAuth scopes and plan limits remain independent of Paperclip tool permissions. An Allowed tool can still be rejected by the provider. - Providers can queue memory indexing; save acceptance does not prove that semantic recall is ready. - Remote tool contracts must stay synchronized with current connection authority. Regression tests cover revocation and stale contracts. - This change has no database migration. Existing connections remain usable when the experimental catalog toggle is disabled. ## Model Used OpenAI Codex, GPT-6 Astra (`gpt-6-astra`), with reasoning, repository edits, code execution, and browser automation. The exact context window size is not exposed in this session. Live acceptance agents used `gpt-5.6-sol`. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-24 15:54:38 -05:00
DottaandPaperclip	a6448cd060	fix(runner): tolerate Codex account notifications during active turns (#13902) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The Rust runner connects task runs to Codex app-server sessions. > - Codex sends account notifications on the connection during authentication updates. > - These notifications have no task, thread, or turn identity. > - The runner treated a valid account update as an invalid task event and stopped the run. > - This pull request classifies account updates as connection information while preserving task identity checks. > - Sandbox images can also contain an older runner with compatible metadata. The server must compare its bytes before reuse. > - Slack conversations use the deployed runner and can complete when Codex refreshes account state. ## Linked Issues or Issue Description Related: #13853. That change fixes the supported Codex version range. This fixes a separate notification failure after the version check succeeds. **What happened?** An active Codex task stopped with `thread_binding_mismatch` when the provider emitted `account/updated` without a thread ID. Slack showed that the agent stopped before completing its turn. **Expected behavior** Connection-level account updates must not stop a task or acquire task authority. Account details must not appear in task output. **Steps to reproduce** 1. Start a task with the native Codex runner. 2. Emit `account/updated` during the turn, with `authMode` and `planType` but no thread ID. 3. Observe that the old runner rejects the notification and fails the turn. **Paperclip version or commit** Reproduced after #13853. The fix is based on `b648d8cdd`. **Deployment mode** Cloud staging with a remote Codex runner and a Slack chat connection. ## What Changed - Classify `account/updated` and `account/login/completed` as connection information. - Reject account notifications that contain execution identity fields. - Reuse the existing bounded diagnostic path without publishing account payloads. - Test both notification types during two consecutive turns. Preserve existing identity rejection tests. - Compare preinstalled sandbox runner bytes with the controller artifact. Stage the deployed binary after a mismatch, failed checksum, or timeout. Keep exact retained artifact reuse. ## Verification - `cargo test --release --locked -p paperclip-runner-core`: passed, 582 test executions; two existing ignored cases. - `cargo test --release --locked -p paperclip-runner-core --test codex_provider`: 89 passed; two existing ignored cases. - `cargo fmt --all` and `git diff --check`: passed. - Repository-wide `pnpm -r typecheck`: passed. Server typecheck also passed after the artifact-selection change. - Server executor suite: 456 tests passed, including preinstalled digest match, mismatch, checksum failure, and timeout. - Repository-wide Vitest and build are running. - Deployed `5648d90d5dd762c5a8b697face269f6eea9cd59d` to one staging stack and verified its serving SHA. - Retried the failed conversation through the Slack UI. The agent replied and the task completed. - Sent a fresh Slack mention asking which bots belong to the channel. Verified successful `slack_members` and `slack_user` calls, a successful run, and the delivered Slack answer. - Sent a follow-up in the same Slack thread without another mention. The agent returned the requested names from context, with one final reply. ## Risks - Only two known connection-level notification methods change behavior. Unknown authoritative methods and malformed or conflicting identities still fail closed. - An older sandbox runner now requires one upload when its bytes differ from the controller artifact. Remote OS and architecture checks still apply. - No schema, credential, permission, Codex version-range, or UI changes. The Codex minimum remains 0.149.0. ## Model Used OpenAI GPT-6 (`gpt-6-astra`) through Codex, with reasoning, code editing, terminal tools, and browser verification. The context-window size is not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-23 15:43:46 -07:00
DottaandPaperclip	f55759942b	fix(runner): accept compatible Codex releases from 0.149.0 (#13853) ... Keep the minimum fixed at 0.149.0 until a deliberate maintainer change. Accept stable versions below 0.157.0 separately from the reproducible install pin. Co-Authored-By: Paperclip <noreply@paperclip.ing>	2026-09-23 11:27:43 -07:00
DottaandPaperclip	7944ed3d97	fix(runner): preserve hire runtime safety and first-activity timing (#13852) ... ## Thinking Path > - Paperclip is the open source control plane for companies of AI agents. > - Native runner agents need governed tools, durable runtime state, and useful execution evidence. > - A first activity trace waited 53.467 seconds even though tool activity took 6.274 seconds; provider input arrived before the server API call executed. > - Native agents also need a safe way to hire teammates without asking the model to rebuild runtime configuration. > - This pull request separates the observed ACP input-stream window from the actual server `tool.execute` span and adds a server-owned native hire contract. > - The benefit is clearer latency evidence and safer native teammates with existing approval, auth, and company boundaries preserved. ## Linked Issues or Issue Description Related Daytona provenance work is in [#13814](https://github.com/paperclipai/paperclip/pull/13814). No duplicate public PR was found for this combined timing and native-hire change. **What existing behavior does this improve?** Native runner agents can use governed tools and request hires. The server did not expose a safe native hire operation that reused the caller's validated runtime settings. First-activity traces also mixed provider input timing with server tool execution timing. **Current behavior** A native hire must construct a separate runner configuration. Full configuration copying could expose paths, instructions, secrets, or sessions. Timing evidence could make a provider or MCP identity join appear proven when the trace did not contain that join. **Proposed behavior** The native `hire_agent` operation accepts identity and persona inputs. The server sends `adapterType: "paperclip_runner"` with `inheritRuntimeFrom: "caller"`, then copies only validated provider, model, permission, lifecycle, and bounded execution settings. It inherits and validates the default environment, derives the managed AI binding through existing normalization, preserves approval and permissions, and creates fresh child instructions. Caller secrets, paths, prompts, and sessions are excluded. Provider events now include the optional boolean `inputUpdated`, with Rust forwarding support. Timing evidence separately records the ACP input-stream window and the actual server `tool.execute` activity. It does not claim a provider or MCP join without matching evidence. **Reason and benefit** Native agents can hire teammates that start with the caller's approved execution policy. Operators retain company boundaries, auth rules, approval gates, and requalification. Reviewers can distinguish provider streaming time from server API execution time when diagnosing first-activity delays. **Breaking changes** None for existing hires or tool calls. `inheritRuntimeFrom` is optional and only applies to same-company native agent callers. Conflicting explicit runtime settings are rejected. The provider event field is optional for existing producers. ## What Changed - Added the native `hire_agent` protocol action, catalog entry, API contract, and runner authority checks. - Added `inheritRuntimeFrom: "caller"` validation and a closed native runtime inheritance allowlist. - Preserved managed AI binding normalization, default-environment validation, approval snapshots, permissions, requalification, and fresh child instructions. - Added provider `inputUpdated` schema support and Rust forwarding. - Added first-activity and server tool timing evidence with conservative identity-join handling. - Added route, authority, provider-event, sidecar, API, catalog, and Rust-focused tests. - Kept private Honeycomb links, raw traces, and local result paths out of this description. ## Verification Focused checks passed: - 458 timing/session checks. - 61 native hire inheritance checks. - 20 hire authority checks. - 1,741 API checks. - 106 catalog checks. - 54 provider sidecar checks. - 12 Rust provider checks. Live R2 and R3 each passed 45 checks across 6 runs (361,135 ms for R2). R1 stopped at missing Docker image setup. The final trace is available at https://ui.honeycomb.io/paperclip/environments/test/datasets/paperclip/result/BiMypLNvmiB?tab=traces. Latest-head CI passed all required build, typecheck, Rust, static, Vitest, serialized-server, workspace, chat, and E2E jobs. The focused local checks listed above passed; the broad local suite was not run before the live evaluation, while CI provides the full repository verification. ## Risks - Timing fields describe separate observed windows. They do not prove a provider or MCP owner without a valid trace join. - The inheritance allowlist must stay synchronized with native runner configuration fields. - Approval snapshots include resolved safe inherited settings and should be reviewed when native configuration fields change. - The focused local suite is narrower than the full repository suite; latest-head CI covers the broader repository checks. > Roadmap review: `ROADMAP.md` places this work within Paperclip's bring-your-own-agent direction. It extends existing native runner hiring and observability behavior. ## Model Used OpenAI GPT-6 (exact serving model ID is not exposed), with extended reasoning and repository tool use; GPT-5.6 Luna assisted with focused implementation and verification work. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-22 23:16:11 -05:00
Devin FoleyandPaperclip	be6f49a425	feat(runner): refresh shared coding harness runtimes (#13838) ... ## Thinking Path > - Paperclip runs agents through local adapters and the native runner. > - Both paths must use the same installed provider CLI. > - New models require current harness releases. > - The runner still pins Codex 0.153.4, Claude SDK 0.3.263, and OpenCode 1.18.29. > - Changing the image alone would fail the runner's exact version and executable checks. > - This pull request updates those dependencies, integrity checks, controller checks, and image pins together. > - Shared installations can then run the current models without a task-time download. ## Linked Issues or Issue Description Refs #13829, which updates model choices and reasoning controls. Searches found no open PR that updates these runtime pins. **Current behavior** The shared provider pack ships old CLIs. Claude Code 2.1.263 cannot run Opus 5.5, which requires 2.1.280. Remote controllers reject provider packs whose versions differ from their declared pins. **Proposed behavior** Use Codex 0.156.0, Claude Agent SDK 0.3.280 / Claude Code 2.1.280, and OpenCode 1.18.32 throughout the runner. Keep the reviewed ACP bridge patches and one shared CLI installation per provider. **Reason and benefit** Current harnesses support the new model IDs while preserving executable verification and remote provider-pack compatibility checks. ## What Changed - Update dependency overrides, the Codex ACP package patch, runtime profiles, and remote controller pins. - Verify the new Claude Linux x64 and macOS arm64/x64 executables and Codex Linux x64 executable against integrity-verified npm archives. - Refresh OpenCode version checks, fixtures, and the runner configuration label. - Refresh the eval image's Grok, Gemini, Kimi, Cursor, and GitHub CLI pins and archive hashes. Hermes remains current at 0.19.0. - Refresh the build-time lock digest from clean pnpm 9.15.4 resolution. Leave lockfile commits to repository automation. - Document model compatibility and the separation between CLI runtimes and patched ACP bridges. ## Verification - `pnpm -r typecheck` and `pnpm build` passed. - Rust workspace release tests passed. - Package/patch and OpenCode binary-materialization contract tests: 11 passed. - Real Codex 0.156.0 startup-ownership and paginated session-resume probes passed with isolated synthetic homes and no model turn. - Codex app-server `thread/start` preserved `gpt-6-sol` and `gpt-6-luna`; no `turn/start` was sent. An unauthenticated built-in catalog does not include those account-served entries. - Installed Claude integrity probes passed for `claude-opus-5-5` and `claude-fable-5-1`. - `pnpm --filter @paperclipai/paperclip-runner test:opencode:qualification` passed with the actual OpenCode 1.18.32 executable under Node 24 and Node 25. The loopback provider exercise covers health/version, session creation/read/delete, SSE, and a completed async prompt. - `pnpm check:token-gates` passed. - The targeted runner suite passed 130 tests. Three macOS failures in snapshot module lookup and OpenCode final-message selection also reproduce on the unchanged base; Linux CI will provide the platform check. - [Final Linux CI](https://github.com/paperclipai/paperclip/actions/runs/35798076399): all gates passed. Four jobs needed one retry after their CI workers received shutdown signals. The PR has 55 successful checks, two skipped checks, Greptile 5/5, and no unresolved review threads. - Changed runner configuration UI tests: 5 passed. - Full macOS `pnpm test:run` reached 13,094 passing server tests, 84 skipped, and 18 failures before the wrapper stopped. Failures involved skill-cache publication permissions, missing bundled connector skills in the worktree, and a conversation-reset timing case. The 10 cache permission failures reproduce on the unchanged base; both conversation-reset cases passed on a targeted retry. The wrapper did not reach its later workspace/serialized groups locally; Linux CI covers those groups. - The local Docker daemon did not respond, so no local Docker build was run. No billable model requests were made. ## Risks - Deploy the matching controller and provider pack together. Older controllers enforce their previous exact pins. - Current upstream CLIs can change behavior. Existing protocol tests and isolated real Codex probes cover the integration boundaries; authenticated model inference is not part of these checks. - ACP bridge package versions and executable digests stay unchanged because their executable bytes are unchanged. Only the underlying CLI/SDK dependencies move. - No schema migration. Revert the runtime and image pins together to roll back. ## Model Used OpenAI GPT-6 via Codex, with repository tools, code execution, and web research. The exact serving model ID and context window were not exposed by this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass for the changed surfaces and real-executable probes; full macOS-suite limitations are listed above - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-22 17:02:29 -07:00
