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Author	SHA1	Message	Date
yzxcj797andAndrew Aymeloglu	81dcc4f6bf	docs(kubernetes): fix agent-sandbox install manifest URL (#11410 ) ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The Kubernetes sandbox provider supports the Sandbox CR backend. > - Its migration guide tells users to install the agent-sandbox controller. > - The command names install.yaml, which is not a release asset. > - This pull request changes the asset name to sandbox.yaml. > - Users can then download the base controller and CRD manifest. ## Linked Issues or Issue Description Issue type Incorrect information. Where is the issue? packages/plugins/sandbox-providers/kubernetes/README.md, under “Migrating from job to sandbox-cr”. What's wrong? The installation command uses releases/latest/download/install.yaml. The upstream agent-sandbox release does not publish that asset. Suggested fix Use releases/latest/download/sandbox.yaml, the base installation manifest. ## What Changed - Replace install.yaml with sandbox.yaml in the controller installation command. ## Verification - Checked upstream release v1.0.8. Its assets are sandbox.yaml, extensions.yaml, and sandbox-with-extensions.yaml. - Reviewed the one-line documentation diff. - No Kubernetes installation or local tests were run. ## Risks - Low risk. This changes one documentation URL. - The URL follows the latest upstream release, so future upstream asset changes can affect it. ## Model Used Original author model use was not reported. Adoption and description update assisted by OpenAI GPT-6 (Codex), with repository and GitHub tool access. A more specific runtime model ID is not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [ ] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [ ] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [ ] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [ ] I have run tests locally and they pass - [ ] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Andrew Aymeloglu <aaymeloglu@gmail.com>	2026-10-29 11:12:05 -05:00
DottaandPaperclip	c32e1ba6da	fix(onboarding): keep approved child task handoffs runnable (#18160 ) ## Thinking Path > - Paperclip manages work through tasks, agent runs, dependencies, and human decisions. > - The first-task workflow asks for approval before it creates an execution task. > - File-producing work must run on a child task before onboarding can finish. > - A child blocked by its onboarding source cannot start while the source waits for that child. > - This change rejects that dependency during task creation and later edits, and gives the agent a correction. > - The shipped recipe shows the dependency direction and requires the actual approved inputs in the child instructions. ## Linked Issues or Issue Description What happened? After human approval, an onboarding run could create a child with the onboarding source in `blockedByTaskIds`. Creation saved a blocked child with no wake. The parent could then wait for that child. A handoff could also refer to input from the parent conversation without including the input in the child description. Expected behavior The approved child can execute before its waiting parent. Invalid first-task dependency input fails before task creation and leaves the same command key available for a corrected call. The child instructions include the required approved input and constraints. Steps to reproduce 1. Accept a proposal on a server-created first task. 2. Call native `create_task` with `status: "todo"` and the onboarding source in `blockedByTaskIds`. 3. Observe a blocked child with no scheduled wake. Block the parent on that child to expose the stalled handoff. Paperclip version or commit The regression reproduces on `f8484a9f8d1f68e9534fee4f29e00e716dc680f4`. The repair is based on current master. Deployment mode Core native and REST task creation. The same server boundary serves self-hosted and hosted instances. Related: #18080 fixed remote delivery of the selected first-task skill. This change handles the later child handoff boundary. ## What Changed - Reject a task blocked by its authenticated first-task source during creation and later dependency edits. Later agent edits also check the locked target's server-owned onboarding parent, protecting a child running under its own execution. Compare UUID identity in PostgreSQL so alternate supported UUID spellings cannot bypass the check. The error explains the correction. - Add a native child/dependency recipe with self-contained approved input guidance. Clarify the general `create_task` input descriptions and update their generated contracts. - Cover native and REST rejection, corrected retry, preserved valid dependencies and replay, and an executable recipe with exact input bytes read from the child's own context. Thread the authenticated run through native dependency edits. Keep blocker corrections independent of a new proposal decision. - Update execution semantics and the existing onboarding map entries. ## Verification - Red on `f8484a9f`: the new native regression received a created blocked child instead of the expected rejection. - Review regressions were red on the original PR head: uppercase, unhyphenated and braced source UUIDs created blocked children; a later child PATCH returned 200 and saved the reversed blocker. - Review follow-up reproduced both native and REST child-own-run bypasses on `75fa75a6`: the native dependency call applied the reverse edge; the child's own PATCH returned 200. The regression uses the actual authenticated child execution and an already checked-out task. - All 95 tests across first-task admission, assets, and the full native tool-authority suite pass. The shipped recipe is validated against the native schemas and exercised through real task/dependency services with disposable PostgreSQL. Rejected PATCH tests preserve existing authorization and attempt-audit behavior and require no requested task-field, relation or wake change. Compatibility controls retain ordinary manual parent blockers, explicit board edits, other blockers and empty-list corrections. - Runner TypeScript build, generated contracts, capability inventory, protocol manifest, and map checks passed. - Server typecheck and all 95 focused tests pass with the child-run follow-up. All latest checks pass on `f24509ae`: 55 successful checks, one neutral review check, four skipped checks, and a successful legacy security