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Author	SHA1	Message	Date
DottaandPaperclip	042051904d	fix(codex): deliver configured service secrets to shell tools (#17216) ... ## Thinking Path > - Paperclip lets operators assign tools and credentials to agents. > - Legacy Codex starts provider processes and builds a separate shell environment policy. > - Both ACP and CLI removed every variable whose name contained KEY, SECRET, or TOKEN. > - This also removed service credentials that the operator explicitly assigned, such as SLACK_BOT_TOKEN. > - This pull request uses the resolved configuration to admit assigned service secrets by name. > - Every Codex launch keeps a bounded shell allowlist, including launches without an agent identity. > - Assigned scripts can use their credentials without adding unassigned host secrets to shell tools. ## Linked Issues or Issue Description Related: #16255. That PR fixes project-level exclude patterns. This PR fixes the removal of explicitly assigned service secrets and the fallback to an inherited policy when no agent identity is present. **What happened?** A Codex task could not run a Slack posting script. SLACK_BOT_TOKEN was present in its resolved launch environment, but Paperclip removed its name from shell_environment_policy.include_only. A live removal check also showed that an identity-free launch without an explicit policy could inherit an unassigned host token. **Expected behavior** An explicitly assigned service credential reaches shell commands. Removing that binding removes its shell access on the next launch. Unassigned host credentials stay outside the allowlist. Codex login credentials and observability headers keep their separate provider paths. **Steps to reproduce** 1. Configure a Legacy Codex agent with a synthetic SLACK_BOT_TOKEN value. 2. Run a shell command that checks whether the variable exists without printing its value. 3. Before this fix, the variable is absent. Repeat through ACP and CLI. 4. Remove the binding and run a second turn. Check that neither the removed token nor an unassigned host token reaches the command. **Paperclip version or commit** Reproduced in the executor regressions before the fix on master at 4dfcb4c9b8. The final change is rebased on 25f2d05282. **Deployment mode** Source checkout. Local macOS arm64 provider acceptance with Codex CLI 0.160.0 and Codex ACP 1.6.2, gpt-5.6-sol, and an existing ChatGPT login. ## What Changed - Added one shared Codex shell-name policy for Legacy ACP and CLI execution. - Admit explicitly resolved service-secret bindings. Keep Codex login keys, observability credentials, and private runtime transport tokens outside that opt-in. - Reject glob-shaped environment names so one configured name cannot match other credentials. - Always emit the bounded policy. Do not fall back to host inheritance after a binding is removed. - Updated executor regressions, the identity contract, and the paired verification maps. ## Verification - Red before the fix: executor regressions failed because SLACK_BOT_TOKEN was absent in ACP and CLI, with and without agent identities. - Green: 267 tests passed across the two executor suites and the shared shell-policy suite. Coverage includes host/provider isolation, unresolved and removed bindings, glob names, identity delivery, and names-only metadata. - The complete Codex adapter source suite passed after the CI follow-up: 571 tests passed, 1 skipped across 31 files. Its typecheck also passed. - The first CI run caught four stale expectations in ACP config and SSH launch tests. Those now assert the bounded policy and the existing command/resume behavior. No production code changed in that follow-up. - Live CLI and ACP acceptance: run a Python presence check through each real adapter, remove the synthetic Slack binding, and run again. The assigned token was present only on the first turn. The unassigned host token and OpenAI API key were absent on both turns. CLI retained its session; ACP correctly invalidated its session after the configuration changed. Workspace proof files persisted. - An earlier live CLI check failed after binding removal because the no-policy fallback exposed the synthetic host token. The final change removes that fallback. Both live checks then passed. - Full pnpm -r typecheck and pnpm build passed. The changed packages were compiled again after the safety correction. - node scripts/check-maps.mjs and git diff --check passed. - The local pnpm test:run attempt reported failures in native warm-session tests and was interrupted. That full-suite result is not a pass; PR CI must establish the final repository-wide gate. One named native failure passed alone, and the complete native executor file then passed separately (774 tests). The original broad-run failure cause remains unconfirmed. - After rebase, one Gemini skill-root case timed out at five seconds while the broad run was active. The case passed alone, and the full focused set then passed again at the PR head (267 tests). The earlier timeout remains part of the verification record. - An initial broad adapter run failed because sandbox restrictions denied loopback listeners. Running the same suites with loopback access passed. ## Risks - Explicitly assigned service secrets now reach shell commands. This is the intended behavior change: assigning a credential authorizes the run to use it, and a model-directed command can read it. This is not a broker that hides assigned credentials from the model. Operators must assign only credentials and service permissions authorized for the run. Configuration and secret-access authorization remain with their existing owners. - Superagent initially flagged this intended assigned-credential exposure as a P2. The inline reply records the trust-model rationale and the documentation states it explicitly. The security scan on the final documented revision passed without any check override. - The launch policy contains names, not values. Log redaction remains in place. Provider login credentials and observability headers remain excluded from the service-secret opt-in. - Identity-free Codex runs now also receive a bounded policy. This removes reliance on the operator's inherited shell policy. - Existing explicit project exclude patterns retain their behavior; #16255 addresses that separate case. - The change has not been deployed to a shared instance. ## Model Used OpenAI GPT-6 through Codex, with reasoning, repository tools, and code execution. The exact served model ID and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with Fixes / Closes / Refs OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run the focused tests locally and they pass; the full-suite limitation is recorded above - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-22 18:17:34 -05:00
3 people	b448710986	fix: derive startup warmth from per-layer reuse evidence (#16908) ... ## Thinking Path > - Paperclip helps people manage AI agents and inspect their work. > - Agent startup can reuse a lease, workspace, Runner, process, or session. > - A session ID can remain the same when other resources are new. > - The old cold/warm label did not show these separate decisions. > - This pull request records closed reuse receipts and derives labels from them. > - Reports now show partial reuse and missing evidence. ## Linked Issues or Issue Description Refs #11685. That issue tracks a specific ACPX fingerprint repair. This change records reuse evidence across startup resources. It does not repeat that repair. **What existing behavior does this improve?** Startup labels in the operator trace and Product E2E reports. **Current behavior** A cached runtime or a continuous session can suggest a warm startup even when workspace staging or provider launch work occurs. **Proposed behavior** Record each layer's reuse decision and a closed reason. Record observed provider launch counts. Use `warm`, `cold`, `partial_reuse`, or `unknown` from those receipts. Keep old runs unknown when they have no receipts. ## What Changed - Add local run-log receipts for the lease, workspace, Runner, provider process, and provider session. - Count physical ACPX launches, including respawns. Preserve the reason for a new process. - Reuse native workspace adoption and session lifecycle evidence. Keep native and bridged remote provider-process reuse and launch counts unknown where physical evidence is absent. - Show the per-run summary in retained results and the dashboard. Keep missing legacy values explicit. - Set the legacy trace boolean only for fully evidenced cold or warm startup. Keep the operator OTLP gate. Add no first-party Telemetry. - Test full reuse, workspace invalidation, two direct provider launches with session continuity, and report generation. - Start the final diagnostic write without waiting for persistence. Keep lease cleanup independent of a stalled event sink. - Keep remote provider evidence unknown after runtime setup fails or the host relay starts twice. - Align a stale Pi support-test expectation with current master profile 28 and its suite fingerprint. Keep the qualification rules unchanged. ## Verification - Passed: all 319 runtime, startup-timing, reuse-summary, and native workspace-history tests. Disposable local Git tests used the native Git binary. - Passed on the current commit: all 2,768 Runner E2E support tests across 128 files. This includes report and history tests for generated HTML and normalized JSON. - Passed: `pnpm --filter @paperclipai/adapter-utils typecheck`. - Passed on `df60f8dbdbfcb6d80c84cd3bf563f8d58b2f9f03`: all PR CI gates, including repository typecheck and build, all test shards, and browser tests. Both automated reviews are 5/5. GitHub reports 55 successful checks, one neutral review, and two skipped Storybook checks. - The first server shard run failed because an unchanged workspace-runtime fixture did not accept health connections within 10 seconds. Its isolated local test and the single failed-jobs rerun both pass. This establishes recovery; the cause of the first timeout remains unknown. - Passed in the hosted source run on this exact commit: recursive typecheck, token gates, the large Runner E2E typecheck, Runner E2E unit tests, and build. The retained `source.txt` matches this PR head. - The extra unsharded `pnpm test:run` reached its 60-minute limit (exit 124). It has no complete verdict. The broad workflow therefore reports failure. No assertion-failure marker appears in the retained partial log. Full-suite acceptance uses the passing canonical PR CI partitions. A read-only inventory check found no gaps across 1,023 general server files, 161 serialized suites, and 20 workspace projects. The separate chat/native Runner lanes cover the excluded server files. No tests or timeouts were weakened. The local environment has 4 GiB of memory. Use CI for the large Runner E2E typecheck. - The initial report tests failed because the harness could not resolve package imports from the repository root. Relative source imports fixed that failure. - The first broad local run had timeouts from the environment Git bridge. Native Git resolves the ancestry timeout and all runtime tests pass. The added report fixture lacked its required screenshot; the corrected report tests pass. A stale master assertion expected Pi profile 27, while the generated profile is 28. Updated its expectation and exact suite fingerprint; all 78 targeted support tests pass. The clean full support run passes all 2,768 tests. - The three review regression cases failed before repair. They showed remote counts of zero and two, and a completed run that waited for the final diagnostic sink. They now pass. The stalled-sink case keeps persistence pending while the run returns, both bridge stops run once, and the staging lock map becomes empty. - Hosted evidence for this commit: [source verification](https://github.com/paperclipai/paperclip/actions/runs/39335475416), [retained command logs and status table](https://github.com/paperclipai/paperclip/actions/runs/39335475416/artifacts/12228829282). All listed commands exited zero except the incomplete unsharded test command described above. - The physical-launch test drives the executor's spawn callback twice. The native workspace test uses real Git repositories and verifies reuse and invalidation. These are deterministic tests, not a paid provider qualification campaign. ## Risks - Consumers must handle `partial_reuse` and `unknown`. Partial evidence no longer produces a legacy cold/warm boolean. - Native and remote bridged provider process evidence is still unavailable on some paths. The report shows unknown values for those paths. - Receipt emission is best effort. Missing receipts reduce confidence in a label and must not change execution or settlement. - No schema migration, first-party Telemetry event, or endpoint default changes are included. ## Model Used OpenAI Codex, based on GPT-6, used reasoning, repository tools, and code execution. The exact provider model ID and context window are not exposed to this session. The existing implementation checkpoint was preserved from the earlier agent run. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> Co-authored-by: devinfoley <139239+devinfoley@users.noreply.github.com>	2026-10-19 21:52:57 -05:00
DottaandPaperclip	ac9459bae3	feat: configure company agent observability (#16874) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Companies use several agent harnesses and execution environments. > - Operators need one place to select where native agent logs and traces go. > - An inference proxy would add a dependency to the agent request path. > - This pull request supplies native OpenTelemetry settings to managed Codex and Claude Code processes. > - Company secrets protect destination credentials. Export failure does not change the task result. ## Linked Issues or Issue Description **Subsystem affected** Company settings, shared contracts, database, server, adapters, and runner. **Problem or motivation** An operator cannot configure a company destination for native agent logs and traces. Manual harness configuration is hard to apply across local and remote execution. **Proposed solution** Add one company destination: Braintrust or a custom OTLP HTTP/protobuf endpoint. Apply a transient snapshot when execution preparation starts. Keep credentials out of API reads, task environment manifests, recovery files, and command arguments. Replace a warm process when its export settings change and preserve its conversation. **Alternatives considered** Multiple destinations can use a user-operated collector for fan-out. This change does not add a collector, an inference proxy, or transcript scraping. **Roadmap alignment** This extends company settings, secret management, and support for multiple harnesses. The maintainer requested this implementation. Searches for observability and Braintrust found no duplicate company destination feature. Related infrastructure tracing work in #16236 has a separate content-free contract. ## What Changed - Add strict schemas, revision checks, encrypted secret storage, activity records, and board-only settings routes. - Add explicit synthetic logs and traces tests with a bounded HTTP request and sanitized results. - Supply native Codex configuration and Claude Code environment values through local and remote launch paths. - Preserve Codex login refresh through the existing managed credential link. Retain unsaved drafts across background reads. Require complete custom header re-entry when the endpoint origin changes. - Separate process export compatibility from conversation identity. Isolate generated Codex configuration and preserve resumable sessions, including remote home refresh after export changes. - Advance the immutable Pi/Copilot source attestations for shared environment and sidecar code changes. Keep their provider payloads unchanged and retain prior identities for decoding. - Redact destination credentials throughout launch diagnostics and HTTP logs. - Add the production settings form, Storybook states and journey, documentation, and feature/access map entries. ## Verification - Real managed local Codex 0.160.0 and Claude Code 2.1.286 tasks exported to Braintrust. API readback and the Braintrust UI showed the test records. A real remote Daytona Codex task exported through the legacy `exec` path. - Live tests exercised content capture off, export disabled, warm conversation reuse, and a destination that accepted connections but never replied. Agent work succeeded and export requests stopped at the configured three-second timeout. The UI connection test returned “Test payload accepted”; the saved API key stayed masked after reload. - All current-head CI test lanes, typechecks, packaging/build checks, and required aggregates passed on `71e994b2be9c8fb6d6e938a4ad7cf4c95fdafe31` ([CI run](https://github.com/paperclipai/paperclip/actions/runs/39319194318)). Greptile completed on that exact commit at 5/5, with zero unresolved review threads. The additional optional Paperclip Review check remains queued waiting for its assigned agent. - Local workspace typecheck and build passed. Focused verification included 239 combined runner tests, 789 API/native-session tests, 107 Codex home/ACP/sandbox-site tests, 204 feature/privacy tests, and the affected Rust suites. Migration, token, map, Storybook catalog, and Storybook build checks passed during acceptance. These checks ran at the relevant implementation or merge boundary; the current-head CI is the complete final gate. - Managed AI credential projections now receive enabled and disabled company export settings; genuine caller-owned Codex homes remain untouched. Two regressions reproduced the skip before the repair. All 276 engine/lifecycle tests and adapter-utils typecheck pass afterward. The launched TOML retains provider/MCP settings, credential continuity, and redaction. - Settings saves, removal, and the real company-deletion owner acquire secret mutation ownership before database locks. PostgreSQL NOWAIT probes cover all three paths; concurrent save/rotation/removal/deletion requests settle correctly. The affected suites passed 137 tests, followed by all 32 service/connection cases after expanded deletion coverage. Server and Codex adapter typechecks pass. - Codex source profiles use the effective CLI argument list. A spawned fixture CLI reproduced both ignored-argument failures; all three precedence/fallback cases now pass. - Real tar staging reproduced remote conversation loss in both API-key and subscription modes before the repair. Both now pass: changing managed settings preserves sessions, archives, native indexes, and refreshed subscription credentials. A corrupt upload preserves the prior config and conversation. - Preserved failure evidence: initial CI caught stale Pi/Copilot source attestations, a missing test-harness helper, and packaging fixture/probe mismatches; those were corrected and covered by focused checks. Superseded heads had intermittent attachment-composer timeouts despite successful uploads; [the original trace and screenshot remain available](https://github.com/paperclipai/paperclip/actions/runs/39309701089/artifacts/12215109203). The same attachment case passed on the final head: [25/25 tests in shard 3](https://github.com/paperclipai/paperclip/actions/runs/39319194318/job/118288637051). - A connection-fault fixture also exposed a stale pooled socket after its hang case; closing fixture responses isolated scenarios and the full affected suite passed. - The broad local test run was not clean: database resource failures, timeouts, an older cached module graph, and a stale optional-resource manifest assumption were recorded. Focused checks passed after the documented fixes. This does not establish a clean full local pass. - Native remote Codex, remote Claude, and the full ACPX Codex bridge remain unqualified. The direct Codex resume test does not establish full bridge acceptance. ## Risks - Native exporters perform network requests from each execution environment. A server connection test does not prove remote reachability. - Prompts, assistant responses, and tool content are enabled by default when supported. Native caps and harness-specific controls still apply. - Caller-owned Codex homes are unsupported for automatic configuration and remain untouched. - Native harnesses and their tool processes can inspect export credentials. The settings form and documentation advise using ingestion-scoped credentials. Retained headers remain bound to their saved scheme, host, and port; changing origin requires fresh values or removal. - Migration 0357 adds a company-scoped row and secret reference. It is safe to reapply. Secret removal and company deletion use the existing secret lifecycle. - Slow or unavailable destinations must not block task settlement. Export settings take effect at the next execution preparation boundary. ## Model Used OpenAI Codex, GPT-6, with reasoning, tool use, code execution, and browser verification. The exact serving model ID and context window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-19 15:36:04 -05:00
3 people	aaeff418cf	fix(acpx): add a positive control to stalled-tool permission evidence (#16769) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The ACPX engine runs Claude agents. A watchdog ends a turn when a pending tool call gets no update for 30 minutes. > - #16688 added a field to stalled runs. The field records if the stalled call's permission request reached Paperclip. > - Recent stalled runs show `acpStalledToolPermissionRequested: false`. We can read this as "the call stopped before its permission request". That reading is correct only if calls of the same kind usually send a request. > - We have no data that shows if finished calls of that kind sent requests. Thus we cannot tell if the missing request is a real signal. > - This pull request records a positive control: the number of finished calls of the stalled call's kind, and how many of them sent a permission request. > - The benefit: the next stall event tells us if the missing request locates the stall, or if it gives no information. ## Linked Issues or Issue Description Refs #16688 **What happened?** Runs stop with the stalled-tool watchdog error. The diagnostics show that the stalled call sent no permission request. The diagnostics do not show if finished calls of the same kind sent requests. **Expected behavior** The stalled-run diagnostics contain enough data to show if a missing permission request is a real signal. **Steps to reproduce** A pending tool call gets no ACP update for 30 minutes. The watchdog ends the turn. The run result contains the stalled-tool fields. ## What Changed - `packages/adapter-utils/src/acpx-engine/execute.ts`: when the watchdog fires, count the finished calls of the stalled call's kind, and count how many of them sent a permission request. Write the counts to the run result as `acpSettledSameKindToolCount` and `acpSettledSameKindToolPermissionRequestedCount`. - `server/src/services/run-failure-diagnostics.ts`: allow the two new fields as non-negative safe integers. Other values are dropped. - `doc/observability.md`: explain how to read the two fields with the existing permission-request field. - Tests: extend the existing stalled-tool tests in `execute.test.ts` and `run-failure-diagnostics.test.ts`. ## Verification - `pnpm exec vitest run src/acpx-engine/execute.test.ts` in `packages/adapter-utils`: 244/244 pass. - `pnpm exec vitest run src/services/__tests__/run-failure-diagnostics.test.ts` in `server`: 115/115 pass. - Mutation check: remove the kind filter, or count every finished call as "requested". Each mutation makes the stalled-tool test fail. - `tsc --noEmit` passes in `packages/adapter-utils` and in `server`. Note: the full `server` `typecheck` script did not run locally, because the runner vendor build step failed in this sandbox. I ran `tsc --noEmit` directly. ## Risks - Low risk. The change only adds two counts to the run result after the watchdog fires. It does not change the decision to stop the turn, or any permission decision. - The fields hold only counts. They contain no tool titles, inputs, or identifiers. This is the run-log and run-result path. It is not Telemetry. The fields reach Sentry through the existing allowlist in `run-failure-diagnostics.ts`. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, used through Claude Code with tool use (shell, file edits, test runs). ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: devinfoley <139239+devinfoley@users.noreply.github.com> Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>	2026-10-18 13:59:16 -07:00
3 people	63306f6660	fix(acpx): record whether a stalled tool call's permission request arrived (#16688) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Hosted `claude_local` runs use the ACPX engine. Claude can start background subagents, and those subagents call the runtime MCP tools that Paperclip attaches. > - #16671 added a stalled-tool watchdog. It ends a Claude turn when a pending tool call gets no ACP update for 30 minutes. That PR said the most likely cause of the stall is a lost ACP permission round trip, but it could not prove it. > - A staging run tripped the watchdog. Two background subagents started 12 MCP calls. ACP reported each call as `pending`, and no call got another update. The MCP gateway logs show the 9 earlier calls from the parent agent, but no request from the 12 subagent calls. `MCP_TOOL_TIMEOUT` (15 minutes) did not end them. So the calls stalled before Claude sent them to the MCP server. > - The run record cannot say if the permission request for a stalled call reached Paperclip. Without that fact, the next stall gives no new evidence about the cause. > - This pull request records, for a stalled run, whether the stalled call's permission request reached Paperclip, and how many pending calls had a permission request. > - The benefit is that the next stall tells us which side of the permission round trip stopped, so the real fix can go to the correct layer. ## Linked Issues or Issue Description - Refs #16671 (the stalled-tool watchdog; this PR tests the cause that PR suspected) - Refs #16360 (the MCP client deadline that cannot reach a call that was never sent) **What happened?** A hosted staging `claude_local` run started two background subagents. Each subagent started six `execute-sentry-tool` MCP calls. ACP reported all 12 calls as `pending`. None got a result, an update, or an error. The MCP gateway received no request for them. The parent turn finished its answer but stayed open for the subagents. After 31 minutes the watchdog ended the turn with `acpx_tool_stalled`. A single background subagent with six parallel calls to the same tool did not stall in a later test. **Expected behavior** When a tool call stalls, the run record shows if the call's permission request reached Paperclip. Then the stall can be put on the agent side or on the relay side of the round trip. **Steps to reproduce** 1. Start an ACP `claude_local` run in a sandbox that uses two background subagents to call runtime MCP tools. 2. Wait until a subagent's tool calls stay `pending` with no further ACP update (in staging this happened without a known trigger). 3. See that the watchdog fails the run with `acpx_tool_stalled`, but the record has no evidence about the permission round trip. **Paperclip version or commit** `master` at 1f27427. ## What Changed - The ACPX engine passes an `onPermissionRequest` hook to the ACPX runtime. The hook records the tool call ID of each permission request and returns `undefined`. ACPX then uses its permission mode to decide the request, the same as before. - When the watchdog fires, it records `permissionRequested` for the stalled call and counts the pending calls that had a permission request. - A stalled run's result has two new fields: `acpStalledToolPermissionRequested` (boolean) and `acpPendingToolPermissionRequestedCount` (non-negative integer). The `[paperclip]` stderr line also says if the request reached Paperclip. - The server run-failure diagnostics allowlist the two fields. They accept only a boolean and a safe non-negative integer. - `doc/observability.md` describes the fields. It also says that a background subagent's Task call completes when the subagent starts, so the watchdog watches the subagent's own calls. ## Verification - `npx vitest run src/acpx-engine` in `packages/adapter-utils`: 21 files, 423 tests pass. - Engine tests: - The existing stall test now sends a permission request for the Task call only. The run records `acpStalledToolPermissionRequested: false` and a count of 1. The hook returns `undefined`. The log line says the request did not reach Paperclip. No tool title or ID appears in the diagnostics. - A new test sends the permission request after the relay saw the stalled call. The run records `acpStalledToolPermissionRequested: true`. - Mutation check: when the hook does not record the ID, both tests fail. - `npx vitest run src/services/__tests__/run-failure-diagnostics.test.ts` in `server`: 115 tests pass. Invalid values for the new fields are dropped. - `npx tsc --noEmit` passes in `packages/adapter-utils` and in `server`. - Runtime dependency assumption: the hook must not change permission decisions. I called the real patched `acpx@0.12.0` `AcpClient.handlePermissionRequest` with and without the hook in `approve-all`, `approve-reads` and `deny-all`. The responses and the permission stats were the same in each mode, and the hook saw each request. The hook only adds an ID to an in-memory set for the run, so it adds no remote call and no blocking work. - Limits: the tests mock the runtime, so they do not prove the hook runs in a real sandbox relay. The acpx source passes the hook to the client on every runtime path (`runtime.js`), and the real-client check above covers the decision path. ## Risks - Low risk. The hook only observes. If ACPX ever treats a host hook as the decision owner, the check above would show a different decision. That is not the case in the pinned `acpx@0.12.0`. - The set holds one string per permission request for the length of one run. That is bounded by the number of tool calls in the run. - This PR does not fix the stall. It gives the evidence for the next occurrence. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`) through Claude Code, with tool use and code execution. It read the run log, the gateway logs, and the ACP agent and client code, ran reproduction probes, edited the code, and ran the tests. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: devinfoley <139239+devinfoley@users.noreply.github.com> Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>	2026-10-17 21:05:43 -07:00