DottaandPaperclip	3d78e3a4ec	fix(runner): keep warm sessions alive with managed GitHub access (#13815) ... ## Thinking Path > - Paperclip manages AI agents and their work. > - The native Runner keeps a live provider process between task turns. > - Managed GitHub access used a token tied to one run. > - A new run forced Paperclip to replace that process to replace its token. > - This PR gives the session a stable credential transport and binds each operation to the active run. > - The agent can keep its process while Paperclip checks current identity and grants. ## Linked Issues or Issue Description Follow-up to #13738. Related credential-rotation work: #11770 and #8208 use process replacement for other adapter credentials; this change applies to managed GitHub access in the native Runner. **What happened?** A configured GitHub connection forced a warm native provider process to close at each new run. The saved conversation survived, but the live process did not. **Expected behavior** Keep the warm provider process. Resolve GitHub access for the current run when each command starts. Deny access while idle or after the run ends. **Steps to reproduce** 1. Configure managed GitHub access for a native Runner agent with a warm session. 2. Complete a turn, then send another message to the same task. 3. Observe the provider process close with the reason `warm native session configuration changed`. **Paperclip version or commit** Reproduced on master `8326e33ad`. Rebased onto `e3d8fb087` before submission. **Deployment mode** Local and remote native execution, including the sandbox callback bridge. ## What Changed - Move configured native GitHub transport and launcher ownership from the run to the provider session. - Bind the broker only after the executor acquires session ownership. Clear that binding when the run exits. - Keep the shared live-run, identity, grant, and trust-policy checks for each credential request. - Reject wrong scopes, idle requests, and credential responses that arrive after their run binding changes. - Retire transport and launcher files with the provider session. Keep anonymous commands available if bridge startup fails. - Add red/green executor tests, real subprocess and callback-bridge tests, and database checks. Update the runtime documentation. ## Verification - Before the fix, both new local and remote warm-session reuse tests failed. - After the fix, 435 targeted tests passed across the executor, broker, launcher, token, and database suites. - A real long-lived test process kept the same PID and original environment across two runs, including through the production callback bridge on local test processes. - Server typecheck and TypeScript compilation passed. - Full workspace typecheck and build passed. Server typecheck passed again after the review fix. - The fallback-logging regression failed before the fix; all 9 broker tests pass afterward. - The exact chat sidebar browser scenario passed locally. The initial CI timeout showed failed Vite module downloads; all eight browser shards pass on the latest commit. - All 53 latest-head checks passed, including the full CI test matrix and security checks (two unrelated conditional checks skipped). - The duplicate full local test run was stopped after CI passed; it is not claimed as a completed local pass. Targeted local tests, workspace typecheck/build, and the browser scenario passed. - Greptile reviewed the latest commit at 5/5 with no unresolved findings. - No fresh paid provider or Daytona campaign has run for this change. ## Risks - The broker now lives as long as the provider session. Tests cover idle denial, late cleanup, late responses, shutdown, and failed startup. - Its in-memory authority does not survive a controller restart. Existing checkpoint and process-recovery rules still apply. - Raw GitHub credentials remain confined to individual command processes. The session transport token cannot select a different task, agent, company, or run. - No database migration or public API change. ## Model Used OpenAI Codex, GPT-6, with reasoning, terminal tools, and code execution. The exact serving model ID and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-22 13:07:13 -05:00
DottaandPaperclip	74a9730acb	fix: continue native agent chats after worker loss (#13813) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Agent Chat uses native workers to run Claude and Codex conversations. > - A worker crash leaves a cleanup hold because its provider did not acknowledge suspension. > - A new user message must not reuse that unverified session or repeat old tool calls. > - The existing continuation path can preserve history and start a fresh session, but local cleanup ownership remained held. > - This pull request verifies the stopped local owners and releases only their cleanup hold for a new user turn. ## Linked Issues or Issue Description Refs #13775. **What happened?** After a native worker crashed, both providers retained cleanup quarantine. A saved plan survived, but the conversation could not produce another answer. **Expected behavior** Once the old worker and provider process groups have stopped, a new user message can continue in a fresh session with the saved work and prior action history. **Steps to reproduce** Run the opt-in `agent-chat-qualification` suite with case `worker-crash-retry` on native Codex and native Claude. The fixture saves a plan, kills the exact worker through a Linux pidfd, releases a local read-only brief, and sends a new message. ## What Changed - Verify the exact local worker stop receipt, provider identity receipts, released leases, and retained state before retiring a native cleanup hold. - Recheck process liveness and state before admission. Keep the old run and durable session files intact. - Use the existing explicit conversation continuation path. Generic Retry remains blocked for cleanup quarantine, including on the old failed-run marker after a successful continuation. - Extend the live oracle to require a successful fresh session, correct predecessor context, unchanged plan, one original message, and one answer containing a reference introduced after the crash. - Add physical-proof and database-backed admission tests. Document the precise qualification scope. ## Verification - Live Product E2E: **2/2 passed**, **2/2 cleanup passed**, with real native `gpt-5.6-sol` and `claude-sonnet-5`, Chromium, server, database, and public APIs. - Core recovery proof source: `3592b04c2bc76e23795fcdf964720e38a409dc4d`. Suite definition version 8: `9867367994d81a0c726956d91f2c7fddab6417a12f41b5cef3f7e62f3be417da`. - [Core recovery campaign](https://github.com/paperclipai/paperclip/actions/runs/35741746990) · [Public evidence report](https://d1p6rlowie26tp.cloudfront.net/runner-e2e/campaigns/gha-35741746990-1/). - Both cells verify the real crash boundary, blocked generic Retry, unchanged saved plan, one original prompt, one fresh successor with predecessor context, and one run-attributed answer containing the post-crash reference. Billing coverage is partial because the crashed runs did not report complete usage; missing cost is not zero cost. - [Master baseline](https://github.com/paperclipai/paperclip/actions/runs/35737364443): both providers stopped at quarantine, with cleanup passing. - [Follow-up baseline without the fix](https://github.com/paperclipai/paperclip/actions/runs/35738638866): Codex produced a complete red result. Claude reached the same error, but its artifact upload was canceled. - [Complete Claude baseline with the same version-8 definition](https://github.com/paperclipai/paperclip/actions/runs/35740555177): red at cleanup quarantine, cleanup passed, source `6479a90c5754044356b39a9278b9a3e92ce8e55e`. - Earlier candidate attempts remain retained: [first](https://github.com/paperclipai/paperclip/actions/runs/35738449214) passed Codex and found a Claude fixture wait race; [second](https://github.com/paperclipai/paperclip/actions/runs/35740408065) exposed the normalized session-open receipt mismatch. Both corrections are in the final source. - Targeted server suites: 570 passed before the final two additional receipt regression cases. The physical-proof suite, including those cases, passed 46/46. Eval oracle and catalog: 40 passed. Server and Product E2E typechecks passed. - **All 54 PR checks passed on final head `db6f775df`**, including repository typecheck, build, tests, browser shards, and canary dry run. The canary job required one retry after its runner received a shutdown signal. On the earlier core proof head, two timing-sensitive tests passed in isolation and on a single CI retry. - Final UI regression checks: 5 passed; UI typecheck and token gates passed. Updated eval oracle/catalog: 40 passed; eval typecheck passed. - Final version-9 two-provider campaign: **2/2 passed, 2/2 cleanup passed**, including the browser assertion that the quarantined historical run never regains Try again. [Final campaign](https://github.com/paperclipai/paperclip/actions/runs/35747416013), source `db6f775dfff405e1514ec02fedb0450d42c7dad2`, definition hash `bf5abf1cc45cb6dad4e082fbf818b8fa0f4d8c282776a7e98762b22919eadab7`. [Final public evidence report](https://d1p6rlowie26tp.cloudfront.net/runner-e2e/campaigns/gha-35747416013-1/). Final screenshots and retained state inspected for both providers; cost coverage remains partial. ## Risks - Missing or conflicting stop evidence keeps the conversation blocked. This change does not kill an unverified process. - This qualifies new user input after local worker loss. It does not enable automatic replay, exact-session recovery, remote crash recovery, or native onboarding defaults. - Old action outcomes remain part of the continuation. A process exit is not proof that an action did not happen. - No schema migration or production prompt change. ## Model Used OpenAI Codex, GPT-6. The runtime does not expose a more specific model identifier or context-window size. Used reasoning, repository inspection, code editing, shell tools, and test execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-22 13:01:45 -05:00
3 people	3790ca2f13	fix(runner): repair approval and Stop races and eval infrastructure (#13750) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Runner tasks must continue after approval and stop when the user presses Stop. > - Live evals found races at approval delivery and provider startup. > - Browser readiness and CI setup errors also hid the actual task results. > - This pull request fixes those races and the related test infrastructure. > - Regression tests and saved live reports show which cases now pass. ## Linked Issues or Issue Description Companion eval definitions PR: https://github.com/paperclipai/paperclip-evals/pull/25 (AgentCore paused and provider/environment infrastructure). Related: #13741 now supplies the late-startup Stop fence and warm-attachment recovery; this PR retains that fence and extends startup tracking and regression coverage to both native backend paths. #13539 introduced queued approvals during active runs. #13738 fixes child assignment, task replies, and warm process continuity and is already in the base. #13291 concerns automatic continuation of interrupted legacy sandbox runs; this PR fixes native startup cancellation and does not change that recovery policy. **What happened?** An accepted service approval could wait after its source run stopped. Stop could return success before the provider handle existed. Work could then start after Stop, or a cancelled run could be recorded as failed. Some E2E tests also failed on unloaded browser content or irrelevant reply wording. Runner CI could fail before model work because of dependency or sandbox setup. **Expected behavior** Deliver each settled approval once after its source run stops. Do not start work after an acknowledged Stop. Preserve the audited cancellation. Test the intended product behavior with a ready browser and verified runtime dependencies. **Steps to reproduce** 1. Approve a service request while its source run is active. Let the run finish. Check that its result starts one continuation. 2. Delay provider startup. Press Stop before its handle is available. Check cancellation, then submit `/new`. 3. Run the browser, warm-workspace, and Stop-and-redirect cases from the linked report. **Paperclip version or commit** The branch includes master at `9d19f98b5`. The report records the original source for each focused attempt. **Deployment mode** Isolated local development instances and disposable Daytona sandboxes. ## What Changed - Deliver settled tool-action results for the exact company and source run during final cleanup. Keep the existing idempotent receipt and periodic recovery sweep. - Wait for startup to hand off its provider handle before acknowledging Stop. Reject first-turn admission after cancellation. Preserve a matching audited pending or acknowledged cancellation. - Wait for mounted task history and connector controls in browser tests. Record failure evidence. Grade workspace contents and process continuity separately from exact reply wording. Require each warm-turn marker once and in order, allowing surrounding prose. - Stop-and-redirect now checks that the source file exists and work is active before Stop. - Resolve target dependency locks in an uncredentialed CI job. Verify the lock artifact hash. Keep orchestration and publication on the trusted workflow revision. - Materialize the pinned OpenCode executable and configure the exact Codex executable's user-namespace profile before provider credentials are available. - Compress Daytona directory uploads with gzip. Preserve files, executable modes, symlinks, empty directories, and confinement checks. - Classify file-transfer RPC deadlines as infrastructure. Keep unrelated runner RPC failures visible. ## Verification - [Focused live report with screenshots and original attempts](https://pages.paperclip.ing/runner-reliability-20260921/): 14 of 15 selected Product E2E cases pass across the recorded revisions. Claude and Codex Stop → `/new`, Claude service approval, delegation, both hiring/reuse cases, and native Daytona warm continuity pass. - Two credentialed Runner smoke cases pass. These are not full protocol coverage. - E2E harness after the master merge: 429 tests pass. E2E and server TypeScript checks pass. - Daytona plugin: 239 tests pass, 6 skipped. Plugin TypeScript build passes. The compression test fails against the old code and passes with the change. - Runner backend/runtime regression group: 161 tests pass. Cancellation/startup selection: 26 tests pass. Approval delivery: 34 real-database tests pass. - Workflow security: 7 tests pass. Both edited workflows pass actionlint. Runner TypeScript and Rust builds pass. - After merging master, all 389 native executor tests pass, including both native backend paths and late startup after the Stop deadline. - Post-merge `pnpm -r typecheck` and `pnpm build` pass. The monolithic local `pnpm test:run` was interrupted to integrate master and is inconclusive. The [hosted CI test partitions](https://github.com/paperclipai/paperclip/actions/runs/35620461738) pass on `50a3e43822bcba1e0d07b1b45b0be91cbf9312da`. An unchanged sandbox callback schema test initially received HTTP 503. It passed five isolated local runs, its full local test file, and one failed-job CI retry. No assertion was weakened. ## Risks - Stop can wait for the bounded startup handoff. If it cannot settle, the existing pending-recovery state remains instead of a false acknowledgement. - Immediate approval delivery must remain idempotent across cleanup and recovery sweeps. Tests cover duplicate delivery and company/run boundaries. - The workflow changes still need hosted Linux verification. They retain the trusted workflow and credential boundaries. - Gzip reduces the observed provider upload from about 1.8 GB to 663 MB. It does not yet fix the remaining Claude Daytona transfer timeout. That recovery test never reached Claude, so recovery remains unverified. Use a matching image with the verified provider package preinstalled for the next recovery test; retain cold-upload coverage separately. - The report preserves diagnostic runs with missing source metadata and marks them as such. It does not claim a new full-suite pass. - This PR adds no new prompt policy or historical status reconciliation. ## Model Used OpenAI GPT-6 through Codex performed the primary implementation and review. The exact primary backend model ID is not exposed in this session. OpenAI `gpt-5.6-luna` assisted with bounded infrastructure work and verification. The agents used repository tools, code execution, and browser tests. The exact backend revision and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> Co-authored-by: OpenAI GPT-6 <noreply@openai.com>	2026-09-21 12:50:50 -05:00
DottaandPaperclip	9d19f98b50	fix: harden native chat recovery and add coordination evals (#13741) ... ## Thinking Path > - Paperclip helps people manage AI agents and their work. > - Agent chat uses native runner sessions to plan, delegate, and track that work. > - A user can press Stop while the native session is still starting. > - The server can acknowledge that Stop without dispatching it, then let the session submit a turn. > - This leaves chat recovery waiting for an execution that the user expected to stop. > - This PR waits for the startup handle, dispatches cancellation, and prevents a late startup from submitting a turn. > - New full-stack evals check the resulting records and outputs across Claude and Codex. > - Those evals also exposed missing ACPX readiness fields, unbounded polling, and an old-run identity check that rejected valid warm handoffs. ## Linked Issues or Issue Description **What happened?** Stop during native startup could record an acknowledged cancellation with `dispatched: false`. The provider could then begin work. A subsequent `/new` stayed queued. A remote Claude follow-up also exhausted the command journal while probing warm-session readiness: ACPX never returned the readiness fields required by the shared transport. Once readiness worked, attachment incorrectly compared the next run descriptor against the old run ID. The 25 ms polling loop could issue 4,800 commands during its two-minute wait, beyond the 500-command bound. The existing chat eval treated lifecycle logs as proof of an active provider turn, so it did not distinguish startup cancellation from active-turn cancellation. **Expected behavior** A Stop during startup must reach the pending session. A late session must not submit a prompt after Stop. Recovery must retain control when startup exceeds the bounded wait. Chat evals must check saved task state, document contents, worker identity, account binding, and duplicate effects. **Steps to reproduce** 1. Start a native Claude or Codex chat turn. 2. Press Stop after process startup is requested but before the provider turn starts. 3. Send `/new`, then send a fresh message. 