status. Both automated reviews are 5/5 on this exact commit. - Prior-head CI failures are preserved: the Runner close fixture had unconfirmed provider drain while suspension succeeded; its exact fake-provider subprocess row passed locally with unchanged sources. The browser outage test lost its title textarea before any outage write. A bounded local control with a fully loaded composer passed every original outage assertion. The prior failure is an editor-readiness race; its exact asynchronous ordering remains unproved. No UI, browser-test, or timeout change is included. Neither failure is counted as a pass or silently discarded. - The first `f24509ae` CI attempt had two interrupted jobs: Typecheck and General server 9/12. Their logs record runner shutdown signals. The server job also records lost runner communication. The same-head failed-job rerun passed both jobs and the required aggregate. It reused the other successful results. No source, test, or timeout change was made for the rerun. The failed attempt remains preserved. Full repository checks pass in CI; the local full repository typecheck, test, and build commands were not repeated. - No external model or provider calls are used by these checks. Real-provider acceptance at this revision remains separate. ## Risks - The new rejection uses the authenticated run and the server-owned onboarding origin. Ordinary tasks, other blockers, empty-list corrections, and already committed creation replay retain their existing behavior. Blocker edits do not reapply the creation approval gate. - Nonempty blocker edits perform two indexed identity reads; the task lookup covers at most the run source and locked structural parent. Other patches and empty-list corrections add no source lookup. The update guard adds no parent row lock behind a child. Existing REST authorization checkout and attempt auditing remain in place before the domain mutation guard. - The explicit input recipe guides the model. Schema and persistence tests do not prove that a future model follows every instruction. - The tool guidance changes the generated semantic catalog identity. The maintained generated files are synchronized in this change. ## Model Used OpenAI `gpt-6.1-sol` through Codex, with `ultra` reasoning effort, repository tools, code generation, and test execution. The context window is not exposed by the runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used and stated the available runtime detail - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have described the issue in-PR following the bug issue template - [x] I have not referenced internal or instance-local Paperclip issues or links - [x] My branch name describes the change and contains no internal ticket ID - [x] I have run focused tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-29 10:57:31 -05:00
DottaandPaperclip	76a796e964	test(runner): cover ACPX execution across controller replacement (#18161 ) ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Native Runner keeps provider execution separate from the main server. > - A server replacement must reconnect to the original execution. > - ACPX recovery also needs the original provider session to remain alive. > - We need to distinguish a controller outage from a provider crash or an explicit close. > - This pull request adds five process-level regression tests for those boundaries. > - The tests prevent duplicate launches and preserve the scope of the evidence. ## Linked Issues or Issue Description Refs #17097, #17439 and #17455. These changes add coverage for the existing recovery contract. They do not add another recovery implementation. What existing behavior does this improve? Native ACPX execution across authenticated PRP controller replacement. Current behavior Runner has recovery coverage, but this ACPX sequence needed a focused test: lose the controller, restore its checkpoint, adopt the same process, and close the old controller. A provider that has already closed can return `ACPX request snapshot requires the surviving provider`. That message alone does not identify why it closed. Proposed behavior Run five credential-free regressions with the production Rust Runner and a scripted ACPX peer. Preserve active work and offline completion. Check native transport adoption and old-controller cleanup. Keep provider-crash and explicit-close controls separate from controller recovery. Reason and benefit Catch a future change that kills or replaces a live execution during controller replacement. Keep a matching error control from being mistaken for proof of a hosted root cause. ## What Changed - Add five process-level ACPX controller recovery tests. - Restore controller state from an external checkpoint after deleting local controller storage. - Check that native transport adoption does not launch a replacement Runner. - Build the debug Runner before the tests. Pass only the test bootstrap credential to its process. - Verify scripted-peer shutdown through its lifetime sockets instead of signaling a saved provider PID. - Document the command, dependencies, optional prebuilt binary/profile overrides and verification limits in the Runner README. - Give the setup hook 30 seconds of margin above the bounded Cargo build. ## Verification - Focused test: `pnpm --filter @paperclipai/paperclip-runner exec vitest run src/control-plane/acpx-controller-recovery.test.ts --maxWorkers=1` — 5 passed. - Adjacent regression selection: `src/control-plane/`, `src/live/runnerd-controller-outage.test.ts`, and `src/live/acpx-request-recovery.test.ts` — 5 files and 195 tests passed. - Protocol manifest and package ownership checks passed. The standalone forbidden-import checker reports existing imports in unchanged files; this PR changes none of those files or the checker. - `pnpm -r typecheck` and `pnpm build` passed. The full `pnpm test:run` attempt is retained. Its first database cases failed because the local macOS PostgreSQL package lacked required dylib aliases. Direct native probes identified the missing libraries. Local dependency aliases restored initialization, and one unchanged failing warm-session database case then passed. The original full-suite attempt was stopped after that diagnosis. Its failures remain retained; full-suite completion is not claimed. - Current-head CI repair: browser shard 5 failed after the task reload because the result was still behind the conversation loading veil. The saved snapshots