Commit Graph
7 Commits
Author SHA1 Message Date
Nicky Leach dc46b575ac fix(plugins): deliver agent runtime events only to the owning plugin (#19170) 2026-11-04 20:57:19 -08:00
Nicky LeachandClaude Opus 5.5 2c39a2866b feat(plugins): let managed config grant worker variables to a plugin (#19049)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - A managed instance gets its plugins from the control plane, and
people do not install them
> - Some of these plugins need deployment values, such as a service
origin and a capability
> - The plugin worker environment is scrubbed, and only a fixed list of
first-party providers gets deployment variables
> - Core also sends lifecycle events and project instance secrets only
to plugins with a saved config row
> - So a provisioned plugin cannot work until a person saves
configuration for it
> - This pull request lets the managed config grant named variables to a
selected plugin
> - The benefit is that a distribution plugin can run with no tenant
configuration, and Core does not need to name it

## Linked Issues or Issue Description

No issue exists. This describes the problem. I searched open pull
requests for related work and found no duplicate.

**What existing behavior does this improve?**

How a plugin provisioned through `plugins.autoInstall` receives its
deployment settings.

**Current behavior**

`buildPluginWorkerEnv` forwards variables only from a fixed list that
names first-party packages. A distribution plugin cannot be on that list
without Core naming it. A plugin with no `pluginConfig` row gets no
resource lifecycle events, and project instance secrets refuse it.

**Proposed behavior**

The managed config can include `plugins.workerEnv`. It maps a catalog
key to variable names. The worker of that plugin receives those
variables from the server process environment. The managed config can
also include `plugins.enabledCompanies`. It maps a catalog key to
company IDs. In those companies, the plugin gets lifecycle events and
can use project instance secrets with no config row.

**Reason and benefit**

The control plane stays the only place that decides which plugin gets
which values. Tenants do not handle these values, and they are not in
the database or in the managed config document.

**Alternatives considered**

- Create a config or enablement row for each company. The control plane
would need a new tenant write API, and a row can stay after the document
removes access or return after a database restore. The document is never
saved, like the other managed settings.
- Give a grant access to every company. This has no per-company opt-in.
- Put the values in the managed config document. The document does not
hold secrets, and this rule stays true because it holds only names.

## What Changed

- `parseManagedConfigEnv` accepts an optional `plugins.workerEnv`
object. Each key must be in `plugins.autoInstall`. Names must be
uppercase variable names, with no duplicates.
- Startup fails if a name looks like a host credential, such as a name
with `KEY`, `TOKEN`, `SECRET`, `PASSWORD`, `DATABASE` or `JWT` as a
word, or if it controls how the worker loads code, such as
`NODE_OPTIONS`.
- `parseManagedConfigEnv` accepts an optional `plugins.enabledCompanies`
object. Each key must be in `plugins.autoInstall`. Values must be
lowercase company UUIDs, with no duplicates.
- `managedPluginWorkerEnvGrant` and `managedPluginEnabledCompanies`
return values by plugin key. A managed instance only starts a selected
plugin from the current image, so the saved package path is not part of
this check. It can be old or null.
- `buildPluginWorkerEnv` forwards granted variables. This does not
depend on the `environment.drivers.register` capability.
- Plugin lifecycle delivery includes a plugin with no config row only
for the companies the document names. It still skips a company that
disabled the plugin. The runtime event listener follows the same rule.
- Project instance secrets accept a plugin with no config row only for a
company the document names.
- A variable grant alone gives no company access.
- `doc/plugins/DISTRIBUTION-PLUGINS.md` describes both sections.

## Verification

- `npx vitest run` in `server/` on `managed-config`,
`managed-plugin-worker-env`, `plugin-lifecycle-delivery`,
`project-instance-secrets`, `plugin-database` and `bundled-plugins`: 201
tests pass.
- The new tests cover a digest-verified distribution plugin, a stale
saved package path, a catalog key named after an inherited property, a
company the document does not name, a company that disabled the plugin,
a named company that does not exist, a grant with no enabled company,
and host credential names.
- `tsc --noEmit` in `server/` shows no errors in the changed files. My
worktree does not have the built `@paperclipai/paperclip-runner`
package, so unrelated files show errors locally. CI runs the full
typecheck.
- I did not run the full test suite locally. CI runs it.
- I did not test this change on a running instance.