4. On the affected base, cancellation can be acknowledged without dispatch and the reset stays queued. **Paperclip version or commit** The live Claude baseline reproduced this on `29d6b3509`. The branch also includes master commit `0f5fafe16`. Related work: #13678, #13686, #13693, #13291, #13738. A separate runner reliability branch also contains a startup-wait fix. Its overlap must be reconciled before merging; this branch additionally prevents prompt submission after a late startup. ## What Changed - Wait for a pending native startup before acknowledging a run-scoped Stop. Preserve the existing recovery error when that wait expires. - Keep a Stop guard on startup. Cancel a late handle before it can submit a provider turn. - Add regression tests for normal handle publication and publication after the Stop deadline. - Back off blocked warm-attachment probes. Keep the fast two-snapshot barrier, fail closed, and record changed blockers. - Add red/green tests for delayed readiness, persistent blockers, alternating readiness, and readiness near the deadline. - Publish ACPX readiness and blockers. Preserve the old authority’s event acknowledgement barrier; only settled sessions can proceed to attachment. - Bind warm ACPX descriptors to the validated next authority while retaining old-run event correlation until activation. Preserve session identity and provider profile checks. - Exercise two consecutive run rotations through a qualified fake sidecar, verifying checkpointing, provider identity, pre-activation rejection, and new-run work admission. - Separate startup and active-turn cancellation checkpoints in the browser eval. - Add 18 explicit native chat eval cells: 12 local and 6 Daytona cells across Claude and Codex. - Cover hiring and reuse through managed AI accounts, source-based review, current blocked-task status, request replay after a lost HTTP acknowledgement, server restart continuity, and Stop/reset continuity. - Use ordinary production agent instructions. Enable API tools only for the two coordination cases that need them. - Calibrate the matchers with invalid records and outputs. Require remembered context after restart and a structured status snapshot that distinguishes the current blocker from history and task status from active execution. Compare the public issue mutation contract and relationships during read-only reporting. Preserve before/after source records in failed eval evidence. - Fix the lost-ack browser harness and verify it against a real HTTP server. Check the chat composer after restart instead of waiting for an unrelated document lifecycle event. - Document the scope and limits of each case. ## Verification - The startup regression failed on the unfixed executor and passed after the fix. - `pnpm test:e2e:runner:typecheck` passed. - `pnpm test:e2e:runner:unit` passed: 424 tests in 37 files. - `pnpm exec vitest run server/src/services/native-runtime/native-session-executor.test.ts` passed: 385 tests. - [Baseline live campaign](https://github.com/paperclipai/paperclip/actions/runs/35608208868): Claude Stop reproduced the bug. Codex Stop and Claude hire/reuse passed. Codex delegation was blocked by provider capacity. - [Eval-only startup campaign](https://github.com/paperclipai/paperclip/actions/runs/35609479786): both providers failed as expected. Both persisted `dispatched: false` and left `/new` queued. - [First fixed campaign](https://github.com/paperclipai/paperclip/actions/runs/35610533706) on `c9e95797d`: 10/18 cells passed. Startup Stop passed for both providers. Failed cases exposed eval harness defects and remote continuity failures. All attempts remain available. - [Original workflows and stronger memory checks](https://github.com/paperclipai/paperclip/actions/runs/35611896649) on `c04324fab`: 9/12 passed. Reassignment, local restart memory, and startup Stop passed for both providers; Codex remote restart passed. Claude remote restart exposed the missing readiness contract. Two Codex planning cells hit provider capacity. - [Unchanged-model retry](https://github.com/paperclipai/paperclip/actions/runs/35613854548): Codex planning and backlog creation both passed. - [18-cell campaign with ACPX readiness](https://github.com/paperclipai/paperclip/actions/runs/35614586963) on `6a98ef743`: 16/18 passed, including all local/remote Stop and committed-send cases. Claude remote continuity exposed the next-authority check, now fixed. Codex hiring produced its checklist, but the runner redacted the requested marker after it appeared as “Tracking token: …”. That content-redaction policy is unchanged and remains an explicit limitation. - [Structured status grading](https://github.com/paperclipai/paperclip/actions/runs/35614954725) on `50448c228`: both providers passed on their first attempt, including cleanup. - [Complete read-only state grading](https://github.com/paperclipai/paperclip/actions/runs/35616089011) on `551e13892`: both providers passed. - [Final ACPX handoff and hiring retry](https://github.com/paperclipai/paperclip/actions/runs/35617045456) on `cbd637587`: all three Claude Daytona cases passed (restart continuity, active Stop/reset, and lost-ack replay). Codex hiring reproduced the content-redaction failure: the saved checklist contained `Tracking token: [REDACTED]` instead of the required business marker. All four cases completed cleanup successfully. [Published report](https://d1p6rlowie26tp.cloudfront.net/runner-e2e/campaigns/gha-35617045456-1/). The only subsequent commit adds the qualified-sidecar integration test; production code is identical to this live proof. - `pnpm test:e2e:runner:browser-support` passed: 5 browser tests without paid models. - Runner TypeScript typecheck passed. All 5 warm-readiness tests pass; two failed with the prior fixed-rate loop, and the late-readiness test failed before the pacing correction. - ACPX readiness and warm-identity regressions each failed before their fixes. All 292 runner-core Rust library tests passed. The qualified-sidecar integration test passes. Rust formatting is checked. - Status-grader regressions for misleading historical mentions and previously unchecked mutations each failed before tightening the oracle and pass now. - [Latest-head CI](https://github.com/paperclipai/paperclip/actions/runs/35617522307) passed on `a4093c8f1`: full build, type checks, test partitions, browser E2E, and native runner checks. Two unrelated tests initially failed (Sentry fixture release attribution and local-service fixture readiness); both passed locally together (35 passed, 5 optional SDK tests skipped) and on the failed-job retry. No changes were made to those tests. - Greptile reviewed `a4093c8f1` at 5/5; both earlier findings are fixed and all review threads are resolved. - The paid live suite is not fully green: the reproducible content-redaction case remains red. This is separate from the passing PR merge checks. No production content-redaction, prompt, model, or completion-policy change is included. - Managed-account hiring and review cases explicitly enable API tools; these do not qualify default new-user onboarding. ## Risks - Stop can wait up to 30 seconds for startup, then use the existing pending-recovery path. This does not prove that remote cleanup has finished. - Blocked warm readiness adds up to 750 ms between later probes with the two-minute remote budget, or about 32 ms with the default five-second budget. Ready sessions retain the short second barrier. - Paid evals can fail because of provider capacity or agent decisions. Each failure needs evidence-based classification. - The HTTP request replay case checks comment idempotency and duplicate effects. It does not prove replay safety for an ambiguous provider tool call. - The new suite is opt-in. It does not increase the default paid campaign. - No production prompts or model selection change. Review-handoff behavior and content-redaction policy remain separate product decisions. The latter can remove harmless business content that looks like credential syntax; the failing attempt is retained. ## Model Used OpenAI Codex, GPT-6, with repository tools and code execution. The exact deployment model ID and context window are not exposed in this task. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-21 10:35:38 -05:00
DottaandPaperclip	9f30eb10dd	fix: reduce chat latency and preserve managed session reuse (#13710) ... ## Thinking Path > - Paperclip manages AI agents and keeps their work attached to tasks. > - Chat connectors carry user messages and agent replies between a provider and those tasks. > - Each extra startup and context reset delays a reply. > - Managed account metadata was lost during adapter decoding, so compatible follow-ups started fresh. > - This branch fixes the reset and measures the remaining preparation, execution, and delivery costs. > - The changes must preserve account isolation, authorization, durable output, and recovery ownership. ## Linked Issues or Issue Description Refs #13699. The related service lifecycle work in #13410 and #13408 is separate; this branch focuses on task-bound chat response latency. **What happened?** Managed AI follow-ups started new provider sessions even after their configuration fingerprint stayed stable. The Codex codec removes unknown fields. The resume check then read the removed credential identity and treated it as a credential change. **Expected behavior** Compatible follow-ups resume the correct provider session. Changes to credentials, responsible users, permissions, or task configuration retain their reset behavior. **Steps to reproduce** 1. Use a Slack connector with a managed AI connection. 2. Send a message, then send a same-thread follow-up. 3. Inspect the configuration reset reason and the provider session identity. **Paperclip version or commit** Reproduced on `2a99de80ec52db01eead901f28323926ceaf3c1d`. **Deployment mode** Cloud staging with a native Codex runner. ## What Changed - Read saved credential identity before adapter decoding discards it. - Remove the internal credential identity from adapter-facing session params. - Test the real Codex codec and missing, changed, or unmanaged identity cases. - Preserve configured warm Codex runners and flush refreshed credentials after every turn. - Fence detached or closing session handles from successor credential ownership. - Stage current Codex launch credentials after restoring durable session history, uploading launch assets only once. - Reuse a runner binary already in the retained sandbox only when its SHA-256 matches the controller-owned artifact; still verify required capabilities before launch. - Lock the task before the run when saving results, preventing deadlocks with task updates. - Scope reusable projectless sandboxes to the company, environment, task, agent, and runtime configuration; verify Daytona sentinels for that scope. - Admit a new authorized chat message after a fully committed failed run and verified process cleanup. - Send compact deltas for verified plain-text Slack continuations. Match the actual prior run and current comment identity/body; exclude edited historical comments and prior agent output, preserve genuine brief edits and the full bootstrap fallback. - Keep attachments, omitted input, questions, approvals, recovery, and other providers on their existing framing. - Document managed session compatibility, credential lifecycle, and compact continuation boundaries. ## Verification - Workspace/session coverage: 156 tests passed. - Native session and credential ownership coverage: 390 tests passed, including exact artifact reuse, mismatches, failed probes, timeouts, and explicit artifact overrides. - Explicit continuation and durable chat authorization coverage: 172 tests passed. - Session resume and launch preparation coverage: 416 tests passed. - Result persistence coverage: 15 tests passed. The new concurrency test reproduced a PostgreSQL deadlock before the lock-order fix. - Environment lifecycle coverage: 92 tests passed, including projectless reuse and task/agent isolation at both selection and atomic handoff. - Daytona plugin coverage: 237 tests passed; 6 gated tests skipped. Standalone plugin build passed. - Compact Slack continuation and native resume coverage: 69 tests passed, including full-bootstrap retention, matching message authors/bodies, current-delivery selection, rejection of duplicate identities and historical comments, brief edits, and attachment/recovery fallbacks. - Final frozen-head `pnpm test:run` on repository-supported Node 26: 668 suites passed, 3 skipped, 1 failed; 12,797 tests passed and 82 skipped. The sole failure was a local `socket hang up` in `issue-recovery-actions.test.ts`, not an authorization assertion mismatch. All 57 tests in that suite passed three fresh reruns, and the suite passed latest-head CI. The full local invocation is therefore not claimed green. - An earlier Node 24 full run exposed an unrelated macOS symlink-cleanup failure; that 11-test catalog suite passes on Node 26 and in CI. No test behavior or timeout was relaxed. - Full local typecheck and build passed. Latest-head CI is green; Greptile is 5/5 with no unresolved review threads. - Two real Slack baseline replies took 25.1 and 24.6 seconds (24.9-second mean). Three same-thread signed probes on this head took 23.8, 23.9, and 22.7 seconds (23.5-second mean). This is a small sample and a modest wall-clock improvement, not a large or statistically established speedup. - In that same thread, uncached provider input fell from 8,514 tokens before compact input to 694–765 tokens afterward. The current delivery uses a 362-character delta; the full 19–21k-character bootstrap remains available for failed resume. Verified runner artifact preparation fell from about 1.2 seconds to 0.6 seconds. - A fresh thread created a separate task, sandbox, and provider session with full bootstrap (24.4 seconds). Its follow-up reused its own sandbox/session and compact input (28.3 seconds, including 16 seconds of model execution). Model variability and process startup remain substantial. - A signed duplicate webhook produced exactly one user comment, one successful run, and one final Slack reply. Slack's API independently confirmed the actual replies and a public task URL without an internal or pool hostname. - Earlier signed probes verified recovery after a failed run and reuse across a server deployment. The final idle test observed Daytona report the sandbox as stopped, then delivered a new reply in 19.9 seconds using the same sandbox/provider-session identity and compact input. Slack’s API confirmed that reply. - Live probes use signed synthetic inbound webhooks and real outbound Slack delivery, read back through Slack’s API. The final browser recheck found the Mac locked and the Slack tab blocked by another extension, so this is not claimed as full UI E2E proof. - This is a review branch. Do not merge until the maintainer reviews it. ## Risks - Incorrect session reuse could mix account or task context. Missing or changed identities continue to reset, and existing authorization checks remain in place. - Warm mode remains opt-in. Remote warm mode requires a reusable sandbox lease. Retained processes keep credentials until they close, so idle expiry and ownership fences are required. - A fresh user message may continue after a committed provider failure. Approval, current authorization, process termination, and prior-result checks remain required. - Projectless sandbox reuse is task- and agent-scoped. Missing or mismatched ownership cannot replace an existing lease; existing workspace-scoped leases keep their scope. Opt-in reuse retains a sandbox per task/agent, so provider auto-stop and deletion policies still determine idle compute and storage costs. Fleet defaults are unchanged. - Compact prompts apply only after proven resume and a matching prior-run delta. Missing or specialized context falls back to full input; fresh sessions always receive the full bootstrap. - No schema or migration changes. ## Model Used OpenAI GPT-6 through Codex, with code editing, tool use, and test execution. The exact serving model ID and context-window size are not exposed by this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [ ] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-20 13:12:44 -05:00