show this state. The UI has a 15-second history reveal limit, but the result assertion had a 5-second wait. The test now returns to the task tab and waits for its existing history-content readiness before it checks the result. `PAPERCLIP_E2E_PORT=38741 pnpm exec playwright test --config tests/e2e/playwright.config.ts tests/e2e/connection-reviews.spec.ts --grep 'connection review: (approve\|decline\|always\|failure),'` passed all four journeys in 2.9 minutes against a fresh local server and database. Master independently received the same readiness fix in #17923. This branch merged that exact base version, so the browser file is not part of the final PR diff. The five ACPX tests passed again after that merge. No production UI code changed in this PR. The original failed CI report is retained. - Retained CI failure: the first Linux run rejected the scripted peer's automatically assigned ports because they can be below the protocol minimum of 49152. The fixture now binds explicit random ports in the permitted range, with bounded collision retries. No production validation was relaxed. The fixed peer also passed a network-isolated Linux arm64 container check; that check used the actual generated peer and verified permitted ports and clean EOF shutdown. - Review follow-up: both native-transport reads require the original active turn ID with status `inProgress`. Adoption always runs for a selected prebuilt binary. The crash control accepts only explicit provider-loss diagnostics, not any snapshot-error wrapper. Focused tests cover these changes. - Final review follow-up: the setup hook has a 150-second limit around the 120-second Cargo build. The README documents both optional overrides. All five focused tests passed in default mode (17.72 seconds) and with the prebuilt binary plus profile overrides (10.90 seconds). The fixture version is explicitly passed through `--runner-version`; it is not a check against Cargo package metadata. The crash control verifies the original PID receipt and released lifetime fence ports before it accepts only known provider-loss diagnostics. - CI completed successfully for `d31647fb95f38b7d9d56bc8c13a9a8c0b391d247`, including all eight browser shards. Final head `949a70596f07042cf7b39a5a3ccb9a9445b6e855` also passed [all CI gates](https://github.com/paperclipai/paperclip/actions/runs/40904592159), including all eight browser shards, and received fresh 5/5 Greptile and Paperclip reviews. All six review threads are resolved. - Separate manual provider evidence used real Claude Opus 5.5, ACPX 0.13.1, Claude ACP 0.73.0 and Claude SDK 0.3.286 on macOS arm64. Source `929e840595c8933ca485ac7a2e99413e1e11ca64` survived 10-second and 300-second controller outages. Original source `4f8104dec6a0bb37009080daa8984a80f58b7a04` survived a 10-second outage. The five-minute case retained the original processes and session, made useful progress, reattached at 303.793 seconds from disconnect, and completed once. These runs preceded this branch rebase and do not qualify every change in the rebased server. - Retained manual failures: the first historical attempt failed installation admission because scratch dependency symlinks escaped their root. Correcting that setup allowed the next attempt to start. The five-minute harness initially checked the final message before asynchronous projection finished. Saved final-item and terminal events passed an independent evidence check. The original failed result remains retained. ## Risks - This PR adds tests and documentation only. It changes no production protocol, recovery logic, database schema or browser behavior. - The automated tests use a scripted ACPX peer. They do not establish real Claude, PostgreSQL, Daytona or Cloud rollout acceptance. - The tests require Cargo and a POSIX host. Their waits are bounded. They stop only their own Runner and scripted peer. - The earlier hosted provider loss remains unexplained. The separate real-provider experiments did not reproduce it. ## Model Used OpenAI Codex, GPT-6 family, with reasoning, tool use and code execution. The host does not expose a more specific serving model ID or context-window size. Anthropic Claude Opus 5.5 (`claude-opus-5-5`) performed the separate synthetic verification workloads. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-29 10:56:24 -05:00
Nicky LeachandPaperclip	27be859044	Record runtime activity under Runner authority (#18050 ) ## Thinking Path > - Paperclip manages agents and tasks. > - Runner owns each authenticated run and its provider process. > - Runtime clients need to report successful activity in that run. > - A retained process can outlive a run, so an operation needs current authority. > - This PR captures that authority before the operation and records activity afterward. > - Core can consume the event through the existing run stream. ## Linked Issues or Issue Description Builds on merged #18129 and targets master. The dependent consumer is #18131. Test stability fixes were separated into merged #18128. Earlier combined-head verification remains in [the archive](https://github.com/paperclipai/paperclip/pull/18050#issuecomment-6489369676). Subsystem affected Runner activity recording and provider command environments. Problem or motivation A retained provider process can complete an operation after its original run ends. Runtime clients need a host-attributed event and a helper that works inside the provider sandbox. Proposed solution Capture opaque Runner context before use. Publish a structured notification after success. Runner checks current authority and records `runtime.activity.recorded`. ## What Changed - Add `notification-context` and `record-activity CONTEXT NAMESPACE ACTIVITY_KEY`. Rotate context on warm attachment and process recovery. Accept no caller run ID. - Use one private named pipe. Reuse Runner's bounded JSON-line reader. Serialize concurrent publishers with a read-only lock. A blocking reader queues at most 128 records; the existing control loop handles at most 16 per pass. - Grant Codex access to the exact helper, descriptor, lock and pipe. Preserve other filesystem and network limits. Preserve host discovery values through provider launch boundaries and reject configured-environment overrides. - Update source identities to Pi 34, Copilot 81 and Grok 12. Keep historical identity fixtures and recovery behavior. ## Verification - Targeted release notification and sandbox-policy tests: