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| Author | SHA1 | Message | Date | |
|---|---|---|---|---|
 DottaandClaude
|
289b402c26 |
fix(runner): settle a saved governed wait whose parked turn was lost on restore (#20519)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - A native agent run can ask the board a question and park on that saved (governed) wait > - PR #20494 made a saved wait settle after a control-plane restart for Codex, which reports the parked turn as interrupted > - Claude runs through ACPX. After a kill -9 restart, Runnerd restores the conversation and reports the parked turn as `turn.failed` with `provider_turn_lost_on_restore` > - The governed-wait drain and the saved-replay check rejected every failed terminal as unproven, so the saved question failed and the task needed a human Retry > - Runnerd emits `provider_turn_lost_on_restore` only after it proves that the old provider lifetime ended. That is the same proof as an interrupted terminal > - This pull request accepts that recoverable restart loss as proof for a saved governed wait, and only that failure > - The benefit is that a Claude question survives a control-plane kill the same way a Codex question does ## Linked Issues or Issue Description Refs #20494. Related: #20498 (Claude lost cancel reply; this change does not touch that code). **What happened?** Restart chaos wave w-20261110T094930-s214 (Claude, Q1, PV1 and PV2 with `--provider-fault-restart K1`) failed 2 of 2 Q1 tasks with `R3:retry_needed`. The asking run ended `failed` with `native_provider_terminal_failed`. Its events show the question saved, the K1, recovery with `native_governed_wait_settlement_pending`, and then `turn.failed` with `provider_turn_lost_on_restore` for the parked turn. The thrown `providerCode` was `governed_wait_provider_terminal_unproven`. **What did you expect?** The saved question settles after the restart. The asking run ends `succeeded`. The board answer wakes the agent without a Retry. **Steps to reproduce** Run the harness with `--adapters claude --workloads Q1 --faults PV1,PV2 --provider-fault-restart K1 --provider-fault-delays 3 --provider-fault-restart-after-seconds 1 --concurrency 1 --tasks 4`. The new unit-test variants `lost-on-restore-after-restart` and `lost-on-restore-saved` failed with the same `providerCode` before this change. ## What Changed - `native-session-runtime.ts`: add `governedWaitTerminalProven(event)`. A failed terminal proves the stop only when `isNativeRestartInterruption(error)` is true (code `provider_turn_lost_on_restore`, `recoverable: true`). Other terminals keep the old rule (`providerTerminalObserved !== false`). - The governed-wait accounting drain and the saved-replay check both use that helper. - Tests: two new variants of the #20494 test (a lost terminal after the restart, and a lost terminal already saved before the next recovery). Two new rejection cases: a non-restart failed terminal and a non-recoverable restart loss still fail with `governed_wait_provider_terminal_unproven`. ## Verification - `pnpm --filter @paperclipai/paperclip-runner exec vitest run src/native-session-runtime`: 265 tests pass. The two new settle variants failed before the fix. - `pnpm --filter @paperclipai/paperclip-runner exec tsc --noEmit -p .` passes. - A live restart chaos wave on this branch (Claude Q1, PV1/PV2 + K1) is linked in a comment below when it finishes. ## Risks - Low risk. The change accepts one more terminal as proof for a saved governed wait. That terminal comes only from Runnerd after it proves the old provider lifetime ended, and the code already trusts it to continue a restart-lost turn (`nativeRestartInterruptedTurnId`). - A failed terminal with any other code, or a non-recoverable restart loss, is still rejected. ## Model Used - Claude (Anthropic), model ID `claude-opus-5-5`, with tool use and code execution in Claude Code. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [ ] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude <noreply@anthropic.com> |
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|
DottaandClaude
|
8b3348c6ba |
fix(runner): classify Claude's rejected selected model as an unavailable model (#20513)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work
> - Native runner agents on the Claude (ACPX) provider run with the
model the user saves on the agent
> - When the provider cannot run that model, Paperclip should classify
the run as `native_provider_model_rejected`, ask the user to choose a
model, and let Retry finish the task
> - Claude Code accepts an unknown model at session start and reports it
only on the first turn, as an AIR `request` failure with a fixed title.
The runner reported it as an unknown provider failure
> - So the run failed as `native_provider_terminal_failed`, and the task
stopped with `provider_effect_inventory_unavailable` ("Automatic
recovery stopped. Recorded work is preserved…") without naming the model
> - This pull request classifies that Claude title as an unavailable
model, the category the native runtime already turns into
`native_provider_model_rejected`
> - The benefit is that an unknown Claude model asks for a model choice
and names it, as Codex does after #20488
## Linked Issues or Issue Description
**What happened?**
Config wave `w-20261110T094430-s207-cf` on `master` (
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DottaandClaude
|
a09093a5c5 |
fix(native): resume a run whose turn.start a restart cut off before Codex created the turn (#20507)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - A native Codex run sends `turn.start` to its runner, and the runner sends `turn/start` to Codex. The runner marks the start "ambiguous" before it sends the request > - A control-plane restart can kill the runner and Codex while that request is in flight. After the restart, neither journal says whether Codex created the turn, and the resumed thread has no active turn > - The restored runner then failed closed on every same-run resume with "cannot safely recover an ambiguous Codex turn start without an active replacement turn". The answer never reached the agent > - The next run on the task was refused at the runner-state fence (`prior_owner_terminal_state_indeterminate; retirement_refused=journal_commands_unsettled(turn.start.failed)`) before it asked for a runner. Retry after that run then waited forever on `process_identity_missing` for a process that never existed > - This pull request lets the runner prove from Codex's own thread history that the start never created a turn, and then resume and start the turn once. It also lets Retry continue after a run that the runner-state fence refused before launch > - The benefit is that a turn start cut off by a restart continues by itself when Codex never saw it, and a person's Retry is no longer a dead end ## Linked Issues or Issue Description **What happened?** Local restart-chaos wave `w-20261110T033426-s108`. Command: `--env local --adapters codex --workloads Q1,Q2 --faults K1 --triggers answered --tasks 4 --concurrency 2 --seed 108`. Task t03 (Q2): the answer run `92a57f50` resumed after the first restart. A second K1 restart landed 0.25 s after `session.resumed`, while its `turn.start` was in flight. Each same-run resume then failed with `PRP command session.snapshot failed: cannot safely recover an ambiguous Codex turn start without an active replacement turn`. When the prerequisite finished, the next run `0e6aa9d1` failed before launch with `runner_state_identity_mismatch: prior_owner_terminal_state_indeterminate; retirement_refused=journal_commands_unsettled(turn.start.failed)`. The accepted Retry (202) never created a run: the task stayed on `retryWait.reason=process_identity_missing` until the wave timed out (`R3:retry_no_new_run`). **Expected behavior** If Codex never created the turn, the run resumes and starts it once by itself. If that cannot be proven, a person's Retry starts a new run instead of waiting forever. **Steps to reproduce** 1. Run the wave command above on master. 2. Or run `pnpm --filter @paperclipai/paperclip-runner exec vitest run src/live/runnerd-codex-transport-cut-turn-start.test.ts` on master (case "before" fails with the wave error). ## What Changed - Runner (`codex_provider.rs`, `provider_backend.rs`): when the restored provider state has an ambiguous turn start, no active turn before the loss, and the resumed thread has no active turn, the runner reads the newest turn of the thread (`thread/turns/list`, limit 1, metadata only, the same request `read_thread` already sends). If there is no turn, or the newest turn is one Paperclip already settled, Codex never created the turn. The runner clears the ambiguity, emits a `harness.diagnostic` with code `ambiguous_turn_start_not_created`, and restores an idle session. The old `turn.start` stays `execution_indeterminate` and is never executed again. The same-run resume then starts the run's turn once, through the existing "recovered session without an active turn" path. - Any other history (a turn Paperclip never settled, an in-progress turn, an incomplete page, a non-Codex provider) keeps today's fail-closed error. The probe runs only on this recovery path. The normal turn path does no new work before `turn.start`. - Server (`native-local-process-stop.ts`): `nativeRunNeverLaunched` also accepts a failed native run whose error is the runner-state fence refusal `runner_state_identity_mismatch: prior_owner_*` (or `legacy_prior_owner_*`). The executor throws it only while it migrates another run's saved state, before it requests a launch. The existing evidence check still applies: any launch request, identity record, `adapter.invoke` or runner event keeps the run held. Other runner-state errors (for example `authority_indeterminate`) stay held. - Fake Codex (`fake-codex-app-server.rs`): keeps the thread's turn history in a `<state-file>.turns` sidecar, so `thread/turns/list` returns history like real Codex (newest first, honours `limit`). New `--hang-turn-start <file>` holds `turn/start` "before" or "after" the thread records the turn, to model a kill in flight. - Tests: - New real-runnerd test `runnerd-codex-transport-cut-turn-start.test.ts`. A real runner and fake Codex start a turn; both processes are killed while `turn/start` is in flight. "before": the resumed run completes, the journal holds the old `turn.start` (`execution_indeterminate`) and one new completed `turn.start` with the same task text, and Codex saw exactly one more `turn/start`. "after": recovery still fails closed and no new `turn/start` is sent. - Rust: `ambiguous_turn_start_that_never_created_a_turn_recovers_and_starts_once` and `ambiguous_turn_start_that_created_an_unsettled_turn_still_fails_closed`. Both rewrite saved provider state the way a master runner wrote it, so they also cover state saved before this change. - `explicit-native-continuation.test.ts`: five new rows for the runner-state fence. Admitted: refused before launch (with and without a coordinator). Held on `process_identity_missing`: refused after a launch request, refused after a runner event, and a run that failed its own `authority_indeterminate` check. - `docs/durable-recovery.md`: describes both behaviours. ## Verification - Red/green, real runnerd: on master (the staged master runnerd), `runnerd-codex-transport-cut-turn-start.test.ts` "before" fails with `PRP command runner.drain failed: ... cannot safely recover an ambiguous Codex turn start without an active replacement turn`, the wave error. With this change, both cases pass. - Red/green, Rust: without the `provider_backend.rs` change, `cargo test -p paperclip-runner-core --test codex_provider ambiguous_turn_start_that` fails the "never created" test. With it, both pass. The full `cargo test -p paperclip-runner-core` passes. - Red/green, server: without the `native-local-process-stop.ts` change, the two "refused at the prior-owner runner-state fence" rows fail with `process_identity_missing`. With it, all 14 rows pass. - Related suites pass: 11 Runner transport files, 419 tests (`runnerd-codex-transport`, `-attachment-recovery`, `-cold-restore`, `-warm-attachment`, `-release-resume`, `-cut-attach`, `-cut-turn-start`, `-settlement`, `-suspension`, `runnerd-restart-continuation`, `runnerd-saved-continuation`); server `explicit-native-continuation`, `quarantined-task-retry` and `issue-confirm-run-stopped-routes`, 3 files, 470 tests; full `cargo test -p paperclip-runner-core`. - `pnpm --filter @paperclipai/paperclip-runner exec tsc --noEmit` and server `tsc --noEmit` pass. - Pack `contractDigest` is unchanged: `sha256:3164357d…` before and after (`scripts/contracts/contract-fingerprints.mjs`). - Live proof: the wave command above on this branch. Results follow in a comment. **No duplicate provider work.** The runner starts a new turn only when Codex's own history proves the cut-off start created nothing. The old command is never executed again (the runner refuses an `indeterminate` command). A recorded turn that Paperclip never settled keeps the run failed closed. ## Risks - Low-medium risk. The runner change runs only while it restores a session whose saved state has an ambiguous turn start and no active turn. Before this change, that run could never continue. - The proof relies on Codex recording a turn in the thread before it runs anything. If Codex accepted the request but died before it wrote the turn, the runner treats the start as not created and starts the turn once. Codex writes the user turn to the thread when it starts the turn, before it asks the model for output, so no model output or tool call is expected without a recorded turn. - If the thread's newest turn is not in the runner's settled set (for example after a provider identity epoch rollover forgot older identities), the runner keeps failing closed, as today. - **Open decision (not changed here):** when Codex did record the cut-off turn, it may have done work. This pull request keeps the run failed closed and does not replay or adopt that turn. Continuing is a person's decision through Retry or a new message. - The server change trusts the executor's own error text `runner_state_identity_mismatch: prior_owner_*`, together with the absence of every launch and runner event. A run that requested a launch keeps every stop proof. - **Runner release:** the pack `contractDigest` does not change. Local runners use the runnerd built with the app, so the fix applies with this release. - Not covered: the related `authority_indeterminate` variant in the same wave (t04, Q1) is a separate cause; its Retry already worked in that wave. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), via Claude Code with tool use (shell, file edits, test execution). ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Refs #20477, #20482 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude <noreply@anthropic.com> |
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DottaandClaude
|
914e3ae14f |
fix(runner): settle ACPX turns when the cancel reply is lost (#20498)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Claude agents run through the native Runner and the ACPX sidecar > - A saved question or a board Stop cancels the active turn with `turn.cancel` > - The Runner waited 30 s for the sidecar's reply to that cancel, and the Runner serves controller commands one at a time > - When that reply was lost, the controller's shutdown commands timed out first, so the run failed and the task needed a human Retry > - This pull request bounds that wait, keeps the transport open, and lets the provider's own turn terminal settle the turn > - The benefit is that a lost cancel reply on Claude settles the same way it already does on Codex (#20336) ## Linked Issues or Issue Description Refs #20336 (Codex equivalent: settle a saved handoff after verified shutdown). Related, no overlap: #20477, #20482, #20483. **What happened?** The restart-chaos harness dropped the ACPX sidecar's reply to the Runner's `turn.cancel` (fault PV2, target `interrupt_ack`). A Claude task that saved a question (Q1) failed with "The waiting state is saved; confirming shutdown of the previous execution is still pending". Its next attempt failed `native_session_cleanup_quarantined`. A Claude task stopped by the board (S1) ended `blocked`. Retry was accepted but started no run. Cause, in `packages/paperclip-runner/runner/crates/runner-core/src/acpx_provider_session.rs` (`interrupt_turn`, master line ~800): the cancel used the ordinary sidecar request with the 30 s bound from `acpx_provider_backend.rs:539`. While it waited: - `turn.stop` and `runner.suspend` stayed queued. The controller's 15 s governed drain plus its 10 s close grace ran out first (`runner did not durably suspend before checkpoint`, suspend command `pending`). - At 30 s, `fail_closed` killed the sidecar and dropped the provider's buffered turn terminal. The poll path then recorded `turn.failed` (`acpx_provider_transport_failed`) and `provider_exit_unconfirmed` (`acpx_provider_backend.rs:2716-2738`). `turn.stop` returned `already_settled`, and `runner.suspend` refused with `ACPX provider lifetime cleanup is not yet proven` (`acpx_provider_backend.rs:2613-2621`). Codex passes the same fault because its Runner does not block on the interrupt reply. **Expected behavior** A lost cancel reply must not fail the run. The saved question must settle as `succeeded`. A board Stop must end the run as cancelled with a proven suspension, so the next turn can start. **Steps to reproduce** `node cli/node_modules/tsx/dist/cli.mjs tests/restart-chaos/main.ts --env local --adapters claude --workloads Q1,S1 --faults PV2 --provider-fault-message interrupt_ack --concurrency 1 --tasks 4` Failing wave on master: `w-20261110T060120-s207` (t04, t05). **Deployment mode** Native Runner with the Claude ACPX profile, local. Hosted sandboxes run the same Runner code. ## What Changed - `AcpxSidecarTransport::request_turn_cancel`: sends `turn.cancel` and waits only to a caller deadline. On a missing reply it keeps the transport usable and retains the request ID, so a late reply is skipped in both the response and the event-poll paths. A rejected reply and transport errors keep their existing fail-closed result. - `AcpxProviderSession::interrupt_turn`: waits at most 5 s (or the shorter configured request bound) for the cancel reply. On a missing reply it retires the runtime from warm reuse and returns. The provider's turn terminal still arrives through polling, and `turn.stop` still reaps a provider that never stops. - `AcpxProviderSession::deliver_tool_result`: a board Stop can land while a semantic tool runs. The session's own `turn.cancel` then retires the call in the sidecar before its result arrives, and the turn terminal may still be buffered. The sidecar rejects the result as stale (`ACPX_TOOL_CALL_STALE`). When this session sent `turn.cancel` for that turn, the Runner now keeps the durable result, like a result for an already closed turn. Every other rejection still fails closed. (`AcpxSidecarTransport::request_tool_resolve` reports whether a rejection was the stale-call case.) - A repeated interruption while a cancel is unanswered sends nothing and returns at once (review finding). - `fake-acpx-sidecar`: new `--cancel-reply lost|late` flag. After that cancel, `tool.resolve` is rejected as stale. The provider ends the turn, and the reply is dropped or written just before the next request. - Three regression tests (below) and a short section in `packages/paperclip-runner/docs/durable-recovery.md`. No TypeScript, server, schema or protocol change. The normal start path is unchanged; nothing waits before turn start. ## Verification Red/green (red runs used the master versions of `acpx_provider_session.rs` and `acpx_sidecar_transport.rs`): - `cargo test -p paperclip-runner-core --test acpx_warm_attachment a_lost_cancellation_reply_still_settles_the_turn_and_suspends_the_runner` - Red: after 30.4 s, `ACPX turn interrupt failed: ACPX sidecar request timed out at turn.cancel` (the live error). - Green: `turn.interrupt` returns in about 5 s, then `turn.interrupted` and a `cancelled` `run.terminal` (no `turn.failed`), `turn.stop`, and `runner.suspend` completes. - `cargo test -p paperclip-runner-core --test acpx_provider_turns lost_cancellation_reply_keeps_the_turn_terminal_and_the_transport` - Red: `interrupt_turn` fails at the request bound. - Green, for a lost reply and for a late reply: the terminal is polled, warm reuse is refused, and the next request (`session.close`) succeeds after the late reply arrives. A late reply causes no second settle and no second prompt. - `cargo test -p paperclip-runner-core --test acpx_provider_turns a_tool_result_for_a_call_retired_by_our_cancellation_does_not_fail_the_transport` - Red (guard disabled): `ACPX sidecar command tool.resolve was rejected (retryable=false, classification=provider_tool_call_retired)`, the same error as live wave task t03 below. - Green: the result is kept, the pending tool clears, and the turn terminal is polled after it. - `cargo test -p paperclip-runner-core` (whole crate): all pass. Existing `turns-tool-resolution-rejected` coverage still fails closed when no cancel was sent. `cargo fmt --check` passes. - Pack contract digest: unchanged (`sha256:3164357d…` before and after, from `scripts/contracts/contract-fingerprints.mjs`). - Live wave 1, `w-20261110T072706-s211` (commit `d91bff1e9f`, the first fix only), `--adapters claude --workloads Q1,S1 --faults PV2 --provider-fault-message interrupt_ack --tasks 4`: 3 of 4 pass. Both Q1 tasks pass (the asking run `succeeded`, no failed run, answer in the brief). One S1 passes. S1 task t03 failed: Stop landed during a `write_task_document` call and hit the stale tool-result error above. The second commit fixes that case. - Live wave 2, `w-20261110T082702-s212` on head `76dd57515d`, same flags: every task passes R1–R6 and U1. Both Q1 tasks pass with the fault applied (asking run `succeeded`, no failed run). S1 t01 passes with the fault applied (Stop took effect, task `done`, no Retry). S1 t03 fails only `provider_fault_applied` (`applied=0`): the agent finished before the Stop window, so nothing was injected and the task proves nothing either way. - Live wave 3, `w-20261110T091057-s213` on head `76dd57515d`, same flags: the same result. t01 (S1), t02 and t04 (Q1) pass with the fault applied; t01's Stop took effect (`status=cancelled`), task `done`, no Retry. t03 again fails only `provider_fault_applied` (`applied=0`, the run finished before the Stop window); all its R1–R6 and U checks pass. - Across waves 2 and 3 on the final head: 6 of 6 tasks with the fault applied pass (4 Q1, 2 S1). No product rule failed. The two misses are harness timing (no injection), not product failures. ## Risks - A healthy cancel reply that takes longer than 5 s now retires the warm runtime. The next turn starts a fresh provider process for that session. The observed healthy reply time is about 1 s. - If the provider never stops and the reply is lost, the turn stays active until `turn.stop` terminates the provider and proves the lifetime fence. If that proof fails, the existing settlement-pending and quarantine states are unchanged; this PR adds no success path without proof. - Runner binary change: hosted Daytona images need a normal image rebuild to pick up the fix. The pack `contractDigest` does not change, so existing image packs stay reusable. ## Model Used - Anthropic Claude, model ID `claude-opus-5-5`, used through Claude Code with tool use (shell, file edit, code execution). ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude <noreply@anthropic.com> |
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DottaandClaude
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82abb3ea04 |
fix(native): classify a Codex API-key unknown model as a model rejection (#20488)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work
> - Native runner agents run on a provider (here Codex) with a model the
user saves on the agent
> - When the provider rejects that model, Paperclip should classify the
run as `native_provider_model_rejected`, ask the user to choose a model,
and let Retry finish the task
> - Paperclip recognized only the ChatGPT-account rejection (a 400 JSON
envelope). With API-key auth, Codex returns a different terminal error
for an unknown model
> - So the run failed as a generic `adapter_failed` ("Native session
failed"), and recovery opened a reconciliation incident ("Recovery
needed") for a turn that never did any work
> - This pull request recognizes the real API-key shape, bound to the
configured model, and names the rejected model on the task
> - The benefit is that the task asks for a model choice instead of a
reconciliation, and Retry completes the task after the user picks a
valid model
## Linked Issues or Issue Description
**What happened?**
The restart-chaos config fault CF3 `model_id` saves a Codex agent with
the model `chaos-missing-model-<nonce>`. The run stays "running" for
about 60 seconds, then fails with `errorCode: adapter_failed`, "Native
session failed". The task shows "Recovery needed", cause
`native_continuation_requires_reconciliation`. The grader fails as
`CF3/model_id:actionable_message` (waves `w-20261110T061914-s206-cf` t01
and `w-20261110T053831-s205-cf` t02).
Root cause: the wave runs Codex with an OpenAI API key. I drove the
bundled `codex app-server` (0.160.0) directly with an unknown model:
- With API-key auth, Codex retries the Responses API 404 ten times
(about 59 s), then fails the turn with `{"message":"unexpected status
404 Not Found: The model \`<id>\` does not exist or you do not have
access to it., url: https://api.openai.com/v1/responses, cf-ray: …,
request id:
req_…","codexErrorInfo":{"httpConnectionFailed":{"httpStatusCode":404}}}`.
- With ChatGPT auth, the turn fails in about 3 s with `message` =
`{"type":"error","status":400,"error":{"type":"invalid_request_error","message":"The
'<id>' model is not supported when using Codex with a ChatGPT
account.","code":"model_not_found"}}`. Paperclip already classified this
one.
`createNativeProviderFailureObservation` parsed only the JSON envelope,
and the runner's provider-failure category for an HTTP 404 is `unknown`.
The terminal therefore stayed unclassified.
**Expected behavior**
The run is `native_provider_model_rejected`, the task shows `userAction:
"choose_model"` and names the model, no reconciliation incident opens,
and Retry completes the task after the user picks a valid model.
**Steps to reproduce**
`node cli/node_modules/tsx/dist/cli.mjs
tests/restart-chaos/config-wave.ts --faults CF3 --adapters codex
--references model_id --tasks 1 --concurrency 1 --restarts K2 --seed
206` on `master` (with `OPENAI_API_KEY` set).