DottaandPaperclip	7bc03e0acd	feat(runner): default harnesses to full auto and support task reassignment (#13686) ... ## Thinking Path > - Paperclip lets people manage AI agents and their work. > - Agent Chat uses native runners to save plans and coordinate tasks. > - Provider defaults differed across harnesses and could stop unattended work at a second permission gate. > - Agents also lacked a dedicated tool to move existing work to another agent safely. > - This change defaults native providers to full automatic permission for provider tools and connected tools. > - A guarded reassignment tool preserves task identity, stops the previous run, and schedules the new owner once. > - Codex and Claude chat acceptance tests now use production permission defaults. ## Linked Issues or Issue Description **Subsystem affected** Native runner, ACPX Claude permission policy, task authority, and Agent Chat acceptance tests. **Problem or motivation** A user can authorize an agent to save a plan or create a task, but Claude's default provider gate can still stop that action. Reassignment needs a dedicated operation that preserves context and avoids concurrent owners or unintended recovery runs. **Proposed solution** Default Claude/ACPX to `approve-all`, OpenCode to `allow`, and Codex to `never`. Apply the defaults at configuration, execution, fresh-session, resume, driver, and proxy boundaries. Keep explicit permission settings and server-side company, claim, task-mode, and approval checks. Add `reassign_task` with version checks, durable idempotency, audited cancellation, and guarded successor scheduling. **Alternatives considered** A Paperclip-only allowlist still blocks provider tools and other connections during unattended work. Full automatic permission is the requested product default. Recreating a task discards its identity and history. Updating assignment without stopping the previous run can leave two agents working on the same task. **Roadmap alignment** This extends the existing planning, delegated work, governed tool access, and recovery features. It adds no new service or schema migration. Recent related tasks and open PRs were checked for duplicate work. **Additional context** Related: #13678 (Agent Chat tools and recovery), #13677 (remote runner startup). The stacked legacy-adapter companion is #13693. This also fixes the deployed-server artifact fallback needed to stage the current runner binary. ## What Changed - Default Claude/ACPX to `approve-all`, OpenCode to `allow`, and Codex to `never`, including missing settings at direct driver and proxy entry points. These defaults cover provider tools and connected tools. Preserve explicitly configured restrictive modes. - Include assigned approval reads using canonical side-effect classifications, so verifying a recorded approval does not trigger another provider gate. Paperclip approval decisions still enforce controller authority. - Carry the new permission mode through server configuration, execution contracts, recovery identity, TypeScript, and Rust. Keep `approve-paperclip` as an optional restricted mode, with exact SDK rules and closed unknown requests. It is not a default. - Add `reassign_task` to the semantic catalog, controller, mock authority, and generated contracts. - Guard reassignment with company authorization, expected owner and version, protected-state checks, and durable retry receipts. - Honor explicit backlog task creation atomically with the initial plan, without scheduling a wake. Preserve backlog holds regardless of dependency readiness. - Stop active work before changing ownership. Restore the prior owner through a guarded, idempotent wake if final handoff validation fails. Keep intentional reassignment stops out of failure recovery. Preserve backlog and blocked states without waking them early. - Add authorization, concurrency, replay, stop, and permission boundary regressions. Add Codex and Claude chat reassignment cases and run native chat cases with production defaults. - Clarify shared runner guidance: save plans and Paperclip documents directly with `write_document`; create and register a local file only when a downloadable file is requested. - Document provider defaults and the operator choices for existing agents. ## Verification - Current head `d82fbb0f03546d27cecf072250e4172e0b1ee662`: **55 checks passed**, with two intentional skips. [PR checks](https://github.com/paperclipai/paperclip/pull/13686/checks). - Greptile reviewed that exact head at **5/5**. The security reviewer acknowledged the intended full-auto default, and the acknowledged discussions are resolved. - Full workspace `pnpm -r typecheck` and `pnpm build` passed locally after rebasing onto current master. Targeted adapter/server, runner, API, default/resume, and heartbeat configuration tests passed. - **All six real-provider acceptance cases passed on their first attempt, with cleanup passing:** plan handoff, task reassignment, and backlog creation/status, each on native Claude and Codex. Evidence records Claude's effective `approve-all` mode. [Campaign and downloadable evidence](https://github.com/paperclipai/paperclip/actions/runs/35469926548). - The live campaign tested combined revision `a37881c824dcd7170380fc4b788732fc743e5da7`. The final PR heads add only a heartbeat test expectation correction; application code is unchanged from that live-tested revision. - The campaign's result-enforcement job passed. Its separate report publisher failed because the trusted workflow's `patchedDependencies` configuration differs from its frozen lockfile. All six results and screenshots remain available as GitHub artifacts. The overall manual workflow is red for this publishing failure. - Full-suite coverage is supplied by the passing CI partitions. The separate unsharded local run was stopped after the corresponding CI partitions passed; it is not counted as a completed local run. - Reassignment tests cover stale state, cross-company access, denied authority, cancellation failure, compensating wake, and idempotent retries. Backlog tests verify the original creation audit, saved plan, exact task count, and absence of task-bound runs. ## Risks - Agents with no explicit permission mode now receive full provider tool permission, including connected tools. This is a deliberate broad default. Existing explicit restrictive modes still apply. Controller authorization, company isolation, workspace boundaries, and Paperclip governance remain in force. - Reassignment crosses run cancellation and task ownership transactions. Durable stop intent, revalidation, audit receipts, and guarded queue dispatch cover interruptions and retries. - The new permission enum requires a current runner artifact. The remote artifact fallback uses the same resolved controller binary for upload and execution. - Live provider behavior remains subject to the selected model. Targeted live results do not qualify the full catalog. ## Model Used OpenAI Codex, based on GPT-6, with code execution and repository tools. The exact deployment model ID and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-19 16:49:18 -05:00
DottaandPaperclip	04546c82d5	fix(runner): reconnect Daytona sessions after controller restart (#13691) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The native runner can execute a task inside a Daytona sandbox. > - The sandbox can keep running when the Paperclip controller restarts. > - Recovery treated sandbox process IDs as local process IDs and selected the wrong recovery path. > - Live verification also found races between startup, shutdown, and queued task cleanup. > - This pull request verifies the existing remote owner and orders those transitions. > - Users can continue the same task and provider session after a controller restart. ## Linked Issues or Issue Description **What happened?** The Daytona `recover-controller` cases failed with `runner_state_identity_mismatch`. Remote process IDs can be absent on the controller or collide with unrelated local processes. Recovery then looked for remote state in the local runner directory. Later turns could also start before the previous executor released its sandbox resources. **Expected behavior** Reconnect to the original sandbox and authenticated runner. Preserve the task, provider session, and queued comments. Reject a replacement sandbox or mismatched identity. Do not start another provider during reattachment. **Steps to reproduce** Run the `everyday-workflows` `recover-controller` case for `runner-codex` or `runner-acpx-claude` in Daytona. The browser creates a Python tool, requests a revision, restarts the controller during execution, and queues another revision. It then downloads and tests the final ZIP. Related: #13682 is the preceding operational fix. #13291 addresses legacy sandbox conversation recovery, a different execution path. #13666 includes broader run-capacity work; this change guards cleanup of an existing native task executor. ## What Changed - Add remote runner recovery without interpreting sandbox PIDs on the controller. - Verify the original provider lease, remote workspace, durable state, process marker, and authenticated PRP authority before adoption. - Compare the process marker with live Linux boot identity and start ticks to reject PID reuse. Read virtual proc files through the guaranteed Node runtime; unavailable proof blocks adoption without blocking a fresh launch. - Make the E2E supervisor own the actual server process so forced restart cannot leave a late database closer behind. - Scope the chat delivery lease test to its own fixture instead of draining other tests’ pending deliveries. - Preserve provider-attempt counts and recorded evidence during reattachment. - Serialize an idle-session checkpoint with admission of the next native turn. - Wait for an in-progress startup to acknowledge restart detachment. Fail after a bounded deadline if it cannot. - Keep a queued comment waiting until the previous native task executor releases its resources. Allow unrelated tasks to continue. - Update the Daytona image's resolved lock digest to match current dependency manifests. - Add classifier, ownership, process, startup, checkpoint, and queued-admission regression tests. Document recovery behavior. ## Verification - 415 focused tests passed across native execution, restart recovery, workspace synchronization, queued admission, and real-process restart tests. The final Node-based fingerprint change passed all 375 native-session tests. - Runner harness unit tests: 394 passed. Chat integration shard 2: 335 passed after fixture isolation. - The exact fingerprint command succeeded twice in a disposable Daytona sandbox and returned the same identity; the sandbox was deleted. - 11 real-process restart integration tests passed, including absent and colliding remote PIDs. - Repository typecheck and final build passed. Broad local checks found machine-dependent database startup and timing failures; focused retries passed. The final-revision PR pipeline is green. One unrelated browser shard hit a five-second blank-page timeout on the first run and passed its targeted retry. - Final-revision local headed browser E2E: `everyday-workflows.runner-acpx-claude.daytona.recover-controller` passed on attempt 1 in 4.7 minutes, **40/40 checks**. Manual browser inspection confirmed Done, all three ZIPs, and delivery of the queued follow-up. All three runs succeeded using the same provider session. The harness downloaded and independently tested the final artifact. - Final-revision Daytona campaign: https://github.com/paperclipai/paperclip/actions/runs/35463999611 — **Codex passed first attempt (4.8 minutes); ACPX Claude passed first attempt (6.1 minutes)**. Campaign aggregation/publication is finishing; both test jobs succeeded. - Greptile reviewed `beb08d8493b3286f5bb988dead369ff8c96a395d`: **5/5**, no open findings. - Staging browser verification is pending selection of a disposable staging instance and removal of a Chrome extension UI block. ## Risks - Recovery now depends on the original sandbox remaining available. A replacement or mismatched identity still blocks adoption. - Shutdown waits up to 30 seconds for a native startup to reach a safe detach point. An unfinished startup returns a clear failure instead of a false detach receipt. - Queued native work on the same task waits for cleanup. Unrelated tasks remain eligible. - The image digest update rebuilds the Daytona runtime image. No database migration or public API change is included. ## Model Used OpenAI Codex, GPT-6, with repository inspection, code execution, and browser tools. The runtime does not expose the exact deployed model ID or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-19 16:13:34 -05:00
DottaandPaperclip	c1f6c3310a	fix(runner): repair catalog runtime and grading boundaries (#13676) ... ## Thinking Path > - Paperclip manages tasks across persistent agent sessions. > - The full Runner E2E catalog exposed failures in session restoration, tool validation, and test controls. > - These failures prevented valid work from resuming or made a valid interaction fail the test. > - Invalid completion reports also reached finalization before the provider received useful feedback. > - This pull request repairs those boundaries without changing production prompts or approval policy. > - Focused regressions and fresh paid cases verify each fix. ## Linked Issues or Issue Description Follow-up to #13655. Stacked on the trusted worker prerequisite fix in #13674. **What happened?** Read-only skill uploads failed in resumed Daytona sandboxes. Invalid criterion IDs escaped tool validation. A progress event could park a run before its tool response settled. Partial question forms hid required answers. Two test assumptions rejected valid plan keys or failed to navigate an optional question page. **What did you expect to happen?** Resume identical skill bundles, give repairable feedback for malformed completion calls, preserve in-flight tool responses, show all required questions, and test the rendered workflow accurately. **Steps to reproduce** Inspect the failed cases in https://github.com/paperclipai/paperclip/actions/runs/35417932353. Fresh campaigns: https://github.com/paperclipai/paperclip/actions/runs/35444497313 and https://github.com/paperclipai/paperclip/actions/runs/35445327618. The later backup cleanup is tested in https://github.com/paperclipai/paperclip/actions/runs/35446477285. Combined report: https://pages.paperclip.ing/runner-e2e-operational-35444497313/investigation.html. ## What Changed - Compare immutable archives before reusing read-only Daytona bundles. Reject corrupted content and preserve unrelated files. - Validate exact criterion IDs before accepting completion. OpenCode returns a tool error instead of emitting a result that terminates runnerd. - Complete the activity item for rejected OpenCode calls. - Remove retired read-only harness backups without altering live files or following symlinks. A fresh paid rerun exposed this later checkpoint-cleanup failure. - Exclude progress messages from the governed-wait completion boundary. - Reject newly created question forms that omit questions or contradict their stored answer semantics. Keep historical rows readable. - Navigate all rendered question pages and recognize revision-bound descriptive plan keys in the continuation suite. ## Verification - Harness unit suite: 383 tests pass. Harness typecheck passes. - Native session executor and status corpus: 381 tests pass. - Shared question and interaction-service tests: 42 pass; native question bridge and executor: 360 pass. Daytona sync: 21 pass, including foreign-owner archives and corrupted immutable content. - OpenCode driver: 29 tests pass, including wrong, missing, and duplicate criterion IDs followed by a valid retry. - Repository typecheck and build pass. The later OpenCode activity fix also passes its package build. - The latest commit passes all 52 PR checks and Greptile 5/5. The backup-cleanup fix also passes 351 related local tests and server typecheck. Local full-suite coverage completed across runs. adapter-auth-signal-routes and pipelines-routes encountered transient socket resets; both pass on retry, and all remaining 24 serialized files pass. Paid reruns are complete: 27 of 29 unique cases pass using the latest recording per case. Both Daytona controller-restart cases still fail with runner_state_identity_mismatch; the report describes this remaining runtime issue. Eight affected cells need #13674 on master before their rerun. ## Risks Creation rejects inconsistent dual question representations but does not change historical records. Immutable bundle comparison must verify bytes before skipping extraction. Completion feedback must use the contract bound to the current run. Durable suspension and approval checks remain enforced. Production prompts are unchanged. ## Model Used OpenAI GPT-6 via Codex, with repository inspection, code editing, and test execution. The exact API model ID and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-19 09:27:48 -05:00
DottaandPaperclip	9335b7db10	fix(runner): validate inherited environments and replace stale sandbox binaries (#13677) ... Resolve the effective environment for account adoption and adapter tests. Preserve saved-agent overrides when the request omits environmentId, and treat explicit null as inheritance from the instance. Reject sandbox runners that lack unlimited-runtime and connection-lease-renewal capabilities. Stage the bundled runner before launch when the image binary is stale. Add regression coverage for environment precedence, fail-closed validation, adapter switches, API-key reverification, and runner artifact fallback. Document the operational workaround for older controllers. Co-Authored-By: Paperclip <noreply@paperclip.ing>	2026-09-19 08:51:18 -05:00