seven passed. They cover run rotation, recovery, Unicode limits, concurrent writers, malformed and partial records, bounded queues, failed persistence and fixed-path cleanup. - Real CLI integration and pinned Codex 0.160.0 sandbox checks: passed. The sandbox check uses no model, credential or network call. It verifies activity recording while unrelated state reads and parent-directory writes remain denied. - ACPX profile generator check, formatting and diff checks: passed. - Rebased onto master `31b927e30` at head `64d0248a8`. Master used the same profile versions, so the resolution preserves its Pi 33, Copilot 79 and Grok 11 fixtures byte-for-byte and creates new identities. All identity checks pass. Five targeted provider/environment/recovery files pass 168 tests with one existing skip; the Rust Pi admission regression passes. The notification module and Codex sandbox implementation are byte-identical to the tested pipe head `671373fe0`. - Removed the mailbox traversal reported by security review. Its regression replaces the pipe path with a 100-level tree and an unreadable leaf. Shutdown preserves the leaf, performs no traversal and completes promptly, including with a partial record. - An initial targeted test failed because its run-rotation fixture updated config without updating durable state. The corrected fixture passes. Runner also rejects inconsistent run bindings. - Previous head `26abbf62b` passed Runner, build and browser CI. Server shard 11/12 failed in unchanged `attention-service.test.ts`: cleanup/test timeouts were followed by a duplicate `ATQ` fixture key. The final head needs fresh CI and review. - CI on `64d0248a8` completed with 52 successful checks and four intentional skips. Runner Vitest shard 1/2 failed when retained-state copies encountered the live FIFO; the aggregate also failed. Standard review scored 4/5 and found relative pipe paths plus late context publication. Follow-up `5c3f14d32` places IPC in a private canonical temporary directory and publishes context before welcome commands. Its relative-state CLI test, two authenticated reconnect cases, seven notification/policy cases and real Codex sandbox pass. One affected retained-settlement case passes with the matching release binary; the other 18 cases remain for CI. The sandbox denies sibling-directory and lock writes. All build, test and security checks pass on `5c3f14d32`; standard review is 5/5 with no unresolved threads. The requested Apex review is 5/5 on this exact head, with no findings or unresolved threads. - Earlier broad test results in the archive apply to their recorded source revisions. Per the requested workflow, final local checks stay targeted; GitHub CI supplies broad coverage. - After Apex completed, master advanced again and conflicted on Copilot identity. Head `e94a9359d` is rebased on master `8ac5a128e`; it preserves the published Copilot 80 fixture and uses Copilot 81. The notification module, Codex sandbox and durable control-loop code are byte-identical to Apex-reviewed `5c3f14d32`. All 131 targeted installation/compatibility/recovery cases and identity generator checks pass. All 55 checks pass with four intentional skips on the rebased head. Standard review is 5/5 with no unresolved threads. Apex is 5/5 on `e94a9359d`, with zero findings and no unresolved threads. GitHub confirms this head is conflict-free and ready for review. ## Risks Activity remains an optional hint and grants no access. A successful helper exit means publication to the pipe; Runner persists accepted events through its existing durable outbox. Full queues, unavailable helpers or failed writes can drop a hint without failing the operation. Context reads are local and do not wait for the control loop. Publishers have a 500 ms lock deadline and a 2 KiB record limit. IPC lives outside durable state. Idle transport blocks; cleanup removes its fixed files and empty private directory. The host must provide `/usr/bin/mkfifo`. Rebuild matching Runner/provider artifacts for the updated source identities. No dependency, migration, live provider call or deployment is included. ## Model Used OpenAI Codex, based on GPT-6, with reasoning, repository tools and code execution. The exact serving snapshot is not exposed. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-29 07:40:50 -07:00
DottaandPaperclip	27fbdb2a74	perf(workspaces): reuse verified seeds across task branches (#18159 ) ## Thinking Path > - Paperclip manages AI agents and their workspaces. > - Remote runs stage a recoverable copy of the selected host workspace. > - New tasks use separate workspace IDs and Git branches. > - The verified seed cache currently treats those identities as different content. > - This causes repeated clones and seed verification when task files and Git commits are identical. > - This pull request shares immutable seed content within a company and applies each task's branch to a private archive. > - It also removes credential broker calls for two local Git snapshot commands. ## Linked Issues or Issue Description What happened? New remote tasks rebuild the same Git seed under different workspace IDs and branches. In a measured staging run, preparation took 29.7 seconds. Git clone took 6.1 seconds and optional seed publication took 7.8 seconds. Publication overlapped the 4.4-second transfer, so those values cannot be added. Local `diff-files` and `write-tree` commands also request GitHub credentials. What did you expect? Reuse a verified seed when filesystem contents, Git HEAD, origin, and nested repository layout match. Preserve each task's branch, recovery archive, ignored files, and copyback behavior. Keep local snapshot plumbing independent of GitHub credential capture. Steps to reproduce 1. Configure a remote native environment and a Git project workspace. 