## Risks

- **Older builds:** a build without this change refuses a document with
`plugins.workerEnv` or `plugins.enabledCompanies`, because it fails
closed on unknown keys. A control plane must send these sections only to
a build that supports them.
- **Trust:** the granted plugin gets the variable values in its process.
The image owner and the control plane already trust this plugin. The
name check stops a mistake with host credentials, but a name check
cannot prove that a value is not sensitive. Core cannot use an
allowlist, because it must not name the variables of a private plugin.
- **Company scope:** the control plane sets which companies a plugin
serves. A new company needs a new document, and the server reads the
document when it starts. Self-hosted instances do not change.
- **Rotation:** a new value reaches the worker only when the server
restarts. Rotation without a restart is not part of this change.
- **Background calls:** a grant does not add proactive company access. A
plugin that makes background calls with no invocation still needs a
saved config for that company.
- This changes core plugin behavior, and I did not discuss it in `#dev`
first. Maintainers can tell me if they want a discussion before review.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), through Claude Code, with tool
use and code execution.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-04 15:24:43 -08:00
Nicky LeachandClaude Opus 5.5 be20d4ad97 fix(projects): keep projects on the storage chosen at creation (#19036)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - A project stores its work in Core/local storage or in a storage
plugin
> - Today, Core finds the installed default each time it reads a project
> - So installing a default storage plugin moves existing projects,
without a saved change
> - Agents that cannot reach the new storage then lose access to new
workspaces
> - This pull request makes Core apply the default once, when it creates
a project
> - The benefit is that a project stays on its storage until a person
moves it

## Linked Issues or Issue Description

No issue exists. This describes the problem. I searched open pull
requests for related work and found no duplicate.

**What existing behavior does this improve?**

How Core chooses the storage for a project when a plugin claims
`defaultForProjects`.

**Current behavior**

Installing such a plugin changes the storage of every existing project
with no explicit choice. Disabling the plugin changes it back. Nothing
is saved, so the project has no fixed owner. Execution environments and
storage are separate contracts, so an agent can lose access to new
workspaces on a project that it used before.

**Proposed behavior**

Core saves the storage choice on the project when it creates the
project. A project with no saved choice uses Core/local storage. A
plugin-backed project stays attached to its plugin. A Core/local project
can move to a plugin.

**Reason and benefit**

A project stays on its storage until a person moves it, so installing or
disabling a plugin does not change where work goes.

**Alternatives considered**

- Keep the default at read time and add a process that saves a choice on
existing projects when a plugin arrives. This adds a background step and
a race with new projects.
- Add a new database column. The existing policy field already holds the
choice, so a migration is not necessary.

## What Changed

- `resolveProjectWorkspaceProvider` reads only the saved choice. It no
longer applies an installed default.
- `withDefaultProjectStorage` applies the default when Core creates a
project, including a personal private project. With more than one
default, a project with no explicit choice is refused. This is the
existing conflict rule, now applied at creation.
- `projectService.update` refuses a change of storage on a plugin-backed
project. An update that omits the field keeps the attachment.
- Plugin lifecycle delivery sends project events to a storage provider
only for projects attached to it, and for deleted projects. Core
acknowledges the other events for that provider. Other plugins continue
to receive all project events.
- The project settings control has no "Inherit" option. It is locked on
a plugin-backed project.
- `ProjectWorkspaceProviderConfiguration.source` no longer has the
`"default"` value.
- A project with no repository or folder ignores its saved storage
choice when a task runs. A storage plugin cannot manage this type of
project, so its tasks use a plain task directory. Without this change,
the second run of a task reset the agent session, and remote agents
could not use an empty task directory.
- The plugin SDK README and the plugin authoring guide describe the new
rules.

## Verification

- `npx vitest run
server/src/__tests__/project-workspace-provider.integration.test.ts
server/src/__tests__/plugin-lifecycle-delivery.test.ts
server/src/__tests__/plugin-workspaces.integration.test.ts
packages/plugins/sdk/tests/workspace-provider.test.ts`: 93 tests pass.
- `npx vitest run src/components/ProjectProperties.concurrency.test.tsx`
in `ui/`: 9 tests pass.
- `pnpm --filter @paperclipai/server typecheck` and `pnpm --filter
@paperclipai/ui typecheck` pass.
- `npx vitest run` on `heartbeat-session-preparation`,
`workspace-preparation`, `remote-workspace-source`,
`project-workspace-provider.integration`, and
`plugin-workspaces.integration` in `server/`: 231 tests pass.
- I did not run the full test suite locally. CI runs it.
- I did not test this change on a running instance.