**Paperclip version or commit**
`master` at
|
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DottaandClaude
|
a14ae9b5c9 |
fix(workspaces): name a failed workspace setup command on the task page (#20478)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Before an agent starts, Paperclip prepares the task workspace and runs the project's configured setup commands (for example the workspace provision command) > - When that command fails, the run fails as `setup_failed`, and the task stops with a Retry > - The task page shows only "Failed" and a generic recovery notice. The real error (the command, its exit status and output) is visible only on the run page > - The user cannot see from the task which setting is broken or what to change > - This pull request records a bounded, named cause for a failed setup command and shows it on the task page > - The benefit is that the task names the broken setting and what to change, and classification, retry and recovery stay the same ## Linked Issues or Issue Description **What happened?** The restart-chaos config fault wave CF1 sets a project `workspaceStrategy.provisionCommand` to `bash ./scripts/provision-worktree.sh`, a script that does not exist. The run fails as `setup_failed` with `Execution workspace provision command "bash ./scripts/provision-worktree.sh" failed: bash: ./scripts/provision-worktree.sh: No such file or directory`. The task page shows "Failed" and "Paperclip automatically retried continuation … still has no live execution path". The grader fails the task as `CF1/provision_command:message_only_in_run_detail`. **Expected behavior** The task page names the failed setup step, the configured command, its exit status and a short tail of its output, and says what to change. Retry behavior stays the same. **Steps to reproduce** `node cli/node_modules/tsx/dist/cli.mjs tests/restart-chaos/config-wave.ts --faults CF1 --adapters codex --tasks 2 --concurrency 2 --restarts K1,K2 --seed 204` on `master`. **Paperclip version or commit** `master` at |
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DottaandClaude
|
3e572475c8 |
fix(native): re-attach an answer run whose run.attach a restart cut off (#20477)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - When a person answers an agent's saved question, Paperclip starts an answer run. For a per-turn session, that run starts a new runner and sends `run.attach` to bind the saved conversation to the run > - The runner journals each command before its effect. A restart that kills it inside that window leaves `run.attach` with an unknown outcome. The restored runner settles it as `execution_indeterminate` and never executes it again > - The controller's same-run resume waited on that old command, so every resume failed with "PRP command run.attach failed". The answer never reached the agent. A Retry or a stall followed > - A kill during the attachment's provider launch can also leave a startup fence that no later runner retires, so every later command fails with "provider startup ownership remains unadmitted" > - This pull request attaches again with a new command when nothing after the cut-off attachment started provider work. It also lets the runner retire that orphaned startup fence > - The benefit is that an answer given just before a restart continues on its own ## Linked Issues or Issue Description **What happened?** Local restart-chaos journey wave `w-20261110T054406-s108` on master `2c2186706e`. Command: `--adapters codex --workloads Q1,Q2 --faults K1 --triggers answered --tasks 4 --concurrency 2 --seed 108`. Result: 1 of 4 passed. - t02 (Q1, K1 2.7 s after the answer). Answer run `0b357a1f` resumed after the restart. Each resume failed with `native_session_recovery_failed: PRP command run.attach failed: execution_indeterminate`. Then "Automatic recovery stopped", and the task needed a Retry. - t01 (Q2, K1 1.1 s after the answer). Answer run `82c60af9` failed the same way on three same-run resumes. Its provider state kept `lifecycle: "prepared"` with a `spawned` startup attempt for `run.attach`, and that provider process was gone. Each later drain and suspend failed with "provider startup ownership remains unadmitted". The successor run then refused with `retirement_refused=journal_commands_unsettled(run.attach.failed)`. The accepted Retry created no run (`retry_no_new_run`). The earlier wave `w-20261110T033426-s108` hit the same window at different points. It showed `authority_indeterminate` (Q1) and an ambiguous `turn.start` stall (Q2). See Risks for what this pull request does not cover. **Expected behavior** An answer run that a restart interrupts before it starts provider work resumes by itself. It does not need a Retry. **Steps to reproduce** 1. Run the wave command above on master. 2. Or run `pnpm --filter @paperclipai/paperclip-runner exec vitest run src/live/runnerd-codex-transport-cut-attach.test.ts` on master. Both cases fail with the error from the wave. ## What Changed - `runnerd-codex-transport.ts`: the same-run resume waits on the recovered `run.attach` as before. If that wait fails, the new `cutOffRunAttachmentPayload` checks the journal. It queues one new `run.attach` with the same payload, and waits on it, only when all of these are true: - the latest `run.attach` has an unknown outcome (`indeterminate`, or `failed` with `execution_indeterminate`); - it is a cold attachment (no `paperclipNextAuthority`), with no warm transition and no staged attachment; - every later command is recovery maintenance, as the control plane's shared `isRunnerRecoveryMaintenanceCommand` defines it (`session.snapshot`, `session.goal.get`, `runner.drain`, `runner.suspend`, `runner.shutdown`, `turn.stop`); - no committed event shows provider work (`turn.accepted`, `turn.started`, `item.started`, `tool.execution.started`, `semantic_tool.input`, `runtime_request.created` or `mcp_app.tool_input`). Any other failure is thrown unchanged. - `provider_backend.rs` (Runner): `retire_orphaned_startup_attempt` also treats a `prepared` state with a saved thread and a nonzero process generation as restorable. `attach_run` already documents this state as the settled checkpoint that `run.attach` restores. The other fence rules do not change. The fence is retired only before the spawn, or when the recorded process and its group have exited. - Tests: - New real-runnerd test `runnerd-codex-transport-cut-attach.test.ts`. A real runner and the fake Codex server run an asking run, then a cold answer-run attachment. The test kills both processes and rewinds both journals to "`run.attach` journaled, outcome not recorded", then resumes. One case has a startup fence and one does not. - A unit test for `cutOffRunAttachmentPayload`. It covers each maintenance command, and the cases where it must not re-attach (a definite answer, a pending command, a warm or staged attachment, any work command, a turn event). - The Rust orphaned-startup test also covers `prepared`. A new test shows that a `prepared` state with no saved thread keeps its fence. - `docs/durable-recovery.md`: describes both behaviors. ## Verification - Red/green, real runnerd: - On master, `runnerd-codex-transport-cut-attach.test.ts` fails both cases with `PRP command run.attach failed: ... execution_indeterminate`, the error from the wave. - With only the transport change, the case without a fence passes. The fence case fails with `provider startup ownership remains unadmitted`, the t01 error. - With both changes, both cases pass. - Red/green, Rust: `cargo test -p paperclip-runner-core --lib orphaned` fails `restart_retires_a_spawned_startup_whose_provider_process_exited` for `prepared` without the runner change. With it, all 10 tests pass. - Related transport suites, 8 files and 387 tests, pass: `runnerd-codex-transport`, `-attachment-recovery`, `-cold-restore`, `-warm-attachment`, `-release-resume`, `-cut-attach`, `runnerd-restart-continuation` and `runnerd-saved-continuation`. `tsc --noEmit` for the Runner package passes. - Live proof: the same wave command on this branch. Results follow in a comment. **No duplicate provider work.** The new attachment is sent only when the journal proves that no provider work followed the cut-off one. No command after it can start or steer work: only the shared recovery-maintenance commands are allowed, and none of them starts a turn. No turn, item, tool-input or runtime-request event is committed. `run.attach` itself starts no turn. In the Codex and ACPX runners, `attach_run` refuses to attach unless the session is settled. That means no active or ambiguous turn, no pending tool call and no live active goal. The old command is never executed again, because the runner refuses an `indeterminate` command. The new attachment is a new command with a new ID. ## Risks - Low-medium risk. The new path runs only after a same-run resume has already failed on an unknown-outcome attachment. Before this change, that run could not continue. - If an attachment's partial effect had changed provider state, the runner's own settled-session check refuses the new attachment. The run then fails as it does today. - **Runner release:** the Runner change does not change the pack `contractDigest`. It is `sha256:3164357d…` before and after (`scripts/contracts/contract-fingerprints.mjs`). Local runners use the runnerd built with the app, so the fix takes effect with this release. A remote image pack (for example Daytona) that was built before this change keeps the old fence rule until a new image or pack is built and qualified. No release or pin bump is part of this pull request. - **Mixed versions during an upgrade:** - New server with an old runner: the server re-attaches. A run without a startup fence continues. With a fence, the old runner refuses the new attachment, the same failure as today. - Old server with a new runner: the runner retires the fence, but the old server still fails on the unknown-outcome attachment, as today. - Neither mix adds a new failure. Saved state from older builds needs no migration. - Not covered here, and still open: - A `turn.start` with an unknown outcome where the resumed thread has no active turn (wave `w-20261110T033426-s108` t03). The runner deliberately fails closed for that case. - A warm-runner attachment that may already have been delivered (`authority_indeterminate`). - A Retry that waits on `process_identity_missing` for a run that failed before any process started. A separate pull request will cover it. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), via Claude Code with tool use (shell, file edits, test execution). ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Refs #20146, #19784, #20148 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude <noreply@anthropic.com> |
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DottaandClaude
|
ca472d543a |
fix(runner): settle a saved governed wait whose shutdown drain left sequence gaps (#20494)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - A native agent run can ask the board a question and park on that saved (governed) wait > - After the question is saved, the runner interrupts the provider and drains its usage and terminal for a bounded time > - The drain keeps only usage, the terminal and cancellation facts of the parked turn. It discards every other numbered provider event > - If the control plane restarts before the drain settles, recovery replays the saved journal. That replay required strictly contiguous `sourceSeq`, so the discarded events made a valid saved wait look like the wrong conversation > - This pull request accepts a gap after the saved trigger only when every event after the gap is a drain-retained fact of the same turn. Identity checks do not change > - The benefit is that the asking run settles its saved wait after a restart instead of recording a failure ## Linked Issues or Issue Description **What happened?** Restart-chaos wave `w-20261110T063253-s208`, tasks t02 (Codex Q1, PV2: provider terminal dropped) and t03 (Codex Q1, PV1: provider terminal held), each with K1 (`kill -9` of the control plane about 3-4 s after the fault). The question, the board answer and the final brief were all correct. But the asking run was recorded `failed: native_session_interrupted`, and the grader failed `T:asking_run_settled`. **Cause** The run log of the asking run shows `failureDetail.message: native_governed_wait_replay_mismatch`. It is thrown at `packages/paperclip-runner/src/native-session-runtime.ts:2344` (master). The persisted runner events of the asking run have `sourceSeq` 33..40 and then 43 (t02), and 41, 42 and then 45 (t03). The two missing numbers are events that the accounting drain (`consumeTurn` → `settleDurableResult`, around line 1206 on master) read and discarded, because they are not usage, a terminal or a cancellation fact. Runs without a restart have the same gap (for example `w-20261110T032350-s201/t01`: 34, then 37). Those runs settle without replay, so the gap was not seen before. With a held or dropped terminal and a kill before the shutdown settlement receipt, recovery must replay. Its strict contiguity check then fails on a gap that the runner made itself. **Expected behavior** The question was saved before the provider was interrupted. Recovery must settle that same saved wait, as #20336 does after verified shutdown. Recovery must not start a new model turn. **Related** Refs #20336 (settle saved handoffs after verified shutdown). Not related in cause or code: #20477, #20482, #20483. ## What Changed - `isGovernedDrainRetainedEvent` (new, in `native-session-runtime.ts`) names the facts that the governed-wait drain persists: usage, the turn terminal, the interrupt acknowledgement, cancelled or expired runtime requests, and a failed or cancelled `run.terminal`, all for the parked turn. The drain now uses it in place of the same inline condition. Drain behavior does not change. - Governed-wait recovery replay accepts a `sourceSeq` gap only when: - the trigger is the first replayed event (a gap before it still fails), - sequence numbers strictly increase, - every event after the first gap is a drain-retained fact of the trigger's turn. - The run, normalized session and source instance identity checks do not change. Any mismatch still fails with `native_governed_wait_replay_mismatch`. - `doc/execution-semantics.md`: the governed-wait text said that shutdown keeps a contiguous journal. It now describes the gaps and the replay rule. Note for the sibling Claude/ACPX `turn.cancel` work: this change touches `settleDurableResult` only in the drain filter line (same condition, shared helper). It does not change cancel, the drain timeout or `settleCancelledTurn`. ## Verification - Red/green: `packages/paperclip-runner/src/native-session-runtime.test.ts` - `settles a saved governed wait whose drain left sequence gaps before a restart (terminal-after-restart)` - `settles a saved governed wait whose drain left sequence gaps before a restart (late-terminal-saved)` The first run uses the real drain. It discards two numbered events, so the history is trigger, acknowledgement, then usage with a gap. The stream then ends without a terminal, as with PV1/PV2 plus K1. On master, recovery rejects with `native_governed_wait_replay_mismatch` (the live error). With this change, recovery settles the saved wait as yielded. It does not call `resolveGovernedWait` again. It starts no second turn. The terminal is appended once. When the terminal arrived late and is already saved, recovery does not cancel the provider again. A further recovery of the settled checkpoint does not submit or settle again. - Fail closed: `keeps rejecting an unproven governed-wait replay with a sequence gap: …` covers a gap before the trigger, a foreign run, a foreign session, a foreign source instance, usage of another turn, a non-accounting event after a gap, and an accounting event followed by a non-accounting event. - `cd packages/paperclip-runner && npx vitest run src/native-session-runtime.test.ts`: 261 passed. `npx tsc --noEmit -p .`: clean. - `cd server && npx vitest run src/services/native-runtime/native-session-executor.test.ts -t governed`: 12 passed. - `pnpm verify` returned exit 2 (test file outside resolved graphs). Required CI supplies the broad coverage. - Live restart-chaos wave: see the comment below with the wave id and result. ## Risks - Low. The rule loosens only the sequence check, and only after the saved trigger, and only for facts that the drain itself retains and that carry no work authority. Identity checks stay strict. A non-accounting event after a gap still fails closed. - No change to the normal start path or turn startup (fast-turn rule). - No schema, protocol or env change. The pack `contractDigest` and provider `commandDigest` do not change. No Daytona image rebuild is necessary. ## Model Used - Anthropic Claude, model ID `claude-opus-5-5`, used through Claude Code with tool use (shell, file edits, test runs). ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude <noreply@anthropic.com> |
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DottaandClaude
|
1e13c58a4e |
fix(heartbeat): name the cause of generic adapter failures and keep SQL text off the board (#20483)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Heartbeat run settlement records why a run failed, and the board shows that record. > - Runs that fail without a named code settle as `adapter_failed` (or `setup_failed`) with no cause. > - A user, an operator, and the restart chaos harness cannot tell what went wrong from such a run. > - Some run errors also show raw SQL statement text to users. > - This pull request records a bounded `failureCause` code for generic failures, shows it on the board, and keeps SQL text out of run errors. > - The benefit is that a generic failure now names its cause, for example "adapter failed (40001)", without leaking messages, SQL, or secrets. ## Linked Issues or Issue Description Refs #20385 (the nested-cause extraction this change reuses). Related: #20421 (restart chaos universal checks U1-U4). **What happened?** The restart chaos audit of 79 saved waves found 30 failed runs with `errorCode: "adapter_failed"` and a null or generic error. Every U3 ("diagnosable") warning was `adapter_failed`. Nobody could tell what failed. Some board run errors also showed raw SQL statement text from wrapped database errors (Drizzle `Failed query: ... params: ...`). **Expected behavior** A run that fails with a generic code names a short, safe cause. The board shows the cause next to the stop reason. Run error text never shows SQL statements or their parameters. **Steps to reproduce** Make an adapter throw a wrapped database error (an `Error` whose nested `cause` has `code: "40001"` and whose message has a Drizzle `Failed query:` statement). Before this change, the run settles as `adapter_failed` with no cause, and `heartbeat_runs.error` contains the SQL statement and parameters. The new tests in `server/src/services/heartbeat/run-completion.test.ts` reproduce this. ## What Changed - Runner: move the #20385 event-commit cause extraction into `safeErrorCauseCode` (`packages/paperclip-runner/src/control-plane/safe-error-cause.ts`) and export it. The Runner's own diagnostics use the same function, unchanged in behavior. - Shared: add the `failureCause` contract (`packages/shared/src/run-failure-cause.ts`): one `[A-Za-z0-9_.:-]` token of at most 80 characters, `normalizeRunFailureCause`, `readRunFailureCause`, and `withoutSqlStatementText`. - Server: add `server/src/services/heartbeat/run-failure-cause.ts`. Settlement records `resultJson.failureCause` only when the code is generic (`adapter_failed`, `setup_failed`). `errorCode` stays the same. - Thrown errors (`failRun`, `failRunSetup`): `provider_http_<status>`, else `provider_<category>`, else the first safe code in the error and up to three nested causes (`40001`, `ECONNRESET`), else the error class name, else `unknown_error`. - Adapter results without a code (`completeRun`): the error family, `signal_<name>`, `process_cancellation_failed`, `exit_code_<n>`, `adapter_reported_error`, or `unknown_error`. - The failure log lines (`heartbeat execution failed`, `heartbeat execution setup failed`, and a new `heartbeat run failed` warning for generic adapter results) include `failureCause` and `errorCode`. - Server: replace SQL statement text in run error text with "Database query failed (<cause>)" at all three settlement paths, including the cancelled branch. The execution blocker's `runError`, the attention inbox (failed-run excerpt and metadata), and continuation summaries apply the same replacement on read, so older rows also stop showing SQL there. - Server: Retry admission and failed-preparation replay accept only a closed set of `resultJson` keys. `failureCause` is added to each of those lists (`task-retry.ts`, `chat-channels/failed-run-retry.ts`, `cancelled-native-startup.ts`, `fresh-workspace-continuation.ts`). It is a diagnostic code with no execution or replay authority, so a failed-preparation run stays retryable. - Server: `runsForIssue` returns a validated top-level `failureCause`. It is null for older rows, non-string JSON values, and malformed values. - UI: `RunForIssue.failureCause`; `IssueRunLedger` shows "adapter failed (40001)". Older runs keep "adapter failed". The Storybook run-ledger fixture has a failed run with a cause. - Restart chaos harness: run samples keep `failureCause`. U3 treats a generic code with a specific `failureCause` as diagnosable. A bare `Error`, `unknown_error`, or the no-code fallback `adapter_reported_error` still counts as vague. U3 stays a warning. - Docs: `doc/run-log-events.md` and the harness README describe the field and the SQL replacement. ## Verification - Red before the fix: the four new `run-completion.test.ts` cases failed against `origin/master`'s `run-completion.ts` (no `failureCause`, SQL text in `error`). - Green: - `server/src/services/heartbeat/run-completion.test.ts`: all tests passed (real embedded PostgreSQL). New cases cover a nested `40001` three levels deep for execution and setup failures, SQL and a secret parameter absent from `error` and `resultJson`, the bound (an 81-character code and a SQL "code" fall back to the class name), `exit_code_137` for a code-less adapter result, a cancelled result with SQL text, no cause for a named code, and the log line. On this loaded host the suite's `afterAll` database teardown hit its 30 s hook limit after every test passed (the known local teardown limit, also seen in #20385). CI runs the suite. - `server/src/services/heartbeat/run-failure-cause.test.ts` (4), `server/src/__tests__/activity-service.test.ts` (recorded, legacy, malformed, overlong, boolean, and number cause projections), `server/src/__tests__/issue-continuation-summary.test.ts` (legacy SQL row). - `packages/shared/src/run-failure-cause.test.ts` (6), `ui/src/components/IssueRunLedger.test.tsx` (21), restart chaos `universal.test.ts` and `observer.test.ts`. - `packages/paperclip-runner/src/control-plane/durable-prp-control-plane.test.ts`: 207 passed (the stall-diagnostic cases still read `40001` and `ECONNRESET`). - Typecheck: shared, runner, server (all layers), UI, restart chaos harness. `pnpm check:token-gates`: all gates clean. - `pnpm verify` returned exit 2 (global doc input changed); required CI supplies broad coverage. - CI on `6295f8d` found that the new key made failed-preparation runs ineligible for Retry (`chat-channels.integration.test.ts` saved board-message Retry got 409; `workspace-recovery-preparation-dispatch.test.ts` dispatched 0 Retries). Both reproduced locally and pass after the allowlist fix, with the other 459 Retry cases in `chat-channels.integration.test.ts` and all 25 in `workspace-recovery-preparation-dispatch.test.ts`. - No chaos waves were run. Storybook was not opened in a browser; the fixture typechecks and the label is covered by the UI test. ## Risks - Low risk. `errorCode` values do not change, so retry, recovery, and comparison logic is unaffected. - No schema change and no migration. `failureCause` is a new optional `resultJson` key. Rows saved by the previous release have no key and render as before; a new row read by an old server is ignored. - The SQL replacement only acts on a Drizzle `Failed query:` marker, or on `$n` placeholder text with a statement shape. Ordinary error text does not change. When it acts, it also drops the text after the statement. - Code that checks `resultJson` against a closed key list must allow `failureCause`. I found and updated the four lists on the Retry path; a list I missed would refuse a Retry for a run with a generic failure. - This is the run log / instance database path. It adds no Telemetry event. - The server failure log line still logs the raw error message (unchanged behavior); only the board-facing text is changed. ## Model Used - Claude Opus 5.5 (Anthropic), model ID `claude-opus-5-5`, used through Claude Code with tool use (shell, file editing) and code execution for tests. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude <noreply@anthropic.com> |
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Nicky Leach
|
8809f44b5e | Connect Codex and Claude login to agent computers (#20417) | ||
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Devin FoleyandPaperclip
|
549ca46dae |
fix(runner): retain Claude GitHub broker settings through the Rust sidecar (#20463)
## Thinking Path > - Paperclip lets people manage AI agents for work. > - Shared agents use the instructing person's GitHub identity for managed commands. > - Native Claude starts through the Rust daemon and a TypeScript ACPX sidecar. > - The Rust launch filter kept the command launchers but removed their broker transport. > - Shell commands then reported `GitHub capability_missing`, although connector tools worked. > - This pull request retains that transport for managed Claude launches. > - Each command can acquire its current identity through the existing broker checks. ## Linked Issues or Issue Description **What happened?** Native Claude could use GitHub connector tools but could not authenticate `git` or `gh`. The Rust daemon removed the broker URL and session/bridge capabilities before starting the ACPX sidecar. Reconnecting the account did not repair this process environment. **Expected behavior** Managed shell commands use the current authorized GitHub identity. The provider receives broker capabilities, while raw GitHub tokens remain confined to individual commands. **Steps to reproduce** 1. Start native Claude through the Rust Runner with managed GitHub launchers. 2. Run `gh api user` and a private repository ref lookup through Bash. 3. Observe `capability_missing` and no request to the broker. **Paperclip version or commit** Reproduced from source at `2c2186706ef4bb352b662f9d8faebefe47fb52ac`. The repair is based on `a5e01634f69f18dfe10a0bf709df02d9e6a2135b`. **Deployment mode** Native Claude through ACPX. Local acceptance used macOS arm64 and Node 25.6.1. The reported failure also affected a Linux sandbox. Related: #18212 preserved launcher paths. #18850 repaired the TypeScript filter. This change repairs the preceding Rust filter. The duplicate search found no open repair for this boundary. ROADMAP.md already lists managed personal GitHub identities. ## What Changed - Retain the broker URL and both broker capabilities when Claude has a nonempty managed launcher directory. - Keep raw GitHub tokens, unrelated secrets, empty launcher configurations, and sibling ACPX providers outside that exception. - Exercise the regression through the public sidecar initialize protocol in the existing Rust integration suite. Document the restart requirement. The Rust sidecar transport owns this filter. Credential resolution, company access, approval, and run identity policies keep their existing owners. No schema or API changes are needed. ## Verification - Red/green: the subprocess regression failed on the missing `PAPERCLIP_GITHUB_BROKER_URL` before the fix, then passed with all three broker settings and the negative controls. - Passed before moving the regression: 615 Rust core tests, with 3 existing ignored tests. After moving it into the integration suite, all 20 sidecar integration tests and the 9 remaining sidecar unit controls pass. The moved regression was also run against the unfixed source and failed on the missing broker URL. - Passed: 85 TypeScript environment, launcher, sandbox, and configured-environment controls. These include operation identity changes, revocation, recovery, and exclusion of capabilities from persisted environment data. - Passed: Runner Rust typecheck and format check, plus the Runner build through `node scripts/agent-preflight.mjs --skip-rust-debug`. - Live before/after: real `claude-opus-5-5` through the actual Rust daemon and built ACPX sidecar reproduced the failure with the old binary. Neither shell command reached the broker. With the fixed binary, `gh` identified the connected account and `git` read private repository refs. A second turn retained a workspace file and authenticated again. After the controlled broker denied access, the next command failed without reusing the prior token. No GitHub writes were made. - Live release cutover: saved a session with the unfixed daemon, suspended it, and restored it with the repaired daemon on `aa9f5b30614c011ebc3fe4509e11173b766c1fea`. The same session and workspace marker survived. `gh` authenticated after restoration, then failed when the controlled broker revoked access. - Live acceptance used an Anthropic API credential and a loopback broker with an authorized operator GitHub credential. This isolates the repaired transport; it does not qualify the hosted subscription credential or production grant resolver. - The first PR review gate did not recognize the in-source Rust test. The regression now lives in the existing integration test file, and the same test-coverage gate passes locally. - `pnpm verify` returned its documented exit 2 and required broad CI coverage. The final head passed the full CI typecheck, build, and test lanes. - Greptile reviewed `64cca69b76073cc3185b28334465dee48fbadb29` at 5/5 with no actionable findings or open review threads. Its check passed on that head. The same head is mergeable with no conflicts. - Final head `64cca69b76073cc3185b28334465dee48fbadb29` passed [full PR CI](https://github.com/paperclipai/paperclip/actions/runs/42761401396), [Windows Rust](https://github.com/paperclipai/paperclip/actions/runs/42761401117), and [isolated Runner compilation](https://github.com/paperclipai/paperclip/actions/runs/42761400973). Typecheck, build, all test shards, Runner checks, browser checks, and aggregate verification passed. No checks are pending or failed; five conditional jobs were skipped. ## Risks - The Claude sidecar now receives the intended broker capabilities. The existing broker must continue to enforce active-run identity and current connection access. Raw GitHub tokens remain excluded from the provider launch environment. - Previous-release checkpoint and profile formats carry forward unchanged. A running provider must retire and restart normally to inherit the repaired environment. No profile reset or data migration is required. - Hosted recovery requires delivery of the updated Runner binary. This PR does not deploy or retry existing tasks. Live acceptance has not exercised Linux sandbox confinement or a GitHub write. ## Model Used OpenAI `gpt-6.1-sol` through Codex, with xhigh reasoning. Used repository inspection, code editing, and shell execution. The context window size is not exposed. Anthropic `claude-opus-5-5` was exercised as the acceptance-test provider. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
|
5bad074baa |
feat: add individual agent interaction permissions (#20411)
Add eleven sparse incoming and outgoing restrictions, human CLI/API administration, shared mutation enforcement, and pending-delivery checks. Preserve existing defaults, agent settings, and existing authorization boundaries. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandClaude Opus 5.5
|
ff4ba7d319 |
perf(runner): run launch artifacts in place from a trusted read-only root (#20428)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The Rust Runner (`paperclip-runnerd`) starts provider sidecars and proxies from qualified launch artifacts: a Node runtime and the scripts it runs > - Since #12699, Runner copies each artifact into a sealed memfd and checks its SHA-256 on every verification. This defends against a path swap or an in-place rewrite between the check and the exec > - On a hosted agent computer (4 vCPU), the copy and digest of the 127 MB Node takes about 0.26–0.30 s warm and about 1.2 s right after a wake. This is on the path from `session.open` to the sidecar spawn, and again on every warm `run.attach`. Each Runner also holds about 125 MiB of shmem for the copy > - On that computer, the artifacts live on the Runner ROM: a read-only erofs image that the deploy pins by digest. The threat that the memfd defends against does not exist there. On local hosts the artifacts are writable, so the memfd must stay > - This pull request adds an explicit, path-scoped, default-off `--trusted-launch-root <dir>`. Runner runs an artifact in place only when its open descriptor proves that it is on an immutable mount under that root. Everything else keeps the sealed, hashed snapshot > - The benefit is a shorter `session.open` and `run.attach` on agent computers, and about 125 MiB less shmem per Runner, with no change where the flag is absent ## Linked Issues or Issue Description **What existing behavior does this improve?** Launch-artifact verification in `paperclip-runnerd` (`qualified_launch.rs`). Its callers are the ACPX `verified_transport` (every `session_config`, including the park rebind) and the OpenCode and Cursor Cloud proxy launches. **Subsystem affected** Rust Runner (`packages/paperclip-runner/runner/crates/runner-core`). **Current behavior** Every verification opens the artifact, copies all bytes into a sealed memfd, and hashes them. Node is 127 MB. The cost is described in the Thinking Path. **Proposed behavior** When the host passes `--trusted-launch-root /opt/paperclip/runner` and the root passes its checks, Runner holds each admitted artifact open in place and executes it through `/proc/self/fd/N`. It does not copy or re-hash it. Without the flag, nothing changes. **Reason and benefit** See the Thinking Path. Refs #12699 (introduced the sealed memfd). Refs #20423 (overlap, see below). ## What Changed - `qualified_launch.rs`: new `TrustedLaunchRoot` and `set_trusted_launch_root` (process-global, set once at startup, like `--task-memory-cgroup`). - **Root checks at startup.** The path must be absolute, already canonical (no symlink or `..`), a directory, and on a read-only, exec-permitted erofs or squashfs mount. If a check fails, runnerd logs a warning and keeps today's behavior. - **Per-artifact checks, on the open descriptor.** After today's checks (regular file, not a symlink, not group- or world-writable, open-time identity), the descriptor must be a regular file on the root's device. Its kernel path (`readlink /proc/self/fd/N`) must lie under the root by path components, so `/opt/paperclip/runner2` does not match. Its mount must pass `fstatvfs` (`ST_RDONLY` set, `ST_NOEXEC` clear) and `fstatfs` (erofs or squashfs magic). If any check fails, Runner logs the reason and uses the sealed snapshot. - **Admitted artifacts** become `VerifiedProcessArtifact::in_place_on_trusted_root` (crate-private). The held file goes through the existing `inherited_artifact` path, so the exec is `/proc/self/fd/N` and `PAPERCLIP_VERIFIED_RUNTIME_EXECUTABLE` still names a descriptor that nested launches can reopen. - New `verify_assigned_executable_launch_artifact` never uses the root. `stdio_mcp.rs` now calls it, so host-assigned stdio MCP binaries always keep the sealed snapshot. - `paperclip-runnerd.rs`: parse `--trusted-launch-root <dir>`. Older runnerd builds ignore unknown flags, so a host can pass it before every Runner understands it. - The trusted path is Linux-only. On macOS and Windows, `TrustedLaunchRoot::open` always refuses. - `tests/runner-e2e/SECURITY.md`: documents how the Kimi and Pi provider-death fixtures behave under a trusted root. ### Decision: the trusted path drops the digest The trusted path does not hash the artifact, not even once per process: - The ROM image is pinned by digest at deploy time. - On the agent computer, the Launcher computes the expected `--acpx-sidecar-command-sha256` and `--acpx-sidecar-script-sha256` from the same ROM files immediately before it starts Runner. A re-hash of an immutable file can only repeat that result. - One hash per process would not help `session.open`, because each task starts a new Runner process. - The mount check is the guard: erofs and squashfs have no write path, so the bytes cannot change while the descriptor is open. ### Fixtures that assert the sealed memfd - Untrusted-mode assertions are unchanged. The fixtures do not pass the flag. - Kimi (`kimi-provider-fault.py` `checked_parent_descriptor`): with a trusted root, the parent descriptor is the ROM's Node file (one link). The existing linked-descriptor branch handles it: same inode as `/proc/<pid>/exe`, and the complete bytes hashed against `nodeSha256`. That branch never accepts the file as a memfd. The existing test `test_linked_descriptor_keeps_regular_single_link_checks_without_memfd_claim` covers it. - Pi provider-death admission binds `/proc/self/fd/3|7` to the native distribution snapshot's Node. The TypeScript ACPX closure copies that file whether or not a trusted root is set, so the flag does not affect it. ### Overlap with #20423 #20423 (draft) moves the same copy and hash to Runner boot and reuses the result. Where this flag is set (Cloud agent computers), there is nothing left to precompute, so #20423 is mostly redundant there. #20423 still helps hosts without a trusted root (local and sandbox Runners). This PR does not change #20423. ## Verification All runs are on Linux (aarch64, Rust 1.97.1, in a container): - `cargo fmt --manifest-path runner/Cargo.toml --all -- --check` - `cargo check --manifest-path runner/Cargo.toml --locked --workspace` - `cargo test -p paperclip-runner-core --lib -- qualified_launch trusted_root commonjs`: 12 passed. The new tests are: - `an_artifact_under_an_immutable_trusted_root_runs_in_place_without_a_digest`: trusted-root hit, with no memfd, the same inode as the source, and no re-hash. - `an_artifact_outside_the_trusted_root_keeps_the_sealed_snapshot`: a path outside the root is sealed, and a wrong digest still fails. - `a_sibling_with_the_root_as_a_name_prefix_is_outside_the_root`: `rom2/` does not match `rom`. - `a_root_that_is_not_read_only_falls_back_to_the_sealed_snapshot`: the real probe refuses a writable root at startup. A per-artifact mount failure falls back, and a wrong digest still fails. - `the_real_mount_probe_rejects_a_writable_filesystem` - `symlink_and_parent_escapes_from_the_root_fall_back`: a directory symlink out of the root, a `..` path out of the root, and a final-component symlink (still refused). - `a_root_must_be_absolute_canonical_and_a_directory` - `without_a_trusted_root_launch_artifacts_are_sealed_and_hashed`: flag absent, behavior unchanged. - `host_assigned_executables_ignore_the_trusted_root` - `trusted_root_artifacts_execute_the_held_file_and_reopen_it_for_nested_launches`: Runner execs from the held file, and a child re-execs `$PAPERCLIP_VERIFIED_RUNTIME_EXECUTABLE`. Both report the source file as `/proc/self/exe`. - `cargo test -p paperclip-runner-core --test stdio_mcp --test process_supervisor`: 4 and 8 passed. - Ad hoc, not committed: a privileged container with a real loop-mounted squashfs. The real `fstatvfs`/`fstatfs` probe admitted a `ro` mount and refused a `ro,noexec` mount. The unit tests replace only that mount probe, because CI cannot mount filesystems. - Not verified: a run on an agent computer with the real erofs ROM, and the latency and memory savings there. The Cloud Launcher change that passes the flag is a separate follow-up. ## Risks - **This change needs review from a security owner before merge.** It removes the sealed copy and the per-launch digest for admitted artifacts. That relies on the host's assertion that the root is a digest-pinned immutable image, plus the descriptor checks above. - **Misconfiguration fails closed.** A wrong, writable, `noexec`, non-canonical or missing root only loses the speedup, and runnerd logs a warning. There is no global "trust everything" switch, and Runner never selects a root from the filesystem it finds. - **Residual trust.** On an admitted file, Runner no longer detects a ROM image that differs from what the launch profile expected. On the agent computer, the Launcher derives the expected digests from the same ROM. Another host that passes the flag must pin its image the same way. An attacker with root in the guest (who could write the backing block device or remount) is out of scope; such an attacker can already control runnerd. - **Allowlist.** Only erofs and squashfs are accepted, because they cannot be written through any mount. A read-only bind mount of a writable filesystem is refused. A ROM that changes to another filesystem type will silently fall back to the sealed path (slower, still safe). - No migration. Behavior is unchanged when the flag is absent. Older runnerd builds ignore the flag. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with tool use (shell, file edits, container builds). Extended reasoning was on. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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Nicky LeachandPaperclip
|
3a5572c9e5 |
Extend login PTY contracts for existing computers (#20410)
## Thinking Path
> - Paperclip manages agent execution across environments.