2. Create two tasks from the same source commit with different task branches and workspace IDs. 3. Inspect the workspace preparation spans. Both tasks currently clone and publish the same seed content. Paperclip version and deployment mode Reproduced on Core `25f1070fbdabd96b26cdf199e624a77905f3ca37`, with a managed remote sandbox and native Runner. The local comparison used a public repository at a fixed commit with roughly 13,000 entries. Refs #17886, #16398, #16399, #17357. The Git launcher extension builds on Jamie Buchanan's work in #17886. The other PRs establish the seed verification, recovery, and eviction contracts preserved here. A search found no open PR for sharing these verified seeds across task branches. ## What Changed - Use a company-scoped cache bucket for native host-current preparation. Keep the existing bucket and company storage limits and eviction rules. - Remove branch names from the shared generation identity. Keep file contents, Git HEAD, origin, and nested layout in that identity. Keep the default workspace-scoped identity unchanged for other callers. - Store a detached Git archive in the shared cache. Copy it and append the selected branch metadata before upload and private per-run persistence. Existing durable-seed replay can read the private archive without the new cache option. - Forward the scope through the execution target and both command-runtime paths. - Treat `diff-files` and `write-tree` as local Git commands. Network commands, unknown commands, and managed commit identity keep their existing credential path. - Test new workspace IDs, named and detached branches, nested repositories, dirty and ignored files, symlinks, recovery, corrupt caches, refused publication, and copyback. ## Verification - Current head `6087bac274d50804d1b332646e43f3b8d41d798f`: 53 checks passed, two optional checks skipped, Greptile 5/5, no unresolved review threads. Linux CI passed. - Adapter-utils TypeScript 7.0.2 typecheck passed. - Server package typecheck passed, including its Runner and plugin build prerequisites. - 140 seed-cache, seed-reuse, and sandbox-runtime tests passed after rebasing. - 44 Git launcher and command-runtime tests passed after rebasing. - 30 native workspace preparation, warm history, and retention-configuration tests passed. All 56 retention tests also passed (5.72 seconds) after repairing missing library aliases inside the installed macOS Postgres package. That local dependency repair changed no repository source. The earlier startup timeouts occurred before test assertions. - The new seed reuse regression failed before the change because the second branch cloned again. It passes through the execution target and both command-runtime paths after the change. - Clean local preparation comparison: two alternating measured pairs, with an existing verified company seed and new task branches. Baseline: 19.63 and 9.85 seconds. Shared cache: 5.18 and 4.80 seconds. Median: 14.74 to 4.99 seconds. Each baseline cloned and published; each shared-cache run skipped both. Branch and file checks passed. The complete comparison loop took 58 seconds. - The comparison used real Git, archives, snapshot workers, and local file transport. It used no model calls. It does not establish a complete staging response time. The first generation still pays the cold preparation cost. ## Risks - A shared cache hit requires an identical generation that is still present. The company bucket retains the existing 16-generation/1 GiB bucket limit; busy companies may miss more often. - The branch binding appends entries to a private tar archive. Tests cover the host platform; Linux CI must also pass before merge. - A cache miss, corruption, or capacity refusal must retain the private recovery path. Existing tests exercise those cases. - Git plumbing can still encounter repository-specific filters or missing objects. This extends the existing local-command policy by two commands; it does not grant network credentials to them. - The latest measured real staging reply took 77.8 seconds. This change targets a bounded part of that path and does not claim the under-15-second response goal is met. ## Model Used OpenAI Codex, GPT-6 family, with reasoning and repository tools. The session does not expose the exact model revision or context window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-29 09:19:23 -05:00
DottaandPaperclip	2a6d4d1694	perf(db): index canonical task activity lookups (#18043 ) <!-- entire-trail-link-start --> https://entire.com/gh/paperclipai/-/trails/177/changes/paperclip/177 <!-- entire-trail-link-end --> ## Thinking Path > - Paperclip helps people manage AI agents and their tasks. > - Task lists rank tasks by their latest canonical activity. > - The existing lookup reads every event for each task before pagination. > - Query-only alternatives failed a narrow visibility control or the performance goal. > - This PR adds an index that lets the unchanged lookup stop at the newest qualifying event. > - The result is less history work with the same permissions, ordering, and response. ## Linked Issues or Issue Description Refs: #13803. That broader proposal stores a new activity field with triggers and a backfill. This index was authored independently and uses the existing query. Subsystem affected Task-list activity ranking and the database schema. Current behavior The list computes `MAX(activity_log.created_at)` for every eligible task. The existing entity index reads 50 events per task across 1,199 candidates in the representative fixture. Proposed behavior Add `(company_id, entity_type, entity_id, created_at)`. Keep the production task service and permission helpers unchanged. PostgreSQL reads backward until an event passes the existing exclusions. Reason and benefit Fresh paired measurements on the current base improve the full-description scoped SQL from 44.60 to 20.33 ms (2.19×). Activity buffer accesses fall from 63,547 to 4,796, and history rows per probe fall from 50 to one. The complete service median falls from 50.63 to 31.31 ms. Complete positional SQL results and service responses match. ## What Changed - Add generated migration `0414_closed_edwin_jarvis.sql` and the matching Drizzle index. - Use `CREATE INDEX CONCURRENTLY IF NOT EXISTS` through the existing top-level runner and invalid-index retry cleanup. The client change is one whitelist entry. - Preserve all upstream SQL and journal entries; retain snapshots 0410–0414. - Cover full and index projections, canonical ordering, invalid-index recovery, concurrent migrators, and incomplete fixture rejection. - Repair benchmark seeding, apply requested work memory to both connections, and record both settings. Hosted defaults now include six Slack conversations, 642 GitHub conversations, and 53 removed conversations. ## Verification - All final-head CI gates passed, including full workspace typechecks, tests, build, Runner checks, and all eight E2E shards. Greptile is 5/5 on `67ca7ae1cf15fc054ef515ffd8205b1fe30a0d55`; no unresolved review threads remain. - Local database/server typechecks and migration