## Risks

- **Behavior change at upgrade:** an existing project that uses a plugin
only through the installed default, with no saved choice, moves to
Core/local storage after upgrade. Its plugin files stay in place, but
new work does not use them until an operator sets
`storageProviderPluginId` on the project. This pull request has no
automatic backfill.
- **Missed lifecycle events:** a provider does not receive events for a
Core/local project. If the project moves to that provider later, the
update event starts its reconcile.
- **One-way move:** a person cannot move a plugin-backed project back
through the API or the UI. This is intended. If a plugin is disabled,
the project fails closed, as it does today for an explicit choice.
- This pull request does not stop a person from assigning an agent to a
project with storage that the agent cannot reach. That is follow-up
work.
- This changes core plugin behavior, and I did not discuss it in `#dev`
first. Maintainers can tell me if they want a discussion before review.

## Model Used

- Claude Opus 5.5 (`claude-opus-5-5`), through Claude Code, with tool
use and code execution.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-04 13:07:29 -08:00
Nicky LeachandClaude Opus 5.5 11ac90e31f fix(build): typecheck server/src/__tests__ and fix every type error (#18739)
## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work
> - The server has about 1,100 test and helper files in
`server/src/__tests__`
> - `server/tsconfig.json` excludes that directory, Vitest does not
check types, and no script runs the tsconfig in that directory
> - So a test can call a function with the wrong arguments and still
pass, and no tool reports it
> - This gap hid 2,168 real type errors, and some of them hid tests that
did not test what they claim
> - This pull request fixes all of these errors and adds the directory
to the server layers from paperclipai/paperclip#18737
> - The benefit is that a type error in a server test now fails the
typecheck, with no baseline and no backlog

## Linked Issues or Issue Description

Refs paperclipai/paperclip#18737, which is merged and added the server
layers. Refs paperclipai/paperclip#18738, which is merged and checks the
test projects outside `pnpm -r`, so it is not a duplicate. Refs
paperclipai/paperclip#18137, which records that this directory has no
check.

**What happened?**

No tool checked the types of 1,074 of the 1,101 files in
`server/src/__tests__`. I searched `package.json`, the workflows, and
all tsconfig files. 27 files are in the program of another tsconfig, and
these 27 have 0 errors. 11 of the 27 are in
`helpers/maintenance/tsconfig.json`. No script ran that project when I
measured this. paperclipai/paperclip#18738 now runs it.

**Expected behavior**

The server typecheck checks these files, and a type error fails the
check.

**Steps to reproduce**

1. On the base commit, run `tsc -p server/src/__tests__/tsconfig.json
--noEmit`. It reports 6,536 errors and needs 12.3 GiB.
2. Add a type error to any file in `server/src/__tests__`.
3. Run `pnpm --filter @paperclipai/server typecheck`. It passes.

**Paperclip version or commit**

I measured the error breakdown below on commit `8dfd632452`, with
TypeScript 7.0.2. The branch now includes master up to
paperclipai/paperclip#18865.

**Deployment mode**

Not applicable. This issue applies to development and CI. No production
source file in the server changes.

### Error breakdown

Each row adds one change to the row above.

| Step | Total errors | Change | Cause |
| --- | --- | --- | --- |
| Config as committed | 6,536 | | |
| Add `src/types/*.d.ts` | 4,447 | -2,089 | Config. The Express request
types were missing. |
| Set `rootDir` to the repository root | 2,436 | -2,011 | Config. |
| Set `allowImportingTsExtensions` | 2,181 | -255 | Config. Vitest
accepts `.ts` imports. |
| Add `ES2024.Promise` to `lib` | 2,138 | -43 | Config. Node 24 has
`Promise.withResolvers`. |
| Set `allowJs` for `.mjs` imports | 2,148 | +10 | Config. It removes 8
`TS7016` errors and shows new real errors. |
| Set `declaration` to false | 2,142 | -6 | Config. Tests emit nothing.
|
| Count only files in `server/src` | 2,058 | -84 | Other packages: 53
Daytona, 29 Runner test, 2 UI. |

So 4,478 of the 6,536 errors (69%) came from config or scope, and 2,058
are real type errors in 314 files. The 29 Runner test errors are also
real, which gives 2,087 errors. Tests that master added after this
measurement had 81 more errors, so this pull request fixes 2,168 errors.