> - Environment providers own execution resources.
> - Codex and Claude already share the login PTY transport.
> - A login on an existing computer needs its own allocation and
deadline.
> - Input retries must retain their identity.
> - Codex also needs a fixed credential-file read; Claude already
returns its token through PTY output.
> - This change extends the shared contract and keeps both existing
provider parsers.
## Linked Issues or Issue Description
**Problem**
The existing login contract assumes a temporary sandbox. It cannot
describe a login allocation on an existing computer or export its fixed
credential result without generic execution.
**Proposed solution**
Add shared allocation purpose, command identity, PTY deadline, and input
identity fields for both Codex and Claude. Add one optional
credential-result hook for Codex's auth.json file.
**Alternatives considered**
A separate Claude login implementation would duplicate the current
setup-token parser and owner-bound credential writer. Claude continues
to use that existing path. The new artifact hook is Codex-specific
because Claude's setup-token result comes through the existing shared
PTY output stream.
## What Changed
- Export the login contract types from the main SDK entry point.
- Forward login purpose and command through plugin allocation and retain
them in lease metadata.
- Forward the PTY deadline and give each input write a stable identity.
- End a login route when the worker cannot confirm input delivery.
- Preserve the opening company scope for input, stop, and close
callbacks.
- Advertise and dispatch the optional fixed Codex credential-result
hook.
The allocation, deadline, input, output, and cleanup contracts serve
both providers. This PR does not enable either provider on an existing
computer. The dependent consumer PR connects admission, services,
credential completion, and UI for both providers.
## Verification
- Close-ordering regression: all 91 host worker-manager tests passed,
including concurrent close callers waiting behind a held plugin
acknowledgement after input failure. Server TypeScript check passed. All
current CI gates, ordinary review, and the selected follow-up review
pass on
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DottaandClaude Opus 5.5
|
347d85fef3 |
perf(chat): index GitHub review lookups and share review-wait reads (#20400)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - GitHub chat endpoints let agents review pull requests. The server reads review state when it lists issues and when it updates GitHub checks. > - On a hosted instance, two GitHub review queries used the most total database time. One query ran about 660,000 times at about 33 ms. The other query ran about 10,000 times at about 1 s. > - The first query finds a source comment's chat link. No index covers `chat_message_links.comment_id`, so each call reads the full table. Issue lists also read the same review waits two times per request. > - The second query joins deliveries, links and runs on a JSON key. The planner walks the agent's run history in creation order and reads each run's context. > - This pull request adds four concurrent indexes, splits the run lookup into two small reads, and shares review-wait reads in one issue-list request. > - The benefit is less background database load, so request reads wait less. The results stay the same. ## Linked Issues or Issue Description **What existing behavior does this improve?** GitHub review state reads. These are the inherited review-wait lookup by source comment, and the review-check lookup of the run that a delivery's comment woke. **Subsystem affected** Server chat channels (GitHub review waits and checks), issue list attention maps, and the database schema. **Current behavior** - `readInheritedGitHubReviewWait` filters `chat_message_links` by `company_id`, `comment_id` and `direction`. No index has `comment_id`, so PostgreSQL reads the full table on each call. The run-origin check does the same lookup first. - An issue list calls the external review-wait read from the review attention map and again from the blocked-inbox attention map. The two maps read the same in-review issues. - `githubReviewCheckState` joins deliveries, links and runs with `context_snapshot->>'wakeCommentId' = comment_id::text`, sorts by `created_at desc` and takes one row. The planner reads the agent's runs in creation order and reads each run context. If no run matches yet, it reads all of them. The delivery filter on `normalized_event` and the link join on `delivery_id` also have no index. **Proposed behavior** The same rows come back from small index reads. Each issue's review wait is read one time per issue-list request. **Reason and benefit** These two statement families used about 33,000 s of database time in one cumulative statistics window. The database had about 50 concurrent active queries, and request reads waited behind this background work. **Breaking changes** None. The migration adds indexes only. ## What Changed - Migration `0456_chat_review_lookup_indexes` builds four indexes with `CREATE INDEX CONCURRENTLY IF NOT EXISTS`. It runs through the existing top-level statement path, which repairs an invalid index on retry: - `chat_message_links_company_comment_idx` on `(company_id, comment_id)` where `comment_id is not null`. - `chat_message_links_delivery_idx` on `(delivery_id)` where `delivery_id is not null`. - `chat_deliveries_github_automatic_delivery_idx` on `(endpoint_id, normalized_event->'githubAutomatic'->'context'->>'deliveryId')` where that value is not null. - `heartbeat_runs_company_wake_comment_idx` on `(company_id, context_snapshot->>'wakeCommentId')`. This index is not partial. The planner does not use expression statistics from a partial index. Without these statistics, it estimates many matches and keeps the creation-order walk. - `githubReviewCheckState` reads the delivery's comment IDs first. If there is a comment, it reads the newest same-agent run with one of these `wakeCommentId` values. If there is no comment, it skips the run read. The comparison stays text equality on `comment_id::text`. - `createExternalReviewWaitReader` shares one read per issue between the review and blocked-inbox attention maps of one issue-list request. The reader exists only for that request. - `doc/DATABASE.md` describes the indexes and the new read order. - `scripts/benchmark-review-lookup-indexes.ts` compares the pre-fix and new code with and without the indexes. `scripts/benchmark-review-lookup-index-migration.ts` times the migration on a large synthetic database. ## Verification Local SQL measurements on a synthetic fixture. They are not production timings. Environment: embedded PostgreSQL 18.1, baseline revision `02bfe71a6b`. Fixture: 50,000 links, 5,000 deliveries with about 2 KiB events, and 4,000 runs with about 12 KiB incompressible contexts. The wake run is in the middle of the run history. Each value is the median server execution time from `EXPLAIN ANALYZE` (2 warmups, 9 samples). The order was: no indexes, indexes, then no indexes again. | Caller and statement | Before (no indexes, two passes) | After | Shared buffers before → after | | --- | --- | --- | --- | | Inherited review wait, link by source comment (same SQL) | 2.72 / 2.36 ms | 0.076 ms | 929 → 12 | | Review check, wake run found | 31.9 / 21.9 ms | 0.29 ms (two statements) | 25,776 → 62 | | Review check, no wake run yet | 71.0 / 47.5 ms | 0.06 ms (two statements) | 34,861 → 12 | - Indexes alone do not fix the review check. The old SQL with the new indexes took 8.6 ms (run found) and 29.7 ms (no run), because it still walked the run history. The new SQL without the new indexes was neutral (23.5 and 35.1 ms). - Service wall times on this shared machine were noisy, so the table reports server execution time. - Correctness: the benchmark fails unless the inherited statement returns the same positional rows in each index state. The check service result and the final wake-run rows of the new code must also match the pre-fix module for both cases. - Migration timing, normal migration runner, synthetic data: 200,000 runs (1.8 GB with 8 KiB incompressible contexts), 500,000 links and 100,000 deliveries. First run 4.2 s; rerun 0.38 s. Separate builds: links by comment 1.5 s, run wake comment 1.1 s, deliveries 0.7 s, links by delivery 0.3 s. All indexes were valid. The run index was 8.3 MB. - New tests: - `server/src/__tests__/github-review-check-state.test.ts` checks that the newest same-agent run is selected. It also checks that other agents, other companies, uppercase IDs, non-string values, list-only `wakeCommentIds`, comment-less links and unknown deliveries do not match. It checks that the generated statements can use the new indexes. - `server/src/services/native-runtime/external-review-wait.test.ts` checks that the reader reads each issue one time, keeps concurrent callers correct, and rejects all waiting callers when a read fails. - Red/green: with the pre-fix `review-check-state.ts`, the behavior test passes and the index test fails. With this change, both pass. - Focused runs pass: `issue-blocker-attention`, `heartbeat-issue-liveness-escalation`, review-wait, review-check-state, external-review-wait, review-repair (106 tests), and `external-chat-wait.integration` (285 tests). `pnpm --filter @paperclipai/server typecheck` and `pnpm --filter @paperclipai/db check:migrations` pass. Commands: ```sh pnpm --filter @paperclipai/server exec tsx ../scripts/benchmark-review-lookup-indexes.ts --baseline-ref=02bfe71a6b pnpm --filter @paperclipai/server exec tsx ../scripts/benchmark-review-lookup-index-migration.ts ``` ## Risks - The migration builds four indexes concurrently. It does not block writes. On a large database, the run index reads every run context one time. The local run took 1.1 s for 1.8 GB from a warm cache. Cold storage on smaller compute can be slower. - The run index adds one entry for each run insert and for each run update that is not a heap-only update. Many runs have no `wakeCommentId`, so these entries hold a null key. - The review check now sends two statements instead of one when a delivery has a comment. Each statement reads only a few index entries. - When two matching runs have the same `created_at`, either can be selected. The previous query had the same tie behavior. - This change does not change the number of in-review issues that one issue list reads. The blocked-inbox map still reads all in-review issues of the company. A smaller scope needs a separate change to the liveness classifier. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`) by Anthropic, in Claude Code with tool use (shell, file edits, local PostgreSQL benchmarks). ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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DottaandClaude Opus 5.5
|
0116e45958 |
perf(db): index pending budget Stops instead of scanning all run results (#20391)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Budget enforcement stops agent runs when a budget hard limit is reached. The stop intent is saved in each run's `result_json` until run control delivers it. > - The budget worker, run control, and the idle-sleep check find these pending stops with a predicate on `result_json`. No index supports that predicate. > - Each check therefore reads every heartbeat run and its large result JSON from TOAST. On a hosted database, this statement family was among the most expensive: about 8,000 calls at about 1 s each, about 9,800 s in total. > - Pending stops are rare. The predicate is constant, so a partial index can contain only those rows. > - This pull request adds that partial index. The SQL that the server sends does not change. > - The benefit is that each check reads a few index entries instead of the full table. The database has more capacity for request work. ## Linked Issues or Issue Description **What existing behavior does this improve?** The check for committed budget Stops that are not delivered yet. The budget worker runs it each time it looks for work (`hasPendingBudgetEnforcement`), and again for each delivery pass (`listPendingBudgetCancellationScopes`). Run control and the idle-sleep check use the same predicate. **Subsystem affected** Budget enforcement in the server (`server/src/services/heartbeat/budget-cancellation.ts`, `server/src/services/budgets.ts`, `server/src/services/heartbeat/run-control.ts`, `server/src/services/idle-sleep-safety.ts`) and the `heartbeat_runs` schema in `packages/db`. **Current behavior** The query groups all rows of `heartbeat_runs` and reads `result_json->'startupCancellation'->'budgetEnforcement'` for each row. A limit of 1 does not help, because the group and sort occur before the limit. Cost grows with the run history, not with the number of pending stops. **Proposed behavior** A partial index, `heartbeat_runs_pending_budget_cancellation_idx`, contains only runs with a pending budget Stop. The planner uses it for all four callers. The results are the same. **Reason and benefit** Local SQL measurements show a 300x to 1,000x decrease in time and buffer reads (see Verification). **Breaking changes** None. ## What Changed - Added the partial index `heartbeat_runs_pending_budget_cancellation_idx` on `heartbeat_runs (company_id)`. Its predicate is identical to `pendingBudgetRunCancellationPredicate`. - Added migration `0455_pending_budget_cancellation_index.sql`. It uses `CREATE INDEX CONCURRENTLY IF NOT EXISTS`, and it is in the list of migrations that run outside a transaction, as `0436` is. - Moved the scoped run-control read and the idle-sleep check into exported builders in `budget-cancellation.ts`, next to the scope list query. The SQL does not change. The callers and the test now share the same statements. - Added a real PostgreSQL regression test. It checks that delivered, malformed, and missing intents are not pending. It also EXPLAINs the statements that the callers send (scope list with limit 1 and 100, scoped read, `EXISTS` check) and requires the new index in each plan. If a person changes a query shape, the server predicate, or the index predicate, the test fails. - Added `scripts/benchmark-budget-cancellation-scan.ts`. It captures the SQL that the real service sends, then compares the plans, timings, and complete rows with and without the index. - Updated `doc/DATABASE.md`. ## Verification Red/green regression test: - Before the migration, the new test failed: the plan was `Seq Scan` with the predicate as a filter. - After the migration: `npx vitest run src/services/heartbeat/budget-cancellation.test.ts` passes (17 tests). - Also passed: `src/__tests__/budgets-service.test.ts`, `src/__tests__/idle-sleep-diagnostics-postgres.test.ts`, `src/services/budget-resume-continuation.test.ts`. - `pnpm --filter @paperclipai/db check:migrations`, and typecheck of `@paperclipai/db` and `@paperclipai/server` pass. Performance and result equality (local SQL measurements only): ```sh pnpm --filter @paperclipai/server exec tsx ../scripts/benchmark-budget-cancellation-scan.ts --runs=20000 --payload-kib=16 [--reverse] ``` - Fixture: embedded PostgreSQL 18.1. 20,241 runs in 2 companies, with incompressible result JSON of about 16 KiB (table 379 MB). 40 pending stops in 6 scopes, 200 delivered or malformed decoys, and 1 cross-company intent. - The SQL is the same in both treatments. The script toggles only the new index. 2 warmups and 7 samples per query. Rows are compared outside the timed part. Ordered queries must match in order. The scoped run-control read has no `ORDER BY`, so it is compared as a multiset. | Query (caller) | Baseline median | With index median | Shared buffers | | --- | --- | --- | --- | | `listPendingBudgetCancellationScopes(db, 1)` (worker `hasPending`) | 688 ms | 2.1 ms | 243,500 → 1,158 | | `listPendingBudgetCancellationScopes(db)` (delivery) | 799 ms | 1.4 ms | 243,500 → 1,158 | | Scoped pending runs (run control) | 357 ms | 1.1 ms | 121,835 → 322 | | `EXISTS` pending (idle-sleep check) | 440 ms | 0.37 ms | 240,560 → 2 | - Reverse order (index first) gave the same result: 524 ms → 1.6 ms, 464 ms → 1.4 ms, 306 ms → 1.0 ms, 306 ms → 0.42 ms. - Plans change from `Seq Scan` (or a broad bitmap scan) to `Index Scan` or `Index Only Scan` on the new index. - All result rows are equal in every run. Migration duration: - 20,241 runs (379 MB): index build 2.0 s to 3.9 s. - 200,241 runs with 8 KiB result JSON (2.1 GB): index build 5.6 s. With this table size, the four queries change from 1,148 / 879 / 514 / 4,392 ms to 1.1 / 1.2 / 0.85 / 8.3 ms. - The build is concurrent, so it does not block run writes. ## Risks - Migration: the build reads every run's result JSON one time. It is concurrent and resumable (`IF NOT EXISTS`). The executor repairs an invalid concurrent index on retry. - Write cost: run writes evaluate the index predicate. The index contains very few rows, so the extra cost is small. - Predicate drift: if a later change edits only one of the two predicates, the planner cannot use the index. The new regression test detects this. - The hosted timings are not measured yet. The local numbers come from a synthetic fixture. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, used through Claude Code with tool use (shell, file edits, local PostgreSQL). ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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|
DottaandClaude Opus 5.5
|
60a60a0cd1 |
fix(opencode): attribute unreadable tool-result images to the tool (#20399)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work
> - The Paperclip runner drives OpenCode agents. It sends their
OpenRouter and Paperclip-connection model calls through a local provider
proxy.
> - An agent often takes a screenshot of its own work and reads it to
verify the result.
> - OpenCode 1.18.34 cannot put images in OpenAI-compatible tool
results. It moves them into a synthetic user message ("Attached media
from tool result:"). For a text-only model, it replaces the image with
"ERROR: Cannot read image (this model does not support image input).
Inform the user."
> - The model reads that text as a message from the person. In a chat
eval, a DeepSeek worker redid its verification for about 5 minutes,
registered its deliverable twice, and ran out of the 15-minute attempt
clock.
> - This pull request moves that notice into the tool result that
produced the image, worded as a runner note, and removes the synthetic
user message.
> - The benefit is that a text-only agent sees a clear tool outcome and
continues its work. It does not mistake the notice for the person.
## Linked Issues or Issue Description
**What happened?**
An OpenCode agent on `openrouter/deepseek/deepseek-v4.1-flash-1017` read
a PNG screenshot that it made. The next model request contained a
user-role message with the text "Attached media from tool result: ERROR:
Cannot read image (this model does not support image input). Inform the
user." The model reasoned "The previous input from the user was ..." and
repeated finished work.
**Steps to reproduce**
1. Run OpenCode 1.18.34 with an `@ai-sdk/openai-compatible` provider and
a model that has no image input.
2. Have the model call the `read` tool on a PNG file.
3. Inspect the next chat-completions request. The last message is the
synthetic user message above.
**Expected behavior**
The model must get the notice as part of the tool result, not as a
message from the person.
**Environment**
Paperclip runner, OpenCode 1.18.34 (qualified pin), OpenRouter and
Paperclip-connection model routes.
## What Changed
- Add
`packages/paperclip-runner/src/drivers/opencode/tool-media-attribution.ts`.
It finds the OpenCode synthetic attachment message only when it directly
follows tool results. It moves each "Cannot read ..." or "empty or
corrupted" notice into the last tool result of that step as a runner
note. It keeps readable media in the synthetic message. It removes the
message when no media remains.
- The OpenCode provider proxy applies this rewrite before it forwards a
request. It re-serializes the body only when something changed.
- Messages written by a person are never changed. A person who attaches
an image to a text-only model still gets "Inform the user", which is
correct for that case.
- Add unit tests for the rewrite and an integration test through the
real provider proxy.
## Verification
- Red: the new proxy test failed before the change (`expected ... to
have a length of 4 but got 5`).
- Green: `npx vitest run
src/drivers/opencode/opencode-server-driver.test.ts
src/drivers/opencode/tool-media-attribution.test.ts` (82 tests pass).
`tsc --noEmit -p packages/paperclip-runner` is clean.
- Real binary: I ran the real OpenCode 1.18.34 binary with a mock
OpenAI-compatible server and had the model read a PNG. The captured
request has exactly the message shape that the test fixture uses.
- `pnpm verify` returned exit 2 (test files outside the resolved
graphs). Required CI supplies broad coverage.
- A paid live run of
`chat-features.runner-opencode.local.task-coordination.delegate-with-context`
will follow in a PR comment.
## Risks
- Low risk. The rewrite matches the exact OpenCode 1.18.34 strings. If a
future OpenCode version changes them, the rewrite does nothing and the
old behavior returns. It does not fail the request.
- The rewrite is deterministic, so prompt-cache prefixes stay stable
across requests.
- No persisted state changes. OpenCode history stays as it is. Sessions
saved before this change also get the rewrite when they resume.
- Providers that do not use the runner provider proxy are not covered by
this change.
## Model Used
- Claude Opus 5.5 (Anthropic), model ID `claude-opus-5-5`, used through
Claude Code with tool use (shell, file edits, test execution).