DottaandPaperclip	43acbcc398	fix(runner): preserve sessions and complete question and approval continuations (#13655) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The native runner connects task state to provider sessions. > - Follow-up turns must retain provider memory and carry new user direction. > - Lost session IDs caused repeated context and extra input tokens. > - Native question answers and approval races could leave valid work blocked. > - This pull request repairs those paths and adds regression coverage. > - Agents can continue accepted work without repeating the conversation or losing the user's answer. ## Linked Issues or Issue Description Refs #13574. That merged PR shortened continuation prompts and moved question instructions into tool documentation. This change preserves sessions and fixes failures exposed by broader testing. Related runtime work: #13408 and #13410. **What happened?** Native follow-up turns could lose the provider session ID. Completion guidance could replace the original task with its latest comment. Claude native questions could remain pending after the user answered. Approval during a running tool call could suspend the run before the tool response arrived. Onboarding and chat handoff instructions also caused repeated planning or missing plan documents. **Expected behavior** Reuse a valid provider session. Send only new events when that session already has the history. Preserve the task requirements and apply later user direction. Store the question answer and deliver it to the waiting run. Finish governed tool responses before suspending. Execute the accepted plan without asking for the same approval again. **Steps to reproduce** Run the continuation, local-session-integrity, first-task, and agent-chat suites with native Codex and Claude. Include provider-question-bridge, accept-while-running, and plan-handoff. **Paperclip version or commit** This branch is based on master d54b75011. The active full catalog run tests 4e75881db. Later review fixes have separate regression coverage. **Deployment mode** Isolated local instances and Daytona sandboxes in the existing Runner full-stack E2E harness. ## What Changed - Retain provider session identity across turns and late usage snapshots. Send new continuation events on session reuse, with full context available for a fresh session. - Preserve task requirements and later direction in completion guidance. Return the current contract revision after a stale completion submission. - Bridge native Claude questions to saved Paperclip cards. Submit answers through the saved card and resume the same run. - Delay governed suspension until tool results settle. Add a deterministic test barrier for approval during an active run. - Clarify free-text question examples, explicit onboarding plans, and execution of accepted chat plans. - Fix continuation readiness, verified output evidence, and declared screenshot collection. - Qualify the legacy Claude test CLI at 2.1.277. The old 2.1.19 CLI did not discover mounted skills. Update the existing workflow pin and isolated launcher together. - Refresh the Daytona image lockfile integrity pin after reviewing master patch updates. - Carry continuation mode as runtime metadata instead of inferring it from user-visible text. Install the test Claude CLI without lifecycle scripts. ## Verification - Targeted paid verification: 20/20 cases passed across local-environment campaigns before the rebase. [Report](https://pages.paperclip.ing/runner-e2e-seven-fixes-35397904249/). - Harness checks: 379 unit tests passed; harness typecheck passed. - Latest-head PR checks: 55 passed, two intentionally skipped. Greptile is 5/5; the security scan passes. - Review regressions: 350 executor tests and 204 session/driver tests passed. A script-free Claude install was verified with the actual CLI. - Full catalog, including the explicit-only everyday suite: [run 35417932353](https://github.com/paperclipai/paperclip/actions/runs/35417932353). Completed: **164/205 passed; 41 failed**. [Full dashboard and failure investigation](https://pages.paperclip.ing/runner-e2e-full-catalog-35417932353/). Includes 204 case artifacts and one pre-case GitHub authorization timeout; missing evidence is not scored as a pass. The full run tested `4e75881db`; Final-head metadata/CLI smoke cases both passed. In the separate [six infrastructure retries](https://github.com/paperclipai/paperclip/actions/runs/35419769343), the GitHub timeout case passed and all five Docker preflight failures repeated. [Follow-up dashboard](https://pages.paperclip.ing/runner-e2e-full-catalog-35417932353/follow-up/). - Full local typecheck and build passed on the rebased branch. The full local unit run completed with 657 passing files, two test timeouts and one suite setup timeout. All three affected files passed when rerun in isolation (84 tests). The first full local run was not clean. - Focused regression coverage includes the live question bridge, same-run response delivery, UI routing, stale revisions, approval overlap, and session reuse. ## Full-catalog follow-ups - Test infrastructure: 14 Claude everyday cells probe an absent host CLI; six cells failed pre-task GitHub/Docker qualification (GitHub passes on retry; all five Docker cases repeat; the workflow preflight allowlist omits their case IDs); five ACPX Codex cells cannot create sandbox namespaces. - Runtime: four OpenCode completion-criteria mismatches masked by shutdown errors, one service-approval suspension failure; three Daytona recovery failures encounter existing skill files; one duplicate completion wake. - Confirmed test defects: question pagination and a noncanonical plan document key. - Product/behavior: mismatched visible/required question sets, an attachment instead of the requested task document, one lone-option onboarding question, early completion instead of review, and a Codex Mini completion-schema failure. - The report job itself fails on trusted master’s stale patch/lock configuration. The linked report is rebuilt with the shared renderer from original cell results and public fixture screenshots; it excludes private snapshots, logs and traces. These are investigated follow-ups, not silently regraded passes. First-task passed 51/52. The PR checks are green independently of the broader catalog’s behavioral/infrastructure failures. ## Risks - Session reuse depends on a valid provider identity and context coverage. Fresh-session fallback and reset tests cover this boundary. - Native question delivery spans saved interaction state and a live provider run. Tests cover duplicate events, closed runs, and same-run answers. - Provider behavior varies. The full paid catalog may expose failures beyond these targeted fixes; those results will be reported without relaxing valid approval or output checks. - The legacy Claude version update is limited to test infrastructure. No database migration is included. ## Model Used OpenAI Codex, GPT-6 family, with repository inspection, code execution, and browser/E2E tools. The exact runtime model identifier and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass (targeted checks and all three timeout-file reruns pass; full-run timeout caveat above) - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-19 07:42:57 -05:00
DottaandPaperclip	84fe89906d	fix: complete native agent review handoffs (#13581) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Native execution uses durable runs, issue locks, wake requests, and typed tool authority > - A child can finish with a native agent review request while its original assignee stays responsible for the work > - The reviewer then needs a bounded execution path that can inspect the child, record one decision, and finish safely > - Before this change, assignee-only gates rejected the reviewer or left the parent waiting after the child review ended > - This pull request adds typed reviewer admission, scoped reviewer tools, durable wake and recovery handling, and parent continuation evidence > - The benefit is that native review handoffs complete without changing child ownership or granting broad mutation access ## Linked Issues or Issue Description Refs: #13314 Refs: #13574 **What happened?** A native child run could report `needs_review` for an agent reviewer. The reviewer wake then failed assignee and execution-lock checks. The child remained in review and the parent remained waiting. **Expected behavior** The named reviewer should receive one durable wake. The reviewer should inspect the child and resolve the exact review card. The child assignee should stay unchanged. The parent should receive the recorded review outcome after the child reaches its terminal state. **Steps to reproduce** 1. Run a native task with a different named agent reviewer. 2. Keep the child assigned to its original worker. 3. Let the worker finish with a native completion review request. 4. Start the durable reviewer wake. 5. Resolve the review and finish the reviewer run. 6. Observe the child and parent state. **Paperclip version or commit** Base: `e926b1301`. PR head: `b31ad9ab8`. Live reviewer verification source: `eea171aae`. **Deployment mode** Built from source. **Installation method** Built from source (pnpm build). **Agent adapter(s) involved** Not adapter-specific (core bug). **Access context** Both. **Database mode** Embedded PostgreSQL in the isolated live test fixtures. ## What Changed - Add server-validated native review assignment facts. - Admit only the exact company, issue, source run, decision, revision, addressee, and resolver policy. - Give reviewer runs a narrow set of Paperclip read and resolve tools. File and shell access follow the configured agent and environment policy, so reviewers can run tests. - Separate server-owned reviewer instructions from untrusted persisted review data. Escape the data boundary; retain server-enforced authorization. - Keep the child assignee unchanged. Atomically claim the reviewer run, wake request, and issue execution lock. A competing lock prevents provider startup. - Require the exact running reviewer session and current issue lock to resolve its assigned card. Reject missing, unrelated, or terminal reviewer runs. - Add durable reviewer wake, lock, stale-card, and abandoned-run recovery handling. - Prevent duplicate native wake dispatches during deferred admission and recovery. - Carry accepted or rejected child review outcomes into parent task context and continuation evidence. - Add focused server, runner, and native protocol coverage. - Preserve upstream continuation rules. Add child review decisions as separate evidence, while keeping real human answers in their own field. - Return actionable completion validation feedback to both providers. Permit a corrected completion after rejection. Keep strict terminal acknowledgment validation. - Apply exclusive shared-workspace locks to sandbox environments. Local and SSH folders can run concurrently, including when old settings request serialization. - Repair test timing, native event parsing, and the review artifact assertion. Allow a valid reject, correct, and accept review sequence. Check the accepted card against its reviewer run and decision. Keep polling within the existing deadline when review acceptance precedes the parent wake projection; report a specific missing-continuation error at timeout. - Apply the ACPX pending-call limit to reserved finish/block calls, with capacity-release and cancellation tests. ## Verification - `pnpm build`: passed on `eea171aae`. - `pnpm -r typecheck`: passed on `eea171aae`. - `pnpm test:e2e:runner:unit`: 359 tests passed in 30 files on `b31ad9ab8`; runner E2E typecheck also passed. - `pnpm check:token-gates`: passed. - Focused DB review, reviewer authority, and prompt-boundary checks: 31 tests passed. They cover invalid reviewer runs, competing locks, atomic admission, duplicate claims, and valid resolution. - Heartbeat, workspace, and recovery checks: 30 tests passed. - ACPX sidecar suite: 27 tests passed. Moving the capacity guard back below reserved handling makes both new regression cases fail. - Four focused live continuation checks passed on their first attempt at `f15f55e0a`: answer updates scope (6/6 each on Codex and Claude) and question tool guidance (12/12 each). These cases do not use the reviewer prompt path changed afterward. - Fresh Codex and Claude review-handoff checks passed all 29 native checks each on their first attempt at `eea171aae`. Both runs received the expected fixed prompt and completed cleanup. Only the six selected live flows were tested; no full paid provider catalog run. - The final commit only extracts the existing test-harness timeout diagnostic into a shared helper and adds positive and negative coverage. Removing the accepted-review guard makes two regression assertions fail; restoring it passes all six timeout tests. Production runtime code, prompts, deadlines, and grading criteria are unchanged by this final commit. - Deadline regressions: a valid continuation delayed 20 seconds succeeds within its 30-second unit-test deadline; an absent wake returns a specific candidate-failure diagnostic at that same deadline. Both assertions failed before the fix. Production E2E deadlines remain unchanged. - Historical native failures remain recorded: Docker availability failures; a valid reject/correct/accept sequence that the first-card grader misread; and a test that rejected the gap between accepted child review and parent wake projection. No failed result was regraded. The latest tests use a protected reference to the pinned Docker image and the unchanged artifact oracle and time limits. - Full repository verification runs in GitHub CI. Local verification uses the focused suites above, full build, and full typecheck. An unchanged Codex shutdown timing test failed once in CI, passed in isolation, and its full shard passed on the final commit without changes to that test or its causal code path. The original failure is retained in the verification record. Greptile reviewed `b31ad9ab8` at 5/5 with no outstanding actionable findings. All review threads are resolved. All current-head CI gates passed, including the isolated native runner Docker build (55 successful checks; two skipped by the workflow). ## Risks - Reviewer admission depends on exact persisted decision and interaction bindings. A stale or changed card is rejected. - Paperclip control-plane tools are limited to inspection and review resolution. This is not a filesystem permission boundary; provider file and shell access retain the configured policy. - Deferred wake recovery changes dispatch receipt coalescing. A scheduler regression could delay a continuation if the receipt state is wrong. - Parent review outcomes are evidence for the model. They do not grant tool authority or change issue ownership. - This change does not address legacy lease-hold handoff behavior. > Roadmap review: native execution, review gates, and durable recovery are existing roadmap capabilities. This PR completes a narrow reliability path for those capabilities. ## Model Used OpenAI `gpt-6-astra` with reasoning, tool use, and code execution. OpenAI `gpt-5.6-luna` assisted with bounded implementation, review, and journal work. Context window size is not exposed by this session. Live test subjects use `gpt-5.6-sol` and `claude-sonnet-5`; they are not the PR authors. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-17 15:52:19 -05:00
Nicky LeachandPaperclip	c276d3fdc3	feat(observability): report terminal run failures to Sentry (#13446) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The server records the state of each agent run. > - Terminal run failures need clear error tracking for operators. > - The server did not report terminal `failed` or `timed_out` transitions to Sentry. > - This pull request reports each genuine terminal failure transition with safe diagnostic data. > - The benefit is faster diagnosis without changing run control flow or exposing credentials. ## Linked Issues or Issue Description **What happened?** The server wrote terminal run failures but did not report them to Sentry. Operators could not see these failures in error tracking. **Expected behavior** The server should report each genuine transition to `failed` or `timed_out` to Sentry. **Steps to reproduce** 1. Run an agent task that reaches a terminal failure state. 2. Inspect the Sentry events for the server. 3. Observe that the terminal run failure has no matching Sentry event. **Paperclip version or commit** The change targets the current `master` branch. No public GitHub issue or pull request covers this change. ## What Changed - Add `captureRunFailure()` as a fail-open Sentry entry point. - Add `reportRunFailure()` to filter status, resolve the adapter, redact text, and report the failure. - Call `reportRunFailure()` beside each of the eight terminal status writers. - Report six diagnostic values: the instance host, task identifier, run identifier, error message, error code, and agent adapter. - Group events by error code and agent adapter while keeping the redacted message in the event. - Report only genuine transitions and avoid duplicate finalization events. - Keep Sentry failures outside run control flow. ## Verification - `pnpm vitest run server/src/services/__tests__/run-failure-report.test.ts server/src/__tests__/run-failure-sentry.test.ts server/src/__tests__/native-session-resumption.test.ts` - `pnpm vitest run server/src/services/execution-control-reconciliation.test.ts` - `pnpm --filter @paperclipai/server typecheck` - The full continuous-integration suite must run on this pull request. ## Risks - The report path can add diagnostic events when Sentry is configured. - The report path returns without action when Sentry is not configured. - Redaction runs before length limits and before the event leaves the process. - The change has no migration and no schema change. ## Model Used OpenAI Codex, GPT-5, tool use and code review support. The exact context window and reasoning configuration are not exposed by the runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-14 23:32:15 -07:00