3 people	938a441944	fix(acpx): end Claude turns whose pending tool call stops receiving updates (#16671) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Hosted `claude_local` runs use the ACPX engine. Paperclip sends runtime MCP servers to Claude, and Claude can start subagents (the Task tool) that call those MCP tools. > - #16360 set `MCP_TOOL_TIMEOUT` for Claude. That bound works: in a local test with the same Claude binary, a direct MCP call and a subagent MCP call to a server that never answers both ended at the bound. > - A hosted run still hit the 4h sandbox timeout on a release that has #16360. Its run log shows a subagent that started four MCP calls. ACP reported the four calls as `pending`, and they never got another update. About 40 other MCP calls in the same minutes finished in 3–25 seconds. So the four calls most likely never reached the MCP server, and `MCP_TOOL_TIMEOUT` did not apply to them. > - The subagent's Task call got an `in_progress` heartbeat every 30 seconds for the full 4 hours. The turn looked active, so no existing bound stopped it. > - This pull request adds a stalled-tool watchdog to the ACPX engine. It ends the turn when a pending tool call gets no update for 30 minutes and no other tool call finishes in that time. > - The benefit is that a stalled run fails in about 30 minutes with a clear error code, not after 4 hours with a general timeout. ## Linked Issues or Issue Description - Refs #16360 (MCP client deadline; this PR covers the stall that the deadline cannot reach) - Refs #15962 (stop-time diagnostics that showed the pending tools and their age) **What happened?** A hosted `claude_local` run gave lookups to two subagents. One subagent started four MCP tool calls. ACP reported each call as `pending`. No call got a result, an update, or an error. The other subagent finished in 3 minutes. The stalled subagent's Task call got a heartbeat every 30 seconds, so the last-event age at stop was only 28 seconds. The oldest pending tool was 3h58m old. The sandbox execution timeout ended the run after 4 hours. **Expected behavior** A tool call that never gets a result ends the turn after a bounded time. The run fails with an error that names the stall. **Steps to reproduce** 1. Start an ACP `claude_local` run that uses a subagent to call runtime MCP tools. 2. Make one of the subagent's tool calls stay `pending` with no further ACP update (in production this happened without a known trigger). 3. See that the run continues until the adapter execution timeout, because the Task heartbeats keep the turn active. **Paperclip version or commit** `master` at 4415665. ## What Changed - Add `ACPX_STALLED_TOOL_TIMEOUT_MS` (30 minutes), `ACPX_STALLED_TOOL_MARGIN_MS` (15 minutes), the check interval, and the `acpx_tool_stalled` error code in `acpx-engine/constants.ts`. - Add `resolveStalledToolTimeoutMs()`. Claude turns use 30 minutes, or `MCP_TOOL_TIMEOUT` / `BASH_MAX_TIMEOUT_MS` plus 15 minutes if that is longer. Other agents are not watched. The adapter config field `stalledToolTimeoutSec` overrides the bound for any agent, and 0 disables it. The bound is not part of the session fingerprint. - The engine records the time of the last update for each tool call, and the time a tool call last reached a final status. - During a turn, the engine checks the pending tool calls every 60 seconds. If a pending call has had no update for the bound, and no tool call reached a final status in that time, the engine: - records the stop-time activity (the same fields as a timeout or an operator stop), - writes a `[paperclip]` stderr line with the closed tool kind and the silent time, - cancels the turn, and starts the existing fail-fast cancel deadline that the duplex-loss path uses. The deadline helper is now shared by both paths. - Finalization reports the stall as a failure: `errorCode: "acpx_tool_stalled"`, `resultJson.status: "failed"`, `acpStalledToolKind` (one closed ACP `ToolKind` label or `unknown`), and `acpStalledToolSilentMs`. A timeout or a duplex loss still takes priority. A turn that completed anyway keeps its success. - The server Sentry diagnostics allowlist the two new fields. It drops the kind if it is not one closed label. - Document the watchdog in `doc/observability.md` and the `stalledToolTimeoutSec` field in the `claude_local` config notes. ## Verification - `npx vitest run src/acpx-engine` in `packages/adapter-utils`: 21 files, 422 tests pass. - New engine tests: - A silent pending call next to a Task call that keeps getting heartbeats ends the turn with `acpx_tool_stalled`, the closed kind, and the silent time. No tool title or ID appears in the diagnostics. - An agent that ignores the cancel: the fail-fast deadline closes the stream and the run fails with `acpx_tool_stalled`. - A long tool that keeps getting updates is not cancelled. - A queued call that waits behind slow calls that keep finishing is not cancelled. - `stalledToolTimeoutSec: 0` disables the watchdog, and only the wall-clock timeout ends the turn. - `resolveStalledToolTimeoutMs()` defaults, env bounds, other agents, and config override. - Mutation checks: with the watchdog disabled, the two stall tests time out (the same hang as production). Without the "no tool finished" guard, the queued-call test fails. - `npx vitest run src/services/__tests__/run-failure-diagnostics.test.ts` in `server`: 115 tests pass. - `npx tsc --noEmit -p packages/adapter-utils`: passes. ## Risks - A legitimate tool call that gets no ACP update for 30 minutes while no other tool call finishes now fails the run. Claude's own tool bounds (MCP 15 minutes, Bash 10 minutes by default) end healthy calls before that. If an operator raises `MCP_TOOL_TIMEOUT` or `BASH_MAX_TIMEOUT_MS` in the env, the bound moves up with it. Operators can also set `stalledToolTimeoutSec` or disable the watchdog with 0. - A long sync subagent stays safe while its Task call gets heartbeats. Only a call that is itself silent can trip the watchdog. - The run fails instead of continuing. The failure uses the normal failed-run recovery, and it reports to Sentry under its own error code, not under the generic timeout. - This PR does not find why the four calls never got a result. Claude runs with `--permission-mode default`, so each MCP call makes an ACP permission round trip, and the ACP stream goes through the remote process-session relay. A lost request or response on that path is the most likely cause. The new diagnostics show how often the stall happens and for which tool kind. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`) through Claude Code, with tool use and code execution. It read the run log and the ACP agent and client code, edited the code, and ran the tests. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-authored-by: devinfoley <139239+devinfoley@users.noreply.github.com> Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>	2026-10-17 14:51:49 -07:00
DottaandPaperclip	25b16e65fc	fix(observability): detail workspace and connector preparation (#16454) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The server prepares a repository, sandbox workspace, and connector access before an agent can reply. > - Existing traces measure large preparation phases but leave important work inside those phases unclear. > - Repository source materialization and Browser Use discovery can do more work than their callers suggest. > - New detail must preserve access checks, run ownership, and the existing work order. > - This pull request adds fixed OpenTelemetry spans inside those operations. > - Operators can use one deployed trace to select the next performance fix. ## Linked Issues or Issue Description Refs: #16419, #16425, #16428. **What existing behavior does this improve?** Startup traces for server workspace preparation, native sandbox synchronization, and connector assignment resolution. **Current behavior** Workspace and connector aggregate spans can take many seconds. The trace does not separate private source cloning, seed reuse, archive work, progress persistence, or each connector resolver. Browser Use resource selection builds the full authorized tool catalog. The configuration and native backend can each resolve connector assignments. **Proposed behavior** Show the awaited work as fixed child spans. Separate discovery queue wait from catalog construction. Preserve the initiating run context when another run releases a scheduler slot. Add no new lifecycle event writes for workspace detail callbacks. **Reason and benefit** Operators need evidence about the hosted critical path before another performance change. These spans distinguish filesystem work, provider transfer, authorization, transaction entry, locks, and reporting overhead. **Breaking changes** None. Authorization, query order, transaction ownership, synchronization, existing progress events, and task results retain their contracts. The change adds opt-in Observability spans under the existing OTLP endpoint gate. ## What Changed - Trace private source directory setup, Git credentials, clone, requested ref, source identity, and checkout publication. - Trace sandbox source capture, seed cache/replay, shallow clone and archive, overlay copy/archive, verification, upload, warm stamps, and descriptor persistence. - Separate existing awaited progress reporting from useful workspace work. Keep new detail callbacks trace-only. - Trace each connector resolver and Browser Use catalog/grant work. Split discovery queueing, descriptor sources, and policy evaluation. - Trace Slack authority, credential reads, catalog synchronization, transaction entry/settlement, and advisory locks. - Update the real filesystem staging trace expectations and the Honeycomb investigation guide. - Add a real scheduler regression for a queued job released by another run. Assert run ownership, parent spans, and exactly one completed queue span. ## Verification - Passed: server and adapter-utils TypeScript checks (`pnpm --filter @paperclipai/server exec tsc --noEmit` and `pnpm --filter @paperclipai/adapter-utils exec tsc --noEmit`). - Passed: 252 checks across 9 focused files. These cover real filesystem staging, native workspace synchronization, trace ownership, endpoint gating, and workspace preparation. - Passed after review: 26 trace-context, tracing-failure, and discovery-scheduler checks across 3 files (these overlap the first run). The new queued-discovery regression fails when context binding is removed and passes after restoration. An initial submillisecond timestamp assertion was replaced with explicit span-completion order to avoid SDK clock precision assumptions. - Passed on implementation commit `0e68968a4bd61001893d833f281f12bb110edbe1`: `pnpm -r typecheck` and `pnpm build`. The later commit updates only an engine test expectation. - The first CI workspace lane found an old engine trace-tree expectation. It expected the earlier span set. The updated assertion now checks the new detail spans, their parents, and single completion. Its targeted executor check passes. - The full test suite, build, release registry, and end-to-end gates pass in CI on final head `40e37d89ef679109d60a96bb5731a0616efeaa43`: 55 passing checks and 2 optional Storybook skips. The full suite was not duplicated locally after the focused run. - Greptile reviewed the final head at 5/5. No unresolved review threads remain. - After deployment, filter Honeycomb by the hashed run ID and verify `service.version`. Inspect `heartbeat.prepare.workspace`, `runtime_selection.workspace_sync`, and the connector assignment parents. The guide in `doc/observability.md` explains each new family and the nested intervals. - No hosted run has used this new instrumentation yet. Local checks cannot establish hosted latency improvement. ## Risks - Tracing adds spans when an operator configures an OTLP endpoint. Detail remains capped at 16 spans per phase per execution attempt. - Parent and child durations overlap. The documentation explains how to avoid counting them twice. - A discovery job can start in another run's scheduler continuation. The bound callback preserves the initiating async context. - New spans export fixed names and the existing hashed run ID. They add no paths, repository URLs, connector resource IDs, credentials, tool schemas, or exception text. ## Model Used OpenAI Codex, GPT-6 family, with reasoning, tool use, and code execution. The exact served model ID and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-15 12:21:32 -05:00
DottaandPaperclip	f64d05adf4	test: consolidate repeated ACPX startup metadata scenarios (#16068) ... Co-Authored-By: Paperclip <noreply@paperclip.ing>	2026-10-14 23:02:09 -05:00
DottaandPaperclip	422728fc36	test: retire seven repeated ACPX trace executions (#16061) ... Co-Authored-By: Paperclip <noreply@paperclip.ing>	2026-10-14 22:50:25 -05:00
3 people	3935e300dd	fix(acpx): bound Claude MCP tool calls when runtime MCP servers attach (#16360) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Hosted `claude_local` runs use the ACPX engine. Paperclip gives each run its runtime MCP servers (for example the `paperclip-assigned` tool gateway) as ACP `mcpServers` entries. > - Claude's default MCP tool timeout is far longer than a run. ACP `mcpServers` entries have no per-server timeout field. So the agent waits on an MCP call until the call answers. > - Hosted error reports show runs that end with "Run exceeded the adapter execution timeout (sandbox)". The stop-time diagnostics from #15962 show the problem: the agent went silent about 50 seconds into the run, three tool calls of ACP kind `other` stayed pending, and nothing ended them until the 4h sandbox backstop. > - The gateway bounds the remote provider call (10s default, 60s max). But other steps on the gateway `tools/call` path have no deadline: DB queries, row locks and pool acquisition, the credential steps before the provider timer starts, and the stdio child exit wait. One stuck step holds the agent turn for hours. > - This pull request gives the agent's MCP client a deadline: `MCP_TOOL_TIMEOUT` for ACP Claude runs that receive runtime MCP servers. > - The benefit is that a stalled gateway call becomes an MCP error that the model can see. The turn continues and does not spend the full 4h execution budget. ## Linked Issues or Issue Description - Refs #15962 (diagnostics that identified the silent turn with pending tools) - Refs #15448, #15456, #15850 (related gateway timeout and connection-health work; this PR does not overlap with them) **What happened?** A hosted `claude_local` run sent parallel MCP tool calls. No call answered. The run stayed silent for about 4 hours. Then the sandbox execution timeout ended it with "Run exceeded the adapter execution timeout (sandbox)". **Expected behavior** A stalled MCP call ends with an error after a bounded time. The agent sees the error and continues. **Steps to reproduce** 1. Start an ACP `claude_local` run that has runtime MCP servers. 2. Make the gateway `tools/call` request stall (for example, hold a lock that the request needs). 3. See that the run stays silent until the adapter execution timeout. **Paperclip version or commit** `master` at 976cdc7. ## What Changed - Add `ACPX_CLAUDE_MCP_TOOL_TIMEOUT_MS` (15 minutes) in `acpx-engine/constants.ts`. The value has wide headroom over the gateway's longest legitimate wait (60s provider calls, 2 minutes of approval preparation, and the 10-minute connection cap proposed in #15850). - The ACPX engine sets `MCP_TOOL_TIMEOUT` in the agent env for Claude when the run has runtime MCP servers. If the adapter `env` already sets `MCP_TOOL_TIMEOUT`, the engine keeps that value. Other agents and runs without MCP servers do not change. - Add an engine test for the bound, the no-server case, the user override, and a non-Claude agent. - Document the client-side deadline in `doc/MCP-RUNTIME-OPERATIONS.md`. ## Verification - `npx vitest run src/acpx-engine/` in `packages/adapter-utils`: 21 files, 423 tests pass. - The new test fails without the env assignment (`expected undefined to be '900000'`), and passes with it. - `npx tsc --noEmit -p packages/adapter-utils`: passes. - The env reaches Claude through the same per-session env path as `ANTHROPIC_MODEL`. `claude-agent-acp` merges this env into the Claude SDK env. ## Risks - A legitimate MCP call that takes longer than 15 minutes now fails. No gateway path is designed to wait that long. Operators can set `MCP_TOOL_TIMEOUT` in the adapter `env` to change the value. - The value also applies to other MCP servers in the same Claude session, for example servers in user settings. The same override is available. - Warm sessions get the env when the agent process starts again. The env is not part of the session fingerprint, so this change does not reset resumable sessions. - This PR does not fix the server-side step that stalls. It bounds the effect on the run. Server-side deadlines on the gateway `tools/call` path (DB lock and statement timeouts, a request-level deadline, SIGKILL escalation for stdio children) are possible follow-ups. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`) through Claude Code, with tool use and code execution. It read the repository, traced the gateway path, edited the code, and ran the tests. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-authored-by: devinfoley <devinfoley@users.noreply.github.com> Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>	2026-10-14 19:01:42 -07:00
3 people	4b766b8729	fix(acpx): record turn activity at the moment a stop fires (#15962) ... Record stop-time ACP turn diagnostics (last-event age, oldest pending tool age, pending tool kinds) so wall-clock timeout events show whether the turn was stalled. Diagnostics only. Co-Authored-By: Paperclip <Paperclip-Paperclip@users.noreply.github.com> Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>	2026-10-12 12:33:59 -07:00
DottaandPaperclip	1e0cfcb4fc	test: retire redundant suites and consolidate owner coverage (#15978) ... Retire duplicate ACPX and Codex proof after migrating unique assertions to their behavioral owners. Consolidate repeated fixtures and exact case matrices while preserving lifecycle, protocol, company, credential, approval, and ordering contracts. Remove the unused runtime-controls compatibility path and document test ownership and preservation evidence. Co-Authored-By: Paperclip <noreply@paperclip.ing>	2026-10-12 10:44:02 -05:00
3 people	1b4c803816	fix(costs): preserve usage attribution and explain unavailable run costs (#15948) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The cost ledger records usage and controls agent budgets. > - Some runs lose the selected model or API billing category before their usage reaches the ledger. > - The dashboard reports missing costs but does not identify the affected runs or the available actions. > - This pull request preserves usage attribution and adds a compact view of cost gaps grouped by agent. > - Operators can inspect runs, open agent settings, and record saved costs without starting new agent work. ## Linked Issues or Issue Description Refs #15634, #11938, #15879. This follows the merged subscription reporting in #15634. The older proposal in #11938 addresses part of ACP model attribution. This change also rejects conflicting models across a turn, fixes credential-backed billing capture, and explains cost gaps in the existing dashboard. The Pi receipt recovery work in #15879 covers a separate adapter recovery path. This PR preserves unresolved receipts and does not recover provider usage or reprice past entries. **What happened?** ACP results use the requested model even when the runtime selects a model. Native and OpenCode API runs can report unknown billing despite a matching API credential. The dashboard shows notices without links to the affected runs. These gaps make API and subscription totals harder to interpret. **Expected behavior** Record the model selected by the runtime. Identify API billing only from a matching credential. Keep costs unresolved when reliable usage or pricing is absent. Show the affected agents and runs. Offer an accounting retry only when saved evidence is ready. **Steps to reproduce** 1. Run an ACP agent with its model left unset, or use a matching API credential with a native or OpenCode agent. 2. Inspect the recorded model and billing category for the run. 3. Open Costs Overview for a period with unpriced usage or terminal runs awaiting receipts. 4. Inspect the notice and try to find the affected run or the relevant agent settings. **Paperclip version or commit** Current master at `657e71584a0`. The patch is rebased on that commit. **Deployment mode** Self-hosted server and local development. The cost detail tests use a disposable PostgreSQL database. ## What Changed - Preserve the runtime-selected ACP model in checkpoints and final results. Conflicting models across one turn remain unpriced. - Share credential-backed API billing checks across native and OpenCode results. Keep unknown billing when the provider and credential do not match. - Add company-scoped cost detail and accounting retry endpoints. Board viewers can read details but cannot retry. Agents and foreign companies are denied. - Limit each detail category to 25 entries. Use one consistent database snapshot and sparse indexes matching the filters and sort order. Add the unknown-billing count to the existing summary query. - Replace the notice with an expandable count line. Group entries alphabetically by agent. Show the saved blob icon, link each name to configuration, and put run and retry links beside the date. - Preserve estimate and unavailable-price labels on Providers and Billers; keep retry confirmation after the resolved notice disappears. - Fetch details only while expanded. Retain the last loaded details after a refresh error. Retry saved accounting only; do not rerun the agent. - Add capture, database, authorization, UI, and Storybook coverage. Update the implementation contract and cost reporting guide. ## Verification - `pnpm -r typecheck` passed after rebase. - `pnpm build` and `pnpm build-storybook` passed after rebase. - `pnpm check:token-gates` and `git diff --check` passed. - 1,086 focused tests passed across 17 files. These cover ACP, native and OpenCode capture, PostgreSQL reports, route authorization, OpenAPI, Costs UI, and existing accounting regressions. - Desktop and mobile browser checks passed during UI review. They cover lazy expansion, alphabetical groups, loaded blob icons, configuration and run links, keyboard retry, and layout overflow. - `pnpm test:run` was attempted with command-scoped `init.defaultBranch=master` for Git fixtures. It was stopped after a native session recovery failure reproduced on unchanged base `657e71584a0` (`archives a damaged prior epoch before completing guarded same-task replacement with real runnerd`). An MCP upload case failed in the broad run but passed in isolation on both the base and PR branch. These local limitations do not affect the 1,086 passing focused tests. - Current-head CI is green, including all unit test lanes, serialized server suites, runner checks, typecheck, build, policy, and eight browser shards. Apex re-review is 5/5 on `56de60effdb`; all four original findings are addressed and every review thread is resolved. - PostgreSQL applies migration `0333` in the integration fixtures. EXPLAIN ANALYZE on the production detail statements uses the new sparse indexes behind 5,000 healthy records in each table. - Ten provider/biller card cases cover missing and estimated prices; the retry test covers row removal and notice unmount. A live Storybook browser check verifies the confirmation and updated count. - Run `pnpm storybook`. Open **Costs / Subscriptions / Cost Data Quality Details** to inspect the production page with representative fixtures. ## Risks - Model and billing metadata change for future runs. Estimates still require complete usage and a supported price. No past cost amount is rewritten. - A missing final receipt remains unresolved for budget checks. The display changes after fifteen minutes; that time limit never authorizes settlement. - Accounting retry is a write action. It retains the existing company checks, receipt fences, idempotency, and audit logging. - Detail reads are bounded and run only after expansion. They poll every 30 seconds while open. No provider probe or new summary query is added. - Migration `0333` adds two partial indexes; it changes no stored cost amounts or table columns. Index creation scans the existing tables and may briefly block writes during deployment. No lockfile or workflow change is included. ## Model Used OpenAI Codex, based on GPT-6, with repository inspection, code editing, browser checks, and test execution. The exact serving model ID, reasoning setting, and context window were not exposed to this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Codex <noreply@openai.com> Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-11 22:48:29 -07:00
Devin FoleyandPaperclip	eab93fd4a0	fix: checkpoint adapter usage and preserve unknown prices (#14991) ... Co-Authored-By: Paperclip <noreply@paperclip.ing>	2026-10-06 18:16:18 -07:00