numbering/safety checks pass. Three server regression tests and three migration regression suites pass on real PostgreSQL. - The original pre-index work guard fails at eight rows per probe; the indexed guard now checks both the full-description query and index projection. The service oracle covers cleanup/inbox exclusions, raw text IDs, company scope, comments, ties, sort directions, visibility before pagination, empty lists, and one child per parent. - The documented pre-index seed command reproduced the review failure before the fix and now succeeds. A paired run with non-default memory confirms both independent connections use `16MB`. - Fresh proof pins pre-index base `929e840595c8933ca485ac7a2e99413e1e11ca64`, with identical cloned data, unchanged generated SQL and parameters, two warmups, and five alternating samples per arm. All 18 comparison cells preserve every positional row and complete service response. The 15-case default-memory matrix passes its physical-work, speed, and control bounds. - The one-visible-task control is 6.64 → 7.25 ms SQL; the 20-task control is 3.71 → 3.72 ms. Both pass the declared 25% or 2 ms budget. Full-query memory controls use matching `4MB` or `16MB` settings. - Committed 1,000-row write batches measured 40.09 → 43.17 ms median (+7.7%). Ranges overlap (34.67–71.85 and 34.27–48.05 ms); this is an observed local cost, not a precise throughput guarantee. - The final-numbered migration builds a valid index through the normal runner on the fresh 300,000-row fixture in 0.55 s. Earlier large-fixture proof of the same index SQL used 5,000 tasks and 1.25M activity rows: 2.58 s first apply, concurrent write/read probes 5.16/2.43 ms, interrupted invalid-index cleanup, successful retry, and one receipt. Current migration recovery tests verify the renumbered path. - [The proof document](https://github.com/paperclipai/paperclip/blob/67ca7ae1cf15fc054ef515ffd8205b1fe30a0d55/docs/performance/task-list-activity-index.md) retains the historical baseline, rejected rewrites, and the earlier matrix invalidated by severe host contention. Those historical timings are not substituted for the fresh measurements above. ## Risks The migration is an exception after measured query-only alternatives failed. The index adds storage and work to every activity write: about 30 MiB for 300,000 rows and 123 MiB for 1.25M rows. Concurrent creation avoids the writer blocking observed with an ordinary index build, but long transactions can delay it. Local timing does not establish Neon build duration. The query still ranks all eligible tasks, and excluded newer events still need to be skipped. These are local SQL/service measurements; deployed HTTP latency remains unverified. No hosted DDL or deployment was performed. ## Model Used OpenAI Codex, GPT-6 family, with reasoning, code execution, and tool use. The environment does not expose the exact model identifier or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either linked existing issues or described the issue using the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links - [x] My branch name describes the change and contains no internal issue id - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-29 09:06:41 -05:00
DottaandPaperclip	b81b870732	Add QA smoke journeys and OpenCode run traces (#18098 ) ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Product E2E journeys verify saved application behavior across deployments. > - Task creation and questions need reusable smoke selections and exact run attribution. > - Operators also need to inspect the OpenCode execution behind a measured question. > - Company observability does not currently support native OpenCode. > - This change adds the journeys and a bounded projection of normalized OpenCode run events. > - The projection follows the configured capture policy and retains the current run identity across warm reuse. ## Linked Issues or Issue Description Related foundation: #17262. Related alternative: #17989 exports metadata from OpenCode's native OTLP stream. This change uses normalized run events to support the existing content switches and per-run linkage. It does not forward the native stream. The two PRs overlap in launch registration and must be reconciled before both land. What existing behavior does this improve? Reusable Product E2E smoke selections and company observability for native OpenCode. Current behavior The journey catalog lacks reusable task creation and attached-agent question checks. Native OpenCode is marked unsupported for company observability, so a successful destination connection test does not prove that agent traces will appear. Proposed behavior Add explicit task-create and ask-question selections. Verify saved state and exact company, issue, agent, model, environment and successful run attribution. Export normalized OpenCode turns, tools and usage to the configured OTLP destination. Honor each capture switch and redact known secrets. Reason and benefit CI can run a small measured smoke selection, retain its screenshots and checks, and link results to traces belonging to the same run. Breaking changes Existing selectors remain unchanged. OpenCode export is opt-in through existing company settings. Legacy OpenCode stays unsupported. ## What Changed - Add reusable task creation and question journeys, configured-agent capability, owned-fixture checkpoints and strict evidence validation. - Add an OpenCode-owned projection of normalized run events. No provider SDK or raw payload schema enters heartbeat coordination. - Extend the private launch union and reserved environment allowlist for native OpenCode. With export disabled, no receiver request runs. - Keep destination headers in the parent wrapper and out of the actual provider child environment and configuration. - Bound each turn to 64 tool and 64 usage entries, 8 KiB per text field and a 1 MiB request. Use a three-second request deadline, four concurrent exports, and no retries or idle worker. - Pass the rotated runner authority to each proxy turn. A retained process no longer attributes later turns to its original launch run. - Update settings copy, observability documentation and capability maps. ## Verification - `pnpm -r typecheck` and `pnpm build` passed after the implementation changes. - Adapter launch/redaction: 9 tests passed. Projection and actual proxy: 12 tests passed before the review fix; the expanded projection suite passed all 12 