DottaandPaperclip	78ce96a48b	fix(runner): restore native Claude context and read permissions (#13422) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The native runner supplies each agent with instructions, assigned skills, and tools. > - Native Claude lost its skill snapshot before provider launch. It also changed exact model IDs to aliases. > - The read permission mode denied ordinary Paperclip reads because this runner has no interactive approval handler. > - This pull request restores the missing context and permits only assigned tools that Paperclip defines as reads. > - Other requests that need approval stop with a clear action for the operator. They do not retry automatically. > - Agents can complete read tasks. Users can see why a restricted task stopped. ## Linked Issues or Issue Description **What happened?** Native Claude could not find assigned skills. The ACP layer could replace an exact model ID with an alias and then fail identity verification. The default `approve-reads` mode denied Paperclip read tools. A denied write showed a generic transport failure. The tool descriptions also called live operations “mock” operations. The completion prompt said to call a completion tool once, although the protocol can reject a claim and require a corrected call. **Expected behavior** Load assigned skills before launch. Keep the selected model ID. Allow assigned Paperclip reads. Stop an operation that needs approval with clear instructions when no approval handler exists. **Steps to reproduce** 1. Configure a native Paperclip Runner agent with ACPX Claude and an exact model ID. 2. Assign a skill and ask the agent to use it. 3. Select the read permission mode and ask the agent to read task context and list documents. 4. Ask the agent to write a document. Check the task state and recovery message. **Paperclip version or commit** Reproduced from `d351e08deee1b49d3467a950d1a3f01131943441`. **Deployment mode** Local native runner with real Claude, Rust runnerd, the Paperclip server, and embedded PostgreSQL. Related: #13196 fixed remote skill staging in the legacy `claude_local` adapter. The native runner uses a separate path, which this pull request fixes. ## What Changed - Carry the runtime context through Rust and the ACPX sidecar. Load assigned Claude skills after the provider lifetime lease is held. Refresh the files on each open. - Write the exact requested model ID into the isolated Claude settings. - Grant exact MCP permissions for the intersection of assigned tools and Paperclip's read catalog. Provider hints cannot grant access. Existing task-control permissions stay in place. - Stop requests that need an unavailable approval handler. Preserve the typed error through the server. Show “Approval required” on the task and require operator action without automatic retry. - Label the setting “Allow Paperclip reads.” Remove “mock” from live tool descriptions and regenerate the contracts. - Change one completion-prompt sentence to require one accepted result. Add regression tests and update the runner documentation. ## Verification - Red/green regression tests cover read admission, unavailable approval handling, server recovery, and the task error message. - A real Claude read trial failed before the fix and completed after it: [red trace](https://www.braintrust.dev/app/Paperclip/object?object_type=project_logs&object_id=fda74078-b00d-495a-90d3-ea1be019d71b&id=95e6a326e24437f1), [green trace](https://www.braintrust.dev/app/Paperclip/object?object_type=project_logs&object_id=fda74078-b00d-495a-90d3-ea1be019d71b&id=85a1f347db5604d1). - Full browser tests used real Claude and the production tool authority. Reads completed. A write stopped with “Approval required.” No document was created and no automatic retry was scheduled. All nine checks passed: [events and screenshots](https://www.braintrust.dev/app/Paperclip/object?object_type=project_logs&object_id=fda74078-b00d-495a-90d3-ea1be019d71b&id=1c4ff10be0d779cc). - A separate full browser test assigned a skill, invoked it, and completed with a marker absent from the task prompt: [skill evidence](https://www.braintrust.dev/app/Paperclip/object?object_type=project_logs&object_id=fda74078-b00d-495a-90d3-ea1be019d71b&id=ba5fbcb29a60be52). - Post-rebase checks passed: 128 targeted runner tests, 46 Rust tests, 27 sidecar/protocol contract tests, `pnpm -r typecheck`, and `pnpm build`. The server/UI red-green checks and `pnpm check:token-gates` also passed. The full suite passed in CI, including all general and serialized test shards, all three browser shards, and runner `check:all`. The duplicate unsharded local full-suite run was stopped after CI passed. Braintrust links require project access. The traces contain provider/runner events and app outcomes. They do not contain raw model HTTP requests. ## Risks - `approve-reads` now allows assigned Paperclip reads. Other operations that need approval stop the turn. Users must review the operation and change permissions before retrying. - The Claude settings depend on the pinned ACP and SDK behavior. Automated tests and real Claude trials cover this boundary. - The native Codex path is unchanged. The ACPX Codex fallback shares the clearer approval failure handling. - Local execution was tested end to end. Remote execution was not run. This change has no database migration. ## Model Used OpenAI GPT-6 through Codex. The agent used reasoning, code execution, and browser tools. The exact deployment ID and context-window size were not exposed in the session. Live acceptance tests used `claude-sonnet-5`. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-14 10:56:24 -05:00
DottaandPaperclip	f2c5e54dca	fix(runner): preserve handoff work and publish requested files (#13355) ... ## Thinking Path > - Paperclip lets people manage AI agents and their tasks. > - A task keeps its instructions, progress, and files when its assigned agent changes. > - The replacement runner lost the interrupted run's context and could overwrite an existing draft. > - A saved message also stayed attached to the former agent and could reopen the task after the replacement finished. > - File tasks could report Done with only a local path that the user could not open. > - This pull request transfers handoff context and saved messages, and makes requested files accessible through the existing attachment contract. > - Users can change agents and collect completed work without repeating instructions or confirming bookkeeping. ## Linked Issues or Issue Description Refs #13338. Builds on merged #13354 for queue admission and #13353 for remote workspace retry. #10123 concerns restricted recovery-model escalation; this change instead covers ordinary native handoff and file completion. **What happened?** Codex wrote a draft before a user assigned the task to Claude. The replacement lacked continuation context and replaced the draft. A queued user message could later restart the former agent and reopen the completed task. Separately, a runner could finish a requested file but return only a machine-local path. Remote native runs had no bound file publication tool. **Expected behavior** The replacement reads and preserves existing work, receives saved messages once, and keeps each message's author. The former agent stays stopped. A requested file has a working attachment or accessible work product before Done. Text-only tasks do not require attachments. **Steps to reproduce** 1. Ask Codex to save three newsletter names and then wait. 2. Queue an instruction to keep those names and expand the draft. 3. Use Interrupt and assign to select Claude. 4. Verify the original names survive, the result has a working download, and only the source and replacement runs exist. 5. Ask either provider for a Markdown checklist and open the file from its completed response. ## What Changed - Carry the exact same-task interrupted run's summary, semantic receipts, and history into handoff context. Tell the replacement to inspect existing files before editing. - Adopt saved ordinary task comments into the successor's receipt under the task lock. Preserve authors and separate mention, chat, and interaction contracts. - Prevent a former-assignee comment wake from reopening a completed task or starting a stale execution. - Reject workspace-only, fabricated, and cross-task file completion references with actionable runner feedback. New file output also needs a matching current-run publication receipt and asset filename/size/hash, or an accessible work product registered by the current run. Prior output can remain context alongside a current file, or be verified and re-registered internally. Authorized chat attachment reuse retains its verified current-run clone receipt; older receipt shapes require an intact matching source. - Bind remote file reads to the active environment runner and reuse the existing attachment and work-product publication path. - Enforce workspace confinement, regular single-link files, stable identity, a 10 MiB limit, and exact size and SHA-256 checks. Rotate the native session fingerprint for the updated tool contract. - Contain rejected remote signals and protocol-failure cleanup, including logging failures. Preserve the original cleanup rejection for its owner; a rejected operation never supplies stop acknowledgement or cleanup proof. - Allow exactly one maximum-size base64 file through the native SSH command adapter, preserving a finite output cap. - Document handoff and accessible file completion rules. ## Verification - Each observed bug has a failing regression before its fix. Final post-rebase integration passed 732 tests across 13 files before the final receipt and signal guards; final affected results are below. - Publication provenance and compatibility: 8 provenance regressions and 2 compatibility regressions failed before their fixes; the final four affected suites pass 53 tests, including mixed old/new references and real authorized chat reuse. Controls cover old attachments and work products, filename/size/hash/origin mismatch, missing/wrong receipts, current-run publication, same-run durable proof, internally re-registering preserved bytes, and no-new-file follow-ups. - Remote signal rejection: the real Node subprocess previously exited 1 when the production launcher signalled a deleted sandbox. It now stays alive for both a failed signal and failed logging; all 349 executor tests pass. The failed signal still provides no termination proof. - Remote file reader and SSH command boundary: 33 tests passed, including real Linux descriptor reads and the actual SSH adapter subprocess output cap (network executable replaced by a deterministic fixture). Exact 10 MiB bytes pass, one byte beyond the encoded cap fails. - Live local Claude and Codex Stop journeys preserve the saved file, deliver queued instructions once, and reach Done with two total runs. The handoff journey preserves the original names and download with exactly two runs. Both local providers deliver exact checklist files without a completion confirmation. - Live combined Daytona verification passed: the original failed task's Retry reused its sandbox; a selected Git subfolder produced an exact downloadable file; warm and deliberately resumed Claude runs took about 33 seconds. Codex produced a 240-byte download in 33.1 seconds after 134 seconds of contention/backoff. Both cloud downloads retained exact bytes after the two owned sandboxes were deleted. - The sandbox-deletion retest identified a separate ignored promise in protocol-failure cleanup. Two real Node subprocess regressions failed under fatal unhandled-rejection policy before the fix; all 36 protocol, lifecycle, and integrity tests now pass. The original close promise still rejects to its owning runtime. The final live retest passed: a normal Claude Daytona task completed in 132.352 seconds, then its sandbox was deleted. Thirteen samples over 361 seconds confirmed the same controller stayed healthy, the task stayed Done with unchanged run IDs, and its attachment retained exact bytes. The post-deletion browser download passed with zero page errors; all five owned sandboxes are confirmed absent. - Full repository typecheck and build passed on final commit `de64d16f1`. Final-head Greptile is 5/5 with no unresolved threads. [Final-head CI](https://github.com/paperclipai/paperclip/actions/runs/34736623758) passed: 32 successful checks and two conditional skips. The earlier mixed-source full local test invocation was deliberately stopped before rebase, so no pristine green full local aggregate is claimed. Its known failures passed in later affected suites. ## Risks - Handoff may adopt only ordinary comments from its validated former owner. Other delivery contracts must remain independent. - File verification fails closed if a remote file changes during reading. The runner must retry publication or explain a blocker. - The updated session fingerprint starts a fresh provider process where needed to install the new tool contract. - No schema migration or historical status reconciliation is included. ## Model Used OpenAI `gpt-6-astra` through Codex, with reasoning, code execution, browser testing, and tool use. The context-window size is not exposed in this task. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-13 08:41:20 -05:00
DottaandPaperclip	6809314a3f	fix: recover sandbox workspace setup and retries (#13353) ... ## Thinking Path > - Paperclip manages AI agents and their tasks. > - Sandbox tasks need a workspace and a provider session before work can start. > - A selected Git subfolder is a valid workspace, but it is not a repository fetch source. > - A resumed sandbox must keep one resource identity when the provider fills in its region. > - Workspace reuse does not prove that a provider session has started. > - A recorded continuation must not leave an old failure blocking Retry for a newer attempt. > - This pull request fixes those setup and recovery boundaries while preserving ownership checks. ## Linked Issues or Issue Description **What happened?** A Daytona task failed before provider startup when its project folder was inside a parent Git repository. After the folder was repaired, Retry resumed the same sandbox and verified its workspace sentinel, but workspace preparation reported that the lease was no longer active. A later attempt could fail because the resumed workspace had no provider checkpoint. The old run also kept a recovery projection after the server recorded its explicit successor, hiding Retry for the new failure. **Expected behavior** Sync the selected folder without importing parent files or history. Keep the existing sandbox identity stable. Allow a new provider session only with proof that its exact session has never started. Let the current failed attempt retain Retry once the old recovery has a recorded successor. **Steps to reproduce** 1. Select a subfolder of a Git repository as a project workspace and start a Daytona task. 2. Leave the target region unset. Release its reusable sandbox after setup fails, then resume and realize the workspace. 3. Retry a provider setup that failed before any session directory or checkpoint was created. 4. Record an explicit successor for a native failure, fail that successor during setup, and inspect Retry in the task thread. **Paperclip version or commit** Reproduced against `8d1f0c20a` with new failing regressions before each production fix. **Deployment mode** Local controller with a Daytona environment. Automated tests use deterministic provider fixtures and real filesystem operations. Related: #13338, #13163, #13264, #13349. The open work-folder stack in #13264 includes a broader fresh-session authority change. This patch addresses the independently reproduced startup failure with existing durable bootstrap proof and atomic directory creation. It does not include the work-folder migration or credential changes from that stack. ## What Changed - Classify only the selected Git repository root as a fetch source. Sync subfolders as directories and preserve their enclosing Git ignore rules on upload and restore. Recognize the shared scheduler’s completed non-repository result so ordinary folders still sync; timeout, cancellation, and output-limit failures remain closed. - Remove the placement target from Daytona account cache identity. Keep API endpoint, credential digest, company, environment, driver, and sandbox ID boundaries. - Preserve closed-lease admission until a sentinel-verified resume reopens that same resource. - Show the already-recorded explicit successor of a resolved recovery. Keep the old failure evidence and unresolved holds. No historical status writes occur. - Permit a resumed workspace to create a new session directory only with matching durable identity, zero connections and events, untouched bootstrap commands, no backup, and an absent remote session. Claim the directory atomically. Existing, partial, or ambiguous state still blocks startup. ## Verification - Final head `c43c7403f`: [CI completed successfully](https://github.com/paperclipai/paperclip/actions/runs/34733846820/attempts/2), with 32 successful checks and 2 conditional skips. This includes every server, UI, package, serialized-route, browser, native-runner, typecheck, and build gate. Greptile reviewed the same head at [5/5 with no unresolved findings](https://github.com/paperclipai/paperclip/pull/13353#issuecomment-5650270168). - New regressions failed before each of the four production fixes. Git/archive/restore suites: 148 passed. The scheduler-wrapped non-Git regression also failed before its fix; 135 affected Git/sync/Codex tests then passed. - Daytona plugin: 230 passed, 6 opt-in live tests skipped. Native executor, projection, and TaskChatThread: 494 passed, including existing/partial state, wrong identity, prior connections or turns, backups, unavailable proof, and unresolved recovery controls. - Local full-repository typecheck, build, and token gates passed on the final head. Local CLI: 485 passed. Complete single-worker package rerun: 3,224 passed, 19 skipped. - Local verification is an aggregate with recorded retries, not one pristine green invocation: the general-server run began on `e721a920a` and finished with 12,002 passed, 3 failed, 70 skipped. Its real Codex scheduler failure is fixed above; the socket and workspace-runtime timeout failures passed unchanged in focused reruns. Both Inbox failures passed unchanged in the full 27-test Inbox file; database/shared-package failures passed in the single-worker package rerun. The supplemental local serialized-route rerun remains in progress; all five corresponding final-head CI lanes passed. - The first final-head CI attempt hit a Daytona fixture-readiness race and a signoff-browser heartbeat receipt timeout. One supported unchanged failed-job rerun passed both and the aggregate gates. Live combined user-journey verification is tracked in the related follow-up; this PR's provider tests use deterministic fixtures and real filesystem checks. ## Risks - A selected subfolder uses directory sync and does not carry parent Git history. Its ignored files stay local. - The target region remains a creation setting and part of workspace reuse policy; it does not split the account identity of an existing sandbox. - Incomplete or conflicting provider state still fails closed. This change does not erase a session, infer completed work, bypass a user decision, or replay uncertain actions. - A later remote setup failure can leave a claimed partial session directory. It remains blocked rather than being overwritten. ## Model Used OpenAI GPT-6 through Codex, with reasoning, repository tools, and code execution. The exact hosted model ID and context-window size are not exposed in this task. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-12 22:19:42 -05:00