DottaandPaperclip	e38d6d16b6	feat(connections): add advanced provider setup and live browser qualification (#15341) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Users connect accounts and choose an agent harness and model. > - The runtime change in #14970 supports custom providers on those connections. > - Normal setup must stay simple while advanced users can choose a compatible gateway. > - Shared connector rows and access controls keep these choices consistent. > - This pull request refines the agent setup UI and adds review stories and repeatable browser qualification. > - The qualification checks real tools and downloaded outputs, not only a successful run status. ## Linked Issues or Issue Description Refs #14970, #37, #13083, #14104, #14565, #12692. The core implementation in #14970 is merged. This branch incorporates its squash commit and targets `master`. Both PRs contain our implementation. #14016 is a reference only and is not a dependency. This PR has 96 changed files. ## What Changed - Complete model-provider connector presentation beside other connectors. Each row uses the existing Connect action and connection list. Tags are stored without category UI. The base PR includes the provider forms and routes. - Show persistent Subscription, API Key, and Advanced choices. Label Advanced as Custom Gateway. Reuse provider logos, connection lists, and permissions controls. Default access to the organization and all agents when permitted; keep narrowing controls under Advanced. - Keep Configure reachable before subscription sign-in, so users can select a supported environment when the default cannot sign in. Testing and saving still require a connection. Show the execution environment in Configure. Preserve the confirmed Connect choice. Editing a method, credential, saved account, or advanced choice requires that current choice to connect before testing or saving. Use matching model and thinking-effort dropdowns and retain connection icons in selected values. - Preserve the new harness model default when switching an existing OpenCode agent to Codex or Claude, and resolve user-selected model names with the effective harness. - Load popular OpenRouter models through the shared connection-model discovery path. Keep explicit model lists and manual model entry available. - Group onboarding, connection setup, agent runtime, management, recovery, and production-component stories under AI Connections / Provider routing. - Add an explicit-only provider-connections browser suite for managed local or existing local/staging targets. Use private browser profiles and credential handoffs. Support human-assisted subscription sign-in without sharing passwords or tokens in reports. - Verify persisted connection identity, runtime probes, tool execution, exact artifact bytes, completion, and context-dependent follow-up. Retain source/model provenance, cost bounds, closed error diagnostics, original failures, and cleanup evidence. - Add Gemini startup-model and skill-root fixes, Grok private-history detection, ACP filesystem regression fixtures, selected-workspace handling for local Hermes, and artifact-helper workspace fallback. - Keep managed Grok runtime homes disposable. Remove host-side transcript retention/restoration because private file modes do not isolate same-user agent processes. Ignore earlier development archives and use a fresh task handoff when history is unavailable. Verify the absence of restored transcripts with a separate same-user process. - Capture stopped-run diagnostics before deleting an attached-company fixture agent. Track creation and owned sign-in receipts; revoke only this attempt's accounts and never adopt a concurrent campaign's newly created account. Preserve failure signals and final status through cleanup. - Require the requested environment in the saved agent and every run, including follow-ups. Reject a forced incompatible target. Keep one cancellation state through startup, every cell, reporting, and teardown for SIGINT, SIGTERM, and SIGHUP. Stop further paid cells after interruption. Document qualification limits. ## Verification - Current head `b3bb3e94d577d43d9965a6b9daba039f599b2e49` includes master `d9f600043`. The security fix in `a758fde31` passes full workspace typecheck, production build, and 119 connection/Grok regressions. The unchanged UI passes all 126 configuration/model-discovery tests and token gates. The final published-guide correction passes Grok adapter typecheck. Earlier head `eebd8225c` passed the complete deterministic runner suite (1,404 Vitest tests and 128 Node tests) and all CI jobs. Current-head CI run `37520147514` passed all 47 jobs, including the full sharded Vitest and browser matrix, production build, and canary dry run. All 55 checks completed: 53 successes and two expected skips. The current-head security scan passed, Greptile is 5/5, and no review threads remain open. - A separate same-user process reproduced reading a restored Grok transcript before the security fix. The regression now finds no transcript. Existing fresh-session fallback and ordinary session metadata behavior pass. - The final account-choice and cleanup fixes pass 85 setup tests and 26 qualification-harness tests. Regressions verify that editing a connection invalidates confirmation, Configure remains reachable before sign-in, diagnostics are captured before fixture deletion, and concurrent campaigns cannot adopt or revoke each other's accounts. UI and E2E typechecks pass. - The Storybook build and actual Chromium production-component stories passed during this change. Review the neighboring AI Connections / Provider routing stories, regular connector rows, three connection modes, model discovery, and the single execution-environment control in Configure. - Cancellation smoke verified authenticated cleanup before browser close for SIGINT, SIGTERM, and SIGHUP. Regressions cover interruption during startup and reporting, missing-file ACP resource errors, and preserved permission denials. Both ACP runtime versions and 54 ACPX/Grok regressions passed. The deterministic connection-intent browser suite passed two tests. - Historical local qualification retained 43 passing API/gateway cells out of 46, with downloaded outputs and follow-up receipts. These attempts span earlier builds; they do not qualify this exact commit or staging. Subscription combinations, Gemini overloads, and the unresolved follow-up failure remain recorded rather than counted as passing. - Use `pnpm test:e2e:runner -- --list --suite provider-connections` to inspect the matrix. Follow `tests/runner-e2e/PROVIDER-CONNECTIONS.md` for credentials, target URL, sign-in assistance, budget, evidence, and cleanup. Paid live tests remain opt-in. ## Risks - The core implementation in #14970 is merged. This PR adds no database migration of its own. - Subscription login needs an interactive provider session. Dedicated accounts and staging qualification remain follow-up work; this PR does not certify every login combination for production. - Managed Grok transcript resume is deferred until provider history has an OS isolation or authorized broker solution. Follow-ups start fresh with Paperclip task context; earlier live Grok results do not qualify this behavior. - Gemini CLI 0.58.0 has an upstream ACP new-file error conversion defect. Live overloads and one unresolved follow-up timeout remain recorded. The stock CLI is unchanged, and those cases are not marked as passing. - Real-provider tests spend credits and use private credential/evidence directories. The launcher requires explicit selection and checks target ownership. It must not attach to a developer's database by accident. - OpenClaw Gateway, Hermes Gateway, Claude Managed, AWS AgentCore, Process, HTTP, and legacy ACPX local remain outside custom provider setup. ## Model Used OpenAI GPT-6 through Codex, with reasoning, repository tools, code execution, and browser testing. The exact deployment model ID and context window size were not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-06 15:21:22 -05:00
DottaandPaperclip	a590ab769d	Give managed agents persistent cryptographic identities (#15352) ... Give agents persistent Ed25519 identities encrypted with the existing instance master key. Create keys transactionally for new agents and lazily before supported managed runs, expose public identities in the API and agent UI, and protect private material during runtime delivery and output persistence. Preserve identities in recovery backups while giving imported and development-cloned agents fresh keys. Co-Authored-By: Paperclip <noreply@paperclip.ing>	2026-10-06 13:57:03 -05:00
Devin FoleyandPaperclip	3b47a6befd	Record bounded workspace restore failure stages (#15005) ... Capture allowlisted restore substep and failure metadata for future diagnosis while preserving workspace recovery behavior, error identity, cleanup ordering, and privacy. Validation: exact-head Greptile 5/5, passing CI, no unresolved review threads, and a clean merge. Detailed verification and limitations are recorded in the pull request. Co-Authored-By: Paperclip <noreply@paperclip.ing>	2026-10-05 10:58:32 -07:00
DottaandPaperclip	b17019e14d	fix(agents): reduce default instructions and qualify stock harnesses (#14948) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Its adapters supply task context and access to Paperclip skills and tools. > - The default hire manual and shared prompts also repeat general work procedures. > - Those procedures overlap with stock provider instructions and the Paperclip skill. > - Existing E2E fixtures supply a QA manual, so they do not qualify the production default. > - This pull request reduces the generic instructions and adds real default-hire coverage. > - The benefit is less competing guidance, with inspectable evidence for preserved skills and task context. ## Linked Issues or Issue Description Refs: #14920. That merged change preserves native Codex base instructions. This PR covers the default manual, shared legacy prompts, operational skill guidance, and the narrowly approved ACP skill-discovery/session-environment repair for measured delivery and credential-persistence failures. **What existing behavior does this improve?** New non-CEO hires without a custom bundle and legacy task/chat startup and continuation prompts. **Current behavior** The shipped default manual contains 602 words. Generic task/chat prompts and ordinary resume deltas repeat work procedures already available through the harness and Paperclip skill. **Proposed behavior** The default manual contains only the eight-word company identity. Shared startup prompts retain identity and connection guidance. Ordinary resume deltas retain current work context without the generic execution contract. **Reason and benefit** Let the stock harness guide general work. Keep Paperclip-specific capabilities and independently test default hires, skills, ordered comments, and chat restart. **Breaking changes** New default hires receive less guidance. Existing saved manuals, explicit custom bundles, CEO templates, and specialized wake contracts retain their behavior. The obsolete includeExecutionContract option remains accepted for source compatibility. ## What Changed - Reduce the default hire manual to one sentence. - Reduce shared task/chat defaults and remove the generic ordinary-resume contract. - Keep connection guidance, auth, skills, custom prompts, and specialized wake context. - Add credential-free instruction-boundary gates and 26 explicit Product E2E cells across eight legacy/native profiles, including two focused Paperclip-storage cases. - Capture public hire receipts before providers run, then grade delivered prompts and independent task/chat outcomes. - Add an early legacy skill API recipe for saving a task document, checking the saved revision receipt and linking the document. Improve stock task/heartbeat skill-selection metadata and show a clickable Markdown UI-link example. Keep native tool completion separate. - Advertise bounded routing descriptions and exact successfully staged SKILL.md paths in legacy ACP Claude; keep full bodies on demand and preserve remote path rebasing. - Remove only the provider environment from copied persisted ACP session records, while loading current run credentials and preserving all other options/conversation state. - Regenerate both capability metadata inventories and reject stale manifests/inventories before provider admission. - Publish the original reduction and focused skill-repair comparisons, preserving all failures, automatic recovery, cost coverage and limitations. ## Verification **Behavioral qualification remains pending.** Original legacy ACP Claude loses the issue document only in the reduced cohort beneath an unchanged credential failure. A source-backed diagnosis finds that neither ordinary assignment reads the staged operational skill, while the runtime persists provider environment in session state. The new common repairs expose skill metadata/path and omit persisted env; strict document and credential guards stay intact. [Inspectable diagnosis and retained hashes](https://github.com/paperclipai/paperclip/blob/9f654db4541d3d002769c988f6e51fc0b08dadbd/doc/plans/2026-10-03-legacy-acp-claude-readiness.md). Current repair head `de0965984ff3edf611ae6d0e7ca5c7d5ae3947bb` incorporates master `569c7203aa24b95440682983ce7940ba1d4247bd` (merged #14961/#15007). All 222 affected adapter tests, adapter-utils/E2E typechecks, and final 96 variant/grader/retry calibrations pass. The frozen historical comparator is `c25697f4260b6f3adfea143c3ae9932e2f42986d`: 8,280 of 8,291 paths identical, exactly two production instruction paths plus nine declared unit expectations differ. The operational skill/discovery/environment repairs, selected model/profile/task/core grader/auth/permissions/retry policy are identical. Both actual launcher prepare→verify admissions pass with zero providers. [Immutable manifest and exact receipts](https://github.com/paperclipai/paperclip/blob/9f654db4541d3d002769c988f6e51fc0b08dadbd/doc/plans/2026-10-03-legacy-acp-claude-evidence/manifest.json). One original legacy ACP Claude cell per variant is authorized, with enforced single campaign attempts, 12-minute deadlines and company/agent 1,000-cent hard stops; every product recovery run/cost is counted. Actual live outcomes are pending. Current normal CI has one failed server shard and failed aggregate verify under diagnosis; other normal gates including typecheck/build/Rust/all eight browser shards pass. Fresh review completed successfully; the valid historical startup/resume masking finding was fixed with per-invocation task/chat checks and strict complete-snapshot capture, calibrated and resolved. Prior heads, failures and campaigns below remain historical evidence, not checks on this repair head. - Prior head `36aa4d81c49a1a8f6f04b1a068fae19aa901955f` is replayed on merged hiring master `862a5758ba0e88a33232c1f1fa645e85c38a3113`. All 52 current-head checks pass with two intentional Storybook skips, including repository typecheck/test/build and the browser shard. Fresh Greptile is 5/5 with zero unresolved review threads. Exact-head stock prerequisites pass 599 assertions (598 TypeScript + 1 Rust), all six gates and retained receipt verification, zero providers/source errors. Fingerprint `a7f5a22d860a88fe20cce213c6d5e0004788f32c8363930729aea4fd740ad16d`. Combined catalog/hiring calibrations pass 67 assertions, E2E typecheck and 26-cell stock discovery pass. Canonical contract/inventory checks and the later issue-derived reference calibration are retained; that reference-only follow-up is not live-qualified by earlier frozen runs. - Prior full repository typecheck/build passed. The complete local Vitest run executed 14,956 tests: 14,870 passed, 83 skipped, three timing failures. All three affected files passed unchanged narrow reruns; original failures remain retained. Current-head CI now passes the full general checks; the original local failures remain retained. - The original 24-pair default-manual/shared-prompt comparison has two new overall classic Claude/OpenCode document-delivery failures plus an additional legacy ACP Claude document loss beneath an unchanged credential-guard failure (not closed by later runs), two newly passing OpenCode ordered cases, seven unchanged failures and 13 unchanged passes. Equal 15/24 totals do not establish behavioral equivalence. [Complete original report](https://github.com/paperclipai/paperclip/blob/875f4c397d9e8c3f12f39dedd59abaf1eaf5236e/doc/plans/2026-10-02-stock-harness-live-comparison.md). - The skill-only repair holds the eight-word manual/shared prompts and merged #14920 fixed. All four matched profile configurations and 203 fixture/behavior files match. Candidate `abd0b628ca642c09a54a4edc56a5227402f6686e` varies only the two skill sources against baseline `bc83fe030234439ac51279502a28803958963e2e`. [Candidate workflow](https://github.com/paperclipai/paperclip/actions/runs/37060885547) and [baseline workflow](https://github.com/paperclipai/paperclip/actions/runs/37060888047) each pass 571 exact-source prerequisites before providers; all eight cells clean up successfully. Failed campaigns publish successfully and remain failed. - Repair pairs: Claude original Fail → Pass; Claude explicit Pass → Pass; both OpenCode cases Fail → Fail. Explicit OpenCode's handoff worsens beneath the unchanged failing UI-link grade: baseline gives a clickable API URL, candidate gives a code-formatted path without an anchor. The request's usable-link wording is narrower in the UI-only oracle. [Complete repair report and safe projection](https://github.com/paperclipai/paperclip/blob/875f4c397d9e8c3f12f39dedd59abaf1eaf5236e/doc/plans/2026-10-02-legacy-document-skill-repair.md). - The subsequent narrow stock metadata/link correction has two matched Pass → Pass cases, zero new machine failures/passes and no pending pairs. Both original-case handoff links remain deficient: candidate uses a wrong PAP prefix, baseline supplies a bare prefix-less slug path; the preserved original oracle only requires a durable document. Both explicit clickable UI-link cases pass revision/content/link grading. All four exact-source 587-check gates, single assignment runs and cleanup pass. This does not establish fix causality because baseline also succeeds. [Candidate workflow](https://github.com/paperclipai/paperclip/actions/runs/37069547401) freezes `fe9dc1e3c518825242ed889ab9c8352986f8c2ed`; [matched baseline](https://github.com/paperclipai/paperclip/actions/runs/37069552374) freezes `0d7ecfa96d72fba79b7f0a25052b42c0686c0488`. This is a skill-only comparison with reduced manuals/shared prompts held constant, not a repeat of the historical-manual comparison. Only original and clarified explicit classic OpenCode cases are selected, two per variant/four expected turns. 8,242 other tracked files and both profile hashes match; protected workflows admit each exact source before credentials. [Complete qualification report](https://github.com/paperclipai/paperclip/blob/74d0d3d945f4c52d0814b5a845ab5bd09f33cd6b/doc/plans/2026-10-02-opencode-skill-routing-link-qualification.md). Candidate original loads Paperclip/reference before saving publicly; baseline original loads it after writing locally, then saves publicly within the same assignment. Reported cost totals are $0.0107824490 candidate / $0.0107909015 baseline, with unmetered runtime. The later reference-only issue-derived link correction is provider-free calibrated and **not live-qualified** by these frozen runs; no further paid runs. - Retained tool calls show the repaired original OpenCode assignment loads only its assigned output skill before writing locally. Operational Paperclip is first loaded during automatic disposition recovery; its early recipe is visible then, but it never saves the missing document. Explicit candidate loads Paperclip and reads the new reference before saving successfully. All nine actual runs are counted. Reported LLM totals are $0.3802537209 baseline and $0.4918990161 candidate; local runtime is unmetered. - Initial setup, packaging, cancelled/missing-cell recovery, callback test and relative-output attempts remain retained. No completed provider failure was rerun. Frozen measurement branches are unchanged by later canonical metadata maintenance. - Run `pnpm test:e2e:runner:stock-harness`, `pnpm test:e2e:runner:unit`, and `pnpm test:e2e:runner:typecheck`. Select `stock-harness` explicitly for paid execution; it is excluded from `--all`. Prior-head integration: `36aa4d81c49a1a8f6f04b1a068fae19aa901955f` replays this PR on merged hiring #14985 (`862a5758ba0e88a33232c1f1fa645e85c38a3113`), preserving the four explicit custom-CEO-bundle checks, minimal generic manual boundary, and both suites. The combined fixture catalog and hiring calibrations pass 67 assertions; exact-head stock prerequisites pass 599 assertions (598 TypeScript + 1 Rust), all six gates and retained-receipt verification, zero providers/source errors, fingerprint `a7f5a22d860a88fe20cce213c6d5e0004788f32c8363930729aea4fd740ad16d`. E2E typecheck and 26-cell stock discovery pass. Fresh current-head CI passes all 52 checks with two intentional skips, and fresh Greptile is 5/5 with zero unresolved review threads. The prior source-plan browser failure is retained: a deterministic process fixture replayed its last `fixture:plan` command on `chat_task_completed`, writing revision 2 with identical body after the approval handoff. This was not paid provider execution. Rebased current-head CI passes the same assertion without an old-head retry or a change to that browser fixture. The merged hiring change was measured separately on immutable matched unions, with this reduced/shared/operational context and native completion guidance held constant. [Complete original two-profile report](https://github.com/paperclipai/paperclip/blob/f0512647656be78e48abd8c22a3078db8bf6bcd2/doc/plans/2026-10-02-hiring-template-live-comparison.md): [candidate](https://github.com/paperclipai/paperclip/actions/runs/37075466208) / [historical baseline](https://github.com/paperclipai/paperclip/actions/runs/37075469463), 705 provider-free prerequisites each. Both pairs are unchanged Fail → Fail on the exact-five count, with six core delivery checks passing all four cells; 28 actual successful runs include eight automatic completion wakes, zero retries, four successful cleanups. Source-read coverage is uncomparable, actual model charges unknown. Separately versioned provider-free accounting remains analytical work; original verdicts are preserved. This does not rerun or qualify the completed default-manual or native campaigns. ## Risks - Legacy ACP Claude's additional delivery loss is not closed by any later matched run and blocks the no-extra-failing-behavior merge criterion. Legacy document delivery may have relied on the prior manual/shared prompts. The early skill repair improves Claude in one trial; the later OpenCode pairs pass in both variants and cannot establish causality or robust recovery. Both original-case links remain deficient beneath the storage-only grade. The later issue-derived reference correction has only provider-free validation. Native finish/block descriptions must not be supplied to legacy agents. - The comparison holds merged native Codex fix #14920 constant; it cannot measure that fix's before/after task performance. - These bounded skill/context/chat workflows do not measure general coding quality. Unrepresented providers remain unqualified. - Saved manuals and old Codex sessions are not automatically migrated. Codex through ACP still has a separate base-instruction follow-up. ## Model Used OpenAI Codex, GPT-6 family as identified by this session. The exact deployment ID and context-window size are not exposed. The assistant used reasoning, repository tools, code execution, and delegated PR/eval work. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass (relevant suites and all three unchanged narrow reruns pass; complete-run timing failures retained in Verification) - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green on the new repair head (prior-head checks retained above) - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups on the new repair head - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-03 12:32:42 -05:00
Devin FoleyandPaperclip	4abff286c2	fix: retain resolved ACP execution timeout metadata (#14986) ... ## Thinking Path > - Paperclip manages agent work through adapters and heartbeat runs. > - ACP adapters resolve a timeout for the selected execution target. > - An untouched sandbox timeout uses a four-hour default. > - Heartbeat finalization rebuilt the metadata from the stored zero. > - This made a timed-out sandbox run report an effective timeout of zero. > - This change retains the adapter's resolved policy for accurate run diagnostics. ## Linked Issues or Issue Description **What happened?** ACP sandbox runs with `timeoutSec: 0` use the four-hour default. Their terminal metadata reports `effectiveTimeoutSec: 0` and `timeoutSource: config` because heartbeat finalization only reads the stored agent configuration. **Expected behavior** The result must report the policy the adapter used: `14400` and `sandbox_default`. Explicit limits, fractional limits, explicit unlimited overrides, and local defaults must keep their resolved values. **Steps to reproduce** Run an ACP adapter on a sandbox target with `timeoutSec: 0`. Compare the start log's four-hour policy with the terminal result's effective timeout. The new tests exercise the adapter result and the heartbeat metadata merge without waiting four hours. **Paperclip version or commit** Reproduced from `6eaf218924f0a89faf1c02eb0d6877a6c5c8a2cb`. **Deployment mode** Self-hosted server with an ACP sandbox execution target. Searched open timeout and metadata issues and PRs. Related #14804 exposes timeout configuration in forms; #14496 proposes a default policy; #14833 addresses CLI session retention. This PR changes only ACP result metadata. ## What Changed - Retain the resolved timeout in the ACP result after settlement. - Use validated adapter resolution when merging terminal timeout metadata. Preserve config fallbacks for older adapters and the HTTP millisecond policy. - Test sandbox defaults, explicit and fractional limits, explicit unlimited overrides, local defaults, malformed metadata, and unchanged cancellation fields. - Document the result fields and their meaning. ## Verification - `pnpm -r typecheck` passed. - `pnpm build` passed. - Stop metadata tests: 23 passed. - Reporter and diagnostic suites: 84 passed; two real-Sentry-SDK tests skipped because the optional SDK is not installed. - ACP engine suite: all 206 tests passed with a deterministic local `gemini --version` shim. Ambient host CLI probes made the existing Gemini session-resume fixture intermittent (one assertion failure in each of two broad runs); an isolated 15-case rerun and the clean-base 206-test suite also passed. No assertion or timeout was changed. - `pnpm test:run` is in progress. This PR does not claim a complete local suite pass. - Independent review found no blocking issues. The tests cover real adapter emission and the real metadata merge separately. ## Risks Low runtime risk: this changes result diagnostics. It does not change timeout values, cancellation acknowledgement, cleanup, checkpoint safety, retries, or provider operations. It does not fix the cause of a quiet or long-running tool. Older stored results are not rewritten. The new source values apply only when an adapter returns a valid resolution. ## Model Used OpenAI GPT-6 with reasoning, repository inspection, code editing, and test execution. The deployment-specific model ID and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [ ] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-02 16:09:36 -07:00