## Checklist
- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge
🤖 Generated with [Claude Code](https://claude.com/claude-code)
---------
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
|
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DottaandPaperclip
|
b2a7d322ed |
test: preserve runner commit stall acknowledgement invariants (#20383)
Assert that stalled event commits do not advance acknowledgement or committed state. Clarify the limits of historical failure attribution. Preserve the production implementation already merged in #20385. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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DottaandClaude Opus 5.5
|
50df9a19b9 |
perf(inbox): read only the execution workspaces Mine rows reference (#20388)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The Mine inbox is the first page a board user opens to see the tasks that need them > - The page loaded the company's full execution-workspace summary list and kept task rows hidden until that list arrived > - On a company with thousands of workspaces, that read checks each workspace row against the privacy predicate. It was the slowest request on the page > - The inbox needs workspace names only for the workspaces its rows reference, and only when the view shows workspace data > - This pull request adds an `ids` filter to the summary read, makes the inbox request only referenced workspaces, and stops rows from waiting for workspace data when the view does not show it > - The benefit is that Mine rows appear when the task data arrives, and the workspace read becomes a small bounded query ## Linked Issues or Issue Description **What existing behavior does this improve?** The Mine inbox (`/:companyPrefix/issues?view=mine`) shows its task rows late on companies with many execution workspaces. **Subsystem affected** Board UI inbox and the execution-workspace summary API. **Current behavior** The page calls `GET /api/companies/:id/execution-workspaces?summary=true` with no filter. On a large company this returned 8,758 rows (2.5 MB) and took 12.3 s on the server. The reveal gate included this read, so rows appeared at 13.4 s although `inbox/mine` arrived at 1.6 s. **Proposed behavior** The inbox requests summaries only for the workspaces its rows reference. Rows appear when the Mine task data arrives, unless the view shows workspace data. **Reason and benefit** The workspace read becomes a small bounded query, and it leaves the critical path for the default Mine view. **Breaking changes** None. The `ids` parameter is optional and additive. ## What Changed - `packages/shared`: add `executionWorkspaceSummaryIdsQuerySchema` (comma-separated UUIDs, 1–100 distinct values) and `EXECUTION_WORKSPACE_SUMMARY_IDS_MAX`. - `server`: `GET /companies/:companyId/execution-workspaces` accepts `ids`. Bad input returns 422. The service adds `inArray(execution_workspaces.id, ids)`. The company scope and the actor read condition still apply, so privacy does not change. - `ui/src/api/execution-workspaces.ts`: `listSummaries` accepts `ids`. New `listSummariesByIds` reads ids in chunks of 100 and concatenates the results. - `ui/src/pages/Inbox.tsx`: the workspace query is keyed on the sorted distinct `executionWorkspaceId`s of the rows the inbox holds (Mine, touched, context and remote search issues). It uses `keepPreviousData` and runs only when isolated workspaces are on and at least one id exists. - Reveal gate: rows wait for the workspace read only when workspace data changes what the rows show. This is workspace grouping, a visible Workspace column, or an active search (workspace names are searchable). Otherwise rows reveal without it. - Tests: route ids pass-through and 422 cases (non-uuid, empty, separators only, more than 100); service test for the id filter with company scope and the read condition; UI api chunking test; Inbox tests for "rows reveal while the workspace read is pending when no workspace column or grouping is active", rows waiting when the Workspace column is visible, and "shows the resolved isolated workspace name" with the id-filtered call. Follow-ups (not changed here, they still read the unfiltered list): - `ui/src/pages/LegacyInbox.tsx:772` - `ui/src/components/IssuesList.tsx:985` - `ui/src/components/LegacyIssuesList.tsx:888` - `ui/src/components/NewIssueDialog.tsx:570` (filtered by project and reuse, but not by ids) ## Verification Focused checks on this revision: - `cd server && npx vitest run src/__tests__/execution-workspaces-routes.test.ts src/__tests__/execution-workspaces-service.test.ts -t "summar|ids"`: 14 passed (embedded Postgres ran the service test). - `cd ui && npx vitest run src/api/execution-workspaces.test.ts src/pages/Inbox.test.tsx`: all passed. - `pnpm --filter @paperclipai/server --filter @paperclipai/ui --filter @paperclipai/shared typecheck`: passed. - `pnpm check:token-gates`: clean. - `pnpm verify` selected 2,481 Vitest files (the shared validator change reaches most suites). I stopped it at a 25-minute limit on a heavily loaded shared host. Before the limit, three server tests outside this change failed: `agent-commentary-skills` (skill mount), `agent-config-read-access` (24.8 s timeout) and `agent-directory-working-copies`. Required CI supplies the full coverage. - Review fix `fc3f82dae0`: when workspace data is visible, the reveal gate also waits while `keepPreviousData` supplies the previous id set's summaries. A new test switches Mine → Recent to a new workspace and checks the Recent row stays hidden until its workspace loads. It fails without the change. - Follow-up commits `bf34f84823` and `8fc743b5ca` add a 100-row Mine test with a counted workspace id scan. It fails with the old `= []` defaults and passes with the stable `NO_ISSUES` default. Performance (local, synthetic fixture): - Instance: isolated worktree instance, `authenticated` mode, signed in as a non-admin company member so the real workspace privacy predicate runs. Production UI bundle (`PAPERCLIP_UI_DEV_MIDDLEWARE=false`). Headless Chromium 1440×900, a new browser context per run (cold HTTP cache and cold query cache). macOS, Apple Silicon, with other local sessions running. - Fixture: 8,750 execution workspaces (each with a source task and a privacy-source key), 38,750 tasks, 150 Mine tasks; the Mine snapshot returns 100 rows that reference 100 workspaces. - Finish event: the first `[data-slot="task-row"]` is in the DOM. | Measurement | Before (`02bfe71a6b`) | After | | --- | --- | --- | | Cold time to rows, median of 7 | 1,209 ms (1,046–1,312) | 702 ms (567–1,209) | | Workspace summary read, server wait (time to first byte), median of 7 | 496 ms unfiltered, 2.0 MB | 18 ms with 100 ids, 22 KB | The difference of medians is 507 ms. This is close to the unfiltered read's wait on this fixture (about 550–590 ms in the browser runs). The runs were sequential batches, not alternating pairs. Limits: this fixture does not reproduce the 12.3 s server time seen on the development instance. Here the unfiltered read cost 0.5–1.7 s and grew with the company's task count. The browser gain on the original instance should be close to that instance's unfiltered read time, but I did not measure it there. ## Risks - Low risk. The `ids` filter only narrows the existing query. It does not change the read condition or the company scope. - A row whose workspace is not readable by the actor shows no workspace name, as before. - When the Workspace column or grouping is visible, rows still wait for the workspace read. That read is now small. - When the id set changes, the query refetches all chunks. Before a view first reveals, rows wait for the new summaries if workspace data is visible. After that, the previous names stay visible while a refresh loads. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with tool use (shell, file edit, headless browser). Extended reasoning on. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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DottaandPaperclip
|
b09f17fbfd |
fix(agents): repair queued setup through task connection cards (#20361)
## Thinking Path > - Paperclip manages AI agents doing work for people. > - Agent verification must finish before an accepted task can start. > - A missing AI account default can prevent verification before a provider starts. > - Lifecycle policy treated that owned configuration refusal as a temporary failure and retried each minute. > - The accepted turn remained Queued without explaining the prerequisite. > - Park account configuration failures and reuse the task's existing inline connection card. > - Successful repair rechecks verification and releases the original queued turn under its original authority. ## Linked Issues or Issue Description **What happened?** An OpenCode agent selected the responsible user's OpenRouter default, but that default did not exist. Verification retried unchanged configuration indefinitely and its accepted task stayed Queued. **Expected behavior:** Preserve accepted work, explain the setup prerequisite, and let the appropriate person repair it using the existing task connection UI. Completion must verify the agent before starting the same queued turn. Genuine pause, approval and access gates remain effective. **Reproduction:** Create an OpenCode Runner agent with a responsible-user OpenRouter binding and no personal default; assign a task while verification is pending. The base retries verification and shows an unexplained queue. Related: #18702 handles pending task connection recovery after account repair. This PR handles the earlier agent-verification boundary. #20330 addresses a separate Codex governed-wait timeout and is already merged. ## What Changed - Share owned account-selection failure evidence through a pure library contract. Lifecycle policy parks those configuration failures with fixed, redacted guidance; temporary infrastructure errors retain their retries. - Batch setup-state reads for unstarted queued turns. Distinguish manual repair from automatic setup retries and preserve Stop, started/history state and lifecycle holds. - Reuse the existing `connection_intent` card, account selection and completion APIs. Its controller-only `agentSetup` marker accepts only never-started legacy turns; runtime tokens still require a running run. - Address the card to the lifecycle verifier's account owner, preserving the task's execution principal and private-task visibility. Attach missing cards on admission, verification, startup and full recovery, including retained retries and continuations. Repeated delivery and publication remain bounded. A new queued turn supersedes the setup card of a stopped turn; generic connection cards retain cross-run reuse. - Recheck lifecycle verification after usable-account completion, then release the existing turn through the normal readiness path. Preserve decline, Stop, reassignment and changed setup-owner gates. Fence an in-flight verification failure from overwriting a repair; add no provider wake or recurring worker. - Park owned account refusals during resume as well as initial verification. Bind setup cards to the lifecycle operation, settle obsolete deliveries, and keep explicit Retry guidance accurate. - Reuse the router’s existing lifecycle pin for setup repair without rerouting the task, advancing the pool cursor, or replacing its saved binding. Legacy direct-account cards remain readable. - Hide the incorrect Resume banner during setup, retaining genuine manual/budget pause controls. Document the execution and retry contract. ## Verification - Red: eight original behavior assertions failed on the base, including the real selector's retry decision and the real batched queue projection. Six owned selection cases failed classification. Temporary-error presentation, different task/verifier users, retained retry/continuation recovery and the setup Resume banner also have failing-before/passing-after regressions. - Green: 430 affected backend, lifecycle, shared-contract and UI tests passed before the final review corrections. Subsequent focused runs cover one inline card, real account selection/completion, duplicate delivery/publication, verification before readiness, unchanged run authority, private tasks, no extra provider wake, decline/Stop/reassignment, company isolation, invalid runtime tokens, transient retries and redacted diagnostics. - Final setup/card and generic connection-service suites: 49 tests passed. The stopped-turn case failed before the correction, then passed with real account completion, the stopped source remaining cancelled, and the replacement source remaining queued. - After rebase, all 129 focused assertions passed. The local queue suite’s 88 execution assertions passed repeatedly, but its database-fixture teardown exceeded both 30-second and 120-second hooks. An isolated queue case completed, and the setup/connection suites fully passed. The original queue test and cleanup remain unchanged; broad CI supplies the full-suite result. - Server/UI typechecks, module boundaries, token gates and diff checks passed. `pnpm verify --explain` requested broad CI because the execution-contract document changed; no redundant full local suite was substituted. - Real source acceptance: macOS arm64, Node 26.4.0, isolated embedded PostgreSQL and local board identity. Created an OpenCode/OpenRouter agent and task through the API with no default. Admission retained one unstarted turn and produced the existing inline Connect OpenRouter card. The browser opened its credential form and closed it without entering credentials. The same card/run persisted after server restart and reload, with the setup label and no incorrect Resume. The browser also reproduced Stop followed by a new queued turn retaining the stale card on the prior head. On `12f609c98372fd1e50644028db75cfcc8deb210d`, startup superseded the stale card and retained the same replacement turn, with the original turn still cancelled and no provider execution. - The earlier CI case-search failure also reproduces on exact base `0e3fdebea8257bdff11573081c76b306f12db230` without this PR. Its repair is now in master via #20371; this branch is rebased onto it and contains no API-search changes. - Staging's actual Runtime test returned “Connect an account and choose your personal default” before provider startup. The original turn later started independently on deployed code, then hit a separate workspace-export failure. Automatic file recovery subsequently marked that run successful; its task remains Blocked and the trial’s useful output is unverified. This PR is not deployed; provider authentication through its card and downstream publication remain unverified. No account, credential, default, permission or binding was changed during diagnosis. - Previous revision review: Greptile 5/5 on `12f609c98372fd1e50644028db75cfcc8deb210d`, with all four inline findings addressed and resolved. [Full CI passed](https://github.com/paperclipai/paperclip/actions/runs/42713494508) on that revision: 59 successful checks, one neutral check and three intentional skips, with no pending or failed checks. - Latest revision `976bcae993805a8a2222395bbff9394f6791b424`: resume, router and Retry-copy regressions failed before repair. Green: 92 lifecycle/setup/shared tests, 83 setup/generic-connection/router tests, and 137 UI/shared tests. Server/UI typechecks, module boundaries and token gates passed. [Full CI passed](https://github.com/paperclipai/paperclip/actions/runs/42720731137) on this exact revision: 59 successful checks and three intentional skips, with no pending or failed checks. Greptile reviewed this head at 5/5; all six review findings are addressed and resolved. Real Stop/retry acceptance retained the same replacement turn and current-operation card through two actual server restarts, with no provider execution. ## Risks - Known account configuration failures now require repair or explicit Retry. Temporary failures keep automatic retries; accepted work and authority remain intact. - The projection adds one company-scoped batch read only for unstarted queued turns. Card attachment examines at most 100 active candidates and adds no timer, worker, schema or migration. - The optional stored setup-card marker requires an aware reader during rollback. No run/session/checkpoint identity format changes. Setup presentation grants no access and cannot bypass verification or other gates. ## Model Used - OpenAI GPT-6 (Codex), with reasoning, tool use, code editing and test execution. The exact serving model identifier and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandClaude Opus 5.5
|
7e93ccb4b3 |
perf: fetch recent task summaries in one request (#20389)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The board UI sidebar shows the person's recent tasks on every page, including the Mine inbox > - The sidebar refreshes those rows through `GET /companies/:id/issues/summaries`, which accepted at most five IDs > - `useRecentTasks` sent the chunks one after another, so a 25-task history cost five sequential requests > - On staging each request took 3–6 s, so the recent-task rows settled about 20 s after load and every request competed with the inbox rows > - This pull request raises the per-request cap to 50 and fetches any remaining chunks in parallel > - The benefit is one summaries request for a typical history instead of a serial chain ## Linked Issues or Issue Description **What existing behavior does this improve?** The refresh of the sidebar's recent tasks on page load. **Subsystem affected** Board UI (`ui/src/hooks/useRecentTasks.ts`) and the `/issues/summaries` route bound (`packages/shared`, `server/src/routes/issues.ts`). **Current behavior** A history of N recent tasks sends ceil(N/5) summaries requests in series. Measured on staging on 2026-11-09 for a cold Mine load: five requests of five IDs, started at 1.0 s, 4.3 s, 8.1 s, 12.3 s and 18.4 s, each taking 3.3–6.1 s. **Proposed behavior** Up to 50 recent tasks are one request. Longer histories send their chunks at the same time. **Reason and benefit** The staging server is saturated, so each extra serial round trip delays the sidebar and the inbox rows. One request removes four round trips from a typical load. ## What Changed - `ISSUE_SUMMARIES_MAX_IDS` is now 50 (was 5). The shared validator, the route's 400 message, the service guard and the OpenAPI description use the new bound. - `useRecentTasks` builds all chunks first and fetches them at most three at a time (`RECENT_TASK_SUMMARY_CONCURRENCY`). The recent list has no size cap, so this keeps a long history from becoming a burst. The cache key, omission handling and pruning are unchanged. A failed chunk still fails the batch, so nothing is pruned on a partial failure. - Tests: the route test accepts exactly `MAX` IDs and rejects `MAX + 1`; a hook test checks that at most three chunks are in flight; the API test uses the constant; `useRecentTasks` tests cover a 25-task history in one request and a 103-task history with three chunks in flight together, with and without a failed chunk. - New browser check `tests/perf/collections/recent-task-summaries.spec.ts`: a Mine load with a 12-task history sends summaries requests that each carry all 12 IDs, and the server answers 200 with all 12 tasks. ## Verification - `pnpm verify` (selected Vitest files) passes. - `server`: `npx vitest run src/__tests__/issue-summaries-routes.test.ts src/__tests__/issue-display-status.test.ts` passes (embedded PostgreSQL). - `ui`: `npx vitest run src/hooks/useRecentTasks.test.tsx src/api/issue-summaries.test.ts src/components/task-chat/TaskChatBlockerLinks.test.tsx src/components/CoordinatorSidebar.test.tsx src/components/SidebarRecentTasks.test.tsx` passes. - Browser check against a disposable local instance: `PAPERCLIP_COLLECTION_PERF_BASE_URL=http://127.0.0.1:<port> pnpm exec playwright test --config tests/perf/collections/playwright.config.ts recent-task-summaries.spec.ts`. It passes on this branch. With `master`'s hook and constant it fails: three requests of 5, 5 and 2 IDs. ## Risks - Low risk. The route still validates UUIDs, deduplicates, and applies the same read authorization per row. Blocker attention is computed with set-based queries, so 50 IDs is the same number of queries as 5. - During a rolling deploy, a new UI against an old server would get a 400 for a history above five tasks. The server serves the UI bundle, so both change together on a normal deploy. The sidebar keeps its stored snapshot when the refresh fails. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with tool use (shell, file edits, browser). 1M-token context window. Extended thinking was off. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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Nicky LeachandClaude Opus 5.5
|
5858cef8f9 |
perf(runner): poll the provider right after an ACK releases it (#20374)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The Runner (`paperclip-runnerd`) sends provider events to the controller over one authenticated socket > - Its main loop reads one control frame, then polls the provider only after a read finds no frame > - After the controller ACKs the last sent event, the next read waits the full 250 ms `RUNTIME_READ_TIMEOUT` before the Runner polls the provider again > - A Codex turn start needs one or two such rounds before the Runner reads `turn/started`, so every Codex turn waits 250 ms or 500 ms for no reason > - This pull request reads only the frames that are already queued after a consumed control frame, and then polls at once, when this connection produced the unacknowledged output > - The benefit is 250 ms less time to `turn/started` for each ACK round, and faster event delivery after each ACK ## Linked Issues or Issue Description This is an enhancement. The fields follow `.github/ISSUE_TEMPLATE/enhancement.yml`. **What existing behavior does this improve?** Codex turns wait for the Runner read timeout before the Runner sends `turn/started`. **Subsystem affected** The Runner (`paperclip-runnerd`) durable loop in `packages/paperclip-runner/runner/crates/runner-core/src/durable/`, for the local Codex provider. **Current behavior** On a hosted test deployment (48 h, 114 Codex turns), `runner.transport.started_event` for Codex has two modes: | Codex turn | n | `started_event` p50 | | --- | --- | --- | | no provider cold start in the trace | 57 | 468 ms (all < 700 ms) | | provider cold start in the trace | 57 | 918 ms (51 of 57 ≥ 700 ms) | For Claude (ACPX) turns, the p50 is 90 ms. ACPX returns `turn.started` with the command result. Codex reads `turn/started` from the provider in a later poll. **Proposed behavior** The Runner polls the provider as soon as the controller ACK releases the poll gate. The time to `turn/started` then follows the controller round trip, not the read timeout. **Reason and benefit** - Real Codex (`codex app-server` 0.157, local) sends `turn/started` 2–16 ms after its `turn/start` response. The provider is not the cause. - `runner.transport.started_event` starts when the `turn.start` command result arrives. It ends when the controller commits `turn.started`. In this time the Runner sends `turn.accepted`, waits for its ACK, waits 250 ms, polls, and sends `turn.started`. - On the first turn after a provider launch, the first poll returns only the launch diagnostic that the executor retained. A second ACK round and a second 250 ms wait come before the poll that reads `turn/started`. This is the difference between the two modes above (about 450 ms: 250 ms wait and one event round). - So 250 ms (warm turn) or 500 ms (first turn) of each Codex `started_event` is the read timeout. The rest is one or two controller event rounds (about 200 ms each on that deployment), less than 20 ms of Codex time, and the 10 ms pump interval of the TypeScript transport. - The expected benefit is 250 ms less per warm Codex turn start and 500 ms less for the first turn after a provider launch, plus faster Codex event delivery after each ACK. **Breaking changes** None. No protocol, schema, or controller change. ## What Changed - `AuthenticatedTransport::receive_queued_json` reads with a 1 ms timeout and then restores `RUNTIME_READ_TIMEOUT`. - New `CommandExecutor::provider_poll_is_live` hook (default `false`). The local Codex executor returns `true` only when it owns a running provider with no open startup attempt, so a poll cannot restore or launch a provider. The native executor forwards it for the local Codex facade only. - In the steady-state loop, after a consumed control frame, the Runner uses `receive_queued_json` when it has sent output that this connection produced (a command or a provider poll) and the executor reports a live provider. If no frame is queued, it polls the provider at once. - When a provider poll returns no output, or when no frame was consumed, the Runner uses the 250 ms read as before. A 1 ms read follows only a consumed frame, so an idle loop does not spin. - The replay boundary is the highest source sequence before the welcome's pending commands run. A fresh command delivered in the welcome counts as this connection's output. Replayed commands only resend their stored results. - Replayed output from an earlier connection or process, ACPX, and the other providers keep the 250 ms read. The controller can still send its next command before a poll restores a provider. (Without the live-provider gate, six ACPX source-recovery tests in `runnerd-acpx-source-reconciliation.test.ts` failed: the fast poll restored the ACPX sidecar before the next recovery command.) - Control frames that are already queued behind the ACK are still read and executed before the provider poll. The ACK gate in `poll_executor_events_after_controller_ack` is unchanged. ## Verification - `cargo test -p paperclip-runner-core --lib durable::` (121 passed). Five new tests in `src/durable/tests/ack_release_poll.rs`, included by the transport test module like `hosted_retention.rs`: - `acknowledged_output_polls_the_provider_without_waiting_out_the_read_timeout`: the provider poll follows the ACK read in less than `RUNTIME_READ_TIMEOUT`. Without the change it fails (the poll waited 280–356 ms). - `control_queued_behind_an_ack_runs_before_the_next_provider_poll`: a command sent in the same write as the ACK executes before the provider poll. - `welcome_command_output_polls_the_provider_without_waiting_out_the_read_timeout`: the output of a fresh command in the welcome also releases the poll at once. With the replay boundary taken after the welcome commands, it fails. - `replayed_output_ack_keeps_the_read_timeout_before_the_provider_poll`: after a reconnect, a command sent 50 ms after the ACK of replayed output executes before the provider poll. Without the replay condition it fails. - `restorable_provider_ack_keeps_the_read_timeout_before_the_provider_poll`: when the executor does not report a live provider, a command sent 50 ms after the ACK executes before the provider poll. - `npx vitest run src/live/runnerd-` in `packages/paperclip-runner` with the new debug `paperclip-runnerd`: run with `--no-file-parallelism`. Before the welcome-boundary fix: 576 passed, 3 skipped. After it: 575 passed, 3 skipped, and 1 failure once (`stops a lost runnerd's provider and escaped tool job from its lineage journal (journal=true)`, a SIGKILL timing test) while `cargo test` ran at the same time. `runnerd-codex-transport.test.ts` then passed 293 of 293 three times with this build, and three times with the base build. - Local before and after measurement with the real Runner, the TypeScript transport, and the fake Codex app-server (8 turns, 2 runs each, debug build): | span | before p50 | after p50 | | --- | --- | --- | | `runner.transport.started_event` | 377 ms (first turn 682–695 ms) | 119–122 ms (first turn 117–119 ms) | | `runner.transport.turn_start` | 462–471 ms (first turn 775–780 ms) | 204–212 ms (first turn 247–251 ms) | - The saving on the hosted deployment is not measured. From the analysis above, the expected saving is about 250 ms for a warm Codex turn and about 500 ms for the first turn after a provider launch. ## Risks - Only local Codex gets the fast path. ACPX streaming keeps the old 250 ms wait after each ACK. A later change can opt ACPX in when its poll can prove that it does not restore the sidecar. - More provider polls during Codex streaming: a poll can now follow each ACK at once instead of after 250 ms. Batches can become smaller, so the provider state save for each batch can happen more often. Each event already has its own durable save. - A command that the controller sends more than 1 ms after its ACK can now arrive after a provider poll. This was already possible after 250 ms. The change applies only when this connection produced the output, so the provider is already active. - If the Runner cannot restore the 250 ms read timeout, it treats the socket as failed and reconnects. It does not continue with a 1 ms timeout. - No protocol, schema, or controller change. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`) in Claude Code, with tool use (shell, code search, Honeycomb queries) and extended reasoning. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [ ] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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DottaandClaude Opus 5.5
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c985541a57 |
perf(db): index retry-exhaustion receipts for the attention scan (#20386)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The attention feed shows runs that failed after automatic retries stopped > - To find these runs, the feed reads every `heartbeat_run_events` row of the company and filters the rows by a message prefix > - Run output makes this table very large, so each feed request does a large scan > - On a hosted test database, this one statement used the most total database time: 923 calls at a mean of 5 s (4,709 s in total) > - Request authentication waits behind this background work, so all users feel the load > - This pull request adds a small partial index that holds only the retry-exhaustion receipts > - The benefit is that the same query reads a few index entries instead of all company events ## Linked Issues or Issue Description **What existing behavior does this improve?** The attention feed query that finds retry-exhausted runs (`listAttentionExhaustedRuns`). **Subsystem affected** Server attention feed and the `heartbeat_run_events` table schema. **Current behavior** The query reads all company rows in `heartbeat_run_events`, filters them by `event_type = 'lifecycle'` and the `Bounded retry exhausted` message prefix, and then joins the few matches to failed or timed-out runs. The cost grows with all run output. It does not grow with the number of exhausted runs. **Proposed behavior** A partial index holds only the matching receipts. The query plan reads the index and joins a few rows. The query text and the result do not change. **Reason and benefit** The scan was the most expensive statement by total time on a loaded hosted database. A local reproduction shows a 54x faster query and about 116x fewer buffer reads. **Breaking changes** None. The API, the feed rows, and their order do not change. ## What Changed - Add the partial index `heartbeat_run_events_retry_exhausted_idx` on `(company_id, run_id, id DESC)`. The index covers only rows where `event_type = 'lifecycle'` and `message like 'Bounded retry exhausted%'`. - Add migration `0454`. It uses `CREATE INDEX CONCURRENTLY IF NOT EXISTS`. The migration runner runs it as a top-level statement, the same as migrations 0432, 0436 and 0450. - Add a regression test. It pins the row order (newest run first, then the newest receipt on a tie) and the latest receipt per run. It also checks that the query plan can use the new index. If the query predicate changes so that the index no longer applies, the test fails. - Add `scripts/benchmark-exhausted-run-attention.ts`. It measures the same query with and without the index, and the time to build the index. - Document the index in `doc/DATABASE.md`. ## Verification Cause and thesis. The scan cost comes from reading all company events, not from the few exhausted runs. Thesis: an index that holds only the receipts makes the query cost depend on the number of receipts, and keeps the result identical. The benchmark below confirms the thesis. Rejected alternative without a migration. I first tried a LATERAL lookup that starts from the failed and timed-out runs. On the same fixture it was about 2x slower (median 379 ms against 194 ms). It reads the full event history of each failed run with random I/O, and that costs more than one sequential scan. Local SQL benchmark (the SQL that the service generates; same SQL with and without the index): ```sh pnpm --filter @paperclipai/server exec tsx ../scripts/benchmark-exhausted-run-attention.ts --runs=30000 --events-per-run=100 --samples=9 ``` Fixture (synthetic): one company with 30,000 runs (3,819 failed or timed out) and 3.0 M events, plus a decoy company with 0.5 M events. The table is 1.4 GB. About 5% of events are `lifecycle` events. Events of 20 concurrent runs are interleaved. 1 in 23 runs has a receipt, some runs have two receipts, and output decoys contain the prefix. Two agents are terminated. Embedded PostgreSQL 18.1 on an Apple laptop. The hosted database is Neon with different compute, so the absolute times are local SQL measurements only. The script runs two cycles (without index, then with index; then with index, then without index) to expose cache bias. Each measurement has 2 warmups and 9 samples. | Query | Without index | With index | Samples and spread | Output check | | --- | --- | --- | --- | --- | | `listAttentionExhaustedRuns` | median 157 ms (96–1,271 ms) | median 3.3 ms (2.2–5.7 ms) | 18 each | 133 rows, positional rows equal in all 4 measurements | | Buffers (EXPLAIN ANALYZE) | 127,743 blocks | 5,580 blocks | | plan uses the new index (asserted) | Speedup: 48x (median), on head `ae6037b2a0` (the same SQL and index as the final head). The machine was under heavy load from other work, so the spread without the index is wide. An earlier run on the first head gave 248 ms against 4.6 ms (54x). Index build (`CREATE INDEX CONCURRENTLY` from the migration file): 1.7 s and 2.5 s for the 1.4 GB table. Index size: 152 KiB. Review fix: the query now writes `event_type = 'lifecycle'` as a SQL literal, not a bound parameter. With prepared statements, PostgreSQL can reuse a generic plan. A generic plan cannot prove that a bound parameter matches the index predicate, so it would not use the index. Tests: - `cd server && npx vitest run src/__tests__/attention-service.test.ts`: 44 passed. The new test checks a fresh plan and a forced generic plan (`plan_cache_mode = force_generic_plan` with `PREPARE`). It failed with the bound `event_type` parameter and with a changed message prefix (confirmed red), and it passes with the fix. Locally, the file's `afterAll` database cleanup hook timed out on a heavily loaded machine (load average about 28). The timeout also occurs when the new test is excluded. - `pnpm --filter @paperclipai/db check:migrations`: passed. - `pnpm --filter @paperclipai/db typecheck` and `pnpm --filter @paperclipai/server typecheck`: passed. - `pnpm verify`: see the CI results for this head. ## Risks - Migration time. A concurrent index build reads the full `heartbeat_run_events` table and does not block writes. Locally, the build took 1.2–2.5 s for 1.4 GB. The time grows linearly with the table size. I did not time the build on a production-size clone. On a database with a 5 s full company scan, I estimate the build at tens of seconds, which is in the 1–2 minute budget. This estimate is not proven. - If the build stops, PostgreSQL can leave an invalid index. The migration runner repairs invalid concurrent indexes when it runs again, and `IF NOT EXISTS` makes a rerun safe. - The index predicate must stay textually equal to the query predicate. If someone changes the message prefix or binds a predicate value as a parameter, the planner cannot use the index. The new test catches both cases, for fresh and generic plans. - Each new receipt writes one more small index entry. Receipts are rare, so the write cost is very small. - The hosted improvement is not verified until deployment. After deployment, compare a new query-statistics window for this statement. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, used through Claude Code with tool use (shell, file edits, local PostgreSQL). Standard context window and reasoning mode. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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DottaandPaperclip
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199670ba99 |