DottaandPaperclip	422287eecd	fix: preserve runner recovery, warm sessions, and task outcomes (#13338) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The native runner connects task messages, provider execution, and task outcomes. > - First-time user tests exposed gaps in recovery, completion permissions, message delivery, and Stop behavior. > - These gaps left usable output hidden, completed work waiting for bookkeeping, or safe work unable to continue. > - This pull request fixes the shared lifecycle and receipt paths while preserving process ownership and action checks. > - Users can continue work with accurate task state and durable messages. ## Linked Issues or Issue Description **What happened?** A stopped local Codex execution could remain blocked even after its processes had stopped and its complete transcript proved that no external action needed replay. Claude under Conservative permissions could fail to call task completion tools. Recovery could reuse an assistant item ID and overwrite prior output. A delivered comment could remain marked uncertain after navigation. Stop could look like Pause or a new recovery incident. Workspace contention could look like cancellation. A direct reply reopening Done could enter a clarification loop. **Expected behavior** Recover automatically only with verified termination and complete action receipts. Preserve answers and messages. Keep task completion available under Conservative permissions without broad tool access. Show crashes as Blocked, actual human decisions as In Review, and ordinary workspace contention as waiting. Stop the current response and allow a new direction. **Steps to reproduce** 1. Create ordinary response tasks with local Codex and Claude Code, then send follow-up messages through the task composer. 2. Interrupt a disposable local Codex runner during text-only work. Verify automatic continuation and retained output. 3. Stop a response, send a new request, answer a clarification, and reopen completed work with another message. 4. Navigate or reload while a comment submission is pending. Confirm the exact persisted request receipt settles it without removing newer draft text. 5. Run two tasks in a shared Daytona workspace. Confirm waiting does not appear as failure. **Paperclip version or commit** Initial acceptance baseline: `c9021c6721f91e2c74bd9fee9d3fd41c999d17b7`. Current integration base: `6cef9743c`. Both operator-interruption and workspace-waiting guards are preserved; native restart and legacy permission rules remain documented. **Deployment mode** An isolated source-built test-drive instance, with real local Codex and Claude Code providers and disposable Daytona environments. Related work: #13314, #13316, #13327, #13344, #13239, #13254, #13163. This PR addresses additional failures from ordinary task journeys, including controller restart handoff and repeated warm sandbox setup. Historical task status reconciliation is excluded. ## What Changed - Persist runner ownership immediately at spawn and resume an explicitly adopted runner even when the controller crashed before the first driver checkpoint. Detach the controller safely across graceful restarts, including session startup. Prevent an old finalizer from suspending or signaling an adopted runner. Checkpoint idle warm sessions before shutdown. Preserve the same run and queued follow-up messages. - Scope saved legacy queue successor checks to the queue owner while preserving ordinary task locks, operator identity, assignment gates, and exactly-once delivery. - Preserve managed Codex credential files when an old session is detached for restart; normal owned cleanup still copies refreshed auth back and removes the scoped copy. - Reuse the bound warm shared sandbox and fully verify an existing staged provider pack before using it. This avoids repeated uploads when the pack is already valid. - Add a narrow local Codex replacement path with stopped-process proof, a closed transcript inventory, exact completion receipts, and fresh-session lineage. Preserve no-replay holds when evidence is incomplete. Recovery may clear only the same run's recorded Blocked status version; manual re-blocking and dependency changes invalidate that receipt, while queued comments do not. Later blocks stop scheduled, queued, and final dispatch; queued/final checks re-read dependencies even when the task status stays In Progress. - Permit only task delivery and human-input tools through the isolated Claude runner's exact task bridge. - Scope assistant item identity to the provider turn and ignore only authority-free Codex skill-change notifications during startup. - Reconcile composer submissions by client request ID across response loss, navigation, and reload. Retain text typed during delivery. - Keep acknowledged run-only Stop neutral and show workspace contention as waiting. Project exhausted native failures as Blocked. - Restore the guarded task-page retry action for failed legacy runs, including the server-supported explicit new-attempt path for stopped conversation adapters. Preserve native/process recovery holds and avoid promising Retry while a decision or execution gate hides it. - Refresh delivered artifacts and handle direct user replies that reopen completed work without a clarification loop. - Check the embedded PostgreSQL PID, data directory, and actual port before connecting or migrating. - Document accepted behavior and add focused regressions at lifecycle, route, transcript, and UI boundaries. ## Verification - Final head `fece606ac2` passes the complete GitHub CI matrix: **34 green checks, two expected Storybook skips, no failures or pending checks**, including `ci / verify`, `ci / e2e`, full runner verification, typecheck, build, every server/workspace shard, and all browser shards. [CI run](https://github.com/paperclipai/paperclip/actions/runs/34727183287). Greptile is **5/5 with no open findings**. The final two commits only refine test fixtures; both affected suites pass 24/24 locally and in CI, with server typecheck green. - Complete local Vitest coverage uses the canonical groups/shards: all 635 general server suites, all 145 serialized suites, and all workspace packages. The aggregate began on `0a8001c18` while the final queue fix arrived: 23,903 passed, five failed, 87 skipped. The five port/socket/timing failures passed unchanged in follow-ups (60 tests in the exposure/file suites and 412 tests covering the serialized failures and unrun tails). The final queue/operator-identity suites separately passed 52/52. This is aggregate coverage plus explicit reruns, not a pristine single-command final-head run. - After integration with current master, queue/operator-identity/continuation suites passed 162/162 and affected UI suites passed 140/140. ACP Stop/continuation and legacy task/Inbox/message browser suites passed 9/9, including both task recovery Retry and thread Try again, automatic saved-message delivery, exactly one new run, Done, and retained output after reload. The default process Stop/Pause/Resume browser case passed (the native-provider case is opt-in and skipped by default). The complete Board attachment/receipt browser suite passed 11/11 on a disposable instance, covering both composers, exact receipts after lost responses, no replay, bound attachments, and newer drafts after reload. - Blocking-intent regressions cover pre-existing Blocked, a mismatched run/cause, an explicit manual re-block, changed dependencies, a queued comment after failure, and a block arriving between scheduling and provider dispatch. The negative cases reproduced before the fix. All 478 affected executor/recovery/dispatch tests passed; both database suites ran separately after availability-probe skips in the first combined command. The final late-dependency check passed all 143 affected recovery/dispatch tests (zero skips) after two new negative cases reproduced the bug. - Focused runtime regressions cover awaited runner ownership publication, authenticated adoption before the first checkpoint, old-finalizer detachment, idle and busy warm-session shutdown, rejected checkpoint propagation, provider-pack verification, and managed-Codex credential preservation. Four managed credential detachment cases reproduced the bug before the fix; normal owned cleanup still succeeds exactly once. - Live local Claude: SIGKILL 2.6 seconds into startup recovered the same run automatically in 53 seconds, then a normal follow-up completed in 24 seconds. SIGTERM 2.5 seconds into startup preserved the same run (54 seconds) and its queued follow-up (21 seconds). Answers remained visible and the task reached Done. - Live Claude Daytona: a warm follow-up retained its sandbox and fell from 121 seconds to 44 seconds. A separate cold turn took 127 seconds; after controller shutdown and checkpointing, its follow-up completed in 33 seconds with the same sandbox, workspace, native session, and runner. Both answers remained visible and the task was Done. - Other live journeys covered task completion and follow-up with local and Daytona Codex, local Codex crash recovery, Stop then new direction, clarification response, live artifact refresh, and shared-workspace waiting. - Validation limits: the opt-in native composer Stop/Pause→subtree Resume fixture exposes terminal/result ordering and subtree-cancellation attribution bugs that can leave a child task blocked; that new finding is assigned to a separate follow-up and is not claimed fixed here. Default CI skips this optional native-provider fixture. Managed-Codex credential handoff and the queue-agent integration use automated regression evidence. Cold custom provider-pack uploads still add startup latency. ## Risks - Automatic replacement remains deliberately narrow: local Codex, verified stopped identities, unchanged retained state, and a complete text/completion-only turn. Unknown actions, partial history, or changed ownership remain blocked. - Claude completion permission handling changes an upstream package patch. The exact isolated task bridge must remain pinned; unrelated tools keep their existing permissions. - New task failure projection changes user-visible status. No historical status backfill or database migration is included. - This is a broad lifecycle fix across server and UI. Live proof covers graceful local Claude restart during startup and idle Claude Daytona session recovery across controller shutdown. Live abrupt SIGKILL during local Claude startup also recovered the same run. Unknown ownership or missing action evidence still blocks reuse. Cold custom provider-pack uploads still add startup latency; this change avoids unnecessary repeat uploads. ## Model Used OpenAI GPT-6 (Codex), with reasoning, code execution, browser automation, and tool use. The exact hosted model ID and context window are not exposed in this task. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-12 19:41:15 -05:00
DottaandPaperclip	47ded8bf97	feat: manage AI runtime credentials through Connections (#13247) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Agent runs need credentials for a specific provider and sign-in method. > - Connections already owns accounts, grants, and access permissions. > - AI authentication should use those same boundaries. > - This pull request adds the storage, API, adoption, and runtime foundation. > - Legacy agents keep their authentication until they explicitly adopt a managed connection. ## Linked Issues or Issue Description **Problem or motivation** AI credentials are configured separately from Connections. Agents cannot consistently reuse a responsible user's account or a permitted shared account. **Proposed solution** Manage AI accounts with the existing Connections grants and permissions. Keep model and harness selection independent from credential selection. Preserve legacy authentication until validated adoption. **Alternatives considered** A separate credential registry would duplicate ownership and access policy. Automatic fallback would risk using the wrong account. **Roadmap alignment** This extends the shipped Apps, multi-user, secrets, and agent-runtime capabilities. The maintainer requested the feature and reviewed the UI. Related groundwork: #11899 (connection permissions), #10910 (connection wizard), #11692 (Claude subscription profiles), and #11854 (Codex account rotation). ## What Changed - Add AI-purpose/runtime-auth contracts and an additive, idempotent migration. - Add Claude, OpenAI, OpenRouter, and Grok provider capabilities and catalog entries. - Store credentials on grants. Resolve responsible-user defaults or explicit permitted grants. - Isolate managed credentials and provider sessions across accounts. Block missing credentials without ambient fallback. - Keep imported legacy secrets unchanged during reconnect. Use independent local Codex/Grok sign-in attempts for rotating credentials. - Add authorization, migration, concurrent refresh, retry, cancellation, and legacy-compatibility tests. This is part 1 of a two-PR stack. The app UI follows in #13248. Merge the foundation first. ## Verification - Updated against master `04e364236`, preserving upstream provider login and connector workflows. - Full workspace typecheck, production build, Storybook build, and token gates passed on the integrated branch. Final local-login changes passed 59 focused tests; new-agent and inbox regression suites passed 63 tests. - Browser checks verified automatic local Claude account detection, resumable Codex login commands, retry, focus restoration, and desktop/phone layouts. Commands create their isolated directory before invoking the CLI. - All current-head CI checks passed on `2a996560a`, including all server/workspace tests, browser shards, runner verification, typecheck, build, and canary dry run. Greptile reviewed that commit at 5/5 with no unresolved threads. Earlier local full-suite attempts hit the Mac PostgreSQL shared-memory limit; the complete suites passed in CI. - Renumbered the additive AI migration to `0276` after upstream migrations and regenerated its snapshot. Existing legacy agents retain their configuration. - Added local login status checks, owner-scoped retry, managed OpenCode remote homes, credential-aware model discovery, and task connection-repair delivery. ## Risks - Managed credential failures intentionally block execution. They do not restore legacy fallback. - Preview-era copied Codex/Grok subscriptions require independent reconnect. - The integrated branch has live provider acceptance coverage. This update verifies local Claude detection and Codex API-key task repair; it does not add a new subscription authorization/refresh or Daytona stress pass. - Runtime-auth connections must stay excluded from tool and channel handling. ## Model Used OpenAI GPT-6 through Codex, with reasoning, repository tools, code execution, and browser testing. The exact runtime model identifier and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-12 16:30:10 -05:00