DottaandPaperclip	2ec82c5774	fix(runner): preserve task context when tool connections change (#14963) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Agents use tools through company-scoped connections and provider sessions. > - Resolving a tool connection currently forces a fresh session even when the provider can load new tools into the existing conversation. > - A fresh provider conversation can receive too little history to continue the task. > - This pull request adds explicit tool-refresh capabilities and uses them in both runner paths. > - Fresh attempts receive bounded task history with source IDs and retrieval instructions. > - The benefit is that agents can continue the same task after a connection changes. ## Linked Issues or Issue Description **What happened?** A resolved tool connection forced a fresh provider conversation. The new conversation could lose the original goal and prior answers. Claude also rejected resume when only the MCP server set changed. **Expected behavior** Resume the provider conversation when its harness can refresh tools. When a fresh session is required, supply enough bounded history to continue the task. Preserve company, agent, task, workspace, model, instruction, and skill checks. **Steps to reproduce** 1. Start a conversation and agree on a task and its constraints. 2. Request and connect a tool needed for the task. 3. Continue the conversation after the connection resolves. 4. Check that the agent remembers the task and can use the new tool. **Paperclip version or commit** The bug was reproduced on master at `c46e41e81`. This branch is rebased on current master. **Deployment mode** Self-hosted server. Both legacy adapters and the native runner are affected. Related public work: Refs #13282 for task-backed conversations. Refs #13057 for the broader session-compaction proposal. Refs #14659 for another report about local CLI session continuity. This change fixes tool-connection continuation. Provider authentication repairs keep their existing recovery behavior. ## What Changed - Expose tool-refresh support in native harness descriptors and legacy adapter metadata. - Request tool refresh after connection resolution. Keep provider authentication repair as a fresh-session wake. - Reload current tools and credentials while retaining supported Claude, Codex, Grok, and other provider conversations. - Allow MCP-only changes during qualified native recovery. Keep all other compatibility checks. - Refresh managed-provider and ACPX tool bindings when attaching a new run. - Add a fresh-session handoff for both runner paths. Bound database reads, excerpts, and the final packet to 24,000 bytes. - Include the original request, recent messages, decisions, plans, prior answers, and source IDs. Mark omitted content. Apply reset boundaries, wake cutoffs, quarantine, and secret redaction. - Add regression tests and document the capabilities and handoff behavior. ## Verification - `pnpm -r typecheck` and `pnpm build` passed. Rust formatting passed. - Final review fixes passed 314 server tests, 333 adapter utility tests, 139 native-session runtime tests, and 12 managed-provider Rust tests. They verify historical quarantine, raised budgets across attachment, no history reads on successful resume, and handoff delivery on fresh retry. - Broader branch verification also passed 1,401 adapter utility tests, 1,047 runner TypeScript tests, 43 Grok adapter tests, and 311 Rust core tests. - Live Claude CLI and Grok ACP probes preserved the provider session ID, recalled a prior task constraint, and called a newly added read-only MCP tool. - GitHub CI passed on `b21486d18084a7aa4cafbe8e012f7cad6585d9cc`: 55 successful checks and 4 skipped checks. This includes all test shards, all eight browser shards, runner checks, and the Grok clean public npm install canary. [CI run](https://github.com/paperclipai/paperclip/actions/runs/37057514976). - A full local test attempt encountered a separate Git snapshot timeout. All affected local suites passed after the final edits, and the full CI test gates passed. - Review the capability matrix in `packages/paperclip-runner/README.md`. Repeat the four reproduction steps with a supported provider and with an unsupported harness. ## Risks - Provider tool refresh can fail. Existing recovery falls back to a fresh conversation where policy permits it. - A new transport can replace an old process while preserving the provider conversation. Tests cover current credentials and unchanged identity. - Long history can omit older context. Explicit markers and source IDs let the agent retrieve needed context within task scope. - Unknown and unqualified harnesses use the fresh-session path. No database migration is required. ## Model Used OpenAI Codex, GPT-6, with reasoning, tool use, code execution, and live provider testing. The exact model ID and context-window size are not exposed in this session. Claude and Grok also ran as test subjects. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-02 15:11:44 -05:00
DottaandPaperclip	7a52dcdc74	fix: repair MCP validation and cancelled execution recovery (#14951) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The tool gateway gives agents access to connected services. Recovery controls what happens when a run stops. > - Generated tool names can exceed the provider limit after the MCP client adds its prefix. > - The same invalid definition can fail each automatic retry. A cancelled run can also hold saved messages without showing its cause. > - This pull request bounds tool names, stops configuration retries, and retains cancellation evidence. > - It shows the stopped run and admits saved input only after the existing safety checks pass. > - The benefit is a clear recovery path that preserves operator Stop and prevents duplicate message delivery. ## Linked Issues or Issue Description **What happened?** A long connected MCP tool name makes the provider reject the entire request. Automatic recovery repeats the invalid request. Separately, unexpected legacy cancellations can leave saved input behind a recovery hold. The notice does not identify the stopped run or its cause. **Expected behavior** Complete MCP names fit the provider limit. Tool-definition errors require configuration repair. Cancelled runs retain their source and reason. The recovery notice shows the cause and saved-message count. Verified unexpected cancellations can start a fresh turn through the existing admission checks. **Steps to reproduce** 1. Assign an App gallery connection with a long application key and tool name to a Claude agent. 2. Start a run. The provider rejects a name over 128 characters, including its MCP prefix. 3. For cancellation recovery, stop a legacy provider turn without an operator Stop request and send a user message while the recovery hold is active. 4. Inspect the recovery notice and the deferred message queue. **Paperclip version or commit** Rebased onto master at `cf8ad63c806685bfd7c48e3ed4a919d61a7c55f1`. **Deployment mode** Hosted or self-hosted server with legacy Claude or Codex execution. Related public work: - Refs #14017. That PR caps name segments. This PR preserves existing short names and uses stable hash aliases for long complete names. It also covers classification and recovery. - Refs #4510. That PR adds a cancellation-source column. This PR records bounded evidence in the existing run result, without a migration. - Refs #12552 and #4506. Those PRs suppress recovery after operator cancellation. This PR preserves operator intent and uses the existing continuation gates. ## What Changed - Bound gateway names with the full provider prefix in the 128-character budget. Retain the original upstream tool name for dispatch and permissions. - Classify invalid tool definitions as configuration failures before diagnostic redaction. Stop automatic retries and continuation attempts for that error code. - Persist cancellation source, expectedness, initiator, reason, and time. Preserve recorded Stop intent when adapter results arrive. Report unexpected started cancellations with closed diagnostic labels. - Show the run cause, saved-message count, and Inspect run link. Offer Continue for eligible unexpected cancellations. Require verified provider stop, empty tool inventory, ownership, and the existing pause, budget, approval, and dependency gates. Use the existing queue for single delivery. - Add regression coverage and update the execution, MCP gateway, and run-log documentation. ## Verification - `pnpm -r typecheck` and `pnpm build` passed. - `pnpm check:token-gates` passed. - Ran `pnpm test:run` and completed its workspace and serialized groups. Initial resource and timing failures passed on isolated reruns. All 149 serialized route suites passed. - Reran the changed server, adapter, and UI suites after the rebase. Coverage includes long-name upstream dispatch, configuration retry suppression, cancellation evidence retention, privacy labels, oversized run projection, and concurrent saved-message delivery. - `pnpm test:e2e tests/e2e/legacy-failure-continuation.spec.ts` passed all six browser scenarios. The recovery notice shows the run cause and inspection link, and each recovery entry point reaches one new response. - Added database-backed checks for active, removed, paused, unavailable, and disabled chat connections. The final continuation and recovery-notice suites passed 167 tests. Externally bound chats hide board Continue and show a usable next action. - All 55 GitHub checks passed on `42afbf1371dcaeb72646e3d8f65c19ff7cddf8de`. Two unrelated Storybook jobs were skipped by their normal conditions. Greptile reviewed that commit at 5/5 with no findings and no open review threads. ## Risks - Long tool names change to aliases. Existing short names stay compatible. The original connection and upstream name remain the dispatch authority. - Invalid tool definitions no longer get automatic retries. An operator must repair the configuration before a new attempt. - Continuation changes apply only to positively identified unexpected legacy cancellations with complete empty tool inventory. Operator Stop, unknown historical cancellations, outstanding tools, and unverified provider termination keep their holds. - No database migration. The added projection fields are optional. Cancellation reason and initiator IDs remain local run evidence; Sentry receives only closed source and initiator-type labels and expectedness. ## Model Used - OpenAI GPT-6 through Codex, with reasoning, repository editing, shell execution, and GitHub tool use. The runtime does not expose the exact model variant or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-02 13:47:59 -05:00
Devin FoleyandPaperclip	0ea6b10967	Record ACP activity and workspace restore failure evidence (#14665) ... ## Thinking Path Paperclip records terminal run failures for operators. A timeout's own log and cleanup output update the run's last-output timestamp, so that timestamp can make a long-silent provider look active. Snapshot runtime activity before finalization and include the saved workspace restore classification to make the next failure actionable without copying tool payloads. ## Linked Issues or Issue Description **What existing behavior does this improve?** Terminal run diagnostics in the existing opt-in Sentry integration. **Current behavior** Reports cannot distinguish runtime events from finalization logging and omit the already-persisted workspace restore code. A later successful run also does not establish that earlier workspace files were restored. **Proposed behavior** Record runtime-event age/count and pending-tool inventory at finalization, before status reads and cleanup. Forward only finite counts, a completeness boolean, and known restore codes through the existing reporter. **Reason and benefit** Operators can distinguish a silent turn with unfinished tools from recent runtime activity and see restore failures without retrieving private run output. Neither signal certifies productive work or successful recovery. **Breaking changes** None. Error grouping, execution deadlines, cancellation, recovery policy, and the Sentry opt-in remain unchanged. Related diagnostic work: #14573, #14575, #14639. ## What Changed - Snapshot ACP activity before success/failure finalization, including thrown relay failures. - Forward bounded numeric/boolean evidence and shared workspace restore codes; exclude commands, tool IDs, paths, and arbitrary result data. - Document limitations and test silence, empty streams, timeout, cleanup delay, incomplete tool inventory, and privacy. ## Verification - `pnpm -r typecheck` passed after the final implementation. - Changed suites: 252 tests passed; all 29 database reporter tests subsequently passed after restoring the embedded-Postgres package library symlinks. The migration test also passed (30 database cases total). - `pnpm build` passed during implementation. Final head `fe78dba6f592b1abccac7cdbf341bd2e0b0d30cb` passed all 53 CI checks, including complete test coverage, typecheck, build, and browser/runner gates; two unrelated checks intentionally skipped. - Full local test attempts initially hit missing embedded-Postgres library symlinks; the dependency setup was repaired and database tests passed. Duplicate local full-suite runs were stopped after full CI completed. This PR does not claim a completed full local suite. - Review regression: completed, failed, and cancelled tools are excluded from the pending count; focused activity/timeout tests and adapter-utils typecheck passed. - Reviewed the diff for secrets, customer data, and internal references. ## Risks Low risk, diagnostic-only. The existing tool inventory is incomplete for some runtime events, so the report carries its completeness flag. Event age is measured at finalization and does not prove useful work or identify the underlying provider failure. No schema changes or new capture gate. ## Model Used OpenAI GPT-6 via Codex, with repository inspection, code execution, and tests. Exact model build identifier is not exposed by this session. ## Checklist - [x] Thinking path and model are specified - [x] Checked ROADMAP.md; this is a maintenance correction, not planned feature work - [x] Searched for duplicate and related PRs - [x] Described the issue using the enhancement template - [x] No internal issue references, customer data, or private instance links - [x] Descriptive branch name - [x] Focused regression tests pass - [x] Added tests and updated documentation - [x] Risks documented - [x] Required validation and CI gates are green (full suite validated in CI; local scope documented above) - [x] Greptile is 5/5 with no unresolved findings - [x] I will address review comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-30 14:27:53 -07:00
3 people	0be2afcca6	feat(ui): improve task composer controls and pending input (#14322) ... ## Thinking Path > - Paperclip lets operators assign tasks to AI agents and review their work. > - The task composer controls the next message and its assigned agent. > - Operators needed a way to choose that agent's model and effort without leaving the composer. > - The old mode selector, upload button, and input cards made the mobile composer crowded and hid normal messaging during a pending decision. > - Harnesses publish different model and effort capabilities, so the picker must follow the selected agent. > - This pull request adds one responsive composer flow, keeps pending cards visible above it, and protects Codex ACP authentication in the local test path. > - Operators can choose run settings, send a message, and answer a pending card as separate actions. ## Linked Issues or Issue Description **Subsystem affected** Task composer UI, issue thread interactions, Codex ACP credential handling, and Storybook. **Problem or motivation** The composer did not expose model or effort for the selected agent. Mobile actions wrapped poorly. Pending questions and confirmations replaced the composer. A local Codex ACP test could also reuse host authentication after the managed key was removed. **Proposed solution** Put assignee search, model search, exact model IDs, effort, and fast mode in one picker. Use a mobile dialog. Replace the direct-upload plus action and separate mode selector with an Add menu and removable Plan or Ask chips. Place pending interaction cards above the usable composer. Keep these cards pending after an ordinary message unless their creator asks for comment superseding. Replace managed ACP auth files atomically and isolate the test key from host credentials. **Roadmap alignment** ROADMAP.md does not list an overlapping composer milestone. This change improves the existing task and review flows. ## What Changed - Added the combined assignee, model, and effort picker to both task composers. Search matches agent name, role, and harness. The server uses a curated Codex list by default and honors instance-declared models. Manual IDs remain available. - Added an effort slider for known model capabilities, a conditional Codex fast control, and reset. The picker opens in a modal on mobile. - Added the Add menu for files, supported goals, Plan mode, and Ask mode. Plan and Ask are exclusive removable chips. Keyboard mode cycling remains available. - Adjusted mobile spacing, avatars, wrapping, and Send placement. Removed the composer divider. - Moved pending question, confirmation, review, and related cards above the composer. Ordinary comments now leave question and confirmation cards pending by default. The onboarding prompt retains explicit comment superseding. - Updated the Storybook composer group with responsive states and the production picker. Added UI, service, route, and browser regression coverage. - Isolated Codex ACP API-key authentication, skipped subscription auth merge and shared-home copy-back for remote API-key runs, and replaced the managed auth file atomically. ## Verification - `pnpm -r typecheck` — passed on the final local head. - `pnpm check:token-gates` — passed on the final local head. - `pnpm exec vitest run server/src/__tests__/adapter-models.test.ts ui/src/components/task-chat/ComposerRunSettingsPicker.test.tsx` — 31 tests passed, including role and harness search, declared Codex models, and filtering general OpenAI models. - `pnpm exec vitest run server/src/__tests__/issue-thread-interactions-service.test.ts` — 74 tests passed. - `pnpm exec vitest run packages/adapters/codex-local/src/server/acp.test.ts` — 42 tests passed, including remote API-key copy-back isolation. - `pnpm test:run` — attempted locally; the embedded PostgreSQL test database could not initialize on macOS. The isolated `heartbeat-run-event-sequencing` suite reproduced that environment failure. GitHub CI runs the full test matrix for this head. - `pnpm build` — passed on the final head. `pnpm build-storybook` passed after the last UI change; only server code, tests, and docs changed afterward. - Live local test drive — Codex ACP ran a task with a managed API key. The test agent was restored to its default ACP configuration afterward. - Review the interactive stories under the top-level Composer group with `pnpm storybook`. Check a narrow desktop width and mobile Plan, Ask, picker, and pending-question states. ## Risks - A pending card stays open when an ordinary comment changes the discussion. Its creator can set `supersedeOnUserComment: true` when a new comment should replace it. - Model and effort overrides persist on the task until reset or changed. An unlisted manual model ID may fail when the provider runs it. - Some harness catalogs do not report effort support. The picker hides effort for those models. - No database migration is required. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used OpenAI GPT-6 via Codex. This runtime does not expose the exact model ID or context window to the task. The model used code execution and browser tools. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> Co-authored-by: OpenAI Codex <codex@openai.com>	2026-09-28 23:02:39 +00:00
DottaandPaperclip	992f720262	fix: make runner task context ownership explicit (#13753) ... <!-- Write all pull request text in Simplified Technical English (ASD-STE100). --> ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Task descriptions, comments, continuation data, skills, and execution rules enter several agent adapters. > - The same source can be rendered by more than one automatic input carrier. > - Failed resumes can also rebuild input from stale or compact context. > - This pull request gives each Paperclip-owned source one delivery owner and preserves the required transport boundaries. > - It adds deterministic adapter, interaction, runner, and browser tests for these boundaries. > - The benefit is more predictable context delivery with explicit evidence for later live qualification. ## Linked Issues or Issue Description Related: #13144 removes a duplicate environment payload and bounds wake lists. Related: #11360 addresses Hermes resume behavior. This pull request preserves compatible active-session formats while repairing context ownership and stale question creation. **What happened?** Task descriptions and comments could enter more than one automatic context block. Native transports could wrap a complete model input in a second task envelope. Some legacy and gateway adapters could omit the owned assignment on ordinary tasks or rebuild a failed resume with stale compact context. A continuation could also request a question after newer human comments had arrived. **Expected behavior** Each task or comment source has one automatic model-facing owner. Distinct comment IDs and repeated wording remain distinct. Fresh fallback attempts rebuild the required full context. A question request is rejected when newer queued human direction makes it stale. Harness access policy remains owned by execution configuration. **Steps to reproduce** 1. Build a task with a description and current comments. 2. Capture the actual adapter or runner input. 3. Compare source ownership and task-envelope nesting. 4. Queue a human comment before a continuation requests a question. 5. Trigger a failed resume and inspect the fresh retry input. 6. Run the focused adapter, interaction, runner, and browser checks. ## What Changed - Add shared prompt-section selection at the provider-attempt boundary. - Deliver owned assignment context through native, legacy CLI, ACP, gateway, cloud, Pi, Kimi, Grok, Gemini, OpenCode, Cursor, OpenClaw, and Hermes paths. - Rebuild full or compact context after resume recovery changes the attempt. Add native and Claude ACP tests of actual recovery requests. - Preserve custom templates, loaded instruction files, execution policies, and older active-session formats. - Record continuation source metadata and reject stale question creation under the issue-row lock. - Add explicit Product E2E context-integrity profiles, prerequisite gates, credential-isolation checks, and report fixtures. - Bypass service-worker forwarding for same-origin Vite development modules. A real Chromium test fails with resource exhaustion before the repair and passes after it. Production asset caching keeps its existing policy. - Add browser diagnostics and service-worker module-loading regressions. - Add an explicit zero-retry eval option. The default retry behavior remains unchanged. Each campaign records its effective policy. - Remove the model-facing working-directory sentence from four prompt builders. Existing workspace, sandbox, permission, and custom-template configuration remains unchanged. - Align the everyday workflow assertion with the current 47-entry catalog. Compared with current upstream master, the branch carries the context-ownership implementation and its tests, the explicit context-integrity catalog and evidence harness, and the focused browser regression checks. ## Verification **Merge assessment:** focused regression evidence supports merge. This is not full completion of the original broad qualification matrix. The maintainer has authorized merge after fresh verification of the master integration. - Current head: `bbd52f82114eabf09bc7b1a7e97d54a5b43bbc00`. This integrates current master `2f585ef26a1814fa209715242d1ca791b63e4c4e`. All 14 conflicts are resolved. Cancellation checks, workspace finalization, native Grok support, and both sets of tests are retained. - Current-head Greptile: **5/5**, with no blocking findings. The review names this exact commit. All **59 reported checks are terminal: 55 successful, 4 skipped, zero pending or failing**. This includes the full root general and serialized suites, separate runner checks, typecheck, build, canary, browser E2E, Docker, and security checks. The successful legacy security status is included in that total. - After integration: workspace typecheck and full build passed. Separate runner checks passed: **2,160 TypeScript tests (10 skipped), 582 Rust tests, and 39 preparation checks**. Other passing checks include 621 Product E2E harness units, 376 focused shared/adapter tests, 160 real-database/API tests, 86 Hermes tests, 18 browser-support checks, and Product E2E typechecking. The complete root suite passed in CI. The duplicate local monolithic root run was stopped after that CI result; it is not counted as a completed local pass. - New native recovery coverage retains full assignment, completion contract, and explicit skill selection after safe replacement, for old and prepared input formats. Full native session test file: **136/136 passed**. - New Claude ACP coverage captures actual fresh, resumed, and missing-session fallback requests. It verifies one assignment copy, comment order, identical text under distinct comment IDs, and full fallback context. Full file: **33/33 passed**. Both affected TypeScript checks passed. - Existing deterministic tests cover source revisions, approval and trust boundaries, completion validation, custom templates, compatible sessions, standalone driver wrapping, and maintained adapter transport requests. - Provider-free browser support: **17/17 passed** after the master merge. Service-worker unit tests: **33/33 passed**. The module-overload regression failed before the repair and passed after it in real Chromium. ### Fresh live comparisons The new batch ran exactly four Product E2E attempts. **All four passed on the first attempt; no retries.** Each has six terminal matchers plus the existing browser lifecycle and invariant checks. | Exact case ID | Control | Candidate | |---|---|---| | `core-compatibility.runner-codex.local.plan-revise-accept` | Passed | Passed | | `local-session-integrity.runner-acpx-claude.local.structured-question-restart-resume` | Passed | Passed | The plan case checks a revised canonical plan and revision-bound approval before completion. The question case restarts the server before submitting the answer, then verifies the continuation completes. Control source is `dfa4e1bda8d50a1a01746603251a9128dbe9d0d6`. Candidate source is `79fcdb5dece501d28064ea9da306603881b46f0c`. They use identical frozen definitions and provider versions: Codex `0.156.0` with `gpt-5.6-sol`; ACPX `0.13.1` / Claude ACP `0.73.0` with `claude-sonnet-5`. The September 24 head added master browser recovery and test-only changes. The September 28 head also integrates newer master changes, including cancellation, workspace finalization, and native Grok. These are frozen-source live results, not exact-head live runs. The candidate received one description copy where the control initially received three. The submitted initial plan envelopes were 7,969 versus 19,097 characters. Question envelopes were 7,592 versus 18,919. These are structural measurements, not whole-provider token or dollar savings. ### Earlier evidence and failed attempts - The preceding fresh batch has four effective passing pairs: OpenCode comment continuation and assigned skill, native Codex comment continuation, and native Claude comment continuation. It retains **11 attempts: eight passed and three failed**. - Original failures remain recorded: missing local PostgreSQL library links before task creation; host-sleep cleanup after task/page checks passed; and a Claude **control** session-open rejection before a model turn. Setup was repaired identically on both worktrees. The permitted unchanged infrastructure retries passed. The underlying Claude provider startup error was not retained and remains unknown. - Older R2 retains **17 passes and one failure** across 18 attempts, including eight both-pass native/legacy Codex/Claude pairs. Its OpenCode blank-page failure led to the service-worker repair. R2 is historical evidence: master changed the native fixed prompt and removed duplicate wake environment data afterward. - The September 24 CI run initially failed one unrelated preview readiness test (`ECONNREFUSED` on its local fixture). Its test and production code match master. Isolated local verification passed **28 tests, 3 skipped**. One unchanged CI retry passed the full shard: **831 passed, 1 skipped**, including all **31 preview-exposure tests**. The aggregate CI gate passed afterward. The precise startup cause remains unknown; a port race is a hypothesis, not a proved cause. ### Limits The original wider profile/workflow matrix, repeated trials, and remote Daytona qualification are incomplete. These results support a focused merge recommendation, not statistical equivalence or universal harness qualification. Some usage receipts are missing in both variants, so no token or dollar savings are claimed. The $500 ceiling was preserved using conservative allowances; failed attempts and unknown charges remain in the ledger. Reproduce the focused additions with `pnpm exec vitest run packages/adapters/claude-local/src/server/acp.test.ts` and `pnpm --filter @paperclipai/paperclip-runner exec vitest run src/native-session-runtime.test.ts`. Full checks use `pnpm -r typecheck`, `pnpm test:run`, `pnpm build`, and the separate runner checks. Paid evals require the frozen definitions, profiles, and credentials; do not use `--all` as a substitute for the selected cases. ## Risks - Context placement changes can affect model behavior. Deterministic checks cover the selected paths, but live qualification remains incomplete. - The stale-question guard can reject a request when queued human comments arrived during the run. This is intended. - New stored inputs and model envelopes retain compatibility readers for older active sessions. - Custom templates may intentionally repeat content. - Removing a model-facing working-directory sentence does not change filesystem, command, sandbox, or permission configuration. - The worker bypass applies only to same-origin development module paths. Cache-policy tests preserve private-response handling and production asset caching. Mounted HTTP fixture changes remain test-only. - This PR does not claim measured token savings or statistical equivalence across every harness. ## Model Used OpenAI Codex, exact model gpt-6-astra, with repository tools and code execution. Bounded supporting work used gpt-5.6-luna and gpt-6-luna. The serving context-window size is not exposed in this task. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have described the issue in-PR using the required issue fields - [x] I have not referenced internal/instance-local Paperclip issues or links - [x] My branch name describes the change and contains no internal ticket id - [x] I have run the focused local checks and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect these changes - [x] I have considered and documented risks above - [x] All current-head Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups for the current head - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-28 14:49:14 -05:00