fix(accounting): prevent usage receipt stalls during streamed run updates (#20385)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Native Runner commits usage receipts before it acknowledges retained events. > - Usage receipts and streamed run logs update the same run row. > - A repeatable-read snapshot can become stale before the receipt writer locks that row. > - Continuous log writes can exhaust all accounting retries and stall the retained event. > - This pull request uses the existing run lock with READ COMMITTED for standalone receipt writes. > - Other accounting operations keep their consistent snapshot. Stall diagnostics retain safe nested error codes. ## Linked Issues or Issue Description Related: #20235. **What happened?** A hosted native run stopped on a retained usage event. Its diagnostic reported `Error at source seq N`. The saved outbox and accounting records locate the failing delivery boundary. Traces show repeated accounting transactions while streamed events still updated the run row. The historical inner exception is unavailable. A controlled PostgreSQL reproduction proves a matching defect: a run-log append after company validation makes the receipt writer's repeatable-read snapshot stale. Repeated appends exhaust all four retries with SQLSTATE `40001`. This is a demonstrated failure mechanism; attribution of the historical incident remains an inference. **Expected behavior** Commit the receipt under its existing run-row lock despite concurrent run-log writes. Observe concurrent finalization and preserve late-receipt debt. Keep duplicate receipts idempotent and reject conflicting or cross-company receipts. **Steps to reproduce** Run `server/src/services/usage-receipts-read.test.ts`. The concurrency regression uses real PostgreSQL and the production run-log append function. It commits a log append after company validation and before the receipt locks the run. Before the repair, the receipt rejects with a wrapped `40001` after four attempts. After the repair, it commits once. The finalization variant verifies that a newly settled run receives late-receipt debt without replacing settled state. ## What Changed - Allow aggregate-lock-protected accounting writers to select READ COMMITTED. Keep repeatable read as the default. - Use READ COMMITTED only for standalone usage receipt writes. Keep the existing run lock, immutable receipt journal, replay checks and transactional budget-work publication. - Add PostgreSQL regressions for concurrent log appends, concurrent finalization, duplicate delivery and the unchanged default snapshot. - Read the outer event-commit error and at most three nested causes for an existing safe error code. Exclude exception messages and SQL. - Document receipt isolation and bounded stall diagnostics. ## Verification - Red: the production receipt writer exhausted four retries with PostgreSQL `40001` under controlled concurrent run-log appends. - Red: wrapped database and transport stall diagnostics returned `Error` instead of `40001` and `ECONNRESET`. - Green: Runner control-plane tests passed all 207 cases. All 68 server assertions passed across receipt reads, native usage delivery and cost accounting. Cost-accounting teardown exceeded its 30-second limit twice on this loaded host, after all 28 assertions passed. The workspace project retained its configured 30-second hook limit despite the CLI override. This is a local suite cleanup failure, not a passing suite; the same revision passed the complete server suites in CI. - Server layered TypeScript checking passed, including source and test layers. Runner TypeScript checking passed. Server checks cover `ccfe3bdeb1ab88537a03fd6af9044f66863939a5`; the unchanged Runner checks cover its parent. - Local environment: macOS arm64, Node 26.4.0, disposable embedded PostgreSQL. Native usage-delivery tests use the real Rust receiver. - CI at `ccfe3bdeb1ab88537a03fd6af9044f66863939a5`: [build](https://github.com/paperclipai/paperclip/actions/runs/42714760702/job/129493568428), [typecheck](https://github.com/paperclipai/paperclip/actions/runs/42714760702/job/129493568367), native Runner integration, browser shards and all nine serialized server groups passed. All 12 general server shards passed in the [full run](https://github.com/paperclipai/paperclip/actions/runs/42714760702). Final rollup: 59 successful checks/statuses, three intentionally skipped checks, no pending or failed checks. - [Greptile reviewed this revision at 5/5 with no actionable findings](https://github.com/paperclipai/paperclip/pull/20385#issuecomment-6753163397). - Hosted evidence came from the task, run, saved sandbox outbox, accounting receipts and traces. The run started fresh and did not cross a deployment. No original agent turn was replayed. - The hosted repair has not been deployed. The original task has not been resumed. A fixed-revision remote-provider user journey remains unverified. ## Risks - READ COMMITTED changes snapshot timing for standalone receipt writes. The run-row lock protects all mutable receipt/accounting reads and serializes competing receipts and finalization. Other accounting operations retain repeatable read. - Receipt identity, replay conflict checks, company scoping, budget publication, retry bounds and acknowledgement rules remain intact. - No persisted format, provider identity or database schema changes. Existing saved state needs no migration. - Diagnostics inspect at most four objects and retain only the existing identifier format, with an 80-character code limit. - The reproduced race matches the incident boundary and timing, but the original inner exception was not recorded. Rollout and live acceptance remain necessary before incident resolution. ## Model Used - OpenAI Codex, GPT-6 family, with code and shell tools. The exact model ID and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandClaude Opus 5.5
|
09241442ea |
fix(server): let a native reviewer approve its review stage (#20373)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Execution policies can require an independent review stage before a task is done > - A native (Runner) agent that is the active reviewer had no way to record its decision > - `PATCH status: "done"` is refused for a native run that owns the task (#18411), and `paperclip_finish` accepts the report but leaves the stage pending > - The reviewer then searches the API until a deadline, and the task stays in review with nobody able to decide it > - This pull request records the final-stage approval on `PATCH` without releasing the run's lock, and lets the run's own finish report set the final status > - The benefit is that an agent reviewer can actually approve its review stage, in one short turn ## Linked Issues or Issue Description Refs #18411 (added the native status guard). Related: #20264 (explicit stage-decision operation, still open; this change is narrower and compatible with it). **What happened?** A native reviewer agent was woken as the active `review` participant. It read the deliverable and wrote its review in about 100 seconds. It then called `paperclip_finish` with `done`. The tool answered "Completion report accepted; the task's configured review stage is still pending". It then tried `PATCH /api/issues/{id}` with `status: "done"` and a comment. The route refused it with `native_run_status_reported_by_finish`. The agent searched the API for 2 more minutes and found no other path. The stage stayed pending. When the run ends with `done`, the status arbiter sees the pending stage and keeps the task in review (`governed_gate_pending`), so the stage can never resolve. **Expected behavior** The active review/approval participant can approve its stage from a native run. The task reaches `done` after the approval. The implementer still cannot approve. A run that is not the active participant still cannot change the task status. **Steps to reproduce** 1. Create a task with an execution policy that has one `review` stage with a native agent participant. 2. Move the task to `in_review` so the stage is pending and the reviewer agent wakes. 3. In the reviewer run, call `PATCH /api/issues/{id}` with `{ "status": "done", "comment": "Approved: ..." }`. 4. Observe `409 native_run_status_reported_by_finish`. Call `paperclip_finish` with `done` and observe that the stage stays pending. ## What Changed - `PATCH /api/issues/:id`: when the requester is the native run that holds the task lock and is the active participant, a `status: "done"` request on the final stage now records the approval decision (`executionState` completed, decision row, activity). The route removes `status` from the write, so the task stays `in_review` and the run keeps its execution lock. The run's `paperclip_finish` report then sets `done` through the normal status arbiter. - An intermediate-stage approval (which would hand the task to the next participant) and every other status change from such a run keep the existing `native_run_status_reported_by_finish` refusal. - `paperclip_finish` from the active participant (`done` or `needs_review`) while its stage is still pending is now rejected with the exact decision path, instead of being accepted with "stage still pending". - The native finalizer now treats the final-stage approval that the run itself recorded (read from the `issue_execution_decisions` row, bound to this run and agent) as the completion authority for its clean `done` report. Before this, a reviewer that cited free-text evidence had its report graded as incomplete, and the task was reopened as `in_progress` with a new wake for the reviewer. Failed verification, blocking remaining work, attention requests, other dispositions, and a still-pending stage keep the old outcome. - The reviewer/approver wake text names the decision path (`PATCH` with `status` and a required decision comment) and says a completion report does not record the decision. A Runner reviewer that needs changes is told to report them with `paperclip_block`, because a changes request from the run that owns the task is a reassignment that stops that run. - The locked review-policy recheck treats the deferred approval as a verdict, so a policy changed to `human_only` before the locked write still refuses it. ## Verification - `pnpm exec vitest run server/src/__tests__/issue-agent-mutation-ownership-routes.test.ts server/src/__tests__/issue-execution-policy-routes.test.ts server/src/__tests__/issue-comment-reopen-routes.test.ts server/src/__tests__/issue-execution-policy.test.ts packages/adapter-utils/src/server-utils.test.ts`: 5 files, 595 tests pass. - `pnpm exec vitest run server/src/services/native-runtime/native-completion-feedback.test.ts`: 29 tests pass (embedded PostgreSQL), including the decision-row binding for `executionStageApprovedByRun`. - `pnpm exec vitest run server/src/services/native-runtime/status-arbiter.test.ts server/src/services/native-runtime/native-run-finalizer-telemetry.test.ts server/src/services/native-runtime/native-stale-owner-completion.test.ts`: 72 tests pass. - New route tests fail without the route change (409 instead of 200/422) and pass with it. The new feedback test fails without the feedback change ("Completion report accepted" instead of a rejection). - `npx tsc --noEmit -p server` and `-p packages/adapter-utils`: pass. - A route test changes the review policy to `human_only` between the first check and the locked write; the deferred approval is refused (403). - Live full-stack chat eval `task-coordination.independent-review` (Runner, OpenCode) with this change: passed in GitHub Actions run 42705964209 (eval branch with the first two commits cherry-picked). The reviewer run recorded its approval 24 s after its review brief was released, reported `done` 14 s later, and the finalizer set the task to `done` with reason `execution_stage_approved`; total reviewer run 73 s. The earlier run 42702224713 exposed the finalizer evidence issue that the second commit fixes. ## Risks - Low to medium. The change is limited to one request shape: a native run, holding the lock, that is the active participant of a pending final stage, sending `status: "done"`. All other requests keep the old guard. - Between the approval and the finish report, the task shows `in_review` with a completed `executionState`. If the run fails before it reports, the existing native recovery owns the task, as for any other run. - Previous-release story: no persisted shape changes. A reviewer run that started before the deploy could not have recorded a deferred approval (the old route refused it), so the new finalizer input is false for it and the old outcome applies. - Intermediate-stage approvals and changes requests from native runs are still refused by the route. A Runner reviewer reports required changes with `paperclip_block`, which keeps the stage pending for a person. A self-service changes request needs the deferred handoff semantics in #20264. ## Model Used - Anthropic Claude Opus 5.5 (`claude-opus-5-5`), tool use and code execution in Claude Code. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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DottaandPaperclip
|
facd409073 |
perf(workspaces): index legacy workspace companion lookups (#20372)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Online workspace migration must retain prepared sources and recovery holds. > - Companion discovery reads saved workspace references from run profiles. > - The selector can scan large saved profiles even when it returns few rows. > - This pull request adds one company and workspace expression index. > - Companion discovery uses the same expression as existing migration lookups. > - The result preserves each source check and reduces history scan work. ## Linked Issues or Issue Description **What happened?** The companion selector used a JSON path expression with no matching index. A read-only plan on about 22,000 run rows showed a sequential scan over a table with about 1.3 GB of table and TOAST storage. A repeated inspection reached its statement timeout. Existing migration lookups use a different JSON operator form, so one expression index must match both callers. **Expected behavior** Use a company-scoped indexed lookup. Keep prepared and finalized references, the exact text comparison, native issue references, and run order. Keep all source and recovery validation. **Steps to reproduce** 1. Retain many run profiles with saved workspace references and wide JSON fields. 2. Inspect a workspace with few matching companion runs. 3. Explain the company and saved-workspace selector. Without the new index, it can scan run history and read unrelated JSON values. **Paperclip version or commit** Baseline: `0e3fdebea8257bdff11573081c76b306f12db230`. **Deployment mode** Server with PostgreSQL. The local proof uses disposable PostgreSQL 18.1. The observed server plan used PostgreSQL 17.11. Related: [batched companion discovery in #19735](https://github.com/paperclipai/paperclip/pull/19735). The existing batching remains in place. The duplicate search found no open workspace index change. This branch also carries the isolated API route-summary correction shared with [#20370](https://github.com/paperclipai/paperclip/pull/20370). ## What Changed - Add one concurrent index on company ID and the saved native workspace ID expression. The index has no state, runtime, or status predicate. - Use nested JSON operators in companion discovery. Existing migration lookups already use this expression. Keep both accepted states and the same ordering. - Register the migration on the existing top-level migration path. Retain its advisory lock, interrupted index repair, and completion journal behavior. - Add a real PostgreSQL migration and ordered-result test. Update the existing companion query counter for the equivalent SQL form. - Generate the schema snapshot and retain the five newest snapshots. - Describe the task case-list route as “Find the cases for a task.” This keeps the route on the first discovery search page. Search logic and test assertions are unchanged. ## Verification - `pnpm --filter @paperclipai/db exec vitest run src/heartbeat-workspace-companion-index.test.ts --maxWorkers=1`: **1 passed**. It builds the concurrent index through the canonical migrator, checks index validity, preserves prepared/finalized and cross-issue/null-issue results, excludes foreign and malformed references, and checks one journal entry after a second migration call. - `pnpm --filter @paperclipai/server exec vitest run src/services/remote-workspace-online-source.test.ts -t 'discovers all Git companions' --maxWorkers=1`: **1 passed; 86 not selected**. This uses the real source owner and retains finalized recovery holds, company isolation, and a fresh obligation between inspections. - `pnpm --filter @paperclipai/db typecheck`, migration numbering/safety checks, and `git diff --check`: **passed**. - One small local SQL comparison used the captured baseline selector, the changed selector, 3,012 synthetic rows, about 37.8 MB of table storage, and the new expression index. Ordered results were identical. One client timing changed from **8.70 ms to 0.86 ms**. This is one local warm-cache comparison, not a server latency claim. Hosted improvement is **unverified**. - Initial setup attempts failed before the affected test ran: registry access, local tsx IPC, and a missing SDK build. The canonical Node 24.22.2/pnpm 9.15.4 setup and SDK prerequisite resolved these setup failures. The local SQL timing client used Node 26.4.0; the focused application tests used Node 24.22.2. - [The first CI run](https://github.com/paperclipai/paperclip/actions/runs/42705129724/job/129460702073) failed the inherited case-history API first-page search assertion. The same failure was reproduced on the unchanged base: the route ranked sixth for “case for task.” The isolated route-summary correction from #20370 passed the same three assertions. The search algorithm and assertions were not changed. - No public command changes require a documentation update. The schema and migration record the added index. No hosted DDL or deployment was performed for this PR. - Final head `c50101dabf46ade42b545d2051d724d93f413ccd`: [full CI](https://github.com/paperclipai/paperclip/actions/runs/42707623920) passed with 60 successful checks and three configured skips. [Fresh Greptile review](https://github.com/paperclipai/paperclip/pull/20372#issuecomment-6752305627) is 5/5 on this head with no open threads. ## Risks - The index adds storage and write cost when a run profile changes. - A concurrent build reads the table and can wait for old transactions. The existing migration path runs it outside a transaction and can repair an interrupted invalid index. - Existing nested-operator lookups can use the index. The companion selector needs this code change to use it. Other JSON path queries are unchanged. - The small local result does not establish end-to-end import speed or PostgreSQL 17 hosted latency. Fresh deployed measurement remains necessary. ## Model Used OpenAI Codex, GPT-6 family. The exact runtime model ID and context window are not exposed in this session. Used reasoning, code editing, shell tools, and local PostgreSQL tests. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandClaude Opus 5.5
|
1baac27888 |
feat(server): chat bootstrap reads for instant task opens (#20355)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - People open tasks from the task list to see the latest messages and to reply to an agent > - Before the task chat shows its first frame, it waits for about ten separate reads: the issue, recent comments, comment input facts, recent activity, recent runs, interactions, attachments, live runs and the active run > - On a busy instance each read waits for the database, and the slowest read decides when the chat appears. A cold open takes 1.5–4 s on staging > - This pull request adds one read that returns all of that data for up to ten tasks, in the same JSON shapes as the existing endpoints, plus a single-task form > - The benefit is that the task list can preload its top tasks, and a cold open needs one round trip instead of about ten. The UI change is in the stacked pull request ## Linked Issues or Issue Description **Problem or motivation** A task open waits for about ten reads. With the database under load, these reads queue, and a cold open takes seconds. The list cannot preload a task cheaply, because each task costs about ten requests. **Proposed solution** `GET /api/companies/:companyId/issues/chat-bootstrap?ids=` returns the first-frame data for up to 10 tasks. `GET /api/issues/:ref/chat-bootstrap` returns it for one task. Each field equals the matching single endpoint's JSON exactly. **Alternatives considered** - Prefetch the existing endpoints for each list row. For 30 rows this sends about 210 requests to a database that is already the bottleneck. - A new projection with different shapes. This would duplicate client merge logic, and freshness rules could drift. **Roadmap alignment** This is part of the task-loading performance plan in #20276. It follows #20277, #20284 and #20286. ## What Changed - `packages/shared`: - `ISSUE_CHAT_BOOTSTRAP_MAX_IDS` (10). - `issueChatBootstrapQuerySchema`: UUIDs or identifiers, normalized, deduplicated and strict. - The `IssueChatBootstrap` and `IssueChatBootstrapItem` types. - New `server/src/services/issue-chat-bootstrap.ts`: - Resolves the refs inside the company and applies the `issue:read` decision to each task. - Reads the tasks with a concurrency of 2, and returns them in request order. - `server/src/routes/issues.ts`: - The core issue read and the recent-comments read are now shared helpers, so the bootstrap and the single endpoints use the same code. The core view keeps its Server-Timing header. - Adds the batch route and the single-task route. - Excludes the single-task route from the issue ETag middleware, so a fetch without validators always gets a 200 with `Cache-Control: private, no-store`. - New `server/src/services/issue-run-presence.ts`: - The live-runs and active-run payload builders, moved from `agents.ts` without change. - The existing routes call them, and their behavior is unchanged. - `server/src/routes/openapi.ts`: entries for both routes. ## Verification - `cd server && npx vitest run src/__tests__/issue-chat-bootstrap-routes.test.ts` passes 17 tests. They run on embedded Postgres with privacy enforcement on. They cover: - Each field deep-equals its single endpoint's JSON, for an ordinary task and for a conversation task. - The single-task route equals the batch item, by UUID and by identifier. It is never answered with a 304. - Items keep the request order, with UUIDs and identifiers mixed. - Private, other-company, missing and unknown tasks are omitted, and none of their data appears. The single-task route returns 404 for them. - Malformed, extra or repeated parameters return 400. More than 10 ids also return 400. - A task-bridge key gets 403. - A 10-task request writes nothing: no inserts, updates or deletes, and no activity-log or comment changes. - The issue, agent, activity, live-run, cold-open, summaries, ETag and OpenAPI route suites pass: 56 files, 1,771 tests. - `cd server && pnpm typecheck` passes. - Query cost, local embedded Postgres, one 10-task request: about 49 SQL statements per task, 55–130 ms in total. A test fails if it goes above 60 per task. ## Risks - **Database load:** the stacked UI preloads up to 30 tasks, about 1,500 statements at idle time. This is the same work as opening those tasks, but it is done before the person clicks. The work runs in sequential requests of 10, with 2 tasks at a time. Most of the cost is existing run decoration. Live runs and the active run decorate the same running run, so that work runs twice. Sharing it is a follow-up. - **Stricter access:** live runs and the active run now apply the `issue:read` policy inside this endpoint. The existing routes keep their company-only check. - Hidden tasks are returned, as `GET /issues/:id` returns them. - No migration and no persisted-state change. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, used in Claude Code with tool use (shell, browser automation, file editing, subagents). ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [ ] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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DottaandPaperclip
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c67909cb0f |
fix: keep tool approvals valid through OAuth refresh and delayed review (#20340)
## Thinking Path > - Paperclip lets people manage agent work and approve app actions. > - An approval must bind the action that the person reviewed. > - OAuth access tokens can expire while that person is away. > - The old target snapshot treated each token refresh as a new authorization. It also imposed a one-hour review deadline. > - This pull request separates token renewal from authorization identity and keeps the human decision durable. > - Current access, the reviewed arguments, meaningful target changes, task closure, and execution receipts still control dispatch. > - People can approve later without repeating a decision after routine connection maintenance. ## Linked Issues or Issue Description **What happened?** A pending app action returned `approved_tool_target_changed` after its OAuth tokens refreshed. The tool and connection settings were unchanged. The same card also expired after one hour. A sign-in problem could discard an accepted decision before provider dispatch. **Expected behavior** The original card remains reviewable after routine OAuth refresh and a server restart. A later approval runs the exact reviewed action once. A connection repair preserves the decision while Paperclip verifies the same authorization. Meaningful changes require a new review. **Steps to reproduce** 1. Connect an OAuth MCP app and configure an action to require approval. 2. Request the action, then refresh its access and refresh tokens before approving. 3. Approve the original card. Before this change, it returns HTTP 409 even when the authorization is unchanged. 4. Wait more than one hour. Before this change, the card expires without a task-specific deadline. **Paperclip version or commit** Reproduced from master at `76254ead2229`. The final branch is rebased onto current master. ## What Changed - Add versioned approval target comparison. New snapshots bind credential identity epochs, consent, permissions, ownership, connection configuration, tool contracts, and credential references. Authenticated OAuth refresh preserves identity. Manual credential replacement does not. - Remove the implicit one-hour deadline from ordinary app action reviews. Keep explicit deadlines and terminal-task expiry. Synchronize the nullable interaction deadline in shared contracts and UI. - Keep accepted, undispatched actions when sign-in is required. Show a saved-approval repair state. Resume on committed connection changes after target and access revalidation, without an idle retry loop. - Preserve the existing execution claim, result receipt, and uncertain-outcome no-replay rules. - Explain meaningful target changes without inviting the person to retry the stale card. - Add a production task-thread Storybook example and document compatibility and recovery behavior. ## Verification - Red: production-refresher invalid-grant handling and formal-approval withdrawal during a sign-in wait also reproduced as failing regressions before their fixes. - Red: before implementation, the local OAuth HTTP fixture failed for both public and confidential clients with `approved_tool_target_changed` after token refresh. - Green: the extended fixture passes for public and confidential clients with personal and shared grants. It covers actual local HTTP token exchanges, multiple refreshes, a rebuilt gateway, an ended originating run, approval after 25 hours, duplicate approval, preserved sharing arguments, sign-in waiting, and event-driven repair. The gateways use the production OAuth refresher; an invalid refresh preserves the accepted decision before provider dispatch. Omitted-scope responses cover equivalent scope-reporting changes. The provider is an isolated local fixture, not a deployed Notebook service. - Negative controls refuse changed consent, scopes, tool definition, destination, and manual credential replacement before provider execution. - Existing gateway service, connected-tool acceptance, secret owner, secret service, unsigned-review queue, and connection-health suites passed. Explicit-deadline fixtures still prove expiry behavior, including deadlines on accepted sign-in waits. A withdrawn formal approval cancels a waiting action before connection recovery. - Approval card, task-chat, error-copy and target-comparison tests passed. Server and UI typechecks passed. Token gates and Storybook catalog checks passed. - Inspected the new saved-approval repair card in local Storybook using the production task thread. It shows a reconnect link and no second approval button or false running state. - `pnpm verify --explain` returned exit 2 and requested broad CI coverage. [Full CI](https://github.com/paperclipai/paperclip/actions/runs/42677855507) passed on `eb4f1c7caa9ee6e802c314ffc5eadec475a5de0c`, including build, typecheck/release registry, general and serialized tests, and all eight browser shards. - Greptile reviewed the same final head at 5/5. Both findings from the first review are fixed and their threads resolved; no open follow-ups remain. ## Risks - No database migration is needed. The new comparison reuses the vault identity epoch. Only authenticated OAuth refresh code can preserve that epoch; HTTP credential-write schemas cannot select that behavior. - Earlier signed requests keep their original exact-version checks and saved deadlines. Already-expired cards are not revived. A historical card whose credentials already changed needs a fresh review. - A new consent, account, permission set, destination, or manually replaced credential must not inherit the old authorization. Reconnection continues automatically only when revalidation proves the same saved authorization. - The interaction enrichment now permits a null deadline. Existing string deadlines remain valid. The web client and shared validator change together. - This PR does not deploy to staging or perform a live Notebook publication. ## Model Used OpenAI Codex, GPT-6 family, with repository tools, code execution, and browser inspection. The runtime does not expose the exact model ID, context-window limit, or reasoning-mode label; those values are not asserted. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
|
0e325e8d52 |
fix(runner): settle saved handoffs after verified shutdown (#20336)
## Thinking Path > - Paperclip manages AI agents and their work. > - An agent can save a question or approval handoff before its provider stops. > - A missing provider terminal notification does not prove that the saved work failed. > - Runner already verifies provider exit, event drain, tool settlement and suspension. > - This change uses that proof to settle the same saved handoff. > - Unproven shutdown holds continuation and explains that the work is saved. > - Recovery must never repeat the completed work or allow overlapping execution. ## Linked Issues or Issue Description Refs #20330. That PR extends the Codex terminal drain window. This change handles the separate case where no terminal arrives but the owned shutdown can prove stopped execution. **What happened?** A native run saved a human handoff, accepted cancellation, and later stopped its provider. The missing terminal notification still made the attempt fail and show “Couldn’t finish this attempt.” **Expected behavior** Keep the saved handoff. Accept its yielded result after either an authoritative provider terminal or verified shutdown of the exact execution. If shutdown remains uncertain, retain the handoff and explain the hold without offering a duplicate Retry. **Steps to reproduce** Save a governed wait, acknowledge interruption, and omit the provider terminal. The new regression uses the real Runner binary and a controlled Codex process. The old runtime rejects the handoff instead of asking the existing shutdown owner to settle it. **Deployment mode** Native Runner with Codex. Local verification used macOS arm64 and Node 26.4.0. Hosted sandbox recovery has not been qualified. ## What Changed - Add an optional driver shutdown-settlement operation. Runner returns proof only after its existing stop, drain, tool settlement and suspension barrier passes. - Bind the receipt to the run, normalized session and turn. Persist it with the saved wait and validate it during recovery. - Complete the same yielded handoff after verified shutdown. Retire the stopped session from warm reuse. Do not invent a provider terminal or complete usage. - Retain a named shutdown-pending condition under the existing bounded same-run recovery policy. Preserve actual provider failures and integrity failures. - Show saved-work shutdown guidance in task and inbox presentation. Keep genuine approvals authoritative and disable duplicate Retry. - Document the completion and restart contract. The checkpoint field is additive; older checkpoints retain the terminal-or-shutdown path. ## Verification - Red: the new runtime regression failed against the original implementation because verified shutdown was never requested. Server presentation and error-classification regressions also failed before the fix. - Red: both inbox shutdown states showed generic text before the inbox change. - Green: Runner runtime, shutdown and harness-backend suites pass 301 tests. Tests cover missing terminals, failed stop proof, wrong identity, cancellation, late proof, genuine provider failure, and restart after receipt persistence. Recovery completes once without another model turn. - Green: the native executor and task-presentation suites pass 1,371 tests. Execution projection, inbox and blocker presentation pass 125 tests. Two test-authoring mistakes were corrected: an integrity-error text expectation and an assertion for a nonexistent projection field. Their initial failures remain in local logs. - Runner TypeScript and full server layered type checks pass. Token gates and diff whitespace checks pass. - Live provider acceptance: real Runner and Codex with gpt-6.1-sol, one disposable local workspace, one tool call, and one deliberately dropped terminal notification. The saved file, bound settlement receipt, one accepted yielded result, one provider turn, confirmed provider exit and suspended Runner all passed. The tool handler and persistence port were controlled. This does not claim a full server or hosted journey. - The full browser question-and-answer cell stopped before execution because OPENAI_API_KEY was absent. No model work ran in that attempt. Hosted sandbox recovery and the full browser continuation journey remain unverified. - `pnpm verify` returned exit 2 because the execution-spec change requires broad CI. Required CI will supply that coverage; a full local repository suite was not repeated. - Review correction in `8553da244e`: a failed trailing-event write could hide a provider failure. A new regression reproduced red, then passed after all ordinary drain errors retained the named pending condition. No settlement receipt or result can be accepted after that error. The live missing-terminal check passed again on the corrected runtime. - The real PostgreSQL control-plane regression and three existing governed-wait controls pass. The new case persists one accepted yielded result, a bound shutdown receipt, and the original pending human question without a provider terminal. - First CI revision `7c2cb9b1`: test-program typecheck found a missing `PrpEvent` annotation in the new fixture. The annotation is fixed and the Runner test-program typecheck passes. Runner support also timed out in the unchanged `registered roots remain protected even when equal to genuine public static bytes` case after 30 seconds. One unchanged local diagnostic passed in 3.69 seconds overall. The hosted timeout cause remains unknown; no timeout, fixture, or assertion was weakened. [Original failed support job](https://github.com/paperclipai/paperclip/actions/runs/42670851821/job/129346900133). - Rebased onto the merged #20330 and current recovery changes. The combined branch passes 1,402 executor/presentation tests. Both prompt and 18-second provider terminals still pass. A warm session with no terminal passes after the full 30-second drain and verified stop/suspension. Its initial overly broad assertion rejected a nonterminal turn event; the corrected assertion rejects every terminal type. The rebased CI gate was cancelled before any runner or step started; its cause is unconfirmed and it supplies no validation credit. Final revision `b49ec5a144` starts fresh CI and review. - Final-head CI attempt 1 failed before creating jobs. GitHub reports an internal server error (correlation `2c576b07-b67f-4179-a69f-74f7d99cd926`), followed by empty runner-selection outputs for the aggregate jobs. One unchanged-commit retry was requested; the initial admission failure remains recorded. [CI run](https://github.com/paperclipai/paperclip/actions/runs/42673159868). - **Current blocker:** final head `b49ec5a144e94e41e96e2508a79bd9aec91fe45a` has a fresh 5/5 Greptile review and zero unresolved threads, but required CI is not complete. GitHub reports an active [Actions and Checks API incident](https://www.githubstatus.com/incidents/tp8cghg7tlc4). Attempt 2 ran only part of the full selected graph. Build, canary, Rust, sandbox providers, admitted browser shards and other completed test jobs passed. The E2E aggregate correctly failed because `policy` and `e2e_shards` had `abandoned` results. Server shard 5/12 received a runner shutdown signal at 18:36:55 UTC and its test step was cancelled; its job still reports in progress. The shutdown cause is not established. The separate review workflow had the same pre-execution internal-error class and passed one bounded retry. No further retry was submitted during the incident. Resume with the missing/cancelled coverage after GitHub recovers; do not count the absent typecheck, Runner or support jobs as passes. [Failed coverage gate](https://github.com/paperclipai/paperclip/actions/runs/42673159868/job/129354318236), [interrupted server shard](https://github.com/paperclipai/paperclip/actions/runs/42673159868/job/129350854174). ## Risks - A missing terminal can use one additional bounded shutdown interval. Unknown shutdown still blocks continuation. - Provider terminal and usage accounting keep their separate meaning. The receipt proves stopped execution and settled tool outcomes, not model success. - Recovery rejects a foreign receipt, a later turn, an active turn with a settled receipt, and an actual failed provider terminal. - There is no database migration. Older checkpoint shapes remain readable. Drivers without this optional proof retain a named pending state. - This PR does not deploy the fix or repair an existing hosted task. ## Model Used OpenAI Codex, GPT-6 family, with reasoning, repository tools and local code execution. The exact serving model ID and context window are not exposed in this session. Live test inference used gpt-6.1-sol. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
|