This table classifies the first 2,058 errors.

| Kind of real error | Errors |
| --- | --- |
| Wrong argument or assignment type | 1,023 |
| Stale or partial fixture objects | 525 |
| Property that the type does not have | 317 |
| Missing narrowing of null or unknown | 101 |
| Implicit any | 60 |
| Missing name or module | 16 |
| Other | 16 |

### What the type errors hid

Most errors were stale fixtures and loose mocks. These errors hid real
test problems, and this pull request fixes them:

- **A test that never ran.** `instrumentation.test.ts` required
`sdk-trace-base`, which is not installed. So 3 span tests were skipped.
They now run and pass.
- **Assertions that could not fail.**
- `issue-thread-interactions-service` used a company ID as an issue ID.
- `status-card-evaluation-work` compared `[]` with `[]` in a rollback
check.
- `slack-conversation-lifecycle` read `item.issueId`, which does not
exist.
  - `email-channels` used a permission key that does not exist.
- `heartbeat-project-env` imported `LOW_TRUST_REVIEW_PRESET`, which is
not exported. The value was undefined.
- **Postgres processes that did not stop.** 11 test files called `stop`
on the test database helper. That method does not exist, and the helper
method is `cleanup`.
- **Arguments that the service ignored.**
- `methodKey` is now `connectionMethodKey` in the Daytona, Unikraft,
1Password, and Railway tests.
- 108 calls passed `"owner-user"` to a parameter that expects an options
object.
- 9 chat wizard fixtures passed `managementContext` as `source`, so they
ran `existing_app` and not `manifest`.
  - 2 tests passed a `{ userId }` actor that the function ignores.
- Inserts into `environments` passed a `companyId` column that the table
does not have.
- **Problems in tests that master added during this work.**
- `sandbox-creation-operations` read `database.connectionString` when an
external test database was set. In that mode `database` is undefined, so
the fixture would stop with a TypeError. It now uses the external URL.
- `idle-completed-history` set a Dot operation to `dispatched`. That is
a Muse status, and the Dot type does not have it. The fixture now uses
`admitted`, which is a real in-flight Dot status.

### Possible product problems, not changed

These may be real problems in production code or types. I did not change
them, because this pull request does not change production behavior:

- `decisions-service` `service.create` does not validate the lenient
`cancel_issue_tree` input.
- `createConnection` ignores `input.connectionPurpose`.
- The `createConnection` route schema default stores `{}` for
`transportConfig`.
- `prepareManagedAiRuntime` accepted the invalid value `mode:
"connection"`.
- `createBinding` accepts invalid `projectionClass` strings outside
class 3.
- `ensureManagedProjectWorkspace` forwards an untyped `repoRef` by
spread.
- `routineVariableSchema.label` is optional, but `RoutineVariable.label`
is required.
- `ToolRunContext.projectId` may be too strict.
- `withdrawInteraction` reads `issue.status`, which its type omits.
- `issueService.list` and `reconcileNativeFinalizations` omit fields
that they return at runtime.
- `createGitHubExternalObjectProvider` handles `tokenProvider: null`,
but its type forbids this value.

## What Changed

- Fixed the 2,168 type errors. The diff changes 322 test and helper
files.
- Corrected `server/src/__tests__/tsconfig.json`. Editors and the
typecheck now read the same options and report the same errors.
- Added three `test-tree` layers to
`server/scripts/typecheck-layers.mjs`. They read the server layers as
declarations, and any error fails them. A hash of the path selects the
shard, so a new file does not move other files.
- Added `server/scripts/typecheck-stubs/daytona-sdk.d.ts`. Server tests
reach Daytona plugin source, and the root install does not have
`@daytonaio/sdk`.
- Changed two imports in `ui/src/lib/issue-execution-policy.ts` to use
`.js` extensions, because server tests import this file.
- Made `declarationsConfig` and `--declarations-only` skip the
`test-tree` layers, because these layers emit nothing. Other projects
read only the source layers. Added a test for this.
- Updated `doc/DEVELOPING.md`.