DottaandPaperclip	cbc5132e6c	fix(adapters): expose a verified provider stop before workspace restoration (#14311) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Agent adapters own local or remote provider processes. > - Run cleanup must know when the final provider process has stopped. > - A remote timeout or a lost transport does not prove that the provider stopped. > - Retried provider invocations also make an earlier stop signal stale. > - This pull request adds a verified final-invocation stop callback before workspace restoration. > - The dependent instruction revision change uses that boundary to preserve private instruction edits safely. ## Linked Issues or Issue Description **What happened?** Adapter completion did not expose a reliable point between provider shutdown and workspace restoration. Cleanup could lose provider-written files, or treat a remote timeout as proof that a process stopped. **Expected behavior** Cleanup runs once after the final provider invocation has a verified stop receipt and before workspace restoration. An incomplete remote command keeps collection pending. **Steps to reproduce** 1. Run a remote provider that returns a timeout without a numeric exit code. 2. Let the adapter return or retry the provider. 3. Attempt to collect provider-written files during cleanup. The adapter has no verified final-process boundary to use. This is the prerequisite for the stacked canonical instruction revision pull request. It has no database or UI dependency. Related #13291 verifies remote termination for later recovery; this change exposes the earlier adapter-owned stop boundary before workspace restoration. The scopes do not duplicate each other. ## What Changed - Add a stop callback to adapter execution context and a final-invocation fence. - Confirm local child closure and complete remote exit receipts. Reject remote timeouts, missing exits, transport failures, and SSH exit 255 as stop proof. - Invoke collection once before workspace restoration in eight CLI adapters and at the confirmed ACP stop boundary. - Preserve the stop observation when a later log flush fails. - Run bridge and workspace cleanup in `finally` even when collection rejects. ACP records a safe error without exposing a raw filesystem path. Grok keeps collection errors separate from workspace restore failures and preserves completed provider results when both cleanup steps fail. - Correct the existing Cursor test shell fixture so bounded remote file reads run against real fixture files. ## Verification - Three stop-boundary regressions failed before the callback implementation and passed after it. - Independent prerequisite branch: 377 tests passed across 24 adapter, process-target, and ACP suites. Two added collector-rejection tests failed before the cleanup fix and passed after it. - A third regression reproduced Grok misclassifying a collection failure as failed workspace restoration. Two additional cases covered completed and failed provider turns when collection and restore both fail. The Grok and restore-classifier suites passed 48 tests. - All nine affected package typechecks and affected package builds passed; Grok checks passed again after its classification fix. - Integrated instruction branch: native local, legacy local, and native Daytona each passed three browser tasks with exact persisted bytes, fresh-task readback, history/restore, and explicit conflict resolution. Unchanged warm Daytona passed three turns. Legacy Codex passed all five checks again after the exception-safe cleanup fix. - Alternate staging passed the same three-task native Daytona flow: exact stopped-run save, independent downloaded readback, browser history/restore, and explicit resolution of a real concurrent edit. The deployed source was `14c3d810c9e05625121b3d27767aea9317b03125`, which covers the initial adapter callback. Later Grok cleanup failures are qualified by the adapter tests above. - The final combined native Daytona flow passed again on deployed `2bedd0f23bf4698b1f8b818f6796900647030427`: three fresh tasks proved ordinary instruction edits, independent readback, History/Restore, concurrent board conflict, and explicit candidate resolution. This native staging flow does not claim to exercise the Grok adapter. ## Risks - An unverified remote stop intentionally does not trigger collection. A later controller with verified stop evidence must recover it or report the copy unavailable. - The callback is optional. Callers that do not register it retain their existing behavior. - The callback runs before workspace restoration and can delay cleanup if its caller does not bound its own work. The dependent instruction collector uses bounded reads and retries. A rejected callback still permits bridge and workspace cleanup; it cannot claim an instruction save. ## Model Used OpenAI Codex, GPT-6, with tool use and code execution. The runtime does not expose the exact deployment variant or context-window size. Multiple Codex agents implemented and verified the change. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-28 08:45:53 -05:00
Devin FoleyandPaperclip	4b8ec588f3	Stop duplicating wake context in adapter environments (#13891) ... ## Thinking Path > - Paperclip manages agent work and preserves task context. > - Built-in adapters already include wake context in the agent prompt. > - They also copy the full wake JSON into a process environment variable. > - A large environment entry can prevent the agent from starting with `spawn E2BIG`. > - This change removes the duplicate environment entry and uses the existing prompt delivery. > - The agent keeps its context without extra file transport or new history limits. ## Linked Issues or Issue Description Refs #13144, #13860, #13872, #13793. Large wake payloads can exceed the operating system limit for one environment entry. The launch-envelope fix in #13793 handles the outer transport but leaves that child environment entry intact. Credit to @nickyleach for the prompt-only approach in #13144. This PR applies that part on current master. It does not include that PR's 30-item history limits or recovery-history endpoint. Those behavior changes can be reviewed separately from the process launch fix. ## What Changed - Stop exporting `PAPERCLIP_WAKE_PAYLOAD_JSON` in the shared ACP engine and all ten built-in adapter writers. - Ignore configured values of the retired variable so saved adapter settings cannot restore the oversized entry. Also drop inherited copies in Hermes, which builds its environment directly. - Keep scalar runtime variables, existing prompt rendering, continuation history, resume deltas, gateway bodies, and Hermes JSON template variables. - Document the prompt delivery contract and the migration for custom instructions that read the retired variable. - Test large local and sandbox child-process launches, fresh and resumed ACP turns, SDK delivery, and configured-variable filtering. ## Verification - `pnpm -r typecheck` passed. - Focused adapter utility, ACP, Codex child-process, and Cursor Cloud suites: 340 tests passed. - Hermes execution and prompt tests: 18 tests passed using its package Vitest configuration. - The child-process tests deliver over 128 KB of context through stdin and check the complete text. The ACP test retains 50 complete messages and 50 completed actions, then checks the resumed delta. - `pnpm build` passed. - `pnpm test:run` was attempted, then stopped after it reproduced ten macOS runtime-skill-cache permission failures (also reproduced on unchanged master) and one HTTPS backfill test failure. The HTTPS test passed when rerun unchanged on this branch and master. The complete local suite was not completed; Linux CI provides the full-suite gate. - CI is green on c3b8191f97: 53 checks passed and two skipped. Attempt 3 passed the remaining shards without source changes. Earlier attempts hit a lost runner, preview readiness, and chat browser failures. The preview test passed unchanged locally. Local chat tests passed 3/4; the remaining sidebar focus-style assertion also fails on unchanged master. No tests were weakened or skipped to obtain the passing rerun. - The staged diff passed `gitleaks stdin --redact` and `git diff --check`. ## Risks - Custom instructions or scripts that read `PAPERCLIP_WAKE_PAYLOAD_JSON` must use the wake payload in the prompt instead. The variable is absent even for small wakes. - This removes one cause of `E2BIG`. Legacy CLI paths for Gemini, Grok, Kimi, Pi, and Hermes still pass prompts as arguments and retain their existing argument-size limits. Other large environment variables also remain subject to OS limits. - No new context truncation, API route, database migration, authorization change, or production rollout is part of this PR. Existing prompt windows and resume rendering remain unchanged. ## Model Used OpenAI GPT-6 through Codex, with code execution and repository tools. The exact model variant and context window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-23 13:50:10 -07:00
DottaandPaperclip	d9b3a5653e	feat(chat): add initial Slack communication guidance and connection menus (#13760) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Chat connectors let people use the same tasks and agent tools from external conversations. > - Agents need communication guidance that fits the conversation medium. > - That guidance belongs in the original task context, without repeated instructions on each turn. > - Connection owners also need clear settings and a consistent way to remove a connection. > - This pull request adds initial Slack guidance, optional connection instructions, and chat connection menus. > - The benefit is clearer Slack replies with the existing Paperclip workflow and permissions. ## Linked Issues or Issue Description **What existing behavior does this improve?** Agent replies in Slack and chat connection management in the Apps catalog. **Current behavior** Slack tasks do not carry a saved communication profile. The catalog shows a separate Manage button and does not offer removal on every chat connection row. **Proposed behavior** Save Slack guidance when a new conversation creates a task. Restore that original guidance when a model session is rebuilt. Do not append it to ordinary follow-ups. Expose optional additional instructions in Slack Settings. Put Manage and Remove connection in a three-dot menu for all chat providers. Keep Finish setup visible for drafts. **Reason and benefit** Small answers fit in Slack. Substantial deliverables use ordinary document or artifact tools with a useful Slack summary. Connection settings apply to new tasks and cannot change permissions. Users can remove both active and unfinished chat connections from the catalog. **Breaking changes** Two additive database columns store endpoint preferences and the initial conversation snapshot. Existing endpoints default to empty preferences. Existing conversations keep their original behavior. Non-Slack guidance is unchanged. Related public context: https://github.com/paperclipai/paperclip/pull/13741 improves native chat recovery. This change adds communication context to those existing execution paths. A search found no duplicate communication-guidance PR. ## What Changed - Add a provider-guidance registry, enabled for Slack first. - Persist optional endpoint communication instructions and capture an immutable snapshot when a conversation creates a task. - Resolve guidance from the verified company-scoped connection. Restore it for fresh native and legacy sessions without per-turn reminders, extra model calls, or extra context queries. - Add the Slack Settings field, validation, audit coverage, and Storybook save/error states. - Add Manage and Remove connection menus for all seven chat providers. Keep the draft setup button. Require removal confirmation and allow retry after failure. - Add regression coverage, an active/draft menu story, and connector documentation. ## Verification All CI checks are green for 5f48df4e0. Greptile scored this head 5/5 with no actionable findings. No review threads remain unresolved. - Passed `pnpm -r typecheck` and `pnpm build` on PR head 5f48df4e0. - Passed design-token checks, UI typecheck, and all 20 catalog tests after rebase. Tests cover all seven providers, active/draft removal, confirmation, cache refresh, errors, and cancellation. - Verified the active/draft menu in Storybook. The interaction test runs without browser console errors. - Passed focused guidance, endpoint persistence/isolation, heartbeat trust, native context, ACPX, adapter utility, and CLI recovery tests. Full UI and CLI groups passed (6,512 and 502 tests). - Tested real Slack conversations on staging: concise updates with public links, a planning question with buttons, a saved plan, a saved report, task creation and assignment, and explicit detailed output. Old tasks retained original preferences after an edit; a new task used the changed preferences. Restored the staging setting afterward. - Existing safe progress remained visible without duplicate final replies or private reasoning. - Broad local tests found resource/time-sensitive failures that passed targeted reruns. One Cursor archive-download fixture failed on both this branch and the unchanged main checkout. The full local suite is not claimed clean. All PR-head CI test shards passed, including general, serialized, Runner, and browser suites. The redundant local full-suite rerun was stopped after CI completed successfully. - Live delegation was not tested because the staging company has only one agent. Live testing also found separate latency and runner task-editing capability gaps; this PR does not add connector-specific workflow behavior to hide them. ## Risks - Prompt guidance changes the form of new Slack replies. Explicit requests for detail still take precedence. - The additive migration is idempotent. Conversation snapshots remain fixed when connection settings change. - Native and legacy recovery must preserve the initial context without duplicates; targeted tests cover these paths. - Removing a connection stops new work through the existing lifecycle action. It retains Paperclip task history and does not delete the external app or bot. ## Model Used OpenAI GPT-6 through Codex, with repository editing, shell tools, and browser testing. The host does not expose a more specific model ID or context-window size. No separate model calls were added to the product. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass (targeted suites; broad local limitations are listed above) - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-21 14:14:25 -05:00
DottaandPaperclip	45c99a0d06	fix(adapters): default legacy harnesses and connected tools to full auto (#13693) ... ## Thinking Path > - Paperclip lets people manage AI agents and their work. > - Legacy adapters launch provider CLIs and expose connected tools. > - Existing defaults did not consistently grant full automatic permission. > - Remote Claude used a fixed tool list that omitted MCP tools and future tools. > - Direct Codex launches and OpenCode configuration also used narrower defaults. > - This change gives all these paths the same full-auto default as native runners. > - Explicit restrictive settings continue to work. ## Linked Issues or Issue Description Refs #13686. This PR is stacked on that native-runner and task-reassignment PR. Merge #13686 first. Related: #831 (constructed Claude agents), #1935 (adapter-switching permission defaults). ## What Changed - Use actual Claude permission bypass for local and remote runs and probes. Remove the fixed tool list so MCP and future provider tools are included. - Identify actual managed sandbox targets to Claude with `IS_SANDBOX=1`. Do not mark ordinary host execution as a sandbox. - Default direct Codex execution to approval and sandbox bypass, matching agent creation. Preserve explicit false, CLI profiles, sandbox modes, approval policy, and network restrictions. - Set OpenCode's full-auto runtime permission to `allow` for every tool and connection. Preserve the existing explicit opt-out. - Default Gemini probes to the same YOLO mode as execution. Make the legacy ACP `default` alias use `approve-all` for fresh and resumed sessions. - Add default, opt-out, remote, probe, connected-tool, and resume regression tests. Update adapter configuration documentation. - Other adapter paths already request full automatic permission or have no provider approval gate. ## Verification - Full workspace `pnpm -r typecheck` and `pnpm build` passed locally after rebasing onto current master. Targeted adapter/server and legacy ACP tests passed, including defaults, explicit opt-outs, remote launches, connected tools, and fresh/resumed sessions. - Greptile reviewed current head `8ca135eaffcf9cfdba6f1368e896a781a0891d50` at **5/5**. The security reviewer acknowledged the documented full-auto requirement. Acknowledged discussions are resolved. - Current head has **54 passing checks**. [PR checks](https://github.com/paperclipai/paperclip/pull/13693/checks). The process-adapter signoff browser shard passed on one retry after its first attempt exceeded a three-second issue-run wait. - **Six native Claude/Codex real-provider cases passed on their first attempt, with cleanup passing**, against the combined branch: plans, reassignment, and backlog creation/status. [Campaign and downloadable evidence](https://github.com/paperclipai/paperclip/actions/runs/35469926548). This does not claim a real-provider run of every legacy adapter. - The live-tested revision is `a37881c824dcd7170380fc4b788732fc743e5da7`. The current head differs only in the corrected heartbeat test expectation; application code is identical. - The campaign result-enforcement job passed. The separate report publisher failed during frozen dependency installation because the trusted workflow's patched-dependency configuration does not match its lockfile. Passing case evidence remains downloadable from the workflow. - Full-suite coverage comes from CI partitions. The separate unsharded local run was stopped after the corresponding CI partitions passed; it is not counted as a completed local run. ## Risks - Missing permission settings now grant all provider operations, including connected tools. OpenCode full-auto also overrides ambient provider permission rules. An explicit Paperclip permission opt-out preserves restrictive behavior. - Claude refuses full bypass as root outside an identified sandbox. Ordinary host deployments must run Claude as a non-root user. Managed sandbox launches include the required marker. - These defaults do not grant additional Paperclip roles, connections, or company access. Existing controller authorization and governance still apply. - This PR depends on #13686. Retarget it to master after that PR merges. ## Model Used OpenAI Codex, based on GPT-6, with code execution and repository tools. The exact deployment model ID and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-19 16:49:18 -05:00
3 people	02c7175e72	feat(agents): hired agents inherit provider credential references (#13268) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Agent adapters need provider credentials to start work > - A hired agent can lack the credential reference that its hiring agent already uses > - The child agent then cannot authenticate, even when the company has a valid credential > - This pull request copies matching credential references from the hiring agent to the hired agent > - The benefit is that hired agents can start with the provider access that the hiring agent already uses ## Linked Issues or Issue Description This change relates to [PR #9920](https://github.com/paperclipai/paperclip/pull/9920), which covers credential inheritance for other agent creation paths. This pull request covers hiring-specific inheritance and fixed Claude OAuth binding checks. ### What existing behavior does this improve? The agent hire route builds the child adapter configuration from the hire request only. ### Current behavior A hired agent does not receive matching provider credential references from its hiring agent. The child agent cannot run when the request omits the credential. ### Proposed behavior The hire route inherits matching credential references from the hiring agent. The request keeps priority. A Claude hire that supplies any Claude credential inherits none. ### Reason and benefit The child agent can use the provider access that the hiring agent already uses. The change copies references only and never copies raw token values. ### Breaking changes None. The change affects only hires that need an inherited reference. ## What Changed - Copy matching credential references from the hiring agent into the hired agent adapter configuration. - Preserve pinned versions, `required`, and `allowMissingOverride` fields on each copied reference. - Keep hire-request credentials ahead of inherited credentials. - Reject inherited fixed Claude OAuth bindings unless the parent agent passes company, adapter, and exact-binding checks inside the same transaction. - Add route and service tests for inheritance, precedence, and binding validation. ## Verification - `pnpm exec vitest run --project @paperclipai/server src/__tests__/agent-hire-auth-inheritance-routes.test.ts src/__tests__/agents-claude-oauth-binding.test.ts` — 60 passed. - `pnpm exec vitest run --project @paperclipai/server src/__tests__/agent-hire-idempotency-routes.test.ts src/__tests__/agents-service-secret-bindings.test.ts src/__tests__/secrets-service-user-secret-owner-scoped.test.ts` — 28 passed. - `tsc --noEmit` in `server/` — the error count matches the merge base, with no error in either changed source file. - `git diff --check` — clean. ## Risks Low risk. The route copies references, not raw tokens. The request keeps precedence. Company, adapter, and exact-binding checks protect the inherited Claude OAuth path. ## Model Used Codex, OpenAI GPT-5, with code execution and review support. The implementation commit predates this pull request handoff. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: nickyleach <331803+nickyleach@users.noreply.github.com> Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-14 09:26:27 -07:00
DottaandPaperclip	827ba8a434	fix: cancel stalled sandbox startup without waiting for setup (#13352) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Sandbox runs prepare credentials and files before an agent starts. > - Stop must work during that preparation. > - ACPX registered cancellation, but did not handle it while a setup command was waiting. > - Daytona cleanup waited for that same command before stopping the sandbox. > - This change stops the run's sandbox first and requires proof before abandoning setup. ## Linked Issues or Issue Description **What happened?** Stop left a sandbox run active when remote credential setup stalled. The run kept its connection lease until the sandbox was stopped separately. **Expected behavior** Stop terminates the selected run's sandbox, prevents later setup from launching the agent, and lets run cleanup finish. It must not report success without proof from the provider. **Steps to reproduce** 1. Start an ACPX agent in Daytona. 2. Hold a command during remote credential or file setup. 3. Select Stop before the agent starts. 4. Before this fix, cleanup waits for the held command and never reaches sandbox stop. Related: #13351 exposed this during connection acceptance testing. #12150 addresses scheduler load and session initialization limits, a separate startup problem. ## What Changed - Handle cancellation during ACPX sandbox preparation with a host-owned stop callback. - Pass an explicit active-work cancellation flag through environment cleanup. - Stop Daytona before draining setup commands. Keep normal graceful cleanup. - Require an exact run and lease termination receipt. Keep ownership of outstanding requests when stop cannot be verified. - Reject late setup work and defer sandbox resume until old requests settle. - Add regression tests and document the cancellation boundary. ## Verification - Red: both the stalled ACPX setup test and the Daytona cancellation test failed before the fix because Stop never reached the provider. - Green: adapter and Daytona suites passed, along with cancellation boundary and database-backed receipt/isolation tests. - Two real Daytona probes ran a five-minute setup command. Cancellation returned matching stopped receipts in 6.01 and 6.533 seconds. No later setup command ran. Both test sandboxes were deleted. - Repository typecheck and build passed locally. The full required CI suite passed, including all server/workspace tests, browser shards, Paperclip Runner verification, and canary packaging. The duplicate local full-suite run was interrupted after CI passed; it is not claimed as a completed local pass. - No UI changes. The live probe uses the actual adapter cancellation boundary and Daytona plugin; it is not a browser acceptance test. ## Risks - Provider stop failures remain unacknowledged. The adapter keeps ownership while its original requests remain active. - A retry can receive a settling-work error until old provider requests finish. - Cancelled sandboxes are stopped and retained under their existing provider expiry policy. - Local execution and cancellation after the agent turn starts keep their current behavior. - Other providers must return an exact termination receipt to permit early setup cancellation. No database migration. ## Model Used OpenAI GPT-6 through Codex, with code execution and tool use. The exact deployment identifier and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-13 08:35:43 -05:00