DottaandPaperclip	c9021c6721	fix: require explicit native completion reviews (#13314) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Native runs report their outcome through paperclip_finish. > - The server previously turned incomplete reports into human approval requests. > - Those requests could block a later successful run, even when no person had requested review. > - This pull request creates review cards only for explicit attention requests and withdraws proven old fallback cards. > - Agents receive useful completion feedback, while explicit approval gates and task state protections remain in force. ## Linked Issues or Issue Description Related: #13266 removed reviews caused by policy upgrades. This change removes the separate completion fallback. **What happened?** An agent reported needs_review while waiting for checks without requesting a human decision. Paperclip created a generic Native completion review. A later successful report could not complete the task because that old card remained pending. **Expected behavior** Ordinary low-risk work completes after a valid done report, a successful run, and workspace finalization. Incomplete work stays with the agent. Explicit approval requests remain visible and must be resolved. **Steps to reproduce** 1. Complete a native run with needs_review and no attention requests. 2. Continue the task and submit a successful done report. 3. Observe that the old implementation leaves the task in review behind a generic confirmation card. ## What Changed - Require explicit attention requests to create native review cards. Route each request independently and preserve pending or declined decisions. - Withdraw only pending system cards with matching old decision, assessment, effect, contract, and prompt provenance. Preserve history and explicit or answered requests. - Reassess an affected current result without overwriting later task edits, runs, contracts, or workspace failures. - Return pending approval links and required actions through the completion tool. Reject contradictory done reports and empty review requests before accepting a result. - Allow one corrective continuation for incomplete results, then expose a recovery action. - Update status fixtures, database regressions, runner tests, and the completion contract documentation. ## Verification - `pnpm -r typecheck` passed after merging current master. - `pnpm build` passed after merging current master. - The combined branch passed 89 completion and Agent Chat tests. Other targeted tests passed: 170 external-chat and reconciliation tests; 50 runner-resume and control-plane tests; 13 arbiter tests; 7 chat delivery tests; 21 runner completion and runtime-context tests. - The full local test attempt exposed old review fixtures and a missing fake-provider binary. The fixtures are fixed and the helper is built. All affected suites pass in fresh reruns. The timing-sensitive Discord test also passed on rerun. - All latest-head CI checks passed, including build, typecheck, general and serialized tests, runner verification, browser tests, and canary dry run. Greptile is 5/5 with zero unresolved comments. ## Risks - Cleanup changes existing pending cards. It requires exact system provenance and only applies to low-risk agent-claim contracts. It does not delete history or dismiss explicit requests. - Status still commits after the turn and workspace finalization. Completion feedback reports current constraints and does not claim an early status commit. - Incomplete reports now request a bounded corrective run instead of an automatic approval. Repeated failures expose recovery. ## Model Used OpenAI Codex, GPT-6, with repository inspection, code execution, and test tools. The exact deployment identifier and context window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-12 13:00:04 -05:00
DottaandPaperclip	0e14c61da7	fix: fence native startup against cancellation (#13316) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Users can pause a task while its runner prepares to start. > - Cancellation must prevent preparation from creating new execution authority. > - Native runtime selection could run after cancellation and leave an unclaimed recovery coordinator. > - Saved user messages then waited for recovery that had no eligible worker. > - This pull request fences startup and lets explicit user continuation settle verified, unclaimed startup state. > - Tasks can continue after cleanup while keeping provider ownership and execution safeguards. ## Linked Issues or Issue Description Refs #13285 for startup controller leases and #13270 for explicit continuation and saved-message recovery. Related #13293 covers retained processes that actually started; this change covers cancellation before the native provider claim. Related #13315 covers legacy queued-message delivery. **What happened?** Pausing a task during startup could cancel its heartbeat before native runtime selection. Stale preparation then created an observed native coordinator on the cancelled run. The coordinator had no provider result or eligible recovery worker. A later Continue message stayed queued indefinitely. **Expected behavior** Cancellation fences native startup. After verified cleanup, a newer user message starts one fresh conversation turn. An unverified execution keeps its hold and a clear explanation. **Steps to reproduce** 1. Start a task with the native runner and delay startup preparation before runtime selection. 2. Pause the task, then release preparation. 3. Resume the task and send Continue. 4. Before this fix, native selection can persist after cancellation and block the saved message. 5. Repeat from persisted cancelled startup state after a server restart. **Paperclip version or commit** Reproduced against master at `586b5ec82` with isolated PostgreSQL regression fixtures. **Deployment mode** Self-hosted server built from source, with Paperclip Runner. ## What Changed - Serialize the cancellation fence and native runtime selection on the run row. Revalidate the startup controller lease. - Refresh the runtime before dispatching cancellation, and reject terminal or cancelled runs at the native provider claim. - Recognize never-claimed coordinators only after startup and environment cleanup are verified. Reject process, provider, owner, and conflicting launch evidence. - Settle that coordinator atomically with a new authenticated user turn. Preserve history, unknown outcomes, and attempt counts. - Reuse the saved-message worker after restart and retain pause, budget, approval, and ownership gates. - Add startup, restart, duplicate-admission, and negative-proof regressions. Document the rule. ## Verification - All 687 tests pass across the complete heartbeat recovery, explicit continuation, and native session executor suites on the rebased branch. - Six focused race regressions also pass: cancellation before and after native selection, Stop racing adapter registration, process termination during a database failure, and a run finishing during cancellation. - `pnpm -r typecheck` and `pnpm build` pass after rebasing on master at `ab15aff39`. - Greptile is 5/5 on `f3dea2ab27facdf0360b56172ebd3e5219e25538`, with no open review threads. Policy and security checks pass. - All 32 CI checks pass on the final head, including the full server/workspace test matrix, all three browser shards, runner verification, typechecks, build, and canary dry run. The two optional Storybook jobs are skipped. [CI run](https://github.com/paperclipai/paperclip/actions/runs/34697945514). - Local full-suite limitation: the broad `pnpm test:run` attempt reported two failures outside the changed area after unusually long test durations (about 65 seconds for supporting skill-file saves and 933 seconds for setup-token login). Both cases passed isolated reruns, with no code changes. The broad local run was stopped after CI completed successfully; no clean full local-suite pass is claimed. ## Risks Cancellation and startup overlap. The run and coordinator locks provide the authority fence; cleanup and process evidence provide the containment proof. Historical runs without sufficient evidence remain blocked. A saved user message authorizes a fresh turn, not automatic replay. No schema migration or dependency change. ## Model Used OpenAI GPT-6 through Codex, using reasoning, repository inspection, code execution, and tests. This session does not expose the exact backend revision or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-12 11:39:36 -05:00
DottaandPaperclip	ab15aff390	feat: add experimental persistent agent chat (#13284) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Conversations must use the same tasks, controls, and execution history. > - Users need an ongoing chat with an agent without managing task properties. > - Agents should clarify and plan work, then hand execution to assigned project tasks. > - This pull request combines the reviewed Agent Chat stack for one squash merge. > - The benefit is persistent conversation with normal task governance and shared UI. ## Linked Issues or Issue Description **Subsystem affected** Task lifecycle, agent runtime tools, shared task UI, and browser/paid runner tests. **Problem or motivation** Users need one persistent conversation with each agent. A separate chat store or renderer would duplicate task behavior and bypass existing controls. **Proposed solution** Use a task-backed chat per company, user, and agent. Reuse the task composer and transcript. Clarify and plan in chat, then create assigned project tasks with the relevant plan. Keep Agent Chat behind its own disabled-by-default experimental setting. **Roadmap alignment** This implements the task-backed direction in [CEO Chat](https://github.com/paperclipai/paperclip/blob/master/ROADMAP.md#-ceo-chat). Related proposals: #2504 and #9693. Related request: #7981. The maintainer requested one squash merge of the complete stack. Consolidates the reviewed runtime [#13281](https://github.com/paperclipai/paperclip/pull/13281), backend [#13282](https://github.com/paperclipai/paperclip/pull/13282), and UI [#13283](https://github.com/paperclipai/paperclip/pull/13283) layers with this PR's E2E coverage. All four layers passed CI and received Greptile 5/5 before consolidation. This PR targets master and includes the complete feature. ## What Changed - Add personal canonical chat tasks with ordinary company visibility, immutable identity, idempotent first sends, and an idle waiting state. - Process `/new` in queue order. Preserve history, release a chat pause, and fence old provider context and delayed writes. - Keep chat lifecycle rules across recovery, finalization, assignment, task lists, and rollups. - Support research and plan revision in chat. Hand plans to ordinary assigned project tasks before execution starts. Reject new chat subtasks. - Add repository-aware project creation and discovery tools, including multiple repository IDs and GitHub URLs, authorization, idempotency, and durable project-created cards. - Reuse task UI components for chat, with starred/recent agent navigation and a separate `enableAgentChat` experimental flag. - Add deterministic browser tests and 24 paid chat cells across four Codex/Claude profiles, with validated reports and screenshots. - Integrate current master recovery, controller lease, queued-message, and task UI changes. Gate chat interruption and deferred promotion on ownership/feature policy. Guarantee lease renewal and active controls are stopped even if teardown fails. - Preserve master's migration 0273 and generate chat migration 0274 with idempotent replay for development databases. ## Verification - Prior exact heads of all four PRs passed Linux CI, including build, typecheck, general/serialized tests, and browser E2E. Each had Greptile 5/5 and no unresolved findings. - Integrated local verification passed: full repository typecheck and production build, Storybook build, token gates, 340 focused UI tests, all 20 deterministic chat browser tests, two migration replay tests, 88 focused chat/queue/native/controller tests, and provider/session regressions including real lease expiry. These include the three lifecycle regressions for the final admission/teardown fixes; server typecheck also passes. Current head `1268eda16cc2af892055917e7292f068820be135` has Greptile 5/5 with no unresolved findings and passing security scans. All final-head CI gates passed: build, full Runner verification, typecheck/release registry, canary, all general/serialized test shards, and all browser E2E shards ([CI run](https://github.com/paperclipai/paperclip/actions/runs/34696739927)). Local PostgreSQL startup contention required serialized retries; skipped fixtures do not count as passing coverage. - The earlier paid campaign passed all 24 chat cells and retained 32 screenshots: [report](https://d1p6rlowie26tp.cloudfront.net/runner-e2e/campaigns/gha-34648511170-1/index.html?report=agent-chat#suite-agent-chat). It tested `abacbdfd2f660709ec37312cdb758284c8399d04`; it is prior evidence, not a paid run of this integrated head. - Manual check: enable Agent Chat in Experimental settings, open an agent, clarify and revise a plan, then hand off to an assigned project task. Stop a reply, send `/new`, and verify fresh context with retained history. Disable the setting and verify agent shortcuts/new chat turns are blocked. ## Risks - Queue/session integration can affect retries and delayed writes. Tests cover ownership, cancellation, reset boundaries, idle recovery, and ordinary task behavior. - Migration 0274 adds conversation fields and constraints. Replay is idempotent and preserves existing development chat history. - This combines the previously reviewed stack at the maintainer's request. Agent Chat remains off by default and is separate from Conference Room. ## Model Used OpenAI Codex, GPT-6 Astra (`gpt-6-astra`), with reasoning, code execution, browser tools, and parallel review. The exact context-window size is not exposed in this session. Codex and Claude also ran as test subjects in the linked paid campaign. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-12 08:56:04 -05:00
DottaandPaperclip	51b0e01ead	fix: resume saved user messages after execution recovery (#13270) ... Preserve verified native process-stop evidence and retry saved user messages through normal continuation admission after recovery cleanup. Show the current wait reason and serialize delivery so a saved message starts one fresh turn. Validated with 410 focused tests, typecheck, build, token gates, all PR CI checks, and Greptile 5/5. Co-Authored-By: Paperclip <noreply@paperclip.ing>	2026-09-11 17:12:55 -05:00
DottaandPaperclip	250deab910	fix(runner): keep healthy native sessions alive (#13261) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Native sessions keep a provider process and its work alive across control-plane operations. > - A hidden 15-minute turn deadline stopped work even when the agent timeout was zero. > - A one-hour runner lifetime and fixed connection lease added two more limits. > - Recovery also rejected goal commands because it reconstructed their startup summary with the wrong protocol version. > - This pull request removes implicit duration limits and renews authenticated leases in the harness. > - Healthy sessions can continue without model action or a user interface change. ## Linked Issues or Issue Description Refs #13092 and #12845. Related: #13163 covers sandbox recovery after app restarts; this change covers session duration and lease renewal. **What happened?** A native Codex session stopped after 15 minutes while a tool was still running. The agent had `timeoutSec: 0`. Recovery then rejected a `session.goal.get` startup command with `invalid provider startup ownership fence`. **Expected behavior** An unlimited session keeps working while its provider and authenticated controller remain healthy. Lease maintenance is transparent. Explicit timeouts, cancellation and revoked authority still take effect. **Steps to reproduce** Start a native session with `timeoutSec: 0` and run a tool beyond 15 minutes. Before this fix, the runtime cancels the turn. A recovery startup that uses a goal command also exposes the protocol-version mismatch. ## What Changed - Honor the agent turn timeout. Zero disables the timer. Long explicit durations use timer chunks to avoid Node timer overflow. - Default native runner lifetime to unlimited. Keep bounded startup, reconnect and control-operation deadlines. - Renew leases over the authenticated connection. Persist renewal before the reply. Validate identity, epoch and expiry. Handle duplicate requests and a lost reply on reconnect. - Freeze renewal during warm ownership transitions and terminal handling. - Validate persisted goal startup commands with protocol v2. - Add duration, renewal, ownership, recovery and real-process regression tests. Update runner protocol and recovery docs. - Add no UI components or controls. Renewal requires no model output or user action. ## Verification Current head: `348e369c35c5da8bb8be378f4b35dcf6f40882e7`. [CI run](https://github.com/paperclipai/paperclip/actions/runs/34649767113). - All 32 checks pass on this head. The two Storybook checks are skipped as expected. CI includes full build, typecheck, runner verification, browser suites, server tests and the canary package dry run. - Greptile reports 5/5 on this head. All review threads are resolved, and the security scan passes. - Passed `pnpm -r typecheck` and `pnpm build` locally. - Passed 219 native-runtime and controller tests, including fake-clock tests for three weeks of renewal and 30-day explicit timeouts. Six denial tests confirm that renewal cannot extend expired, revoked or mismatched authority. - Passed 337 executor, cancellation and restart-recovery tests, plus 278 Rust runner-core library tests. - Passed a real runner with a silent fake Codex provider across its original lease expiry. Runner PID, provider PID, thread and active turn stayed unchanged. Warm-attach recovery tests also pass. - Passed all 83 plugin-worker tests and 159 of 161 workspace-runtime tests locally. The two remaining assertions passed with a canonical macOS temporary directory, as did the changed runtime fixture. The full affected server shard passes in CI. - An unchanged GitHub callback-ordering test failed once in CI, passed locally in isolation, and passed its one test-shard retry. The final CI summary is successful. - The full local `pnpm test:run` sweep was interrupted after dependency setup failures and load-related timeouts. Identified failing suites passed in isolated reruns after the dependency repair. The complete test matrix passed remotely in CI. ## Risks - Deploy the controller and runner together to enable renewal. Older peers keep their existing bounded lease behavior. - Unlimited runtime permits long resource use until completion, explicit cancellation, configured timeout or loss of valid authority. - Lease renewal changes authenticated protocol handling. Regression tests cover stale, revoked and mismatched authority, lost replies and warm handoff behavior. - Simulated multi-week tests and a real lease-boundary test do not constitute a weeks-long production soak. ## Model Used OpenAI GPT-6 through Codex, with repository inspection, code execution and TypeScript/Rust test tools. The exact backend revision and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-11 17:09:43 -05:00