## Verification

Run these commands:

```sh
pnpm --filter @paperclipai/server typecheck
pnpm exec vitest run server/scripts/typecheck-layers.test.mjs
```

Results on macOS (arm64), Node 24, 16 cores. Each check ran after the
merge of paperclipai/paperclip#18738 unless the row says otherwise:

| Check | Commit | Result |
| --- | --- | --- |
| Server typecheck, `PAPERCLIP_TYPECHECK_LOW_MEMORY=1`, all 7 layers |
`6e45a08573` | Exit 0, 0 errors, 62 seconds, peak 3.52 GiB |
| `node scripts/typecheck-test-projects.mjs --low-memory` | `a3306bd13e`
| Exit 0, 0 errors, 42 seconds, peak 3.25 GiB |
| The same script with `--reuse-declarations` | `1b878aabc0` | Exit 0, 0
errors |
| `typecheck-layers.test.mjs` and `live-recovery-work.test.ts` |
`01db5634e4` | 90 passed. These include real compiler runs for a pass, a
type error, and an invalid tsconfig. |
| `tsconfig.declarations.json` after a full server typecheck |
`0fb1e4fb0a` | It references only `below`, `cycle`, and `above`. No
generated config names a `tsconfig.layers.json` file. |
| Owned runtime test in `idle-completed-history` | `e8f2f448ac` |
Passed, with the fix that master later replaced |
| `idle-incoming-wake`, `plugin-idle-manager`, and the changed
`chat-channels` test | `6e45a08573` | 30 passed |
| Runner `native-execution.test.ts` | `eab4dcc1f4` | 114 passed |
| The 19 server test files that changed since `eab4dcc1f4`, and
`typecheck-layers.test.mjs` | `259737b700` | 4,275 of 4,277 passed. The
2 failures are in `chat-channels` and are in the list of 7 below. |

The peak is the largest single process, from `/usr/bin/time -l`. Peaks
for the server typecheck were between 3.42 GiB and 3.56 GiB across 8
runs. Peaks for the test projects were 3.25 GiB and 3.37 GiB across 2
runs. I did not measure a cgroup.

**Runtime check of the fixes.** Types do not prove that a test still
works. So I ran all 309 changed server test files, 11,929 tests, before
the rebase onto paperclipai/paperclip#18737:

| Result | Tests | Detail |
| --- | --- | --- |
| Passed | 11,913 | Includes the 2 tests and the 54 `dot-runner` tests
that passed in a later run, as described below. |
| Failed | 7 | The same 7 tests also fail on the commit before the
fixes. |
| Skipped | 9 | These tests have their own skip conditions: `sentry` 5,
and 1 each in `bundled-plugin-registration`, `customer-success-cloud`,
`onepassword-connection`, and `workspace-runtime-https-live-exercise`. |

The 7 tests that fail with and without this change, on my machine:

- 3 tests in `chat-channels` and `email-channels` stop with `ENOENT` on
a `SKILL.md` file. The path is in the parent checkout, above the git
worktree that I used, so I expect that the worktree is the cause. I did
not prove this.
- `workspace-instance-cleanup` compares `/private/var/...` with
`/var/...`. This is a macOS symlink difference.
- 2 tests in `git-reproducible-managed-checkouts` get
`unknown_base_git_files` and expect `unpushed_managed_checkout`. I did
not find the cause.
- 1 more test in `chat-channels`, `materializes direct external-chat
finals once`, gets `undefined`. I did not find the cause.

CI is the check for these 7 tests. `ci / verify` passed on `eab4dcc1f4`.

Failures during this work:

- My fix to `agent-runtime-connector-access` changed an invalid
permission key in the setup, but not in the assertion. The runtime check
found this. I corrected the assertion, and the file passes.
- `heartbeat-plugin-environment` failed one wait in the full run. It
passed three times alone, so I think that load caused the failure. It
can fail again under load.
- `dot-runner` skipped all 54 tests in the full run because `cargo` was
not on my `PATH`. It then passed 54 of 54 with the toolchain on the
`PATH`.
- My first `lib` value removed the default DOM types, and the error
count went up by 375. I added the DOM libraries.
- My Daytona stub with bare `any` left 48 errors, because generic
helpers then inferred `unknown`. I added shapes that return promises.
- One fix to `agent-secrets-routes` used `class_3_static_lease`, and the
test failed. That class allows only specific paths. I reverted to
`unclassified`.
- `ci / General tests (server (8/12))` failed on `259737b700` because of
the flaky port in `idle-completed-history`. paperclipai/paperclip#18853
fixed this test on master, so this pull request keeps that fix.