DottaandPaperclip	ab15aff390	feat: add experimental persistent agent chat (#13284) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Conversations must use the same tasks, controls, and execution history. > - Users need an ongoing chat with an agent without managing task properties. > - Agents should clarify and plan work, then hand execution to assigned project tasks. > - This pull request combines the reviewed Agent Chat stack for one squash merge. > - The benefit is persistent conversation with normal task governance and shared UI. ## Linked Issues or Issue Description **Subsystem affected** Task lifecycle, agent runtime tools, shared task UI, and browser/paid runner tests. **Problem or motivation** Users need one persistent conversation with each agent. A separate chat store or renderer would duplicate task behavior and bypass existing controls. **Proposed solution** Use a task-backed chat per company, user, and agent. Reuse the task composer and transcript. Clarify and plan in chat, then create assigned project tasks with the relevant plan. Keep Agent Chat behind its own disabled-by-default experimental setting. **Roadmap alignment** This implements the task-backed direction in [CEO Chat](https://github.com/paperclipai/paperclip/blob/master/ROADMAP.md#-ceo-chat). Related proposals: #2504 and #9693. Related request: #7981. The maintainer requested one squash merge of the complete stack. Consolidates the reviewed runtime [#13281](https://github.com/paperclipai/paperclip/pull/13281), backend [#13282](https://github.com/paperclipai/paperclip/pull/13282), and UI [#13283](https://github.com/paperclipai/paperclip/pull/13283) layers with this PR's E2E coverage. All four layers passed CI and received Greptile 5/5 before consolidation. This PR targets master and includes the complete feature. ## What Changed - Add personal canonical chat tasks with ordinary company visibility, immutable identity, idempotent first sends, and an idle waiting state. - Process `/new` in queue order. Preserve history, release a chat pause, and fence old provider context and delayed writes. - Keep chat lifecycle rules across recovery, finalization, assignment, task lists, and rollups. - Support research and plan revision in chat. Hand plans to ordinary assigned project tasks before execution starts. Reject new chat subtasks. - Add repository-aware project creation and discovery tools, including multiple repository IDs and GitHub URLs, authorization, idempotency, and durable project-created cards. - Reuse task UI components for chat, with starred/recent agent navigation and a separate `enableAgentChat` experimental flag. - Add deterministic browser tests and 24 paid chat cells across four Codex/Claude profiles, with validated reports and screenshots. - Integrate current master recovery, controller lease, queued-message, and task UI changes. Gate chat interruption and deferred promotion on ownership/feature policy. Guarantee lease renewal and active controls are stopped even if teardown fails. - Preserve master's migration 0273 and generate chat migration 0274 with idempotent replay for development databases. ## Verification - Prior exact heads of all four PRs passed Linux CI, including build, typecheck, general/serialized tests, and browser E2E. Each had Greptile 5/5 and no unresolved findings. - Integrated local verification passed: full repository typecheck and production build, Storybook build, token gates, 340 focused UI tests, all 20 deterministic chat browser tests, two migration replay tests, 88 focused chat/queue/native/controller tests, and provider/session regressions including real lease expiry. These include the three lifecycle regressions for the final admission/teardown fixes; server typecheck also passes. Current head `1268eda16cc2af892055917e7292f068820be135` has Greptile 5/5 with no unresolved findings and passing security scans. All final-head CI gates passed: build, full Runner verification, typecheck/release registry, canary, all general/serialized test shards, and all browser E2E shards ([CI run](https://github.com/paperclipai/paperclip/actions/runs/34696739927)). Local PostgreSQL startup contention required serialized retries; skipped fixtures do not count as passing coverage. - The earlier paid campaign passed all 24 chat cells and retained 32 screenshots: [report](https://d1p6rlowie26tp.cloudfront.net/runner-e2e/campaigns/gha-34648511170-1/index.html?report=agent-chat#suite-agent-chat). It tested `abacbdfd2f660709ec37312cdb758284c8399d04`; it is prior evidence, not a paid run of this integrated head. - Manual check: enable Agent Chat in Experimental settings, open an agent, clarify and revise a plan, then hand off to an assigned project task. Stop a reply, send `/new`, and verify fresh context with retained history. Disable the setting and verify agent shortcuts/new chat turns are blocked. ## Risks - Queue/session integration can affect retries and delayed writes. Tests cover ownership, cancellation, reset boundaries, idle recovery, and ordinary task behavior. - Migration 0274 adds conversation fields and constraints. Replay is idempotent and preserves existing development chat history. - This combines the previously reviewed stack at the maintainer's request. Agent Chat remains off by default and is separate from Conference Room. ## Model Used OpenAI Codex, GPT-6 Astra (`gpt-6-astra`), with reasoning, code execution, browser tools, and parallel review. The exact context-window size is not exposed in this session. Codex and Claude also ran as test subjects in the linked paid campaign. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-12 08:56:04 -05:00
DottaandPaperclip	9031516a7e	fix: recover legacy Daytona startup failures from task and inbox (#13272) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Legacy conversation adapters can run in Daytona sandboxes. > - A server restart during provisioning can occur before the invocation event exists. > - Recovery then lacks the old adapter identity and leaves a hold that ordinary user retries cannot clear. > - A remote launch can also fail when its host relay looks for Node in the sandbox PATH. > - This pull request records the adapter at claim time and restores explicit user continuation after verified cleanup. > - Users can recover from the task or inbox while the failed run and uncertain action history remain intact. ## Linked Issues or Issue Description Refs #13237, #13239, #13254. Those changes cover recorded conversation runs, native user continuation, and explicit remote Stop. This change covers legacy failure before `adapter.invoke` and exact task/inbox Retry. Refs #9771 for overlapping generated-command quoting. This change also supplies the absolute host Node executable. Refs #13163 and #13264 for the separate native restart and retained-workspace work. **What happened?** A legacy Daytona run interrupted during provisioning became `process_lost` without an invocation event. Recovery preserved an execution hold, and Retry or a new task reply could not resume it. Cleanup could also run before the Daytona plugin was ready. On a macOS host, a subsequent ACP relay launch failed with `env: node: No such file or directory` because the remote launch environment did not contain the host Node path. **Expected behavior** An interrupted conversation can continue after its previous execution stops. Explicit Retry and new user replies should start a fresh turn with the task history. Cleanup failures must remain visible and recoverable. The host relay must use the host Node executable. **Steps to reproduce** 1. Use a legacy Claude adapter with a Daytona environment. 2. Interrupt the server after it acquires the sandbox lease and before it records `adapter.invoke`. 3. Restart and inspect the task hold. 4. Retry from the task or inbox, or send a new task reply. 5. Confirm the old sandbox has stopped and one new response arrives. **Paperclip version or commit** Reproduced from master at `3bafac12f796fbea02e609e1074a9639f872e9c4`. The branch is rebased on `51b0e01ea`, including #13261 and #13270. **Deployment mode** Built from source on macOS with a real Daytona sandbox and the legacy Claude ACP adapter. ## What Changed - Count new browser specs with the scheduler's median duration in the shard-balance check. This fixes a false policy failure after new specs arrive from both branches. The balance threshold is unchanged. - Persist server-owned adapter identity in the queued-to-running claim before provisioning starts. - Wait for provider plugin startup before restart cleanup. Keep failed cleanup leases as active ownership blockers. - Admit exact board retries and new user comments after verified termination. Retain the old run, task history, approvals, and unknown action outcomes. - Adopt repeated Retry requests. Permit one scoped cleanup attempt per explicit user Retry after the automatic limit, with an activity record. A later user Retry can recover after a transient provider failure; automatic attempts remain capped. - Resume replies deferred during cleanup, including historical legacy startup failures. - Launch the host ACP relay through the absolute host Node executable. - Add a task-level Retry button and return actionable blockers when retry admission is refused. - Add database regressions and three browser recovery journeys. Exclude installed third-party dependency skills from the shipped-skill audit. ## Verification - Current head: `d23c84181`, rebased on `51b0e01ea`. Conflict resolution retains the saved-message recovery, local stop receipts, and wait reasons from #13270 alongside exact legacy Retry support. - Real Daytona: interrupted the server after lease acquisition and before adapter invocation. Restart cleanup confirmed provider termination. Task Retry cleared a seeded historical hold and a real Claude agent returned `Recovery verified.` in the task. Removed the disposable sandbox and environment after testing. - All three browser recovery journeys passed again after the final rebase. Task Retry, Inbox Retry, and a new reply each produced one fresh successor, completed the task, preserved the failed run, and retained the answer after reload. - All 29 e2e/server shard-partition tests passed. The balance check now uses the scheduler's median fallback for unmeasured specs, with the same balance threshold. - Server typecheck passed after rebuilding the generated runner dependencies. The combined recovery/route run passed 136 of 137 tests. Its remaining route test timed out during the first cold module import at its explicit 10-second limit; an isolated rerun reproduced that timeout and passed the other 51 route cases. The complete CI suite passed on this head. The same route file passed all 52 cases in CI, including the first cold import in 7.5 seconds. - Before the final rebase, recursive typecheck, full build, UI token gates, 132 targeted server tests, and the complete [CI workflow](https://github.com/paperclipai/paperclip/actions/runs/34650004085) passed. The subsequent CI failure was the shard-balance accounting mismatch fixed here. - Greptile reviewed `d23c84181` at 5/5 with no outstanding actionable findings. The complete [current CI workflow](https://github.com/paperclipai/paperclip/actions/runs/34653327949) passed on attempt 2. All test, typecheck, build, and canary jobs passed on the first attempt. Docker setup timed out fetching BuildKit from Docker Hub; retrying that job and its dependent aggregate succeeded. ## Risks - Recovery admission changes executable authority. Company, task, agent, user, approvals, process ownership, and provider termination checks remain required. - Explicit continuation starts a fresh conversation with history. It does not certify unknown external action outcomes or rerun non-conversation adapters automatically. - Changing task status alone does not clear an execution hold. The task now offers an explicit Retry action. - Historical adapter claims and invocation events take precedence over current agent settings. Known process or webhook runs retain their hold. Pre-upgrade rows with no adapter evidence may receive only a new explicit user turn after termination proof; they do not become eligible for automatic replay. - No schema migration or sandbox-image change is required. This branch has not been deployed to production. ## Model Used OpenAI GPT-6 through Codex, with repository inspection, code execution, browser automation, and test execution. The exact deployment model ID and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [ ] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-11 18:08:14 -05:00
Nicky LeachandPaperclip	ad4f0b5867	Fix Codex API key authentication in tests and runs (#13260) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Agent runtime settings can bind organization secrets to an adapter environment > - Paperclip redacts plain environment values when it returns a saved agent to the UI > - A saved-agent test sent the redacted `CODEX_HOME` value back to the server > - Codex ACP also received the API key without an ACP API-key authentication request > - This pull request restores saved environment values for tests and selects API-key authentication for Codex ACP runs > - The benefit is that Codex agents can test and run with an organization-scoped OpenAI API key ## Linked Issues or Issue Description **What happened?** Testing a saved Codex agent sent `***REDACTED***` as `CODEX_HOME`. Secret normalization rejected that placeholder. Remote Codex ACP runs received `OPENAI_API_KEY`, but session creation stopped with `Authentication required`. **Expected behavior** Paperclip must use the saved `CODEX_HOME` value when it tests an existing agent. Codex ACP must select API-key authentication when `OPENAI_API_KEY` is available. **Steps to reproduce** 1. Create an organization-scoped secret named `OPENAI_API_KEY`. 2. Give a Codex agent access to the secret. 3. Save the agent runtime settings. 4. Test the saved agent again. 5. Run the agent in a remote sandbox through ACP. **Paperclip version or commit** Reproduced on master before commit `68c17709d7c051a804a416263e2e08920f1dfcb1`. **Deployment mode** Self-hosted server with a remote sandbox environment. **Installation method** Built from source. **Agent adapter(s) involved** Codex. ## What Changed - Send the saved agent ID with adapter environment tests. - Restore redacted plain environment values from the saved agent before test-time secret resolution. - Select the Codex ACP `api-key` authentication method when `OPENAI_API_KEY` is present. - Add focused regression coverage for saved-agent tests and remote ACP launch configuration. ## Verification - `pnpm --filter @paperclipai/adapter-utils exec vitest run src/acpx-engine/execute.test.ts` - `pnpm --filter @paperclipai/server exec vitest run src/__tests__/agent-adapter-validation-routes.test.ts` - `pnpm --filter @paperclipai/ui exec vitest run src/lib/test-agent-setup.test.ts` - `pnpm -r typecheck` - `pnpm test:run` - `pnpm build` - `git diff --check` ## Risks - Low risk. The test route reads saved configuration only when the request supplies a compatible agent ID and the caller can update that agent. - The Codex ACP change applies only when `OPENAI_API_KEY` exists and no explicit `DEFAULT_AUTH_REQUEST` exists. - There are no schema migrations or telemetry changes. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex with `gpt-5`. The context-window size is not exposed in this runtime. The model used reasoning, repository search, file editing, command execution, and test execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-11 13:58:29 -07:00
Nicky LeachandPaperclip	87b3e5fc61	fix(adapter-utils): stage selected skills into the sandbox for a remote Claude ACP run (#13196) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - A user selects skills for an agent, and the host materializes those skills into a bundle the agent reads > - An agent can run in a remote sandbox, where the host must stage every file the agent needs > - On the Agent Client Protocol lane the host built that bundle and then named its host path in the prompt, but it never staged the bundle into the sandbox > - The agent therefore read a path that does not exist inside the sandbox, and the run failed on the missing skill file > - The command-line lane of the same adapter already stages a `skills` asset and reads the in-sandbox directory back from the staged runtime > - This pull request carries that proven pattern to the Agent Client Protocol lane, so a selected skill reaches the agent in a remote run ## Linked Issues or Issue Description No public issue exists for this change. The description follows. **What happened?** A remote run of the Claude adapter on the Agent Client Protocol lane could not read any selected skill. The host builds the skill bundle in its own state directory, then writes that host path into the prompt as `Skill root: <path>`. The remote seam of that lane staged one asset only, the configuration seed. It staged no skills asset, so no skill file crossed into the sandbox. The agent then tried to read the skill file at the host path, and the read failed with a missing-file error. **Expected behavior** A remote run receives the skills the user selected, and the prompt names the directory that holds those skills inside the sandbox. **Steps to reproduce** 1. Select one or more skills for an agent that uses the Claude adapter. 2. Start a run for that agent in a remote sandbox on the Agent Client Protocol lane. 3. Ask the agent to read the skill file at the path the prompt names. The file is not there. **Agent adapter(s) involved** The Claude local adapter, on its Agent Client Protocol lane. The shared engine in `packages/adapter-utils` carries the prompt rewrite. **Additional context** The command-line lane of the same adapter already stages a `skills` asset and remaps onto the staged directory. This change reuses that mechanism instead of adding a new transport. One other adapter shows the same host-path shape on its own Agent Client Protocol lane. That lane is tracked separately and this pull request does not change it. ## What Changed - Return the host skill bundle directory from the Claude skill runtime step, and carry it through the remote managed-home context to the staging seam. The value is null for a non-Claude agent, for a run that selects no skill, and for a run whose selected skills all fail to materialize. - Stage that bundle as a `skills` asset on the Claude Agent Client Protocol remote seam, and only when the run selected a skill. - **Stage that asset with `followSymlinks: false`.** The bundle holds an owned copy of each selected skill, and the copy step never copies a symbolic link at the root or at any depth. So the bundle contains no symbolic link, and staging has none to follow. Refusing to follow one also stops a link planted in the bundle directory after the copy from pulling an unrelated host file into the sandbox. A regression test walks the real adapter sources and pins the reviewed `followSymlinks` value at every skills staging site, so a new or changed site fails the test. - **Drop a skill whose staged copy has no usable `SKILL.md`** from the prompt, the skill identity, the command notes, and the bundle, and log which skill was dropped and why. Without this, a skill whose copy failed, or whose `SKILL.md` is a symbolic link the copy step skips, stayed advertised in the prompt while its file was absent — the same missing-file symptom this change exists to fix. - Rewrite the `Skill root:` prompt line, the skill identity, and the command notes onto the in-sandbox directory. The rewrite runs in the engine, after the workspace placement returns the staged runtime. A compatible session resume reuses the cached staged runtime, so the rewrite runs on that path too. - Keep the session fingerprint on the host-independent skill identity. A change to the selected skill set still invalidates a warm session, and the volatile sandbox path stays out of the hash. - A local run, and a run with no selected skill, keep their current behaviour. ## Verification - `pnpm exec vitest run --project @paperclipai/adapter-claude-local src/server/acp.test.ts` — 28 of 28 pass. - `pnpm exec vitest run --project @paperclipai/adapter-utils src/acpx-engine/execute.test.ts src/skills-staging-follow-symlinks.test.ts` — the new engine tests and the staging-site tests pass. - `pnpm --filter @paperclipai/adapter-utils exec tsc --noEmit`, and the same check on the adapter package — both exit 0. - The end-to-end test drives the lane against a local sandbox stand-in. It reads the skill root out of the prompt the runtime received, and then opens the skill file at that path. That is the reported symptom, proved closed. - The new tests carry a sensitivity control. Restoring only the production files to their previous content fails 7 of the 9 new tests. The other 2 do not depend on production code: one is a parser unit test for the source scanner. ## Risks Low risk, and the change is a two-way door. A revert restores the previous behaviour exactly. - **Scope.** The change touches one adapter lane. It does not change the local lane, and it does not change any other adapter. No existing staging site changes its `followSymlinks` value. - **The staged bundle and the workspace.** The staged skills land under the runtime directory inside the workspace. The workspace restore excludes that whole runtime directory, so the staged skills never return to the host worktree. A test proves the exclusion end to end. - **Session reuse.** The rewritten path never enters the session fingerprint, so it cannot invalidate a warm session, and a compatible resume applies the same staged path. - **Direction of data.** Files move from the host into the sandbox only. The change adds no path that writes sandbox content onto the host. - **A dropped skill.** A skill with no usable `SKILL.md` is now absent from the prompt instead of named but unreadable. The run logs the skill and the reason, so the cause is visible. ## Model Used Claude Opus 5 (`claude-opus-5`), with extended thinking and tool use, through Paperclip agents. ## Test plan - [x] `pnpm exec vitest run --project @paperclipai/adapter-claude-local src/server/acp.test.ts` passes — 28 tests. - [x] `pnpm exec vitest run --project @paperclipai/adapter-utils src/acpx-engine/execute.test.ts src/skills-staging-follow-symlinks.test.ts` passes. - [x] `pnpm --filter @paperclipai/adapter-utils exec tsc --noEmit` exits 0. - [x] All continuous-integration gates are green. - [x] The automated review reports no open finding against the current head. ## Required Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used with version and capability details - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have described the issue in-PR following the relevant bug report template - [x] I have not referenced internal or instance-local Paperclip issues or links - [x] My branch name describes the change and contains no internal Paperclip ticket id - [x] I have run the targeted tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect this change - [x] I have considered and documented the risks above - [x] All continuous-integration gates are green - [x] The automated review score is 5/5 with no open current-head findings - [x] I have addressed every reviewer comment that applies to the current head **Note on the branch history.** This branch first carried a different change: a filename-based admission filter that refused to stage files such as `.env` from a skill directory, together with a switch from symbolic-link bundles to copied bundles. That approach was rejected and **reverted** on this branch. It does not match the documented trust boundary, because the host already delivers credentials into the sandbox on purpose, and replacing the symbolic-link bundles broke live editing of a skill. The revert is in this branch's history. The file that work changed, `packages/adapter-utils/src/server-utils.ts`, is byte-for-byte identical to `master` here and is not part of this diff. Earlier review findings that name that file target the reverted code. All of them are resolved, and the automated review passes on the current head. --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-11 07:50:06 -07:00
Nicky LeachandPaperclip	d1ba17eeca	fix(adapter-utils): fail fast when the sandbox control channel is lost mid-turn (#13158) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Adapter utilities run agent turns and report their results to the control plane > - A lost sandbox control channel can leave an agent turn without a result > - The host then waits for the full adapter timeout instead of reporting the loss > - This pull request adds a push loss signal and a bounded host wait > - The benefit is a prompt failure terminal when the agent stops answering ## Linked Issues or Issue Description **What happened?** A sandbox control channel loss during an Agent Client Protocol turn left the host waiting for the four-hour adapter execution timeout. **Expected behavior** The host should detect the terminal channel loss, stop the turn, and report a safe failure without waiting for the agent. **Steps to reproduce** 1. Start an Agent Client Protocol turn through a sandbox adapter. 2. Close the duplex control channel while the turn remains active. 3. Observe the host response before the adapter timeout expires. **Paperclip version or commit** Test the pull request commit set at `10b6bbc5525a79fd575298607dd5a25ae448fc8a`. **Deployment mode** The change applies to sandbox-backed adapter execution. ## What Changed - Add `onLoss(listener)` to the duplex bridge handle. - Register the loss listener at turn start and read losses latched before turn start. - Cancel the turn on loss and arm a 30-second host deadline. - Close the stream locally when the deadline wins and create a host terminal. - Derive the public error from the closed `DuplexLossReason` enum. - Add tests for loss order, cancellation, timeout, and safe error output. ## Verification - Run `pnpm --filter @paperclipai/adapter-utils exec tsc --noEmit`. - Run `pnpm --filter @paperclipai/adapter-utils exec vitest run src/acpx-engine/execute.test.ts -t "run-disposition seam"`. - Confirm that the full pull request workflow passes. ## Risks The new deadline changes a lost-channel path from a long wait to a host-built failure after 30 seconds. Orderly completion keeps its existing behavior. The deadline race against a pending `turn.result` has no direct test. ## Model Used OpenAI Codex, GPT-5, with tool use and code execution. The runtime does not expose a more specific deployment version or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-10 15:37:05 -07:00