79bf733012 |
fix(runner): share the bounded ACPX cleanup proof (#20332)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Runner keeps a lifetime fence until the original ACPX provider stops. > - A recovered Runner must prove that fence is free before it clears saved cleanup state. > - Suspension and other recovery paths already wait for transient listener holders. Recovered shutdown used one immediate probe. > - That difference made parallel Rust tests fail after they dropped their original listeners. > - This pull request uses the existing bounded proof for recovered shutdown and removes the repeated test retry. > - The benefit is one cleanup rule, with the same fail-closed proof and no new work on normal task dispatch. ## Linked Issues or Issue Description Fixes: #20210 Thanks to @genius-0963 for the test-only fix proposed in #20321. That related alternative adds a test-only shutdown retry. This change applies the existing bounded cleanup proof in the shared shutdown path and removes the same retry pattern from native-provider integration tests. It also tests a single shutdown call while the original quorum is still held. ## What Changed - Use `await_provider_lifetime_fence` for a recovered executor with no live session and unconfirmed provider exit. Delete the unused one-shot helper. - Keep the acquired quorum held through the existing durable state write. A failed proof leaves `providerExitUnconfirmed` set. - Give the shared timeout message wording that applies to shutdown and suspension. - Extend the recovery test with a worker-start signal. Hold the original listeners until the single shutdown call is waiting, then release them and assert successful cleanup without a provider session. - Use the same bounded proof in the retired-quorum fixture test. Remove the duplicate retry loop from the native-provider test helper. - Document the bounded recovery cleanup wait. ## Verification - macOS arm64, Rust `1.97.1`, source base `3a2f71db31`, head `368fc814f7ccf88ac4bf68ca9eb7f1a6c294307b`, isolated worktree. Only targeted checks ran locally. - `cargo fmt --manifest-path packages/paperclip-runner/runner/Cargo.toml --all -- --check`: passed. - `cargo test --manifest-path packages/paperclip-runner/runner/Cargo.toml --locked -p paperclip-runner-core --lib acpx_provider_backend::tests`: 45 passed on the rebased head (5.21 seconds). The initial head also passed five more parallel-test runs (45 tests per run), with no failure. - `cargo test --manifest-path packages/paperclip-runner/runner/Cargo.toml --locked -p paperclip-runner-core --test native_provider_backend acpx_`: 14 passed on the rebased head (9.43 seconds). These tests use the real Rust executor and controlled sidecars. - Negative control: restore only shutdown's original one-shot proof. The new regression fails at `shutdown must wait while the original lifetime still holds a quorum`. Restore the fix and the affected module passes. - Independent parent verification on current commit `368fc814f7`: the three exact recovery, held-quorum, and retired-quorum tests passed (3 tests, 5.06 seconds). Independent source review confirmed the unchanged three-file scope and found no actionable issue. - The active-turn recovery test still holds a live quorum through the five-second bound. It checks that shutdown refuses cleanup, saved state remains unconfirmed, and the provider never starts. It then releases the quorum and confirms cleanup. - Standard Greptile scored current commit `368fc814f7ccf88ac4bf68ca9eb7f1a6c294307b` 5/5 with no review threads. - Initial GitHub general-server shard 7 failed in unchanged `remote-workspace-nested-verification.test.ts`, at its 15-second wait for a child-process import checkpoint (expected one row, got zero; both Vitest attempts). [Failed job](https://github.com/paperclipai/paperclip/actions/runs/42668667033/job/129339371815). That fixture runs Node, PostgreSQL, Git, and storage migration; it does not run the native Runner or the changed Rust cleanup. The cause of the checkpoint timing miss remains unknown. The focused retry passed on the unchanged source ([successful retry](https://github.com/paperclipai/paperclip/actions/runs/42668667033/job/129347569863)). This proves recovery, not the cause of the original timing miss. GitHub kept the reusable-workflow aggregate failed after that job-only retry and rejected both a final-gate retry and a failed-job retry. A subsequent run-level retry materialized only the gate and aggregate jobs; its aggregate inputs reported prior jobs as `abandoned`, so it failed without a new test failure. A new `full-ci` label event requests a fresh workflow graph on the same commit. The reason for those rerun-state results is not established. - The fresh `full-ci` run [42674033208](https://github.com/paperclipai/paperclip/actions/runs/42674033208) then lost several runners mid-job. The maintained [runner-loss recovery 42677096525](https://github.com/paperclipai/paperclip/actions/runs/42677096525) classified all four failed jobs as runner loss: typecheck, E2E shards 2 and 8, and server shard 4. The evidence was a shutdown log or lost-communication annotation. It retried the failed jobs together; canceled sibling jobs were also requeued. This is runner-interruption evidence, separate from the earlier checkpoint assertion. - The maintained recovery attempt again failed the same partial-checkpoint assertion in unchanged `remote-workspace-nested-verification.test.ts`, twice ([job 129361525237](https://github.com/paperclipai/paperclip/actions/runs/42674033208/job/129361525237)). Neither checkpoint-failure job logged runner shutdown or lost communication; their resource summaries reported no significant constraint. The child phase at the timeout remains unknown. No further blind retry or TypeScript change is included here. Related startup-handshake work exists in #20339; its controlled-delay evidence establishes a deadline-boundary defect but does not establish the phase of these original CI failures. - Rebased onto current master after upstream #20339 merged. That separate change fixes a demonstrated child-startup/checkpoint-deadline boundary. It does not prove which child phase caused the earlier zero-checkpoint assertions. This PR still changes only its original Rust and documentation files. Fresh GitHub CI on the new base will establish recovery, not retrospective cause. - Full local tests and a local release build were not run. Current-head [PR CI 42681719411](https://github.com/paperclipai/paperclip/actions/runs/42681719411), [Runner Windows 42681719803](https://github.com/paperclipai/paperclip/actions/runs/42681719803), and [Docker Runner 42681719601](https://github.com/paperclipai/paperclip/actions/runs/42681719601) all passed on `368fc814f7ccf88ac4bf68ca9eb7f1a6c294307b`. The full check list has 59 successes and 5 intentional skips. GitHub supplied broad typecheck, build, and optimized Rust coverage. This is new-base recovery; the cause of the original checkpoint assertion failures remains unproved. ## Risks - A genuinely unconfirmed original provider can now hold recovered shutdown for up to the existing five-second proof deadline. The proof returns immediately when two candidate ports are free. - The changed branch requires both no in-memory provider session and unconfirmed saved cleanup. Live-session shutdown and ordinary dispatch keep their existing paths. Outer controller close deadlines remain authoritative. - State saved by the previous release carries forward unchanged. No schema, launch identity, profile digest, protocol, or retry-budget change. - No live provider session or hosted deployment was tested. The tests cover cleanup proof, refusal, durable state, and controlled provider execution. ## Model Used - OpenAI GPT-6 through Codex, with reasoning, repository inspection, code editing, and targeted test execution. The exact serving revision and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub references) - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandClaude Opus 5.5
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4a349ea447 |
fix(chat): tell agents that instruction saves keep no history (#20328)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Chat agents can read and edit other agents' instruction files with dedicated tools > - #14420 changed instruction saves: Paperclip now keeps only the current file and records no revision history > - The agent-facing descriptions still describe a "canonical instruction revision" history > - In a live eval, a chat agent asked to undo an instruction change found an empty history, read it as a test artifact, guessed the earlier text from the current file's wording, wrote it, and reported a restore > - This pull request tells agents the real contract in chat guidance and in the tool and API descriptions > - The benefit is that an undo with no saved version leaves the instructions alone and asks the person, instead of inventing an earlier version ## Linked Issues or Issue Description Refs #14420 Refs #19515 (open: would list save records from the activity log. Those records hold no content, so they still cannot restore earlier text) **What happened** A person asked a chat agent: "Undo Morgan's last instruction change." Morgan's history was empty, because saves do not record revisions. The agent's reasoning said the history "is only populated with canonical revisions" and that there was "no revision tracking in this e2e harness". The agent then removed the last line of AGENTS.md and replied "Undone. Morgan's AGENTS.md is back to …". No saved source had the earlier text, so the agent guessed it. **Expected behavior** When there is no saved earlier version, the agent leaves the instructions unchanged. It says plainly that no earlier version was saved, and it asks the person for the text they want or which part to remove. **Steps to reproduce** 1. Create an agent with an AGENTS.md file. Edit the file once through `PUT /api/agents/{id}/instructions-bundle/file`. 2. `GET /api/agents/{id}/instructions-bundle/history?path=AGENTS.md` returns `{"revisions":[]}`. 3. Ask a chat agent to undo the agent's last instruction change. The agent rewrites the file from a guess. ## What Changed - `AGENT_CHAT_DIRECTIVE` now says three things: - Saves keep only the current instruction files. - An empty history means no earlier text is retained. - An undo with no listed revision must leave the file unchanged, say that no earlier version was saved, and ask for the wanted text. - The `get_agent_instruction_history` contract now says that it lists only pre-upgrade revisions, and that an empty list means Paperclip retains no earlier version. - The `restore_agent_instructions` contract now says that only listed pre-upgrade revisions can be restored. - The OpenAPI summary for `GET /api/agents/{id}/instructions-bundle/history` says the same. - The semantic tool contracts, the protocol manifest and the seeded eval catalog hash are regenerated. - Regression tests check the new guidance and both live tool contracts. ## Verification - `pnpm exec vitest run server/src/__tests__/agent-conversations.test.ts server/src/__tests__/board-access-denial.test.ts server/src/__tests__/codex-local-execute.test.ts server/src/__tests__/runner-api.test.ts` passes. - In `packages/paperclip-runner`, `pnpm exec vitest run src/semantic-tools/paperclip-semantic-tools.test.ts src/catalog src/evals/native-execution.test.ts` passes. - `node scripts/generate-semantic-contracts.mjs --check`, `generate-protocol-manifest.mjs --check` and `generate-replay-goldens.mjs --check` pass. - `tsc --noEmit` passes for `server` and `packages/paperclip-runner`. - The live result is the chat eval `agents.restore-instructions`, run with this change cherry-picked: run 42666621831 passed. The agent replied that Morgan's history is empty and no earlier version exists. It left AGENTS.md unchanged and asked for the exact text or the line to remove. Run 42660236086, without this change, failed: the agent guessed and rewrote the file. ## Risks - Low risk. Only agent-facing text changes, and no behavior changes. - The runner semantic catalog hash changes. This is the same kind of change as #19983. - If #19515 lands, history lists save records without content. The guidance wording must then say that listed saves without content cannot be restored. Whichever PR merges second must reconcile the two texts. ## Model Used - Anthropic Claude Opus 5.5 (`claude-opus-5-5`), with tool use and code execution in Claude Code. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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DottaandPaperclip
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76254ead22 |
fix(runner): allow Codex interruption to settle governed waits (#20330)
## Thinking Path > - Paperclip manages AI agents and their work. > - A native run must stop provider work before it waits for a human response. > - The Codex transport allows 30 seconds for a control command. > - The governed-wait loop used its 15-second default for Codex. > - A valid interruption terminal at 18 seconds therefore failed the run. > - This change gives Codex the existing 30-second terminal drain allowance. > - The run still fails if it cannot prove that the provider turn ended. ## Linked Issues or Issue Description **What happened?** A Codex run can save a human wait, accept an interruption, and fail before the provider sends its terminal. Its saved wait remains intact, but normal finalization does not occur. **Expected behavior:** Allow terminal delivery through the transport's bounded command window. Keep missing-terminal cases closed. **Steps to reproduce:** Run the new protocol regression against the old backend. The real Runner binary uses a controlled Codex process that delays its interruption terminal for 18 seconds. The run fails at the 15-second drain deadline. The same process passes with this change. **Paperclip version or commit:** Reproduced against `1b7fe33432`. **Deployment mode:** Local test of the native Runner path. The incident was observed in a hosted sandbox. **Installation method:** Source checkout. **Operating system:** macOS arm64 for local verification. Hosted incident runtime was Linux. **Additional context:** No matching repair was found. This addresses a reproducible deadline mismatch. The hosted log ends terminal observation at 15 seconds, so it cannot prove whether that provider would have settled within 30 seconds. The approved local live-provider check passed. This PR does not claim recovery of the hosted task. ## What Changed - Give Codex a 30-second governed-wait terminal drain through the existing backend option. - Keep other providers and the caller's shorter execution bound unchanged. - Add real Runner protocol cases for prompt, delayed, and absent terminal delivery. Check retained wait state and one provider turn. - Document the bounded wait and terminal-proof requirement. ## Verification - Red: the 18-second controlled-provider case failed with `governed_wait_provider_terminal_unproven` on the old backend. The prompt case passed. - Green: 282 tests passed across the native runtime, harness backend, and new Runner protocol suite, including a repeat on the rebased PR revision. `pnpm verify --explain` returned exit 2 because the execution-contract document requires broad CI; the [required CI run](https://github.com/paperclipai/paperclip/actions/runs/42668235142) passed on the final head. All 58 applicable checks passed; the three skipped checks were the two unrelated Storybook jobs and the selected-test planner replaced by broad coverage. - The missing-terminal case still fails without `completeRun` or a successful run terminal. The saved governed wait remains available. Only one provider turn and one tool call occur. - Existing runtime tests cover shorter deadlines, foreign or unproven terminals, complete usage without a terminal, and checkpoint recovery without another model turn. - Live acceptance at `f3da2b87425d4fd45c649bfc98785c61f82abbe0`: real Runner binary, Codex CLI 0.165.0, gpt-6.1-sol, Node 26.4.0, macOS arm64, disposable local workspace. One `request_human_input` tool call returned a pending interaction fixture. The real provider emitted `turn.interrupted`; the controller accepted the yielded wait and its run terminal. The check passed in 8.14 seconds. The tool callback and persistence port were controlled; no hosted server permission or Notebook publication claim is made. - Initial local probe setup failed before model execution: first the explicit launch lacked `app-server`, then it omitted the Runner permission configuration. The successful check used the Runner's normal launch arguments and isolated home with the approved existing account. - Hosted sandbox acceptance and recovery remain unverified. The 18-second delayed shutdown is a controlled protocol regression; the live model check proves normal shutdown, not that specific latency. ## Risks - A Codex provider that never stops can occupy the settlement window for up to 15 additional seconds. It still fails closed and is quarantined. - No persisted schema, provider identity, permission, or recovery rule changes. Previous-release checkpoints use the same format and existing recovery checks. - This change cannot fix a provider that never emits a terminal. It also does not grant missing setup permissions or decide pending approvals. ## Model Used OpenAI Codex, GPT-6 family. The exact serving model ID and context window are not exposed in this session. Used reasoning, tool calls, code edits, and local execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Dotta
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a3e7e63330 |
Guard Native recovery with process-space proof and explicit containment (#19813)
## Thinking Path > - Paperclip manages agents and their work. > - Recovery must preserve execution ownership and accepted results. > - A saved PID proves nothing outside its recorded process namespace. > - Uncertain unfinished work must stay held until its original owners stop. > - Operators need a source-bound containment action and a separate ordinary Retry. > - Accepted results must use the existing finalizer without another provider turn. > - This PR keeps those paths safe, recoverable, and quiet between real obligations. ## Linked Issues or Issue Description Refs: #19713 Refs: #19591 Recovery could use a local PID to release or replace a controller from another process namespace. Connected-chat Retry also rejected successful containment on a task in `todo`. The new containment action used a broader permission than the existing owner-stop action. A later review found that result-less guards also rejected the existing accepted-result confirmation action. ## What Changed - Record and verify the controller's kernel/PID namespace. Keep unknown and foreign unfinished ownership held. Preserve independent durable stop evidence and the existing remote lease fences. - Use the shared accepted-result ownership reconciler. Bind settlement to the observed lease token, generation, boot, PID, namespace and process birth. Retain finalizer, cleanup, current-controller, live-owner and remote exclusions. - Share the remote-owner reader across recovery consumers. Scope runner leases to the same company, task and run. Do not make local PID probes for remote accepted-result ownership. - Gate original-host containment on `runtime:confirm_owner_stop`. Bind it to the current task, source, assignee, original expiry, lease and Stop state. Audit separate controller/provider containment and reviewed action outcomes. - Keep containment separate from ordinary Retry. Use one canonical committed receipt and the normal admission, budget, workspace and lineage checks. Preserve the recorded external-action outcomes. - Keep the controller-only confirmation actionable for both result-less work and accepted results. Result-less work gets its next source-bound attention in the same transaction. Accepted results keep their original result and use normal shared settlement/finalization. - Keep identity inspection quiet. Preserve the original foreign-owner expiry and use the existing scoped finalizer in accepted-result recovery controls. - Update the recovery card, validators, execution projection, docs and access maps. Reuse existing canonical columns; add no migration or ownership backfill. ## Verification Current publication head: `71ea76b568de09d6313d8992e803131d9d5c54f3`. **The current fix has a causal red/green check.** On the test-only revision, both foreign-local stopped/fenced controller cases failed because recovery probed saved runner, process-group and provider PIDs in this host's namespace. This measured the wrong probes; it did not run duplicate providers. After the fix, the same two cases passed every no-probe, no-claim, no-controller-stamp, no-stop-receipt and unchanged-authority assertion. Three existing remote preparation, grace and fenced-controller progress cases also passed. Total: **5 passed, 0 failed;170 filtered rows excluded**. All three normal affected App TypeScript programs passed on this head (660,681 and428 roots). The fix separates a controller wait from execution stop proof. Independent live/grace evidence still schedules recovery. A stopped/fenced foreign controller can pass this namespace guard only for remote execution, which keeps its later checkpoint and never-launched checks. Foreign local execution stays held before runner or provider PID inspection. Earlier source-scoped results remain evidence, not fresh executions on the current head: - On `c86dd741`, the complete failed-owner file passed **25/25**, with no skips or filters. Empty scans wrote no controller stamps. Foreign ownership kept its original expiry. Normal returned-claim settlement and attention at the exact deadline passed. - On `c86dd741`, **15 selected accepted-result/restart controls passed**. The81 filtered rows are excluded. Both completion cases used the existing scoped finalizer and kept their accepted result without another provider turn. - Trusted CI at synthetic merge `50d072a5` (actual master `1b7fe334` plus `c86dd741`) passed the complete **17-case maintenance-server file**. This includes the original90-real-second quiet observation and two qualified hourly windows. The quiet case took118,918ms. The four jobs that failed on the earlier publication all passed on that synthetic merge. - On `6243b32c`, the complete ownership-report file passed **29/29**. Native NULL namespace stayed unprovable and generic compatibility remained. Three selected recovery controls passed;170 filtered rows are excluded. - On `f81f2c3c`,356 business cases passed: whole ownership-route221, recoveryUI70, owner-proof38 and controller-confirmation8; selected accepted-result authority18; and one real connected-chat containment, separate authorized Retry, useful Native result and downstream reply case. The2,024 filtered rows are excluded. A separate earlier accepted-result causal case kept the original result and completed after restart without replay. Normal Shared exports, App programs, UI typecheck, token gates and map checks passed on their recorded revisions. Unchanged DB, adapter, Eval and Runner inputs/outputs have explicit carry proofs. The clean normal merge with fetched master `8fe524f7` preserves all31 exclusive owned paths and14,827 unrelated master entries. The nine overlapping paths were reviewed, including the upstream unidentified-run stop action. Fresh CI must validate that actual merge composition. PG cases used existing external PG17, fresh owned databases, pools at most4, one worker and no SQL observer during cases. Registered clients and recorded process groups closed. Independent final SQL audits found zero campaign sessions before normal database cleanup. Original failing fixtures remain retained. Original failures are preserved. One new test first failed compilation due to a missing getter import; an import-only correction passed its full owning programs before the causal red/green check. A local quiet attempt stopped in the normal prerequisite hook before any business case and its collector rejected two normal build markers. The later17-case CI pass establishes quiet recovery; it does not turn that failed local collector into a pass. An earlier useful case passed before its private cleanup collector failed on an owned read-only directory; normal cleanup completed after all owners closed. Earlier runner-shutdown cancellation and a separate private whole-suite failure remain unexplained. Current-head checks are complete:57 success,1 neutral and3 skipped, including the successful aggregate CI gate. The legacy status passed. Greptile is5/5 and Ponytail gives an explicit5/5 Ship verdict for this head. All seven review threads are resolved. Full recursive typecheck, the full test suite and release build were not repeated locally. No result here proves deployed suspension, a live provider or termination on another host. ## Risks - Unknown physical ownership can require an owner/admin action. A false containment statement can be unsafe. - New work, reassignment, Stop, renewed authority, accepted results or pending cleanup can invalidate an action. The operator must refresh. - Controller confirmation does not prove provider/tool containment. Completed external actions must not be replayed. - Generic legacy and child-process compatibility remains separate from the strict Native controller policy. - Existing saved state and canonical schema are preserved. Permanent safety refusals remain held with their normal named recovery path. ## Model Used OpenAI `gpt-6.1-sol` agents implemented and tested the changes with reasoning, repository tools and code execution. A GPT-6-based Codex managing agent reviewed and integrated them. The host does not expose the manager's exact build or the context-window sizes. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes: #` / `Refs: #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge |
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DottaandClaude Opus 5.5
|
8fe524f796 |
fix(issues): let the board confirm an unidentified run stopped instead of an endless Retry wait (#20310)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Before a new attempt can start on a task, Paperclip must prove the previous run's agent stopped, so two agents never work the same task at once > - A local native run can be interrupted after it asked to start the runner but before it recorded the runner's process. The runner may have saved state and started a provider, and provider processes can outlive it, so the existing check (#19694) rightly refuses to assume the run stopped > - Today that case has no way out: every Retry is accepted and then waits forever as `process_identity_missing` (storage chaos ST1, t02/t03) > - This pull request makes the wait explicit and actionable. The task explains why it waits, and a board operator who has checked can confirm the run stopped; the parked Retry then starts at the click > - A second shape from the Daytona storage baseline (t06) parked a Retry with no reason at all: a follow-up was interrupted by a graceful shutdown while it was still restoring its workspace. No provider ran, but the restore hold kept the same agent held, so the Retry never started > - The benefit is that no Retry stays accepted-and-waiting with nothing anyone can do ## Linked Issues or Issue Description Refs #19831. Storage chaos wave `w-20261109T145628-s9902` (ST1), tasks t02 and t03. **What happened (CHA-3, run `3c3f6241`):** - The run requested a runner launch (`native.process_start_requested`), and a K2 restart hit before its process identity was recorded. - After the restart, the resumed attempt failed on the storage outage. The task was blocked. - The board's Retry (202) was parked as `executionWait.reason = process_identity_missing`: "The previous run has no verified stop record." - `recordUnidentifiedLocalRunnerStop` cannot prove the stop because this run's runner saved control-plane state. Once that exists, a provider may have started (#19694), and a provider is not guaranteed to carry `--run-id` or `PAPERCLIP_RUN_ID` (the Codex provider env omits it on purpose). The shared owner prover needs a PID, which the run never recorded. - Nothing could ever clear the wait. **Daytona storage baseline `w-20261109T154810-s9911`, task t06:** - The run succeeded. The follow-up was cancelled (`continuation_task_ownership_changed`), and the next run was interrupted by a graceful shutdown (`server_shutdown_interrupted`) 3 s into `preparing`. It was restoring the saved remote workspace and had launched no provider. - Restore recovery saved the files (`workspaceRecovery.status: recovered`, system recovery `complete`). But the `legacy_execution_requires_reconciliation` restore hold releases only for a different owner, or for a native Stop fenced before any provider turn, so it kept the same agent held. - The UI Retry returned 202 and parked with `executionWait.reason: execution_recovery`, the generic wait, so the task showed a Retry that never started. Automatic proof needs the runner to record its identity before saving state and to group provider processes under it. That is follow-up runner work; this PR removes the endless wait now. ## What Changed - `server/src/services/native-local-process-stop.ts`: new `confirmUnidentifiedLocalRunnerStopped`. It accepts only a finished native run of the task with no recorded process and whose latest launch evidence is an unconfirmed launch on this host in a local environment. It still refuses while a runner with `--run-id <run>` is running. It records `native.local_process_stopped` with `basis: "operator_attested"` and the attesting user. That is the receipt the existing continuation gate already accepts. - `server/src/routes/issues.ts`: `POST /issues/:id/recovery-actions/confirm-run-stopped` (`runId`, `stopEvidence` of 20 to 12,000 characters). It is board-only and requires issue read plus `runtime:confirm_owner_stop`, like the other stop attestations. It logs `issue.run_stop_confirmed` with the evidence, promotes deferred intents for the issue, and resumes each parked task Retry, so work starts at the click. Refusals return 409 with a code. - `packages/shared`: `confirmRunStoppedSchema`, and the presentation user action `confirm_run_stopped`. - `server/src/services/task-interruption-presentation.ts`: a Retry parked as `process_identity_missing` for a native run that recorded no process now presents as waiting for the user (`canRetry: false`, `userAction: "confirm_run_stopped"`), with a message explaining why and who can act. A run with a recorded process keeps the existing verification wait. - UI: - `ExecutionBlockerNotice` shows the explanation and, for users who can confirm a stop, "Confirm it stopped" with a short evidence form. - It reuses `PreviousServerStopConfirmation`, now with optional `action`, explicit `runId` and `formId`, and a custom button label. - The Inbox names the action. - `server/src/services/execution-blocker.ts`: `interruptedPreparationBeforeProviderWorkCondition`. The restore hold also releases for the same agent when the stopped run was a system-interrupted preparation (legacy runtime never resolved, still `preparing`) with no process identity, no runner or provider events, no finalization or result, and every lease released with a confirmed stop. It mirrors the existing interrupted-preparation proof and still requires the completed workspace-recovery receipt. Auto-replay is unchanged; this only lets the user's Retry or message start. - Review fixes: - `unidentifiedLocalLaunchRefusal` holds the endpoint's launch, host and lease checks, and the presentation offers `confirm_run_stopped` only when it passes. - The attested stop wakes cost accounting in the same transaction. - The confirmation form is keyed by task and run. - The route is registered in OpenAPI. ## Verification Red/green (each new test fails against master and passes with this PR): - `server/src/__tests__/issue-confirm-run-stopped-routes.test.ts`: - The parked Retry presents `confirm_run_stopped` with the explanation. - Confirming records the operator-attested stop and the activity entry, satisfies the stop check, and resumes the parked Retry: its receipt is coalesced into a newly started run. - It refuses with 409 while a runner for the run is running. - Agents and viewers get 403. - `ui/src/components/ExecutionBlockerNotice.confirm-run-stopped.test.tsx`: the notice offers "Confirm it stopped" (and no dead Retry) and posts the run and evidence. A viewer sees the explanation without the action. - `server/src/__tests__/interrupted-preparation-restore-retry.test.ts` (t06 shape): - The restore hold no longer blocks. - A Retry is accepted and resumed into a started run, and the audit hold keeps `replay: blocked`. - The hold stays when a provider turn started, when a runner event was recorded, when an operator stopped the run, or when the sandbox has no stop receipt. - `issue-confirm-run-stopped-routes.test.ts`: - A case per refusal code checks the presentation keeps the generic wait and the endpoint returns 409. - An `alreadyStopped` case. - An accounting-wake assertion. - The UI test switches targets with stale evidence. Regression and static checks: - `ExecutionBlockerNotice`, `WorkspaceExportRecovery` and its control tests: 74 passed. - `tsc --noEmit` passes for `packages/shared`, `server` and `ui/src`. `pnpm check:token-gates` is clean. ## Risks - A board operator can now attest that an unidentified run stopped. The attestation is permission-gated, requires written evidence, is activity-logged, and is refused while a runner for the run is visibly running. A wrong attestation could start a second agent beside an orphaned provider, the same trust model as the existing previous-server attestations. - The confirmation component now accepts a run without a recovery action. Existing callers pass the action as before. - No schema migration. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with tool use (shell, file edits). ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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DottaandPaperclip
|
ff2d463eed |
feat(cli): manage agent grants and keep remote login on the public origin (#20323)
## Thinking Path
> - Paperclip lets people control their AI agents and permissions.