**Audit of the diff.** I counted these patterns in added and removed
lines, to find fixes that only hide an error:

| Pattern | Added | Removed |
| --- | --- | --- |
| `@ts-ignore` | 0 | 0 |
| `@ts-expect-error` | 0 | 1 |
| `.skip` | 0 | 0 |
| `as any` | 9 | 9 |
| `: any` | 11 | 2 |
| `as never` | 8 | 2 |
| `as unknown as` | 35 | 4 |
| `Promise<unknown>` | 16 | 5 |
| `expect(` | 128 | 113 |

No hunk removes more `expect(` calls than it adds. Three removals of
test content were intentional, and I checked each one:

- `muse-control` removed `signalToken`. Line 1012 already asserts that
it is absent.
- `merged-pr-confirmation-sweep` removed legacy aliases. Other tests
cover them.
- `heartbeat-workspace-branch-containment` removed a `finalize` branch
that no test row can reach.

Some partial fixtures stay unchecked through `as unknown as` and
`Promise<unknown>`, mostly in `issue-agent-mutation-ownership-routes`
and `issue-comment-reopen-routes`.

**Accuracy of the check.** One program over the tree and the three
shards reported the same errors at the same positions. Memory, as the
peak of the largest process on one thread, was 3.93 GiB for one program
and 2.43 GiB for the largest shard. I measured these two values before
the fixes.

Not run or not proven:

- I did not run the full `pnpm test:run`, or a root `pnpm build`. I
expect CI to run the full suites.
- I did not run the 4 GiB container check, or the full
`scripts/typecheck-low-memory.mjs`. The peaks above come from macOS, so
they are not a Linux cgroup measurement.
- I did not run the UI typecheck after the merges.
- `workspace-runtime-https-live-exercise` is skipped, so its `cleanup`
fix did not run.

## Risks

- **A large diff in test files.** 328 files change. A pull request that
edits the same tests can get merge conflicts. New tests on master can
also add type errors before this merges. Any such error fails this check
and needs a fix here.
- **A higher cost for changes to source types.** A change to a type can
add errors in test files that the author did not touch. The author must
then fix them. This is the purpose of the check, but it is new work.
- **Changed test behavior.** Some tests now run paths that they did not
run before, such as the 9 chat wizard fixtures and the 3 span tests.
They pass here, but they can be more sensitive to timing or to the
environment.
- **The Daytona stub can go stale.** The stub is written by hand. If the
plugin uses a new SDK member, the typecheck reports an error until
someone updates the stub.
- **The release path.** `release-verify.yml` and `scripts/release.sh`
run `pnpm -r typecheck`, so they now run this check.
- **The tsconfig change.** The test transform reads
`server/src/__tests__/tsconfig.json`. The options that I changed are for
type checks, and the runs above passed.
- **A gap that remains.** Tsconfigs in `packages/paperclip-runner` and
in most sandbox provider plugins exclude `*.test.ts`. This check does
not read most of those test files, so they can still drift. That work is
separate from this pull request.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

Anthropic Claude Opus 5.5 (`claude-opus-5-5`) through Claude Code, with
reasoning, tool use, code execution, and subagents. The runtime does not
show the context window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [ ] I have run tests locally and they pass (7 tests fail locally, with
and without this change. See Verification.)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [ ] All Paperclip CI gates are green
- [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

🤖 Generated with [Claude Code](https://claude.com/claude-code)

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-03 15:27:38 -08:00
Nicky Leach 65f59e339a Extend native instance secrets to project lifecycle plugins (#17034) 2026-10-20 20:09:16 -07:00
Nicky LeachandPaperclip 9f4a956b90 Add durable agent runtime synchronization hooks (#16499)
## Thinking Path

> - Paperclip manages agents and their runtime configuration.
> - Plugins can maintain external agent computers.
> - Configuration and file saves currently miss durable plugin delivery.
> - A transient activity notification cannot recover after interruption.
> - This pull request adds an opt-in agent runtime resource stream.
> - The existing dispatcher delivers and acknowledges its committed
work.
> - Plugins can prepare computers when configuration changes.