DottaandPaperclip	889947c238	feat: add experimental native chat connectors (#13038) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - People also ask agents for work in their existing chat tools. > - Each external conversation needs one task and a current authorized source. > - Retries, Stop, and provider failures must not duplicate work or expose private data. > - The first chat PR establishes the opt-in provider and data contracts. > - This PR adds experimental channel integration and its durable control plane. > - Users can request work from connected channels and inspect delivery in Paperclip. ## Linked Issues or Issue Description Refs #13100 and #13092. This is the second of exactly two chat PRs. Foundation #13100 is merged and changed 143 files. Runner prerequisite #13092 is also merged. This PR changes 400 files against master, below the 500-file review limit. It contains no wireframe images or HTML galleries. ## What Changed - Add native Slack, GitHub, Microsoft Teams, Telegram, and Discord chat connections. Keep chat disabled unless the operator enables experimental chat connectors. Preserve the production GitHub tool connection and its normal setup path. - Bind each provider bot identity to one immutable Paperclip agent. Bind each admitted external conversation to one task. Paperclip owns tasks, runs, permissions, and audit records. - Add durable admission, per-conversation queues, questions, task controls, progress, final replies, images, files, and delivery receipts. Board comments remain internal unless explicitly sent to the channel. - Check current identity, provider reach, resource access, credentials, runtime generation, and exact source before provider effects. Keep private responses private. Never send raw reasoning, private logs, credentials, or tool arguments. - Hold uncertain sends for explicit audited resolution. Make Board Send-to-channel atomic and idempotent. Keep reconnect and setup credentials in Paperclip secret storage. - Preserve current native-runner authority across retries, lost acknowledgements, and recovery. Keep immutable input and completion contracts separate from newer user input. Receipt reconciliation cannot launch a provider. - Reconcile chat close/new ordering and provider-effect lock order. Audit resource access changes in the same transaction. Submit only the selected resource from each UI toggle so stale pages cannot undo unrelated access changes. - Drain Codex stdout before certifying process exit. Bound the drain with the existing shutdown grace. Preserve observed terminal authority without treating an undrained process as successful or reusable. - Incorporate master `018ca5da` with its ACP Stop, mobile task layout, runner packaging, and official lock changes. Preserve dedicated chat-answer continuations in both directions when ordinary queued comments are adopted after Stop. - Fence late adapter readiness behind an earlier Stop for the same run. Preserve verified cleanup for registered adapters. Handle single Stop, agent pause, duplicate Stops, and failure release without creating a false cancellation receipt. - Incorporate master's `6dd48cad4` wake-queue extraction. Preserve exact failed-chat retry authorization and lineage, retired question-source suppression, and the block on generic recovery that would discard the admitted source. Fresh deferred input retains its separate promotion path. - Incorporate master `2a05b5ed3` and its queue-admission extraction, simplified transaction ports, and separate runner CI job. Preserve exact durable receipts, actor separation, and dedicated-answer isolation through the new module. A failed receipt insert rolls back the accompanying deferred-wake merge. ## Verification Current head: `afe19299d06253cb628eb398e91d1200ea9f412a`, incorporating master `2a05b5ed3457ea33efd6895520447d1d97fe98d8`. The conflicts are resolved. This successor fixes two test-harness boundaries exposed by CI: per-case route-module preparation and actual durable-save completion before intentional runner termination. Production code and all existing test/turn deadlines are unchanged. [Exact-head Greptile review](https://github.com/paperclipai/paperclip/pull/13038#issuecomment-5587250594) is **5/5**, completed September 10 at 13:20:55 UTC, with no actionable findings or open review threads. [Fresh exact-head CI](https://github.com/paperclipai/paperclip/actions/runs/34481724341) passes **all 24 jobs**, including Build and both required aggregates. Normal exact-head guarded merge was attempted and rejected by the remaining branch approval policy: CODEOWNER review is required and no human approval is present. Normal **squash auto-merge is enabled** as of September 10 at 13:36:26 UTC. Requested CODEOWNERS have been notified; no approval bypass or self-approval was used. Earlier-head results below remain historical evidence, not qualification of this successor. - Final exact-head Linux evidence: 995/995 chat integration cases; 36/36 agent-skills routes; 35/35 runner live-session cases, including real process kill/resume; 1948 runner Vitest cases with three existing benchmark/platform guards; 870/870 API-authority cases; and 104 browser cases with four existing optional skips. Rust, conformance/replay, full repository build, typecheck, canary, all server/workspace shards, and both required aggregates pass with normal CI concurrency. Earlier failed attempts remain recorded below. - Latest test-only qualification: 141/141 route/permissions/authentication cases pass in separate cold forks, with plain server types and independent review clear. The real-runner suite passes 35/35, with plain runner types and independent review clear. A controlled premature-save acknowledgement fails as expected; matching ownership/effect/process evidence, rejected saves, real turn outcome, test abort, and pre-kill liveness are covered. No local reproduction of the original CI scheduling failure is claimed. The preceding [CI run](https://github.com/paperclipai/paperclip/actions/runs/34479680858) passes 21/24 jobs, including all 995 Linux chat cases and browser aggregate (104 passed, four existing optional skips); only Build, the skills serialized shard, and the required verification aggregate fail. Its exact-head Greptile review was 5/5. Both failed job logs are retained. - Final fixture qualification: all eight focused Discord cases and all 995 chat integration cases pass. The exact modal statement/PID is observed before taking the real connection lock; the test then proves its actual blocking relationship before mutation. Original SQL execution, provider behavior, negative assertions, and 1s/15s timeouts remain unchanged. Independent review is clear and test/production hashes remain frozen. The preceding [CI attempt](https://github.com/paperclipai/paperclip/actions/runs/34477184777) passed 22 jobs, including Build/runner, typecheck, canary, all other test shards, and browser aggregate (104 passed, four existing optional skips); the two fixture failures and failed verification aggregate remain recorded, not relabeled as a pass. - Current queue-module composition: 308/308 recovery/batching/queue/Stop tests; 995/995 full chat integration; 89/89 module tests, including real PostgreSQL receipt-insert rollback; 24/24 workflow/module-boundary tests; plain server and UI types. All four actual local process/ACP browser paths pass in 1.4 minutes. Fresh databases, no skips or retries, stable reviewed source hashes. The initial boundary failure is retained; its no-op service wrapper was removed without changing recovery context or weakening the check. An exploratory standalone test-directory typecheck fails because its new upstream transformation config is not a standalone typechecking project; standard CI/build does not invoke it, and no configuration was weakened to suppress those diagnostics. - The preceding head `e02a63d462ce5d47433b0aeb632bb6fd20aab1ba` passed [all 24 CI jobs](https://github.com/paperclipai/paperclip/actions/runs/34436462958) and exact-head Greptile review at 5/5. Required CODEOWNER review prevented its normal merge before master advanced again. - Final extracted-module composition: 307/307 recovery, batching, queue and Stop-control tests; 995/995 full chat integration; 49/49 module tests including eight PostgreSQL adapter cases; and 19/19 issue-update tests. Plain server types pass. All four actual local process/ACP browser paths pass in 1.3 minutes. Fresh databases, no skips or retries in these cohorts, frozen source hashes, and independent review clear. - The preceding head `3e4e1c1c` passes [all PR CI jobs](https://github.com/paperclipai/paperclip/actions/runs/34415826820), including Build and required `ci / verify` and `ci / e2e`. Both the original Rust failure and the previously load-sensitive lineage fixture pass with unchanged Linux concurrency. Master advanced afterward and required this reconciliation. - Final master composition: 448/448 focused UI tests, 186/186 adapter tests, 24/24 queue/control tests, and 11/11 packaging tests. Plain UI, server, shared, and adapter types pass. Token gates and diff checks pass. Independent server and UI reviews are clear. - Stop-registration regression: both real-service cases fail against exact `a95` source and pass with the fix. The full corrected recovery/control suite passes 265/265. Duplicate-owner and failed-Stop controls also pass. Plain server types pass. The readiness barrier prevents provider startup without adding an acknowledgment to an already terminal run. - Final qualification strengthens terminal-field equality and repeats both affected cases successfully on a fresh database. All four actual local process/ACP browser paths pass again in 1.3 minutes, without skips or retries. The final screenshot shows Cancelled, a paused subtree, retained input, and no error toast. - Two new actual-service regressions fail before the merge fix. They prove that queued-comment adoption could consume a dedicated chat answer or add unrelated input to that answer. The fixed four-case cohort passes, including ordinary upstream continuation and adapter Stop controls. Full recovery passes 257/257. All four actual local process/ACP Stop browser flows pass in 1.4 minutes, without skips or retries, on a fresh database. - The unchanged runner artifact was qualified with 171/171 transport tests, 870/870 API-authority tests, conformance 1/1, and replay 11/11. Six controlled reader tests prove the exit/drain repair. Its local serial Rust workspace passed 546 top-level cases plus two invoked helpers; the later passing Linux CI supplies default-concurrency evidence. - Prior exact-source full chat integration passes 995/995. Settings regressions cover concurrent stale pages, 501 destinations, pending state, rejected updates, and explicit retry. These deterministic tests do not prove live provider behavior. - Retained failed attempts and their causes are in the [qualification log](https://github.com/paperclipai/paperclip/blob/afe19299d06253cb628eb398e91d1200ea9f412a/doc/plans/chat-adapters/2026-09-08-chat-queue-and-webhook-repair.md). The first merge adapter run timed out while macOS slept for 290 seconds. Its unchanged repeat passed with a temporary sleep guard. No assertion, deadline, or CI gate was weakened. Review commands include `pnpm --filter @paperclipai/server exec vitest run src/__tests__/heartbeat-process-recovery.test.ts src/__tests__/issue-queued-comments-routes.test.ts` and `pnpm exec playwright test --config tests/e2e/playwright.config.ts tests/e2e/acp-stop-continuation.spec.ts`. Database suites require fresh disposable databases. See the [browser runbook](https://github.com/paperclipai/paperclip/blob/afe19299d06253cb628eb398e91d1200ea9f412a/doc/plans/chat-adapters/2026-09-04-chat-adapters-browser-e2e-runbook.md) for provider setup and separate live acceptance steps. ## Risks - This remains experimental. Deterministic tests and bounded live evidence do not establish every provider feature, tenant, permission layout, or media shape. Teams work-tenant qualification is still open. - Failed and uncertain provider effects remain visible and can require operator action. A transport receipt does not prove recipient visibility. - Native controller and runner artifacts must remain compatible. Preserve lease ownership, terminal authority, source binding, and quarantine during future changes. - Access and audit rows commit together, but activity notifications remain best-effort. This is not a new durable event outbox. - The PR operation does not deploy a live server, replace its runner, or change provider permissions. Remaining live qualification is documented in the [temporary handoff](https://github.com/paperclipai/paperclip/blob/afe19299d06253cb628eb398e91d1200ea9f412a/doc/plans/chat-adapters/2026-09-08-open-qualification-followups.md). ## Model Used OpenAI Codex assisted with implementation, tool execution, testing, and review. The work records `gpt-6-astra` assistance. The environment does not report a context-window size. No private reasoning traces are included. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-10 10:06:45 -05:00
DottaandPaperclip	018ca5daaf	fix: verify ACP Stop and preserve safe continuation (#13119) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Task controls coordinate provider execution and queued user messages. > - Stop could finish before an embedded ACP provider stopped its tools. > - A later request could be held for reconciliation without a clear task response. > - A restored provider could also retain the stopped run's API credential. > - This pull request verifies provider termination and preserves safe session continuation. > - Operators can continue known-safe work and see why uncertain work cannot start. ## Linked Issues or Issue Description **What happened?** Stop could leave an embedded ACP provider running. A queued follow-up followed by “go” could fail before it reached the provider. Task chat could show a generic missing-response message. Even a restored session could use the previous run's credential and fail its task update. **Expected behavior** Stop waits for confirmed provider termination. A later explicit wake continues the same compatible session only when recorded actions have known outcomes. It carries pending comments and the current run's environment. Uncertain actions retain a visible reconciliation hold. Composer Stop preserves the existing pause rule: conversation can continue while paused, but task work requires Resume. **Steps to reproduce** 1. Start an embedded ACP task. 2. Send a second request while the provider is running. 3. Interrupt the run, then send “go”. Also test composer Stop followed by Resume work. 4. Check that the request is delivered once and that the provider can complete the task through the current run's API credential. 5. Repeat with an unfinished write. Confirm that the write stops and that further execution stays blocked with a visible reason. **Paperclip version or commit** Built from source on master at `3bc60dd8b` plus this branch. **Deployment mode** Local source build with an isolated embedded PostgreSQL instance. Refs #11183. Refs #12552. Those changes address recovery after operator cancellation. This change also covers embedded ACP termination, session proof, pending-comment delivery, and task feedback. ## What Changed - Propagate Stop into embedded ACP and wait for bounded adapter cleanup and provider exit. Retain the actual ChildProcess object for forced termination on all platforms; never signal a recycled numeric PID. - Preserve interrupted checkpoints only for acknowledged, local, persistent sessions with settled reads or no tools. Keep writes, incomplete actions, and forced termination blocked. - Restore the same compatible provider session with the current run's environment. Reject fresh-session fallback for an interrupted checkpoint. - Adopt pending comments on the next explicit wake. Stop alone does not dispatch them. - Share the execution-blocker rule across dispatch, Resume, and task detail. Show Stopped or Couldn't start with the recorded reason. Resolve the stopped agent for the run link, including reviewer runs. - Keep execution reconciliation holds intact when generic recovery sees queued comments or healthy child tasks. - Add process, service, component, and browser regression coverage. Fix disposable database cleanup and React test settling exposed by the full suite. ## Verification - Passed `pnpm -r typecheck`, `pnpm build`, and `pnpm check:token-gates`. - Passed all three `acp-stop-continuation.spec.ts` browser journeys. They use an actual ACP child process and require task completion through the agent API. - Passed 165 adapter execution, operator-stop, and child-process control tests, 17 queued-comment route tests, and 65 tests in the two adjusted UI suites. Earlier focused recovery, heartbeat, and task-control tests also passed. - Manually used the browser to queue a request, Stop, send “go” while paused, and Resume. The same session answered once and moved the task to Done with the current run's credential. - Manually interrupted an unfinished write. Its file size stayed fixed for five seconds. “Go” showed the reconciliation reason and did not start another provider prompt. - Separate live Claude ACP smoke checks confirmed that Stop ended a disposable local write and that a no-tool interruption could resume the exact provider session. The browser fixture does not call Drive or another external app. - Passed all 5,615 UI tests and 3,090 other workspace tests. The CLI and general server groups pass with targeted retries: two transient server failures passed together on retry, and two embedded-database startup failures passed after removing abandoned shared-memory segments from this task's completed browser fixtures. All 144 serialized server suites completed, with 2,189 tests passing after two transient HTTP socket failures passed on retry. - Passed all 135 heartbeat process/recovery tests, including a deterministic regression that failed before the recovery-sweep fix. - Passed 18 dispatch integration tests, including stopped-reviewer links, company boundaries, and malformed run IDs. - Greptile is 5/5 on `7dd170d83`, with zero unresolved review threads. The security scan and all required CI gates pass for the same commit. ## Risks - Safe continuation depends on complete tool reporting and a restorable local provider session. Unknown outcomes remain blocked and require reconciliation. - Provider cleanup can take time. A timeout does not grant replay permission. - The change adds optional adapter context fields and an optional issue projection. It does not change the database schema or require a migration. - Test cleanup truncates company data only in a disposable test database. ## Model Used OpenAI GPT-6, running as Codex with repository tools, code execution, and browser interaction. The runtime does not expose a more specific model deployment ID or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-09-09 22:06:06 -05:00
DottaandPaperclip	cabc9146d0	feat(apps): add secure remote MCP and PostHog setup (#12339) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Apps give those agents governed access to external tools. > - Remote MCP setup needs secure endpoint validation and durable credentials. > - PostHog needs both browser sign-in and personal API key setup paths. > - This pull request adds the shared remote MCP foundation and the PostHog definition. > - The benefit is a secure and reusable base for later app connection work. ## Linked Issues or Issue Description Refs #11965 This is stack 1 of 11. It replaces the first reviewable part of #11965. ## What Changed - Add guarded remote MCP setup and credential handling. - Add PostHog OAuth and API key connection methods. - Add focused server, shared contract, and UI coverage. - Keep the migration replay-safe and idempotent. - Give the late-close security regression the same 10-second CI headroom as the adjacent real-timer handshake test. - Synchronize fake-timer handshake tests at the exact ensure-session boundary so real filesystem setup cannot race the fake deadline. - Drive PTY overflow coverage only after listener registration so scheduling cannot reorder the test fixture. ## Verification - pnpm exec vitest run packages/adapter-utils/src/acpx-engine/execute.test.ts server/src/__tests__/plugin-worker-manager.test.ts (220 passed; affected cases also passed five focused stress repetitions) - `pnpm exec vitest run packages/adapter-utils/src/acpx-engine/execute.test.ts -t "never leaks a sandbox-provided value from a late close rejection into logs or the result"` (1 passed) - `pnpm exec vitest run packages/adapter-utils/src/acpx-engine/execute.test.ts -t "never promotes a late ensureSession resolution|closes a late-resolving real handle exactly once"` (2 passed) - `pnpm -r typecheck` - `pnpm --filter @paperclipai/server exec vitest run src/__tests__/tool-access-service.test.ts` - `pnpm --filter @paperclipai/db check:migrations` - `pnpm build` ## Risks - Remote endpoint validation can reject configurations that previously passed without checks. - OAuth configuration errors can block setup until the operator corrects the provider settings. - The migration uses guarded statements so repeated execution is safe. - The test-only synchronization changes do not affect runtime behavior; they remove filesystem/fake-clock and listener-registration races observed under parallel CI load. > I checked `ROADMAP.md`. This stack continues the existing app connection work from #11965 and does not duplicate another planned item. ## Model Used OpenAI Codex, GPT-5. The runtime model ID and context window were not exposed. The model used reasoning, tool use, and code execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-08-29 12:08:32 -05:00
Nicky LeachandPaperclip	a20a4944ec	feat: add Grok device login to the sandbox login panel (#12469) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Paperclip uses adapters to connect agents and model providers to its control plane > - The sandbox login panel supports displayed-code login for selected adapters > - Grok users need the same login path and a private credential home for later runs > - This pull request adds Grok support to the shared device-login path and preserves the existing Codex path > - The benefit is one secure login flow for both adapters with company-scoped credential storage ## Linked Issues or Issue Description **Agent or provider** Grok Local needs displayed-code login support in the sandbox login panel. **Why this adapter is useful** This change lets users sign in to Grok from the sandbox login panel. It also gives later Grok runs access to the stored credential. **How the agent is invoked** The Grok local adapter uses its login command through the shared displayed-code login flow. Later runs receive the managed home through `GROK_HOME`. **Additional context** The change uses adapter-scoped login lifecycle handling. It stores the credential in a company-scoped directory with mode `0700`, and it stores the credential file with mode `0600`. ## What Changed - Rename the shared device-login modules to adapter-neutral names. - Scope the shared login lifecycle to a closed adapter set. - Return the device-login URL that the provider prints. - Add the Grok prompt parser, login command, capability, and login panel entry. - Store the Grok credential in a private, company-scoped home directory. - Pass `GROK_HOME` to later Grok runs. - Add tests for the Grok adapter, the Daytona sandbox provider, the server login path, and the user interface. ## Verification - Run `pnpm vitest run packages/adapters/grok-local/src/server/adapter-auth-promotion.test.ts`. - Run the Grok adapter package suite. - Run the Daytona sandbox provider suite. - Run the server device-login suites. - Run the user interface suite. - Confirm the full CI suite passes. ## Risks The change extends shared login lifecycle code to another adapter. A regression could affect Codex login. The credential path uses explicit `chmod` calls to keep the directory at mode `0700` and the file at mode `0600`. ## Model Used OpenAI Codex, GPT-5. The runtime used tool calls and code review support. The runtime did not provide a context-window value. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-08-28 21:48:34 -07:00
Nicky LeachandPaperclip	e127faa14c	fix(adapter-utils): bound the ACP startup handshake and fence the abandoned session promise (#12454) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Adapter utilities start and control agent sessions. > - The ACP startup handshake can stay pending when the sandbox transport closes. > - A pending handshake keeps the run active and prevents a clear operator result. > - This pull request bounds the handshake and fences its abandoned promise. > - The result gives each startup failure a terminal state and a safe host-authored diagnostic. ## Linked Issues or Issue Description No matching public issue or pull request appeared in the GitHub search for this failure. The issue details follow. **What happened?** The adapter engine awaited `runtime.ensureSession()` without a startup bound. A lost sandbox transport could leave the await pending. **Expected behavior** The engine must end the run when the startup deadline expires or the duplex transport closes. A late session result must not reopen the settled run. **Steps to reproduce** 1. Start an ACP-backed agent run. 2. Keep the ACP initialization call pending. 3. Let the startup deadline expire or close the duplex transport. 4. Confirm that the run reaches a terminal state and that a late session result does not reopen it. **Paperclip version or commit** `66e1c0df8b23cb8354b36dd446d9548dc4389191` merge base. **Deployment mode** Local dev (`pnpm dev`). **Installation method** Built from source (`pnpm dev`). **Agent adapter(s) involved** Custom / external plugin adapter. **Database mode** Not database-related. **Relevant logs or output** The new tests use fixed host-authored diagnostics for handshake guard failures and late close failures. **Additional context** The change updates the execution semantics document and adds regression coverage. The three existing failures in `execute.test.ts` also occur at the merge base. ## What Changed - Bound `runtime.ensureSession()` with a startup deadline and a duplex transport loss check. - Added terminal error codes for handshake timeout and transport loss. - Fenced late session resolution and rejection so the settled run has one owner. - Suppressed sandbox-controlled diagnostic values on the guard-failure and late-close paths. - Added regression tests for timeout, transport loss, late resolution, and late close rejection. - Documented the startup live-path contract. ## Verification - `pnpm --filter @paperclipai/adapter-utils exec tsc --noEmit` exits 0. - The engine test suite runs from the repository root. - The new regression cases pass. - The three known failures remain the only failures and also fail at the merge base. The board approved this pre-existing test exception. - Cold start and session resume cases pass. - All required GitHub checks pass. - Greptile reports 5/5 with no open P2 findings, recommendations, or follow-ups. ## Risks The startup guard changes only the ACP startup path. A slow but valid startup can now end at the configured deadline. The fence closes a late handle once and records fixed host-authored diagnostics. ## Model Used OpenAI Codex, GPT-5, current model version, tool use and code execution, with the full task context. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally. Three pre-existing failures remain and have an approved exception. - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-08-28 12:21:37 -07:00
Nicky LeachandPaperclip	dc7a1a020a	fix(adapter-utils): skip the remote session close when the duplex channel is already lost (#12394) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The adapter runtime settles each run through a duplex control channel > - A lost channel can leave the remote session-close call without a usable peer > - The call has no deadline, so run teardown can wait for the full adapter timeout > - This pull request skips that remote call after the runtime latches channel loss > - The benefit is faster run finalization while the local cleanup effects remain ## Linked Issues or Issue Description **What happened?** The run teardown placed a remote session-close call over a duplex control channel that the runtime had already latched as lost. The call blocked until the adapter execution timeout released it. **Expected behavior** Run teardown should release the local warm handle and continue when the duplex control channel has already failed. **Steps to reproduce** 1. Start an adapter run with the duplex control channel. 2. Latch a channel-loss state before settlement. 3. Use a runtime whose close call never resolves. 4. Confirm that teardown returns without a remote close call. **Paperclip version or commit** Commit d966069a78. **Deployment mode** Built from source. **Agent adapter(s) involved** Not adapter-specific. The change applies to the shared adapter runtime. **Database mode** Not database-related. **Additional context** Pull request #12373 used a larger approach for the same failure. The board closed that pull request. This pull request contains the smaller change. ## What Changed - Add the required readonly `skipRemoteClose` field to the runtime settlement plan. - Set the field from the latched channel-loss state on the turn-finalize plan. - Set the field to `false` on every other settlement plan. - Release the warm handle locally before the `end_session` step returns without the remote call. - Add a test that drives the lost-channel path through the settlement sequence. ## Verification - `./node_modules/.bin/tsc --noEmit -p packages/adapter-utils` - `./node_modules/.bin/vitest run packages/adapter-utils/src/acpx-engine/execute.test.ts` passes the new test. Three existing tests fail on the merge base: two session-fingerprint tests and one workspace-hints test. - `./node_modules/.bin/vitest run packages/adapter-utils/src/acpx-engine/run-fault-matrix.test.ts` reports 20 passed. - Full CI will run on this pull request. ## Risks The skipped remote close also skips the vendored runtime caller for `closeBackendSession`. The run can keep a retained client after duplex loss. A separate follow-up owns that residual. The environment lease still releases in the teardown `finally` block. ## Model Used OpenAI Codex, GPT-5, with tool use and code review assistance. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-08-27 22:08:08 -07:00