> - Remote operators need a browser-approved CLI login.
> - Proxies can send that login's approval link to an internal host.
> - Human member commands cannot grant an agent an explicit permission
such as commentary:view.
> - This change keeps approval on the canonical public origin and adds
Board-only single-grant commands.
> - The API checks company access and permission-management authority
and records each change.
> - An operator can sign in, grant one agent permission, and preserve
the agent's other grants.
## Linked Issues or Issue Description
**What happened?**
A proxied CLI login returned an approval URL on the upstream host. The
signed-in browser was on the public host. The CLI also had no command to
add an arbitrary explicit agent grant: member commands manage human
members, while agent permissions:update exposes fixed configuration
fields.
**Expected behavior**
Approval uses the configured canonical public origin. A Board operator
with users:manage_permissions can grant or revoke one explicit agent
permission without replacing other grants or activating an inactive
membership.
**Steps to reproduce**
Configure a public auth origin. Create a CLI challenge through a proxy
that replaces forwarded-host headers. Inspect the approval URL. Then try
to grant commentary:view to an agent through the CLI.
## What Changed
- Use the existing public-origin resolver for CLI approval URLs.
- Add agent permission:grant and permission:revoke commands.
- Add PATCH /api/agents/{id}/permission-grants with strict shared
validation and Board-only OpenAPI metadata.
- Serialize each mutation on the agent row. Preserve unrelated grants
and membership state. Commit the grant and its activity record together
and publish activity after commit.
- Document remote login and single-grant management.
## Verification
- The new approval-link regression failed before the fix and passes
after it.
- All 25 CLI auth route tests pass.
- All 72 affected CLI, login and OpenAPI tests pass.
- All 5 PostgreSQL grant tests pass, including actual commentary reads
(403 before grant, 200 after grant, 403 after revoke), preservation,
audit attribution, concurrent additions, invalid inputs, inactive or
missing membership, agent self-grants, cross-company denial, and
rollback on audit failure.
- Shared and CLI typechecks and server declaration-layer checks pass.
- pnpm verify requests broad CI coverage because doc/CLI.md is a global
verification input. Greptile reviewed final head
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DottaandClaude Opus 5.5
|
97188f276c |
perf(runner): skip the turn-end provider restart in a per-turn Runner (#20312)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work
> - The Paperclip Runner runs each agent's provider (for Claude, an ACPX
sidecar) and keeps its session across runs.
> - #20190 restarts the ACPX provider when a turn settles, so a warm
follow-up does not pay the respawn on its critical path.
> - A per-turn Runner (`lifecycleMode: per_turn`, the default) exits
with its run. Nothing reuses the generation that restart prepares: the
next run starts a new Runner process and loads the session again.
> - In that mode the restart can only spawn a provider for teardown. On
a loaded host it can also fail, which was the cause of the closed
sessions that #20285 fixed.
> - This pull request skips the turn-end restart when the controller
launched the Runner as per-turn.
> - The benefit is that per-turn runs never spend a provider spawn they
cannot use, and never risk a restart failure at the end of their run.
## Linked Issues or Issue Description
Refs #20190, #20285
**What happened?**
A per-turn Runner restarted its ACPX provider after its turn settled,
although the Runner exits with its run. The next run launches a new
Runner process (`runner.process.launch mode=resume`, then
`provider.session.load`), so the restarted generation is torn down
unused. In an earlier A/B on a host with load average about 17–27, this
restart fired and failed, and the failure closed the session (fixed in
#20285).
**Steps to reproduce**
1. Run a Claude task with the default per-turn lifecycle.
2. Let the turn settle and the controller acknowledge its events before
it shuts the Runner down (more likely on a loaded host).
3. The Runner reaps the provider, spawns a new generation, and then
exits with the run, which reaps the new generation too.
**Expected behavior**
A per-turn Runner does not restart its provider after its turn. A warm
Runner keeps the #20190 restart. A later turn of the same run still
restarts the provider at its start.
## What Changed
- `DurableRunnerConfig` has a new `turn_scoped` field.
- `paperclip-runnerd` sets it from `--lifecycle-mode`, which the
controller already passes (`durable-prp-control-plane.ts` pushes
`--lifecycle-mode <mode>`), but which `runnerd` ignored until now. Only
`per_turn` sets it. `warm`, and launches without the flag (older
controllers), keep today's behavior.
- `NativeProviderCommandExecutor::prepare_next_turn` returns early when
`turn_scoped` is set. The lazy restart at the next turn start is
unchanged.
- Tests:
- New
`a_per_turn_runner_skips_the_turn_end_restart_and_restarts_a_later_turn_at_its_start`:
no new provider process and no sidecar command after the turn settles; a
later turn of the same run still restarts at its start
(`session.suspend`, `initialize`). It fails without the skip (2 process
starts instead of 1).
- New `only_a_per_turn_lifecycle_is_turn_scoped` for the flag parsing.
- The other `DurableRunnerConfig` literals set `turn_scoped: false`.
## Verification
- `cargo test -p paperclip-runner-core`:
- `--lib`: 602 passed.
- `--test acpx_park_preparation`: 22 passed.
- `acpx_park_readiness`: 8 passed.
- `acpx_warm_attachment`: 4 passed.
- `acpx_provider_suspend`: 5 passed.
- `acpx_provider_session`: 12 passed.
- `acpx_provider_turns`: 29 passed.
- `native_provider_backend`: 47 passed.
- `durable_recovery`: 3 passed.
- `--bin paperclip-runnerd turn_scoped`: 1 passed.
- `cargo build --workspace --all-targets` passes.
- Local live A/B with `ttft-baseline --adapters claude --samples 3
--restarts 0 --phases coldwarm`. Control is master after #20285
(
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DottaandClaude Opus 5.5
|
fd2e7482c0 |
fix(runner): stop a lost runnerd's provider and tools from a durable lineage journal (#20270)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work
> - A local native run uses one runner daemon (`paperclip-runnerd`).
runnerd starts the provider (for example OpenCode), and the provider
starts tool processes
> - When runnerd dies in the middle of a tool call, the provider and its
tools are re-parented. The only record of that process tree was in
runnerd's memory
> - Close then cannot prove that those processes stopped. It quarantines
the session, and the next attempt stops with
`native_session_cleanup_quarantined`: "Automatic recovery stopped /
operator recovery required"
> - Restarts and runner loss are product failures. Interrupted work must
recover by itself, and it must never get two writers in one workspace
> - This pull request makes runnerd journal its process lineage to disk,
and makes close stop and prove gone every journalled process after
runnerd is lost
> - The benefit is that a killed runnerd leads to an automatic, safe
retry within the normal attempt budget, instead of an operator stop
## Linked Issues or Issue Description
Refs #20259 (runner loss classification and the lineage sampler panic).
Refs #20260 (automatic continuation of an inert cleanup quarantine).
**What happened?**
A chat eval killed only the owned local `runnerd` process (SIGKILL)
during an OpenCode tool call
(`chat-features.runner-opencode.local.recovery.retry-exhausted`,
`recovery.explain-stall` and `recovery.source-action`). Attempt 1
recorded `native_runner_process_exited` with "Retry scheduled 1/3".
Attempt 2 stopped with `native_session_cleanup_quarantined`. The task
was blocked with no owner, and the next action was operator recovery.
**Expected behavior**
After runnerd is lost, the product stops the provider and tool processes
that runnerd started, proves them gone, and continues the run within its
retry budget. When it cannot prove that, it keeps the fail-closed
quarantine.
**Steps to reproduce**
1. Start a local native OpenCode (or Codex) run.
2. Let the agent run a tool that leaves the provider's session (for
example `nohup job &`).
3. Send SIGKILL to the `runnerd` PID only.
4. Close rejects with `runner did not durably suspend before
checkpoint`, and the next attempt fails with
`native_session_cleanup_quarantined`.
**Paperclip version or commit**
master at
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DottaandClaude Opus 5.5
|
e015c2ef21 |
fix(runner): keep a Claude session resumable when its turn-end provider restart fails (#20285)
## Thinking Path - #20145 prepares the next Claude provider generation at park, and #20190 restarts the ACPX provider when a turn settles. They move the sidecar respawn off the follow-up's critical path. - When that turn-end restart fails, the runner "fails closed": `restart_session_after_turn` saves the session `closed` and drops it. Within the run, the next turn fails exactly like a failed restart at turn start. That's intended. - Across runs it breaks the conversation: - the next run's `run.attach` refuses a `closed` session ("run.attach requires the same settled ACPX provider profile and session"); - it reconnects for about 10 s; - the controller then records a continuity break and starts a fresh Claude conversation (`run.startup.reuse provider_session: fresh/created`). - A local A/B (`ttft-baseline --adapters claude --samples 3 --phases coldwarm`, on a host with load average about 17–27) confirmed it: | | |
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Nicky LeachandPaperclip
|
09412e652a |
fix(runner): allow warm release to drain after provider restart (#20290)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Warm Runner sessions park after a turn so follow-up tasks can claim the same process. > - Claude restarts its ACPX provider after the controller receives the terminal result. > - That restart can delay the drain receipt beyond the release path's one-second limit. > - A failed drain prevents parking, so the idle timer later closes the retained Runner. > - This pull request uses the existing warm admission budget for release drain. > - The benefit is retained Runner reuse without moving provider restart onto task dispatch. ## Linked Issues or Issue Description Fixes: #20225. Refs #20190 and #20145. Related performance follow-up: #20224. ## What Changed - Align the release drain timeout with the existing 30-second warm admission budget for every provider. Close paths keep their explicit remaining deadlines. - Keep the existing immediate completion when the drain receipt proves settlement. Add no sleep, retry, provider branch or dispatch work. - Add a real Runner regression with a fake ACPX sidecar whose replacement start takes 1.5 seconds. One release call must park the Runner, then a follow-up must claim the same Runner process. - Document the release drain budget. ## Verification - Targeted command in `packages/paperclip-runner`: `vitest run src/live/runnerd-codex-transport-release-resume.test.ts src/live/runnerd-codex-transport-settlement.test.ts src/live/runnerd-codex-transport-deadlines.test.ts`: **46 passed** across 3 files, 157.78 seconds. - Independent parent verification reran the slow-restart and ordinary cached cases: **2 passed**. Source review confirmed that release is the only caller using the changed default; close callers supply explicit deadlines. - Negative control: with the original one-second timeout, the new test fails because the single release call returns `false`. The fixed code passes the new case. - Built only the current-source Runner and two fixture binaries required by these tests. The first sandboxed invocation could not bind its loopback listener (`EPERM`); the test ran with loopback access afterward. - Full GitHub PR workflow [42644210993](https://github.com/paperclipai/paperclip/actions/runs/42644210993) passed on head `9cfda0927b514d8d40443b612afa92525b35b700`. Standard Greptile scored this same head 5/5 with no review threads. Full repository checks ran in GitHub CI, per the requested local test scope. No live Claude session or hosted deployment was tested. ## Risks - An unresponsive Runner can now hold release drain for up to the existing 30-second warm admission limit. A healthy Runner returns as soon as its receipt arrives. The provider restart stays at turn end; task dispatch gets no fixed delay. - Saved state, protocol and provider identity formats do not change. Previous-release state carries forward under the existing validation. - The controlled fake-sidecar test proves the restart timing race and process reuse. It does not qualify live provider latency or a hosted rollout. ## Model Used - OpenAI GPT-6 through Codex, with repository tools, code editing and targeted test execution. The exact serving revision and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandClaude Opus 5.5
|
1b09920a64 |
fix(issues): refuse agent status changes that detach another run's live execution (#20271)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - A task that an agent run executes holds a checkout lock and an execution lock (`checkoutRunId`, `executionRunId`) > - A status change away from `in_progress` clears these locks. It does not stop the run that holds them > - Agents cannot stop another agent's run: run cancel and the task-tree pause are board-only > - But an agent that can edit a task (for example a lead with the manage-active-checkouts grant over its report) can change its status. The run then keeps running and is no longer bound to its task > - In chat evals, a lead "paused" a launch tree. It moved running subtasks to backlog. The runs kept running, detached > - This pull request refuses an agent's status change when a different queued or running run holds the task's lock. The denial is final, links the task, and names the person's controls > - The benefit is that agents cannot interrupt another agent's run through a status edit, and runs are not left orphaned ## Linked Issues or Issue Description Refs #20261 (chat guidance sends a task-tree pause to the person's Pause subtree control). Refs #19394 (resume restarts the work a subtree pause interrupted). **What happened** An agent changed the status of a task while another agent's run executed it. The request succeeded. The server cleared `checkoutRunId` and `executionRunId`. The run continued, but it was no longer bound to the task. In the chat evals `steering.stop-versus-pause` and `task-coordination.pause-tree`, a lead moved running subtasks to backlog to "pause" a launch. Their runs kept running, detached. **Expected behavior** An agent cannot get the effect of interrupting another agent's run. When a different live run holds the task's lock, the agent's status change is refused before any write. The refusal says it is final. It sends the person to the task and names the controls that really stop or hold the work: the run's Stop or Interrupt, or More task actions, then Pause subtree on the parent task. The lock-holding run, board users, and paths that stop the run themselves continue to work. **Steps to reproduce** 1. Create agent A and agent B, with B reporting to A (A gets `tasks:manage_active_checkouts` through the manager chain). 2. Give B an `in_progress` task. Set `checkoutRunId` and `executionRunId` to a `running` heartbeat run of B. 3. As A (agent JWT with its own run), send `PATCH /api/issues/:id` with `{ "status": "backlog" }`. 4. Before this change: `200`, the status is `backlog`, both lock fields are `null`, and B's run is still `running`. ## What Changed - `server/src/routes/issues.ts`: new `assertAgentStatusChangeKeepsLiveRunBound`. For an agent actor, it refuses a status change when `executionRunId` or `checkoutRunId` names a different run in the same company that is `queued` or `running`. It runs in `PATCH /issues/:id` after the final status and assignee are known (execution-policy transitions included) and before any run stop or write. It also runs in recovery resolution when the source status changes. - The guard applies to any status other than `in_progress`, also to the current status, because the service clears the locks for those too. - The write is conditional on the lock the guard checked. The route re-reads the lock and passes it to `svc.update` as `expectedExecutionLock`. The service compares it under the row lock and returns `409 issue_execution_lock_changed` if a checkout landed in between. - These cases stay allowed: the lock-holding run itself, board users, requests with no status, a change to `in_progress`, `cancelled` (the route cancels the run), reassignment (the route stops the run first), `done` through PATCH while a Runner goal is active (terminalization pauses the goal and stops the run; recovery resolution does not get this exception), and a lock holder that already finished. - `packages/shared/src/issue-write-denial.ts`: new denial code `issue_status_change_live_run` (409). The copy says the refusal is final, links the task as `[identifier](/prefix/issues/identifier)`, and names Stop or Interrupt and More task actions, then Pause subtree. A new optional `issuePath` context field carries the link. The UI notice renders it through the existing generic path. - `doc/SPEC-implementation.md`: documents the rule in the checkout contract section. - Paths checked with no change needed: there is no bulk issue update route; tree holds and run cancel are board-only; `POST /issues/:id/release` already lets only the assignee's checkout run release; API-catalog actions call the same PATCH route; MCP status changes already refuse with `MCP_ACTIVE_EXECUTION`. ## Verification - Red on master, green with this change: - `server/src/__tests__/issue-stale-execution-lock-routes.test.ts` (embedded Postgres, real issue service): a manager moves its report's running task to backlog. On master: `200`, status `backlog`, `checkoutRunId`/`executionRunId` changed to `null`. With the fix: `409 issue_status_change_live_run`, row unchanged, run still `running`. - `server/src/__tests__/issue-agent-mutation-ownership-routes.test.ts`: refusals for `backlog`, `todo`, `blocked`, `in_review`, `done`, a queued lock holder, and a repeated current status (red on master). Allowed cases: field edits, the lock-holding run, board, `cancelled` (run is cancelled), and finished lock holders; an allowed change carries `expectedExecutionLock`. - Same embedded-Postgres file: `svc.update` with an `expectedExecutionLock` that differs from the row returns `409 issue_execution_lock_changed` and leaves the row unchanged. - Also passed locally: `issue-closed-workspace-routes`, `issue-comment-reopen-routes`, `issue-recovery-actions`, `issue-scheduled-retry-routes`, `low-trust-red-team-routes`, `issue-update-comment-wakeup-routes`, `external-object-routes`, `packages/shared` `issue-write-denial`, `ui` `IssueWriteDenialNotice`. - `tsc --noEmit` shows no errors in the changed files. Full typecheck, build and test are left to CI. ## Risks - Behavior change for agents: a lead or CEO that used status edits to take over a report's running task now gets a 409. The supported paths (comment, cancel, reassign, or the person's Stop or Pause subtree) still work. - A queued run that holds the lock also blocks the change. This is deliberate: the queued run would otherwise start later with no task bound to it. - Agents can still cancel another agent's run by cancelling its task. That is existing, documented behavior ("task cancellation cancels the intent"), and this PR does not change it. ## Model Used - Anthropic Claude Opus 5.5 (`claude-opus-5-5`), via Claude Code with tool use (shell, file edits, test execution). ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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DottaandClaude Opus 5.5
|
3374ca54f5 |
fix(runner): record a runner exit mid-turn as runner loss, and stop the lineage sampler panicking (#20259)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The native runner (`runnerd`) runs each provider turn, and the server records why a run stopped and what the person can do next > - When `runnerd` exits during a provider turn, the server saved the run as `native_provider_terminal_failed`: "The provider session is permanently unusable", with automatic retries stopped > - The real cause was the runner process, and the transport already names it (`native_runner_process_exited`) at the start of the closed-stream message > - Separately, the process-lineage sampler added in #19727 panicked on Linux debug builds when a provider tool started its own session, and that panic text became the run's visible failure > - This pull request records a runner exit mid-turn as runner loss, and reads session IDs without the assertion that panicked > - The benefit is that a person sees the true cause of a stopped run, and recovery treats a lost runner like every other runner exit ## Linked Issues or Issue Description Refs #19727 **What happened** A chat eval killed only the owned `runnerd` process (SIGKILL) while a provider tool was running. The run failed with `errorCode: native_provider_terminal_failed` and the next action "The provider session is permanently unusable". The error text was `Notification transport failed closed: native_runner_process_exited: runnerd exited unexpectedly: paperclip-runnerd panic: panicked at rustix-1.1.4/src/pid.rs:61:9: assertion failed: raw > 0`. The panic came from the lineage sampler thread before the kill. It called `rustix::process::getsid`, which asserts a nonzero session. A kernel thread, or a process whose session leader is outside the PID namespace, reports session 0. **Expected behavior** A runner process exit is recorded as `native_runner_process_exited`, the same cause the server already uses for a runner exit outside a turn. Recovery then applies its normal runner-loss rules (checkpoint evidence, bounded attempts, cleanup quarantine). The lineage sampler does not panic, and its diagnostics do not replace the real failure text. **Steps to reproduce** 1. Start a native OpenCode run on Linux with a debug `runnerd`. 2. Let the agent run a shell tool that starts its own session (for example a long `node -e` command). 3. Send SIGKILL to the `runnerd` PID only. 4. Read `GET /api/heartbeat-runs/<runId>`: `errorCode` is `native_provider_terminal_failed` and the error names the rustix panic. ## What Changed - `nativeSessionFailureSourceCode` returns `native_runner_process_exited` for a `NativeProviderTerminalFailure` with code `notification_transport_failed` when its message starts with `Notification transport failed closed: native_runner_process_exited: `. Only the runner transport writes that prefix. Other closed-stream causes stay `native_provider_terminal_failed`. - `paperclip-process-table` has a new `session(pid)` function. Linux reads the session field of `/proc/<pid>/stat`. macOS calls `getsid`. A session of 0 or an error gives `None`. - `process_lineage` reads sessions through `paperclip_process_table::session` instead of rustix `getsid`. - Regression tests: the runner-loss classification (attempts 1 and 3, and three negative shapes), the stat session parser with a kernel-thread line, and a live read of this process's session. ## Verification - `cd server && npx vitest run src/services/native-runtime/native-session-executor.test.ts -t "runner process exit that closed|preserves stable provider and runner|model rejection from a provider terminal|operator-owned through terminal"` (8 passed) - `cd packages/paperclip-runner/runner && cargo test -p paperclip-process-table` (macOS: 3 passed; the Linux-only parser tests run in CI) - `cd packages/paperclip-runner/runner && cargo test -p paperclip-runner-core --lib process_lineage` (6 passed) - End to end: the `recovery.*` chat eval cells that kill `runnerd` are run against this change on a separate eval branch. ## Risks - Behavior shift: a runner exit during a turn now follows runner-loss recovery instead of stopping as a permanent provider failure. Recovery still decides from durable evidence. Ambiguous state stays terminal, and an unverified cleanup stays quarantined. - Previous-release story: no persisted shape changes. Runs saved earlier with `native_provider_terminal_failed` keep that code. Only new failures are classified with the new rule. - The session read on Linux now uses `/proc` instead of a syscall. It gives the same value, and it reports 0 (now `None`) in the same cases. ## Model Used - Anthropic Claude Opus 5.5 (`claude-opus-5-5`), via Claude Code with tool use (shell, file edits). ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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DottaandClaude Opus 5.5
|
8eb11fa8aa |
fix(runner): fail closed with a recorded cause when runner event commits stall (#20235)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - A Runner streams numbered events to the control plane, which commits each one and acknowledges the committed prefix > - In restart chaos wave `w-20261109T093417-s9807`, t01 (claude R1, local), the control plane never committed Runner seq 34. Every failure path in `#event` closed the connection without recording why. The Runner reconnected 2,848 times over 14 minutes and nothing detected it > - This pull request makes that loop a detected, named failure that carries its cause > - The benefit is that a wedged event stream becomes a visible run failure with a reason, instead of a silent "running" task ## Linked Issues or Issue Description Refs #19831. Restart chaos wave `w-20261109T093417-s9807` (master `df4562ab38`), task t01, run `d08dc899`. **What happened** (Phase 2's re-check of the kept instance): - The provider kept working. Claude's transcript runs to 09:47:03 and ends in `paperclip_finish`. - The Runner, its ACPX provider state, and the controller journal agree on acked seq 33. The controller never commits Runner seq 34 (Write progressed, 09:36:25.892). - Phase 2 replayed the kept outbox offline. Runner seq 34 fails `validatePrpEvent`: its `/payload/target` contains a newline from a malformed Claude Write call. `#event` closes without a reason, and the Runner redelivers the same bytes forever. (Phase 2's separate PR stops the producers from emitting such paths.) - Every `#event` failure path closed the connection without recording a reason, so the cause was invisible. An outbox that already holds such an event can only be cleared by failing closed. - The `<instance>:<run>:N` ids in `heartbeat_run_events` come from the TS driver's own projection numbering, so there was no Runner sequence rewind. ## What Changed - `packages/paperclip-runner/src/control-plane/durable-prp-control-plane.ts`: - `#eventCommitFailed` replaces the bare `connection.close()` on each `#event` commit-failure path. It records a bounded cause: `event_sequence_mismatch` for an out-of-order event, `event_schema_invalid:<issue paths>` for an event that fails `validatePrpEvent`, the error's code or name (never its message) for a commit callback error, `journal_sequence_not_contiguous`, `journal_commit_refused`, or `checkpoint_flush_failed:<cause>`. - If failures continue for the same run at the same acknowledged cursor for at least 20 attempts and 45 s, it fails closed with `NativeSessionProtocolIntegrityError("runner_event_commit_stalled", "<cause> at source seq N")`, where N is the failing event's own sequence. Only a moved acknowledged cursor counts as progress (a replayed, already acknowledged duplicate does not), and a different run starts a fresh counter. A single transient failure still just reconnects, as before. - A checkpoint flush that fails before any outbound frame also counts, as `checkpoint_flush_failed:<cause>`. That includes the authentication challenge and the welcome, so a reconnect that cannot even authenticate still reaches the bound. - A journal write that throws (`#store.commit`, `#store.commitEvent`, or the welcome save) leaves the store unwritable until reload, so it fails closed at once with `journal_write_failed:<code>`. - `packages/paperclip-runner/src/contracts/native-session-backend.ts`: new reason `runner_event_commit_stalled`, with an optional `detail` in the message. ## Verification Red/green: - "bounds commit-stall reconnects for an out-of-order event": a schema-valid event with the wrong `sourceSeq` fails closed with `event_sequence_mismatch at source seq 5`. Before this it closed silently forever. "… for 20 failures inside 45 s" pins the time bound: 20 failures over 19 s do not fail closed. - "fails closed when checkpoint storage keeps failing before a reconnect authenticates": with checkpoint persistence refusing (`ECONNREFUSED`), 20 reconnect attempts fail before authentication, then the control plane fails closed with `checkpoint_flush_failed:ECONNREFUSED at source seq 1`. Without this, those attempts close silently. - "fails closed at once when the journal cannot record a runner event": a journal write throwing `ENOSPC` fails closed with `journal_write_failed:ENOSPC at source seq 1`, and the private error text is not carried. On master the connection only closes. - `durable-prp-control-plane.test.ts` "fails closed with the schema issue when the runner keeps redelivering an invalid event (restart chaos t01)": an event that fails `validatePrpEvent` is redelivered 20 times over 57 s of mocked clock. On master the control plane only closes; with this PR it fails closed with `runner_event_commit_stalled` and detail `event_schema_invalid:/… at source seq 1`. - `durable-prp-control-plane.test.ts` "fails closed when runner events keep failing to commit without progress": 20 reconnects over 57 s of mocked clock, each commit failing with `ECONNRESET`. On master nothing fails closed. With this PR the 20th failure reports `runner_event_commit_stalled` with detail `ECONNRESET at source seq 1`, and the private error message is not carried. File: 201 passed, including the existing "keeps a non-typed commit failure retryable" cases. Static checks: - `tsc --noEmit` passes for `packages/paperclip-runner` and `server`. The server is unchanged. ## Risks - Storage that keeps failing event commits for at least 45 s and 20 attempts now fails the run (operator recovery) instead of looping silently. Shorter outages are unchanged. - The recorded cause is a code or error name only, never error text, so no tool content or credentials reach the run error. - No schema change and no change to persisted state formats. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with tool use (shell, file edits). ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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DottaandClaude Opus 5.5
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3f2a940d5b |
fix(runner): answer held Paperclip tool calls after a local restart before the next turn (#20227)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - When a restart interrupts a turn, the Runner keeps each Paperclip tool call the model made as "held" until Paperclip answers it, and it refuses to start the next turn while any call is held > - Paperclip answers held calls after a reattach through its tool recovery path. That path was wired only for remote runners > - In restart chaos wave `w-20261109T084023-s9403`, t101 (local codex, K2 then K1) held a `read_document` call that nothing answered, so the continuation's `turn.start` failed and the task needed a Retry > - This pull request wires held-call recovery for local runners too, and makes `turn.start` answer or wait for held calls first > - The benefit is that a turn lost to a restart no longer strands the run behind one unanswered call ## Linked Issues or Issue Description Refs #19831. Restart chaos wave `w-20261109T084023-s9403` (master `fc5c79a327`), task t101 (codex C1, K2, local). **What happened:** - Run `4b5810d5` called `read_document` (`exec-ac8fa9b4`) around the K2 drain at 09:08:18. A K1 then killed the next server start. - At 09:08:36 the third controller reattached. The Runner restored the conversation and reported the old turn lost (`provider_turn_lost_on_restore`, recoverable). The held call stayed pending, by design: a held call accepts a late result. - The controller had the call: the quarantine detail lists `exec-ac8fa9b4` under `semanticTools.pending`. But `recoverPendingSemanticInputs()` returned at once: for a local run `controllerPersistence` is unset, so `recoverSemanticToolInput` was `undefined`. - At 09:08:46 the continuation's `turn.start` failed with "cannot prepare the next provider turn while tool calls are active (pending: 1 [read_document:exec-ac8fa9b4…])". The run ended `native_session_interrupted`. ## What Changed - `server/src/services/native-runtime/native-session-executor.ts`: the runnerd transport now always gets `recoverSemanticToolInput`, not only when `controllerPersistence` (remote) is set. It uses the same epoch check and `SessionAuthorityEpoch.recover`. Recovery re-authorizes and re-runs reads, and replays receipts for mutations; it never repeats an uncertain mutation. - `packages/paperclip-runner/src/live/runnerd-codex-transport.ts` (`#startTurnWork`): when the control plane has unsettled semantic inputs, it runs `recoverPendingSemanticInputs()` before queueing `turn.start`, and waits for that pass, bounded by the turn-start deadline. Recovered results are queued as commands ahead of `turn.start`, and the Runner applies commands in order. If recovery has not finished by the deadline, the turn start fails with `native_turn_start_held_tool_calls_unresolved` instead of sending `turn.start` behind it. When everything is settled there is no wait, so a normal turn start is unchanged. Live calls of a turn being replaced are not waited on; the replaced start still rejects them. - `packages/paperclip-runner/src/control-plane/durable-prp-control-plane.ts`: `recoverPendingSemanticInputs()` passes are serialized. A call made while the startup pass is still answering a held call waits for that pass, then runs its own, so the turn-start gate cannot finish early by skipping a call that is already being recovered. ## Verification Red/green: - `native-session-executor.test.ts` "answers a local run's held Paperclip tool calls after a restart (restart chaos t101)". On master `recoverSemanticToolInput` is `undefined` for a local run; with this PR it is wired. - `runnerd-codex-transport.test.ts` "answers a held call before starting the next turn (restart chaos t101)", against real runnerd and fake Codex, with a slow startup recovery pass already in flight when `turn/start` arrives. On master `turn/start` never ran recovery, and without the serialization `turn.start` is queued before the held call's result. With this PR the held call is recovered once and its result is queued before `turn.start`. Regression and static checks: - `runnerd-codex-transport.test.ts`, `durable-prp-control-plane.test.ts`, `runnerd-codex-transport-adoption.test.ts`: 510 passed. - `native-session-executor.test.ts` and `native-session-resume.test.ts`: 1368 passed, 1 failed. The failing case, "archives a damaged prior epoch … with real runnerd", fails identically on master on this Mac (`ENOENT … authority-epochs`), so CI is its reference. - `tsc --noEmit` passes for `packages/paperclip-runner` and `server`. ## Risks - Local runs now recover held calls after a reattach, as remote runs already did. Reads re-run under current authority. A mutation without a saved receipt still returns no result and stays held, as before. - `turn.start` may now wait up to its existing deadline while a recovery pass runs, then fails clearly if it has not finished. It never waits when nothing is unsettled, so normal turns get no added latency before `turn.start`. - No schema change and no change to persisted run state formats. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`), Anthropic, via Claude Code with tool use (shell, file edits). ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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DottaandClaude Opus 5.5
|
465da4227a |
fix(runner): drop a tool target path that breaks a line so the controller can acknowledge its event (#20238)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work
> - The Paperclip Runner turns provider tool calls into durable PRP
events. The controller acknowledges each event only after it validates
and commits it.