cases after the fix. The proxy test exercises two runs in one process against a real local HTTP receiver and a fake provider. - Full OpenCode driver/projection suite: 72 passed, one existing response_wake test timed out at five seconds. A focused check then passed both existing omitted-continuation cases and the new trace export case. The timeout cause remains unconfirmed. - Runner package TypeScript and Rust `cargo check` passed. Map and UI token checks passed. - Prior journey validation: 273 tests across 12 files and the journey TypeScript check passed. - Broad local `pnpm test:run` encountered native-runtime integration failures with repeated embedded PostgreSQL initialization failures and was stopped. All 16 failing cases passed in an isolated run outside the filesystem sandbox (961 unrelated cases unselected). The broad local run is not a clean acceptance result. A later focused database-backed chat/heartbeat run passed all six selected observability cases, including native OpenCode launch and successful allocation (1,809 unrelated cases were unselected). - All CI gates passed for `21085f880d8babc9efeb22d0623db99613d33093`, including packaged-runner, clean-install, browser and build checks: https://github.com/paperclipai/paperclip/actions/runs/40884658995 . Greptile reviewed the same commit at 5/5 with no unresolved findings. - Verified OTLP JSON acceptance and indexing with an explicitly synthetic transport marker. No live OpenCode model trace or deployed smoke acceptance is claimed yet. ## Risks Export is best effort. Abrupt termination, recovered in-flight turns without a new submitted event, limits or receiver failure can lose traces. Export failure does not change task success. The projection represents observed normalized events, not raw native model spans or hidden reasoning. Known-secret redaction is not an OS isolation boundary. UI changes can break journey locators. Deployment adapters retain credential, ownership and cleanup responsibility. Both the controller and native runner bundle must be updated before live qualification. ## Model Used OpenAI Codex, GPT-6, with reasoning, code execution and browser tools. The exact serving model ID and context size are not exposed to this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass (targeted suites; broad local limitation documented above) - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-29 08:57:12 -05:00
DottaandPaperclip	7d8d1fbc1d	fix(adapter-utils): provide a default author for local commits (#18094 ) <!-- entire-trail-link-start --> https://entire.com/gh/paperclipai/-/trails/209/changes/paperclip/209 <!-- entire-trail-link-end --> ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Agents use managed launchers for Git and GitHub commands. > - These launchers exclude host credentials and host Git identity. > - A checkout without an author cannot save a local commit when managed GitHub identity is absent. > - A local author default belongs in the launcher that owns this isolation. > - This pull request supplies a private Paperclip default and preserves explicit and managed identity selection. > - Agents can save local work without manual author setup or extra GitHub access. ## Linked Issues or Issue Description What happened? An ordinary `git commit` fails with `Author identity unknown` in a fresh checkout without author settings or a usable managed GitHub identity. An agent must set its own author to continue. Expected behavior The managed launcher supplies a default local author. Repository and command settings override that default. A current managed identity retains its existing precedence. Steps to reproduce Run the managed launcher in a fresh Git repository without author settings or broker credentials. Add a file, then run `git commit -m work`. Paperclip version or commit Reproduced at `063cfd43813cabf18417605fb9eefb9aacf95c8d` on Linux with Node 25.9.0 and pnpm 9.15.4. Deployment mode Managed sandbox execution. The shared launcher also serves local and SSH execution that selects managed access. Related: #16662 changes precedence for a connected GitHub account. #8945 assigns identity to managed worktrees. This repair supplies the missing anonymous launcher default and keeps the current managed precedence. It does not require either change. ### Hypothesis and thesis for a fix Hypothesis: The launcher removes inherited author variables and host Git config. Without a broker identity or explicit repository settings, it has no author. Four real-Git cases reproduce the reported error on the base revision. Thesis for a fix: Put `Paperclip <noreply@paperclip.ing>` in a private Git config for each operation. Git treats it as global config, so repository and command settings can override it. The existing broker environment still takes precedence. Do not store a person's identity in shared checkout config, where it could remain after steering or revocation. The default grants no GitHub access. ## What Changed - Write the default author to the existing private operation directory with mode `0600`. Remove it when the operation exits. - Point managed Git at this file while keeping host global/system config, credentials and SSH identity excluded. - Add real-Git regressions for missing, absent, unavailable and rejected access. Preserve explicit overrides, identity changes and revocation controls. - Verify two shell commits through normal launcher staging and a commit after anonymous heartbeat cleanup. Check saved files, commit metadata and temporary config cleanup. - Update identity documentation and the two run map recipes. ## Verification - Red: the four new local-commit cases fail on the base launcher with `Author identity unknown`. - Green: all 80 focused tests pass in one run across `github-launcher.test.ts`, `github-launcher-environment.test.ts`, `heartbeat-github-launchers.test.ts` and `native-github-access.test.ts` (23.31 seconds). - A controlled filesystem failure first made the candidate discard valid managed credentials. After the correction, the same real launcher process retains them. Default-author file failure does not change operation-directory readiness. - Review found a second failure: a partial write can leave invalid Git config. The real-process test failed before the repair with `fatal: bad config line` from `git status`. The launcher now selects the default file only after the write succeeds. Both write-failure cases retain managed credentials, allow