Nicky LeachandPaperclip	198fc8b281	fix(adapter-utils): harden the referenced-project ignore scan (#12214) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Agent adapters stage referenced projects into controlled sandboxes > - The ignore scan must preserve exact Git path bytes and fail closed on unsafe input > - Unbounded ignored-path data and raw diagnostics can harm resource use or expose host details > - This pull request adds exact path parsing, input bounds, fixed failure categories, and saturation-only retry > - The benefit is safer and more predictable referenced-project staging ## Linked Issues or Issue Description **What happened?** The referenced-project ignore scan trimmed NUL-delimited Git paths. It also accepted a large ignored-path set and exposed raw failure details through staging errors and warnings. **Expected behavior** The scan must preserve leading and trailing whitespace in Git paths. It must reject oversized ignored-path data and expose only fixed failure categories. **Steps to reproduce** 1. Run the referenced-project ignore scan with paths that start or end with whitespace. 2. Provide more than 10,000 ignored entries or more than 2 MiB of path bytes. 3. Trigger a scan failure and inspect the reported reason. **Paperclip version or commit** d560bc2ae2 **Deployment mode** Built from source. **Installation method** Built from source. **Agent adapter(s) involved** Not adapter-specific. **Database mode** Not database-related. **Additional context** This change covers the overlay diff, untracked, deleted, and ignored Git paths. It also retries only typed scheduler saturation failures. ## What Changed - Preserve all bytes in NUL-delimited Git path records. - Bound ignored-entry count and total UTF-8 path bytes during parsing. - Redact scan failure details to three fixed reason categories. - Retry only the typed scheduler saturation error, with three total attempts and 1 second then 2 second waits. - Add tests for path whitespace, limits, diagnostics, retry behavior, and scheduler code parity. ## Verification - `npx tsc --noEmit` in `packages/adapter-utils` passed. - `npx vitest run packages/adapter-utils` passed with 977 tests and 4 skipped. - Continuous integration must run the server suite and the full repository gates. ## Risks The scan now rejects ignored-path data above fixed limits. Saturation retries add up to 3 seconds before a final failure. The resolver still fails closed for all other errors. ## Model Used OpenAI GPT-5. The model used tool calls, code inspection, and command execution. The exact context window and reasoning mode are not exposed by the runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-08-26 08:30:42 -07:00
DottaandPaperclip	a9d0927fe8	fix(adapters): restore Paperclip skill for legacy runners (#12225) ... <!-- Write all pull request text in Simplified Technical English (ASD-STE100): short sentences, one instruction per sentence, simple approved vocabulary, and the active voice. --> ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Legacy local adapters run agents that use the Paperclip skill for the control-plane workflow. > - PR #7029 removed the required-skill fallback and made runtime skill selection depend only on stored preferences. > - No migration or runtime fallback replaced that behavior for existing agents or non-CEO agents. > - PR #12138 added core skills to new CEOs, and PR #12147 added Claude skill discovery. These changes did not mount the operational skill for all legacy agents. > - This pull request makes the operational skill a legacy adapter runtime invariant. It keeps all other skills configurable. > - The native runner stays unchanged because its protocol supplies the control-plane contract. > - The benefit is that new and existing legacy agents can always operate through Paperclip. ## Linked Issues or Issue Description Refs #7029 Refs #12138 Refs #12147 **What happened?** A skill-capable legacy local agent could start without `paperclipai/paperclip/paperclip`. This happened when the agent had no stored skill preference. An explicit empty preference also removed the skill. The agent then reported that the Paperclip skill was not available. **Expected behavior** Every skill-capable legacy local adapter must mount the Paperclip operational skill when the runtime inventory contains it. Optional skills must remain configurable. The native runner must keep its current protocol-based behavior. **Steps to reproduce** 1. Create a non-CEO `codex_local` agent without `paperclipSkillSync` preferences. 2. Start a legacy heartbeat. 3. Inspect the managed `CODEX_HOME/skills` directory. 4. Observe that the Paperclip skill is absent before this change. **Paperclip version or commit** The problem reproduces on `master` before this pull request. PR #7029 introduced the configured-only selection behavior. **Deployment mode** Local development and self-hosted legacy local adapters. ## What Changed - Added a shared legacy skill resolver that always selects the canonical Paperclip operational skill when it is available. - Applied the resolver to direct adapter execution, ACPX execution, skill snapshots, and persistent skill sync. - Added Hermes skill materialization at sync and run boundaries. - Aligned Cursor, Gemini, and OpenCode execution-time injection with the configured child `HOME`. - Made Hermes stop execution when another installation blocks the required operational skill. - Kept optional skills controlled by `paperclipSkillSync.desiredSkills`. - Kept `paperclip_runner` on the configurable-only resolver. - Added regression coverage for missing preferences, empty preferences, each skill-capable legacy adapter, ACPX, Hermes, and native runner isolation. - Documented the legacy runtime invariant. ## Verification - `pnpm -r typecheck` passed on the pushed commit. - `pnpm build` passed on the pushed commit. - The adapter utility regression suites passed: 236 tests. - The changed server adapter suites passed: 48 tests across 12 files. - The OpenCode adapter suite passed: 8 tests. - The Hermes adapter suite passed: 7 tests. - `git diff --check` passed. - `pnpm test:run` is not clean on this macOS host. The command reported failures in unchanged workspace and filesystem suites. An isolated rerun of `company-skills.test.ts` and `company-skills-service.test.ts` reproduced 11 failures because macOS resolved `/var/...` paths as `/private/var/...`. The changed adapter suites pass independently. ## Risks - This change deliberately makes the operational skill non-removable for skill-capable legacy local adapters. - Existing agents receive the skill on their next list, sync, or run boundary. No database migration is required. - The resolver does not create a skill when the runtime inventory does not contain the canonical entry. - Hermes aborts a run if another installation occupies the required operational skill target. - Hermes removes only an undesired Paperclip-owned symlink that still points to the known Paperclip source. - The native runner does not receive the legacy default. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used OpenAI Codex based on GPT-5. The exact serving model ID and context window were not exposed. The agent used reasoning, tool use, and code execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-08-26 09:45:24 -05:00
Nicky LeachandPaperclip	822e0aed93	fix(adapter-utils): move the workspace-restore merge lock to an instance-scoped root and surface restore failures on the run (#12187) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Agent adapters restore sandbox work into project workspaces after a run > - The restore lock used the target workspace parent, which can reject writes > - The teardown then hid restore errors, so a run could report success with lost work > - This pull request moves the lock into an instance-scoped root and reports safe restore failure codes > - The benefit is reliable restore coordination and visible failure evidence without changing run success semantics ## Linked Issues or Issue Description Refs: #10914 ## What Changed - Move the workspace-restore merge lock into a private, instance-scoped root. - Derive the lock key from the canonical target path with SHA-256. - Resolve the lock root from the caller environment and reject unsafe root types. - Classify restore failures with three allowlisted codes. - Add the failure code to run result JSON without exposing a host path or process identifier. - Keep restore failure fail-open for the run exit code and run status. ## Verification - Run `npx vitest run packages/adapter-utils/src/workspace-restore-merge.test.ts`. - Run `npx vitest run packages/adapter-utils/src/acpx-engine/run-fault-matrix.test.ts`. - Run the four Codex credential suites. - Confirm the branch includes the current `master` commit and no manual lockfile edit. - Confirm all pull request checks and the Greptile review reach a terminal green state. ## Risks - The lock path changes for workspace restore and removes the sibling-directory fallback. - A misconfigured or inaccessible instance home can still stop lock setup. - Restore remains fail-open, so callers must inspect the result evidence when a restore fails. ## Model Used OpenAI GPT-5. The model used tool calls and code execution to validate and route an author-provided change. The implementing engineer authored the code. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-08-25 14:32:14 -07:00
Nicky LeachandPaperclip	6880213de5	fix(adapter-utils): honor .gitignore for referenced-project staging (#12184) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Sandbox adapters stage project files before an agent starts. > - Referenced projects ignored Git-ignored paths and copied large local directories. > - This behavior increased staging time and disk use, and it differed from anchor workspaces. > - This pull request resolves Git-ignored paths once and shares that result across all referenced-project consumers. > - The benefit is smaller, faster, and consistent project staging. ## Linked Issues or Issue Description No public GitHub issue exists for this bug. **What happened?** Referenced-project staging copied Git-ignored paths, except for a fixed list of heavy directory names. A large repository therefore used much more time and disk space than the same repository in an anchor workspace. **Expected behavior** Referenced-project staging should exclude the same Git-ignored paths that the workspace staging path excludes. **Steps to reproduce** 1. Create a referenced project with a large Git-ignored directory. 2. Start a sandbox or SSH run that stages the referenced project. 3. Observe that the ignored directory enters the staged content. **Paperclip version or commit** Commit `9964b034bbff24e700c8eccf5a8b1fc3daa44bf2`. **Deployment mode** Built from source. ## What Changed - Resolve each referenced project's Git-ignored paths once before staging. - Carry the resolved paths as a required field on `SandboxAdditionalSource`. - Reuse the resolved paths in sandbox staging, SSH staging, and content-signature code. - Harden the read-only Git helper with a bounded process, a reduced environment, and disabled system and global configuration. - Fail closed on Git errors, timeouts, and invalid path relations. - Escape tar glob metacharacters in ignore-derived exclude entries. - Add and update unit tests for the resolver and its three consumers. ## Verification - `pnpm vitest run --config packages/adapter-utils/vitest.config.ts` passes 266 tests locally. - `pnpm exec tsc --noEmit -p packages/adapter-utils/tsconfig.json` passes locally. - CI must pass on this pull request. - Greptile must report 5/5 with no unresolved comments before merge. ## Risks - A Git error or timeout now prevents staging for the affected referenced project. - The resolver uses a bounded read-only Git process and fails closed by design. - The change stays inside `packages/adapter-utils` and does not change the database schema. ## Model Used Claude Sonnet 5 (Anthropic) assisted the implementation with code execution and tool use. The exact context window and reasoning mode are not recorded. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-08-25 14:22:47 -07:00
Nicky LeachandPaperclip	2862e18484	refactor(adapter-utils): remove the retired duplex_v1 sandbox bridge transport (#12171) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The adapter utilities provide sandbox transport paths for agent execution > - The retired `duplex_v1` path remains in host, gateway, and test code after `http2_v1` replaced it > - Retired transport code adds maintenance cost and leaves an unsafe fallback for unknown gateway modes > - This pull request removes the retired path, moves shared `http2_v1` contracts to a leaf module, and closes mode dispatch to a fixed allowlist > - The benefit is a smaller transport surface and explicit failure for unsupported modes ## Linked Issues or Issue Description Refs #12120 The `http2_v1` transport replaced `duplex_v1`, but the retired broker, gateway, constants, and tests remain in the adapter utilities. An unknown bridge mode can also fall through to the queue gateway when a queue directory exists. This change removes the retired code and rejects unsupported modes before gateway selection. ## What Changed - Delete the host `duplex_v1` broker and its transport-only tests. - Delete the in-sandbox duplex gateway and retired mode constants. - Move shared `http2_v1` symbols into `bridge-transport-contract.ts`. - Update the remaining importers and repair their focused tests. - Validate bridge modes against `http2_v1` and `queue_v1` before queue lookup. - Keep `queue_v1`, `duplex-frame-codec.ts`, and duplex telemetry dimensions unchanged. ## Verification - [x] `npx tsc --noEmit -p packages/adapter-utils` passes. - [x] `npx vitest run packages/adapter-utils/src` passes: 48 files and 968 tests pass, with 4 pre-existing platform skips. - [x] Full CI is green on this pull request. - [x] Greptile review is complete and every finding is resolved. ## Risks The change removes an internal transport that no host path selects. The main risk is an overlooked import or test dependency. Targeted typecheck and tests cover the adapter utility package. Full CI must confirm workspace-wide compatibility. ## Model Used Anthropic Claude Sonnet 5 assisted with the implementation, as recorded in the commit. The commit does not record a context-window size or reasoning mode. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-08-25 08:47:43 -07:00
Nicky LeachandPaperclip	16b59c9315	feat(adapter-utils): stream duplex bridge bodies as sequenced chunks with receive-side spill (#12006) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Agent adapters use a duplex bridge to send requests and responses across an isolated boundary > - The bridge held each request body and response body in memory on both ends > - Large bodies can exhaust memory and reduce the safe size of adapter traffic > - This pull request sends receive-side bodies as sequenced chunks and spills large bodies to disk > - The benefit is bounded memory use with strict size, order, and cleanup checks ## Linked Issues or Issue Description **What existing behavior does this improve?** The adapter-utils duplex bridge transports request and response bodies across the sandbox boundary. **Current behavior** The bridge stores each complete body in memory on both ends of the duplex channel. **Proposed behavior** The bridge sends body chunks with sequence checks. The receive side keeps bodies up to 1 MiB in memory and spills larger bodies to a temporary file. **Reason and benefit** This change reduces memory pressure and keeps malformed or oversized input on a terminal error path. **Breaking changes** The duplex frame version changes to version 2. The request and response envelopes now carry bodyByteCount, and body_chunk frames carry the body data. ## What Changed - Add version 2 body_chunk frames with 256 KiB raw slices encoded as canonical base64 text. - Add receive-side memory and spill reassembly with per-channel disk and file limits. - Reject malformed, reordered, oversized, truncated, and non-canonical body chunks. - Stream reassembled request bodies to the host forward handler with a web stream and half-duplex request. - Remove spill files on success, failure, channel death, and startup cleanup. ## Verification - Run the adapter-utils type-check. - Run the adapter-utils duplex test suite. - Run all pull request checks. - Run the Greptile review and confirm a 5/5 score with no open findings. ## Risks The wire format changes from version 1 to version 2. Older bridge peers cannot use this protocol. The receive path adds temporary file operations and cleanup paths. The implementation fails closed when a body violates size or sequence rules. ## Model Used OpenAI GPT-5 Codex, tool-enabled coding agent. The exact context-window size and reasoning mode are not exposed by the runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with Fixes: # / Closes # / Refs # OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub #NNN / github.com/paperclipai/paperclip URLs) - [x] My branch name describes the change (e.g. docs/..., fix/...) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-08-23 08:52:31 -07:00
Nicky LeachandPaperclip	cc42a67e7e	fix(adapter-utils): extend the duplex fail-closed run disposition to the CLI lane (#11966) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Paperclip runs agents through adapter execution lanes > - Duplex adapters can lose their control channel before a process completes > - The ACP lane already fails closed, but the CLI lane can report false success > - This pull request applies the same completion rule to the CLI lane and shares the loss code > - The benefit is consistent failure reporting when a duplex channel closes during a run ## Linked Issues or Issue Description **What happened?** A CLI-lane duplex run can lose its control channel before clean process completion. The run can then report `succeeded` with exit code 0 and no error code. **Expected behavior** The execution target must fail closed when the channel dies before clean completion. It must return exit code 1, the typed `duplex_channel_lost` error code, and a short stderr note. **Steps to reproduce** 1. Start a duplex adapter run through the CLI execution lane. 2. Close the duplex control channel before the process completes cleanly. 3. Inspect the run result and error code. **Paperclip version or commit** Commit `5e01523d4eb6df4a20a0bddd05374c9c42225203`. **Deployment mode** Built from source. **Installation method** Built from source with pnpm. **Agent adapter(s) involved** Claude Code, Codex, Cursor, Gemini, Kimi, OpenCode, and Pi local adapters. **Database mode** Not database-related. ## What Changed - Add an optional `errorCode` field to `RunProcessResult`. - Add a one-read completion seam to the execution target process options. - Fail closed when a duplex channel dies before clean process completion. - Add `settleRunDisposition()` to atomically read and mark orderly completion. - Share the typed duplex loss error code across the ACP and CLI lanes. - Mark non-success terminal results as orderly completion before teardown. - Wire the seam through the seven duplex adapters. - Add regression tests for channel loss, clean completion, and non-clean terminal results. ## Verification - `npx vitest run packages/adapter-utils/src/execution-target-sandbox.test.ts` — 118 passed. - `npx vitest run packages/adapter-utils/src/acpx-engine/execute.test.ts -t "sandbox duplex run-disposition seam"` — 4 passed. - The author confirmed a clean type-check for `@paperclipai/adapter-utils` and the seven duplex adapter packages. - Pre-existing environment failures remain outside this change. They include `EACCES mkdir '/srv/paperclip'` and remote file-size setup failures. ## Risks The change alters terminal status for CLI duplex runs that lose control before clean completion. The typed error code and stderr note keep the failure visible. The broker marks failed, cancelled, and timed-out results as orderly completion to prevent false loss events during teardown. ## Model Used OpenAI Codex, GPT-5, tool use and code execution, with the standard GPT-5 context window. The model assisted with the implementation and test work. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-08-22 11:12:51 -07:00
Nicky LeachandPaperclip	10d2781a29	feat(sandbox): add the duplex bridge broker, gated transport selection, and fixed observability (#11769) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Sandbox adapters provide controlled execution for untrusted provider environments. > - The sandbox channel needs one persistent duplex transport with strict host control. > - The transport must remain off unless the instance setting and provider capability both allow it. > - The host must detect loss, bound resource use, and expose only safe telemetry. > - This pull request adds the broker, gated selection, kill-switch wiring, fixed observability, and real-process proof. > - The benefit is safer sandbox execution with bounded failure behavior and inspectable transport results. ## Linked Issues or Issue Description No public issue exists for this change. The related pull requests are #11738 and #11750. **Problem or motivation** The sandbox duplex channel needs a host-controlled broker, strict transport gates, bounded provider input, and safe loss telemetry. Without these controls, a provider can cause replay, resource growth, unsafe endpoint selection, or data exposure through telemetry. **Proposed solution** Add a host broker with nested time limits, request limits, one-shot loss, and per-id deduplication. Select duplex transport only when the instance setting and provider capability both equal true. Assign the endpoint and nonce on the host. Reject invalid readiness data and use the file bridge on failure. Add fixed redacted telemetry and a real-process end-to-end test harness. **Alternatives considered** Keep the file bridge as the only transport. This avoids new channel behavior but does not provide persistent duplex operation for supported sandbox providers. **Roadmap alignment** This change supports the Cloud / Sandbox agents section in ROADMAP.md. ## What Changed - Add the duplex bridge broker with bounded forward, response, and gateway wait budgets. - Bound concurrent requests, lifetime requests, and request-id bytes before retention or forwarding. - Select duplex transport only when both required gates are true. - Assign the loopback port and nonce on the host and enforce a liveness-only READY frame. - Fall back to the file bridge after invalid readiness, contamination, bind failure, or timeout. - Carry the kill switch through the server, acpx engine, and six local adapters. - Add fixed, redacted duplex telemetry with a provider allowlist. - Add a real-process end-to-end harness for readiness, round trips, loss, and teardown. - Add regression coverage for limits, loss, UTF-8 splits, concurrency, and telemetry dimensions. ## Verification - Adapter-utils, server, and Daytona typechecks pass locally. - Adapter-utils tests pass, including the codec, broker, execution-target sandbox, and real-process harness. - Server kill-switch tests pass. - Live Daytona tests pass with the required provider key and skip without that key. - The root pnpm-lock.yaml file has no diff. - The branch contains ten commits after origin/master. ## Risks - Duplex transport remains disabled unless both gates equal true. - A provider remains an untrusted boundary and needs least-privilege credentials and quotas. - The server telemetry recorder stays deferred; the default recorder does nothing. - A provider that pre-binds the host port causes a fail-closed fallback to the file bridge. - The change adds no database migration and changes no root lockfile. ## Model Used OpenAI GPT-5, exact model family GPT-5, large context window, reasoning, and tool use. The model assisted with Git handoff validation and PR preparation. The implementation commits came from the engineering worktree. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with Fixes: # / Closes # / Refs # OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub #NNN / github.com/paperclipai/paperclip URLs) - [x] My branch name describes the change (e.g. docs/... or fix/...) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge - [x] I searched the GitHub PR list for similar PRs and confirmed this is not a duplicate --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-08-22 09:01:31 -07:00
nearfolk	c2cfd55e97	fix: exclude thought text from automatic issue comments (#11801) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The heartbeat system records agent runs and can add a run summary to an issue. > - The ACPX engine receives output text and internal thought text as separate streams. > - The default summary strategy joined both streams and could publish internal text in an issue comment. > - Paperclip already has final-output segmentation for run summaries. > - This pull request makes final-output-only summaries mandatory and removes the configuration bypass. > - The benefit is that automatic issue comments contain the intended final message instead of internal execution text. ## Linked Issues or Issue Description Refs #11761 **What happened?** The ACPX engine used the full summary strategy when an adapter did not set `summaryStrategy`. That strategy joined all text deltas, including thought-stream text and intermediate narration. The heartbeat finalizer could then store that summary as an issue comment. **Expected behavior** An automatic issue comment must use only the final output segment. Configuration must not allow thought-stream text or intermediate narration into that summary. **Steps to reproduce** 1. Run an ACPX adapter without a configured `summaryStrategy`. 2. Emit an output delta, a thought delta, a tool call, and a final output delta. 3. Read the generated run summary. 4. Observe that the old default included all text deltas. **Paperclip version or commit** `54b8bec44417511c623999613f9f1006f8af0517` **Deployment mode** Built from source with a local ACPX adapter. ## What Changed - Limit ACPX run summaries to the final non-empty output segment. - Ignore the legacy full-summary setting so configuration cannot bypass containment. - Update regression tests for the safe default and an attempted unsafe override. ## Verification - Observed the new guard fail before the implementation change because the summary contained thought text. - Ran `pnpm exec vitest run packages/adapter-utils/src/acpx-engine/execute.test.ts -t "defaults run summaries to the final output segment without thought text|does not allow configuration to include thought text in run summaries"`. Result: 2 passed. - Ran `pnpm exec vitest run packages/adapter-utils/src/acpx-engine/execute.test.ts`. Result: 130 passed. - Ran `pnpm --filter @paperclipai/adapter-utils typecheck`. Result: passed. ## Risks - Run summaries are shorter for adapters that relied on full text aggregation. - The old `summaryStrategy: "full"` setting no longer changes summary behavior. This is an intentional containment change. - The change does not alter run logs or tool events. It changes only the summary selected for downstream use. > This is a focused security and privacy bug fix. It does not add roadmap scope. ## Model Used - OpenAI Codex on the GPT-5 family. The runtime did not expose the exact model ID or context-window size. Reasoning, tool use, terminal execution, and code editing were enabled. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change and contains no internal task id - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant inline documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [ ] I will address all Greptile and reviewer comments before requesting merge	2026-08-20 15:48:34 -07:00