## Linked Issues or Issue Description

Related: #15631 and #16203 establish agent lifecycle and native durable
delivery.

**Problem**

Plugins cannot reliably react to agent configuration and instruction
changes without polling or waiting for execution.

**Proposed solution**

Add an opt-in `agent_runtime` stream to the existing resource journal.
Record changes at the database mutation and managed file audit
boundaries. Wake the dispatcher with content-free commit notifications.
Provide scoped runtime inputs to the selected lifecycle plugin.

**Alternatives considered**

Route-only activity events miss service and background writers.
Scheduled scans delay changes and repeatedly query unchanged state.

**Roadmap alignment**

This extends the existing plugin and agent configuration work.

## What Changed

- Add durable update/delete events for agent runtime state, including an
existing-agent baseline.
- Capture configuration changes, instruction edits, deletion, restore,
and managed run writeback.
- Add commit notifications and a reconnect scan. Register one listener
for configured, enabled runtime subscribers. Release it when none
remain.
- Keep HTTP startup independent of queued plugin callbacks.
- Add `ctx.agents.getRuntime`. Require lifecycle capability, invocation
company, enabled plugin, and owning lifecycle selection.
- Keep legacy agent/project subscriptions isolated. Manual inbox reads
retain both legacy streams.
- Resolve recovered instruction paths without reading or hashing bundle
contents. Use the company reporting graph for runtime health.
- Repair missed file events on identical save/deletion retries after a
journal failure; preserve content tokens and conditional-write checks.
- Correlate file audits with runtime revisions to deduplicate recorded
retries without a new table. Bound the lookup with the existing
company/timestamp index.
- Document the contract, migration, access boundaries, and
session-connection requirement.

## Verification

- Rebased the full stack onto origin/master after #16507.
- Final replayed stack: `pnpm -r typecheck` and `pnpm build` passed.
- All 132 affected runtime, skill, connector, publication, instruction,
managed-agent, and delivery tests passed after the latest-master rebase.
Workspace typecheck and build passed.
- Journal failure injection verifies recovery on identical file writes,
deletions, and instruction retries from an acknowledged inbox.
- Deduplication follow-up: 80 runtime/instruction/delivery tests and
server typecheck passed. Repeated retries create no audit/events; old
hashes returning after an intervening commit still repair delivery.
Built-in/native instruction writer regressions passed all 56 tests.
- PR 1 follow-up tests cover valid/cyclic reporting chains, listener
registration failure, multiple subscribers, global/company disable,
re-enable, unload, and startup with blocked callbacks.
- Database coverage includes rollback, journal failure, no-op
suppression, file saves/deletion, ordering/replay, owner/company denial,
independent-client commits, and real listener loss/reconnect.
- SDK/shared suites passed 1,059 tests during implementation.
CLI/delivery regressions also passed.
- Migration safety, map checks, diff whitespace, and local secrets/PII
scan passed.
- Hosted CI and security checks are fully green at `b296405e2`. Standard
Greptile and Apex both returned 5/5 with no unresolved findings.
- The broad local suite encountered an unchanged diagnostic test that
rejects the word "private" from an error stack. This worktree lives
under /private/tmp. The same unchanged diagnostic suite passed all 108
tests in the original checkout. Hosted full-suite checks provide
exact-head verification.

## Risks

- Apply migration 0347 before enabling a runtime subscriber. Runtime
notifications require session-level PostgreSQL LISTEN. Transaction-mode
poolers are unsupported for this opt-in feature.
- Database triggers share the mutation transaction. Journal failure
prevents configuration commits. Trigger work adds a journal insert to
relevant changes.
- Filesystem publication and SQL commit are separate boundaries. Direct
filesystem edits do not emit hooks. External clients must fence stale
revisions and retain conditional-write checks.
- The reader returns only that plugin's own instance secrets. Keep them
out of UI data, logs, plugin state, and agent files.
- No private transport integration or live remote computer qualification
is included.