> - The controller's event schema forbids line terminators in a safe
path such as `tool.execution` `target`.
> - The ACPX sidecar and the Rust runner accepted a location path that
contained a newline. Claude sometimes emits a malformed Write call that
puts the file content into the path.
> - The controller refused that event without an acknowledgement. The
runner redelivered the same bytes, and the run stopped making progress
for 14 minutes (2,848 reconnects).
> - This pull request makes both producers drop such a path, so the
event carries a null target and the controller accepts it.
> - The benefit is that a malformed provider path can no longer wedge a
run's event delivery.
## Linked Issues or Issue Description
**What happened?**
In restart-chaos wave seed 9807 (claude, R1, local), the run stopped
receiving events after runner source seq 33. The runner reconnected
2,848 times in 14 minutes. Offline replay of the saved runner outbox
through the controller's `validatePrpEvent` showed that seq 34 fails
`/payload/target` (the safePath pattern), because the target is
`packages/shared/src/chaos/slug-2c5c3c8f.ts\n<parameter
name="content">export function chaosSlug…`. Seq 35, 39 and 40 (the same
tool call) fail the same way.
**Expected behavior**
The runner never emits an event that the controller's schema refuses. A
malformed tool path becomes a null target, and the tool event still
arrives.
**Steps to reproduce**
1. Have an ACPX provider send a tool call whose location path contains a
newline (for example, a Write call with the content in the path).
2. See that the runner emits `tool.execution.progressed` with that
target.
3. See that the controller closes the connection without an
acknowledgement on every redelivery.
**Paperclip version or commit**
master at
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DottaandClaude Opus 5.5
|
d2fe85e57c |
fix(secrets): delete a secret that a binding proposal referenced (#20193)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Agents can propose a secret binding. A person approves or rejects it on a review card. > - Each binding proposal row refers to one source: a secret or a pending secret proposal. A check constraint enforces this. > - The secret reference used `ON DELETE SET NULL`. When a person deletes the secret, Postgres sets the reference to null. The check constraint then rejects the row. > - So a person cannot delete any secret that a binding proposal ever referenced. The API returns 500. > - This pull request deletes the proposal rows together with the secret, as the other source reference already does. Before the delete, it rejects pending proposals so their cards close with a reason. > - The benefit is that secret deletion works again and no review card points at a removed proposal. ## Linked Issues or Issue Description Refs #15644 (related: block secret deletion while bindings still exist). **What happened** `DELETE /api/secrets/:id` returned 500 for a secret that a binding proposal referenced. The server log showed `new row for relation "company_secret_proposals" violates check constraint "company_secret_proposals_shape_check"`. This happened for pending, rejected and approved proposals. It also happened after the person removed the agent's binding. **Expected behavior** The person can delete the secret. Proposals that referenced it go with it. A pending review card closes as rejected and tells why. **Steps to reproduce** 1. An agent proposes a binding for an existing company secret (`POST /api/agents/me/secret-proposals` with `secretId`). 2. Approve or reject the proposal, or leave it pending. 3. Delete the secret with `DELETE /api/secrets/:id`. 4. The response is 500 and the secret stays. ## What Changed - `packages/db`: `company_secret_proposals.secret_id` now uses `ON DELETE CASCADE`, the same as `secret_proposal_id`. Migration `0452_secret_proposal_secret_cascade.sql` replaces the foreign key (`DROP CONSTRAINT IF EXISTS`, then `ADD CONSTRAINT`). - `server/src/services/secrets.ts`: `remove` accepts an optional `beforeDelete` hook. The hook runs after the secret is marked deleted and before its row is removed. - `server/src/services/secret-proposals.ts`: new `rejectPendingBindingsForSecret`. It rejects pending binding proposals for a secret with a reason and returns them. This closes their review cards and writes the normal activity entries. `createBinding` now holds the secret row `FOR SHARE` in its insert transaction and refuses a deleted secret. So no new pending proposal can start after the delete marks the secret deleted. - `server/src/routes/secrets.ts`: the delete route rejects pending proposals in `beforeDelete`. For each one it sends the normal rejection notice and wake (`notifySecretProposalResolution`), so the proposing agent continues. - `server/src/__tests__/secret-proposals-routes.test.ts`: a regression test deletes a secret with a pending, rejected and approved binding proposal through the route. It checks the secret and proposal are gone, the card status is correct, and only the pending case sends one rejection notice and one wake. A second test checks that a binding proposal for a secret that the delete already marked deleted fails with 404. ## Verification - Red first: the new test failed on `origin/master` with the shape-check violation for all three cases. - `cd server && vitest run --config vitest.config.ts src/__tests__/secret-proposals-routes.test.ts`: 47 passed. - `vitest run src/__tests__/chat-run-milestone-governed-work.test.ts src/__tests__/agent-secrets-routes.test.ts src/__tests__/secrets-service.test.ts`: 112 passed. - `tsc --noEmit` for `server` and `packages/db`: pass. `pnpm --filter @paperclipai/db run check:migrations`: pass. - Found by the `secrets.secret-proposal` chat evaluation. Its cleanup deletes the fixture secret and failed on this error in runs 42563093640 and 42571127911. ## Risks - The migration only replaces one foreign key. It does not rewrite rows. Existing rows already have a non-null `secret_id` or `secret_proposal_id`, so nothing else changes. - Deleting a secret now also deletes its binding proposal rows. The activity log keeps the proposal history (`secret.proposal.*` and `secret.deleted`). Secret-kind proposal rows that created the secret keep `created_secret_id ON DELETE SET NULL`, so their history stays. - Other paths that delete secrets (company deletion, user secret cleanup) now cascade instead of failing on the same constraint. They do not reject pending cards first. ## Model Used Anthropic Claude Opus 5.5 (`claude-opus-5-5`), used with tool use and code execution in Claude Code. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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DottaandClaude Opus 5.5
|
d7d0f96f3f |
perf(runner): save provider state once per poll instead of once per frame (#20217)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Native OpenCode, Codex and Cursor Cloud chat turns run through runnerd. runnerd reads provider frames in order and keeps the run's provider state in a durable file > - For every frame that it reads, runnerd rewrote the whole provider state file and called `fsync` on the file and on its directory. The state holds every tool result kept in the turn, so each save got more expensive as the turn went on > - A tool call request is just the next frame. It waited behind one full save for every frame before it. #20209 measured tool-call turnaround that grew from about 1.4 s to about 15 s in one turn > - #20209 stopped the OpenCode proxy from sending frames that runnerd discards. Every frame that runnerd still reads still paid a full save, and other proxies (for example Cursor Cloud) still send such frames > - This pull request makes runnerd save the frames of one poll once, before anything derived from them leaves runnerd. A save that would write the bytes already on disk is skipped > - The benefit is that the number of saves before a tool call no longer grows with the number of streamed frames. In a local measurement, a tool call after 400 frames with 830 KB of kept state took 0.57 s instead of more than 30 s ## Linked Issues or Issue Description Refs #20209 Related: #17514 (the same per-event full-state rewrite, on the server control-plane side) **What happened** During a native OpenCode chat turn, tool-call turnaround grew from about 1.4 s to about 15 s as the turn went on. runnerd saved its complete durable provider state, with `fsync`, after every provider frame. That state includes the tool results kept so far in the turn. A tool call request waited behind one full save for each earlier frame. **Expected behavior** The time to deliver a tool call must not grow with the number of assistant-text, reasoning or item frames that came before it. A crash or restart must still never lose state that a resumed run needs. **Steps to reproduce** 1. Start a native OpenCode (or Codex app-server or Cursor Cloud) turn that keeps a few tool results and then streams many text or reasoning frames before its next tool call. 2. Measure the time from the tool call frame to the `semantic_tool.input` event. 3. See that the time grows with the number of earlier frames and with the size of the kept state. Locally, `cargo test -p paperclip-runner-core --lib measure_streamed_frame -- --ignored --nocapture` on `master` reports 102 saves and 9.3 s for 100 frames with 830 KB of kept state, and more than 30 s for 400 frames. ## What Changed - `packages/paperclip-runner/runner/crates/runner-core/src/provider_backend.rs` and `codex_provider.rs`: - The provider frame loop moves into `poll_provider_frames`. An ordinary notification frame and a descendant notification frame no longer save the state. They mark it as unsaved. - After the loop, `poll_current_provider_with_control` saves the unsaved state once. It also saves when a frame fails, before it returns the error. - Frames that already saved at once still do so: turn terminals, Cursor Cloud terminal deliveries, `reconciliation_required`, protocol failures, MCP permission and runtime requests, process exit, and new tool calls. - A tool call that runnerd answers at once (an exact completed replay or the receipt-limit stop) saves unsaved state before it writes to the provider. A rejected tool call already saved first. - `retained_events`, `execute` and `host_park_ready` save unsaved state first, so no event, command result or park decision can expose state that is not on disk. - Courtesy rejections that `CodexProvider::poll` writes by itself (unsupported requests, descendant requests, delayed requests after a terminal, full runtime-request capacity) are held while runnerd reads a batch (`hold_courtesy_responses`). runnerd sends them only after it saves the state that covers every earlier frame (`save_before_provider_writes`). A terminal frame also saves and releases them before runnerd asks the provider for goal state or drains the accounting tail. Released courtesy replies are best-effort, as courtesy replies were before: a provider that already closed stdin cannot turn a received terminal into a polling failure. The receipt-limit stop sends held cancellations before its `turn/interrupt` request, so their order to the provider does not change. - The trace records for runnerd's normalization (`rust_durable_normalization`), which name emitted event ids, are kept until the state that holds those ids is saved. The trace therefore only names saved events. Saved mappings are written before an exited or failed provider is dropped, so they are not lost. Raw frame records still go to the trace when a frame is read; they name no event ids. - `save_unsaved_frame_state` does not write when the serialized state is byte-for-byte the same as the saved file. All other saves write as before. - Serialization moves to `serialize_provider_state`, and the file write moves to `write_state_bytes`. The write path (private temporary file, `fsync`, rename, directory `fsync`, `0600`) does not change. - New tests in `packages/paperclip-runner/runner/crates/runner-core/src/tests/provider_frame_save_batching.rs`: - `streamed_frames_do_not_multiply_durable_saves_before_a_tool_call`: 8 and 48 streamed frame pairs before a tool call need the same number of saves (1). On `master` they need 18 and 98. - `batched_frame_state_is_saved_before_events_leave_and_survives_a_restart`: at every poll, the saved file is equal to the in-memory state and holds exactly the delivered events. A new executor loads the file after the old one stops and gets the same state, the same unacknowledged events and the pending tool call. - `batched_frame_state_is_saved_when_a_later_frame_fails`: a frame that fails after 20 batched frames still leaves those 20 frames on disk. - `previous_release_state_is_rewritten_by_the_first_batched_save`: a state file in an older shape (compact JSON without newer default fields) loads, and the first batched save rewrites it. Unchanged state is not rewritten. Changed state is. - `courtesy_rejections_reach_the_provider_only_after_earlier_frames_are_saved`: when the courtesy rejection reaches the provider, the saved file (what a restarted runnerd would load) already holds the 20 earlier frames and equals the in-memory state. It fails if the hold is removed. - `trace_interpretations_name_only_saved_events`: every event id that a trace record names is in saved state at the moment the record is written. It fails if records are written before the save. - `a_crash_inside_an_unsaved_batch_leaves_saved_state_and_provider_output_unchanged`: after 122 frames are read and not yet saved, the saved file is byte-for-byte unchanged and runnerd has written nothing to the provider. A reload gets the pre-batch event sequence and no pending events. - `a_held_cancellation_that_cannot_reach_the_provider_keeps_the_completed_turn`: the provider closes stdin and then completes the turn with a tool call still pending. The held cancellation cannot be written, and the turn still completes and is saved. - `trace_interpretations_survive_a_provider_exit_in_the_same_poll`: the trace keeps the mappings for frames that arrived in the same poll as the provider exit. - `measure_streamed_frame_cost_before_a_tool_call` (ignored): prints saves and tool-call latency for different frame counts and kept-state sizes. ## Verification - `cargo test --locked -p paperclip-runner-core` (debug, macOS arm64): library 595 passed, 1 failed; all 35 integration test binaries passed (`--no-fail-fast`). The one library failure is `task_memory::tests::monitor_bounds_notices`. It also fails when run alone, takes about 9 minutes, and waits on file-watch timing in `task_memory.rs`, which this PR does not touch. In one earlier run, two ACPX park tests in `acpx_park_preparation` failed. The same binary also failed on unchanged `master` (with a different test), and it passed in the final run. - `cargo test -p paperclip-runner-core --lib measure_streamed_frame -- --ignored --nocapture`, debug build, macOS APFS (`sync_all` is `F_FULLFSYNC`). Each row is one turn: frames streamed, then one tool call. | Kept state | Frames | Saves (master) | Tool-call latency (master) | Saves (this PR) | Tool-call latency (this PR) | | --- | --- | --- | --- | --- | --- | | 4 KB | 100 | 102 | 946 ms | 1 | 18 ms | | 4 KB | 400 | 405 | 3,791 ms | 7 | 70 ms | | 211 KB | 100 | 102 | 3,207 ms | 1 | 37 ms | | 211 KB | 400 | 405 | 12,803 ms | 7 | 193 ms | | 833 KB | 100 | 102 | 9,251 ms | 1 | 93 ms | | 833 KB | 400 | about 405 | more than 30 s (test deadline) | 7 | 567 ms | With 400 frames, the remaining saves are one per poll of up to 128 frames and one per controller acknowledgement. - With the debug `paperclip-runnerd` and `fake-codex-app-server` binaries from this branch: `npx vitest run` on `src/live/runnerd-opencode-streaming-tools`, `runnerd-opencode-assigned-tools`, `runnerd-codex-transport`, `runnerd-codex-transport-settlement`, `runnerd-codex-transport-cold-restore`, `runnerd-restart-continuation`, `runnerd-saved-continuation`, `runnerd-detach-durability`, and `src/cli/opencode-proxy-output`, `opencode-proxy-events`, `opencode-app-server-proxy`: 11 files, 353 tests passed. ## Risks - Durability. The rule is: nothing derived from a frame leaves runnerd before the state that holds that frame is on disk. That covers delivered events, command results, park decisions, tool results and rejections, courtesy rejections, Cursor Cloud terminal acknowledgements, and trace records that name event ids. The tests above check each of these. - The unsaved window is at most one poll (128 frames). Every frame in it is undelivered: no event from it reached the controller, and runnerd wrote nothing to the provider while it was unsaved. `a_crash_inside_an_unsaved_batch_leaves_saved_state_and_provider_output_unchanged` proves this. A crash in the window therefore leaves the saved state and everything the controller and provider have seen exactly as a crash just before those frames were read. The resumed run starts from the same event sequence, so it cannot deliver an event id twice. Its normal recovery (thread resume and `thread/read` reconciliation) handles those frames in the same way as frames still in the provider pipe. On `master`, a crash could already lose the one frame being processed. - One provider write can still happen in the window: `thread/read`, which `CodexProvider::poll` sends to check the lineage of an unknown helper thread. It is a read-only query that waits for its answer, and it changes nothing on the provider side. - Courtesy rejections now reach the provider at the end of the poll instead of during it. The delay is one batch. The provider gets the same replies. - Previous-release story: the saved file shape does not change, and no new field is saved. A file from the previous release loads as before. The skip check compares exact bytes, so an older file is never treated as already saved. The first save after an upgrade rewrites it in the current shape. A deploy that lands mid-turn sees a file that the previous release saved after each frame. That file is valid input for this code. - The ACPX backend has its own frame loop and is not changed here. ## Model Used - Anthropic Claude Opus 5.5 (`claude-opus-5-5`), used through Claude Code with tool use (shell, file editing) and extended thinking. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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DottaandClaude Opus 5.5
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088bdf7cfa |
fix(daytona): wait out a sandbox state change before starting it for workspace realize (#20212)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - On Daytona, every run realizes its workspace in the leased sandbox. Realizing it first makes sure the sandbox is started > - Right after a control-plane restart, the sandbox can still be mid-transition, for example stopping or starting from the previous lifecycle step > - The plugin called `sandbox.start` straight away. Daytona rejects that with "Sandbox state change in progress", so the run failed `setup_failed` and needed a Retry > - This pull request waits out a sandbox's state change before starting it, and retries a start the provider rejected for that reason, within the existing start deadline > - The benefit is that a run whose sandbox is briefly transitioning starts on its own ## Linked Issues or Issue Description Refs #20211 **What happened?** Daytona per-turn restart-chaos K13 storm w-20261109T074128-s9503 (revision |
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DottaandClaude Opus 5.5
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9c18cf61da |
fix(runner): keep discarded OpenCode token deltas from delaying tool calls (#20209)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Native OpenCode runs use a TypeScript app-server proxy between OpenCode and runnerd > - runnerd reads the proxy's frames in order, only after the controller acknowledges earlier events > - For each frame, runnerd rewrites its whole durable provider state with fsync, including every tool result that the turn retains > - The proxy sent one `item/delta` frame for each reasoning or tool-output token, and runnerd discards `item/delta` > - A Paperclip tool call request therefore waited behind hundreds of discarded frames, and the wait grew with each tool result in the turn > - This pull request stops the proxy from sending the token deltas that runnerd does not consume > - The benefit is that tool calls reach runnerd without that queue, so agent turns finish faster ## Linked Issues or Issue Description **What happened** In the chat eval `plugins.configure-plugin` (runner-opencode, deepseek-v4.1-flash, GitHub Actions run 42574640038), `paperclip_search_api` calls in one turn slowed from about 1.4 s to 9-15 s each. The server handled every call in 50-250 ms (`tool.execution` spans). For one `call_api` call, 6.3 s passed between the server's 403 and the next agent activity. Time to first token was about 4.4 s. The run events show the cause. Events that OpenCode streams reach runnerd in bursts. In one burst, the usage events for three different model requests arrived within 0.5 s, which no model can do. Each burst ends with the next tool call request. 143 of 203 recorded runner-opencode runs that we checked show such bursts, and 108 show a gap of 8 s or more. Many chat eval cases that time out use this runner. The mechanism: 1. OpenCode streams reasoning one token at a time. The proxy forwarded each token as its own `item/delta` frame. 2. runnerd reads proxy frames in order and only after the controller acknowledges earlier events. For each frame it calls `save_state`. That serializes the whole provider state, with the tool results retained in the turn, and fsyncs it. 3. runnerd's Codex facade has no mapping for `item/delta`, so it discards the frame after the save. 4. A tool call request is one more frame in the same ordered stream. It waits until runnerd works through every earlier delta frame. The wait is about (reasoning tokens) x (save cost), and the save cost grows with each retained tool result. **Expected behavior** A Paperclip tool call reaches runnerd soon after OpenCode makes it. Its delay does not grow with the reasoning length or with the number of earlier tool calls in the turn. **Steps to reproduce** 1. Run a native OpenCode chat turn with a reasoning model that makes many sequential Paperclip tool calls, for example `search_api`. 2. Compare each tool's `item.completed` tool_result time with the `tool.execution.completed` time and with the next `item.started` tool_use time in the run events. 3. See that the gap grows during the turn, and that events for several model requests arrive within less than one second. 4. For a local model of the mechanism: run the pinned OpenCode binary with a controlled OpenAI-compatible provider that streams 300 reasoning tokens before each tool call. Pass the driver events through the proxy's mapping and batching into a reader that consumes one frame at a time with a save cost that grows by 4 ms per completed tool result. Before this change, 8 sequential calls waited 1.7, 3.1, 4.2, 5.4, 6.7, 7.9, 9.2 and 10.5 s behind 142-261 queued frames. After this change, they waited 64-93 ms behind 0 frames. ## What Changed - `shouldForwardOpenCodeProxyItem` now takes the event type and payload. For `item.delta`, it forwards only assistant text (`agentMessage` or `text`), which runnerd maps to `item/agentMessage/delta`. - The proxy keeps reasoning and tool-output token deltas. Completed reasoning and tool items still go to runnerd as `item/completed`. Tool progress still goes as `item/updated`. - New regression test: a step with 1,000 streamed reasoning and tool-output tokens puts the same number of frames before the tool call request as a step with 1 token, and no `item/delta` frame is written. - New test: assistant text deltas are still forwarded. Completed reasoning items are still forwarded. ## Verification - `pnpm exec vitest run src/cli/opencode-proxy-events.test.ts src/cli/opencode-proxy-output.test.ts` in `packages/paperclip-runner`: 15 passed. - Red/green: with the predicate change reverted, the two new tests fail. With the change, they pass. - `tsc --noEmit -p tsconfig.test.json` in `packages/paperclip-runner` has no errors in the changed files. Local errors exist only in `src/eval/workflow-harness.ts`, which needs a built `@paperclipai/paperclip-eval-kernel`. - Local before/after measurement with the real pinned OpenCode binary (`opencode-ai@1.18.34`), described in Steps to reproduce, step 4. - Not run locally: the suites that need the `paperclip-runnerd` debug binary or the bundled provider entrypoints (`runnerd-opencode-streaming-tools`, `runnerd-codex-transport`, `opencode-proxy-thread-read`). They fail the same way on the unchanged base in this worktree because those build outputs are missing. CI covers them. ## Risks - Low risk. The changed frames were discarded by runnerd. No persisted state shape changes, so no previous-release story is needed. - If runnerd later maps a reasoning delta method, the proxy must forward it with batching, as it does for assistant text. The test names this boundary. - This change does not change the per-frame durable save in runnerd. Mapped frames (assistant text, tool items) still pay it. A runnerd change that skips the save when a notification changes no state would protect other proxies too. That is a separate change. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - Anthropic Claude Opus 5.5 (`claude-opus-5-5`), used through Claude Code with tool use (shell, file edits, local benchmarks). ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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DottaandClaude Opus 5.5
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42bc238aa5 |
fix(runner): keep a restart continuation when the lost turn's terminal is delivered again (#20196)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - When a restart loses a native run's active turn, the run records it as `provider_turn_lost_on_restore` and continues in a same-conversation continuation turn > - #20118 taught the event consumer to skip a stale restart-lost terminal of another turn once a continuation is running. It applied only when the checkpoint already recorded the interruption > - When the checkpoint instead names the lost turn as active (the drain hit right after the first turn was submitted), the consumer starts the continuation on the first lost terminal. If the same lost terminal is then delivered again, it was taken as the run's terminal and failed the run > - This pull request applies the skip to any recovered run once its continuation has started. For a checkpointed interruption it still waits for the startup decision first > - The benefit is that a turn lost on restore always continues, however often its lost terminal is delivered ## Linked Issues or Issue Description Refs #20118 **What happened?** Local restart-chaos K13 regression storm w-20261109T055902-s9402 (master |
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Nicky LeachandClaude Opus 5.5
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9046884811 |
perf(native-runtime): claim a parked Runner while the follow-up run prepares (#20195)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work
> - Paperclip Runner executes native agent runs. A host can park an idle
Runner (release it and freeze it) between runs, and resume it for the
next run on the same task.
> - A follow-up run that reuses a parked Runner must claim it first. The
claim is a bootstrap ticket, a checkpoint flush, and the plugin resume
that thaws the Runner.
> - Core made the claim only inside `attachRun`, after all of its
per-run preparation. The claim does not depend on that preparation, so
the two ran in series.
> - This pull request starts the claim while Core still prepares the
run. `attachRun` then waits for the claim that is already in progress.
> - The benefit is a shorter start for every follow-up run on a parked
Runner. The model below gives about 285 ms per run at P50.
## Linked Issues or Issue Description
No public issue exists. The issue is described inline.
**What happened?**
A follow-up run that reuses a parked Runner claims the Runner only in
`attachRun`. Core calls `attachRun` after backend setup: runner
environment, assigned MCP tools, tool authority and the plugin task
owner. The claim waits for all of this, but it uses none of it.
**Expected behavior**
The claim runs at the same time as backend setup. Everything that needs
the new run's tool authority stays at attach.
**Steps to reproduce**
1. Run a Codex or Claude task on a host that parks Runners between runs.
2. Let the run finish and the Runner park.
3. Send a follow-up. Before this change, the plugin resume starts only
after backend setup ends.
**Paperclip version or commit**
`master` at
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