## Model Used

OpenAI Codex, GPT-6, with reasoning, repository inspection, code
execution, and testing. The exact deployment model ID and context window
are not exposed in this session.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` /
`Closes: #` / `Refs: #` OR (b) described the issue in-PR following the
relevant issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub references)
- [x] My branch name describes the change and contains no internal
Paperclip ticket id
- [x] I have run tests locally and they pass (focused suites; broad
local limitation documented above)
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-16 07:53:04 -07:00
Nicky LeachandPaperclip db65a0863e Deliver durable resource lifecycle events to plugins without polling (#16203)
## Thinking Path

> - Paperclip manages AI agents and their work.
> - Plugins keep external resources aligned with Paperclip projects and
agents.
> - The durable resource journal stores changes, but its plugin
interface requires polling.
> - Project deletion has no journal entry, so consumers must scan for
missing projects.
> - This PR delivers committed journal events through a native plugin
callback and records deletion.
> - Plugins can recover unfinished work without periodic change scans.

## Linked Issues or Issue Description

Related: #15343 introduced the durable inbox. #15631 added required
agent lifecycle participation. This change keeps both contracts and adds
automatic delivery for the resource inbox.

**What happened?**

Plugins must schedule reads of the durable inbox. A deleted project has
no durable deletion event. Consumers must scan saved bindings to detect
its removal.

**Expected behavior**

Core should deliver committed resource events and replay unfinished
work. Empty queues should have no polling timer. Project removal should
leave a durable event.

**Steps to reproduce**

1. Install a plugin that consumes project lifecycle events.
2. Create or update a project. The plugin must call `listLifecycle` to
discover it.
3. Delete the project. The journal has no deletion entry.

## What Changed

- Add `resourceLifecycle` to the manifest and `onResourceLifecycle` to
the SDK. Require `events.subscribe` and a configured, enabled company
scope.
- Reuse transaction-aware work signals and the delivery coordinator.
Wake after commit, on startup and plugin activation, and after
configuration changes.
- Acknowledge only a matching successful result. Retry unfinished or
interrupted work. Retain deferred events without an idle retry timer.
- Wake again after successful worker configuration application, and
retain failed scans through idle drain (both Apex findings fixed).
- Keep ordering per resource and deliver past failed or deferred
resources. Keep the manual inbox methods for existing consumers.
- Record project deletion in the removal transaction. Extend the journal
constraint with a generated migration.

## Verification

- Apex follow-up: 129 focused worker, delivery, coordinator, and
application tests passed; server typecheck passed. Regression coverage
verifies configuration-application races and failed scans across idle
drain.

- Focused lifecycle, transaction coordinator, manifest, and SDK dispatch
suites: 105 tests passed, including single-connection saves, redacted
failure diagnostics, wakeups retained during idle drain, and per-event
retry deadlines.
- Complete SDK suite plus delivery database tests: 128 tests passed.
- Shared, database, and SDK typechecks passed. Direct server `tsc
--noEmit` passed against rebuilt SDK declarations.
- Full local `pnpm test:run` finished with 19,491 passed, 148 skipped,
and 6 failed tests across 5 files (plus two suite setup errors). This
run overlapped branch updates and is not final-head evidence: failures
included missing Cargo, local Git default-branch assumptions, and stale
in-process lifecycle modules. Final Apex-fix commit `75d028788` passed
all CI gates, including the full test shards, and received Apex 5/5 with
no unresolved comments.
- `pnpm -r typecheck` and `pnpm build` were attempted. Both stopped
because Cargo is unavailable locally. CI supplies the Rust toolchain.
- Local installation used the repository's documented lockfile fallback
because master has dependencies missing from its lockfile. No dependency
changes are included here.

## Risks

- Delivery is at least once. Plugins must re-read current state and make
external effects idempotent.
- Signals are process-local, like the other delivery queues. Startup
recovers committed rows. Independent database writers or multiple active
server processes require an explicit ownership and wake protocol.
- Apply migration `0340_open_warlock.sql` before running code that
records project deletion. Earlier deletions cannot be reconstructed.
- Automatic delivery selects plugins with company configuration rows.
`deferred` waits for a later startup, configuration change, or other
work notification.
- This does not replace required agent lifecycle participation or
establish that external mounts are unused.

## Model Used

OpenAI Codex (GPT-6), with tool-assisted code editing, code inspection,
and test execution.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [ ] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-10-13 12:00:30 -07:00