status, require identity when no default is available, and save a commit with explicit identity. The test reads the stored commit metadata with real Git. - Real shells, generated launchers and Git create and inspect saved commits. Sandbox transport and broker replies use controlled fixtures. No live cloud rollout or GitHub write acceptance is claimed. - The isolated test process excludes inherited task launcher paths, Git config and broker authentication variables. An initial run exposed those test-environment inputs; the isolated replay passed. The heartbeat assertion now checks the private default file and its cleanup instead of expecting `/dev/null`. - Adapter-utils typecheck and build pass. Map validation and `git diff --check` pass. - Conflict repair on 2026-10-29: merged master `fa5e70faf47ef2ca20bf2daf95b7503c94469b89` into the PR branch. Resolved 19 conflict paths by retaining master for unrelated files. All seven Git identity files remain byte-for-byte equal to the reviewed fix. The final diff is seven files, 145 additions and 15 deletions. - At head `c501e3f28369d404c91082b89188dc150c9362a9`, all 80 focused tests pass again (37.53 seconds). Adapter-utils typecheck and build pass. Map validation and migration checks pass. The PR diff passes `git diff --check`. - Full workspace typecheck and build were attempted again. Both stop because this sandbox has no Rust `cargo`. The duplicate full local Vitest run was stopped after about five minutes without a final result while full CI was running. The earlier full local attempt was stopped without a final result. No local full-suite pass is claimed. - GitHub now reports the PR as mergeable. All current-head checks have completed. [Full CI run 40878973679](https://github.com/paperclipai/paperclip/actions/runs/40878973679) passes, including typecheck, build, Rust, test shards and all eight E2E shards. The exact-head check inventory has 54 successes, one neutral Paperclip Review and two Storybook skips. Snyk passes. Greptile and Paperclip each reviewed `c501e3f28369d404c91082b89188dc150c9362a9` at 5/5 with no actionable findings. All review threads are resolved. GitHub reports the PR as clean and mergeable. - The prior CI run had one failed E2E test: `a lost creation response requires reload and cannot blindly replay commands`. Its YAML parser received page text that starts with `Skip to Main Content`. The new run passes E2E shard 7/8 and the full E2E gate. The prior failure remains part of this record. A passing run does not establish the earlier failure's cause. This change does not alter that test or the agent configuration UI. ## Risks - Commits without explicit or managed identity now use the generic Paperclip author. Operators can still set repository or command identity. - `git config --global` writes to temporary operation config and does not persist. The documentation states this behavior. - If the private config directory cannot be prepared, commits still need explicit identity. Existing redacted diagnostics and credential isolation remain. - One small synchronous file write is added to a directory the launcher already creates. No new subprocess, network request, persistent identity or authority cache is added. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used OpenAI Codex, based on GPT-6, with reasoning, shell execution and tool use. The runtime does not expose the exact model ID or context window size to this agent. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-29 08:56:12 -05:00
Dotta Paperclip Codex	4c56702e06	fix(server): schedule retained native-session cleanup (#17717 ) ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Native runs can retain a local session after an interrupted durable suspend. > - The orphan reaper repeatedly scans completed history for that cleanup duty. > - Idle scans keep the database active. Removing them requires complete wake and ownership paths. > - This pull request moves retained-session cleanup to committed signals, local release events and saved deadlines. > - Existing physical proof checks still decide whether cleanup is safe. The shared scheduler does not grant execution authority. > - The benefit is quiet retained history with recoverable cleanup and owned shutdown. ## Linked Issues or Issue Description Refs #17709 and #18135. This is slice 51 of the existing recurring-server sleep stack. Both referenced dependencies have merged. The target is `master`. What happened? The periodic orphan pass scans retained native sessions even after their cleanup is complete or no automatic action is safe. Some eligible sessions also depend on a local session, environment lease or original maintenance callback releasing ownership. An earlier decision notification can be consumed before the run's later terminal projection commits. Expected behavior Reconstruct existing work at startup. Wake from committed writes and actual owner release. Register the saved claim expiry or a probe for a specific live process. Stop recurring discovery when no obligation remains. Preserve original callback ownership and all existing cleanup proof checks. Steps to reproduce 1. Retain completed native runs with a durable-suspend close failure. 2. Let the periodic orphan pass run with no new work. 3. Observe repeated cleanup discovery. Separately, delay terminal projection after its decision notification is consumed and observe the missing cleanup wake. Paperclip version or commit Parent #17709 at reviewed head `3b75f4bc1da1370304f069fc287af3d693575716`, landed as `df6156c2e37f542a69f393dde31e357b82b7cac1`. Current integrated master: `31b927e3013a8a4b3266854b740cf40a24753788`. ## What Changed - Move scoped, paged discovery to the retained cleanup owner. Preserve explicit manual recovery. - Register the duty with the shared scheduler and remove it from the periodic orphan pass. Keep concrete lease expiry and live-process probe obligations. - Use typed outcomes for settled/refused work and process, session, environment, maintenance or lease waits. Keep physical proof and quarantine decisions in the executor. - Wake from committed finalization and terminal projection writes, durable process/lease release, and local session or callback settlement. Routine company-only finalization hints leave dormant cleanup quiet. - Join duplicate cleanup and serialize inspections on one database lane. Keep original Runner callbacks owned until settlement and shutdown. - Preserve all master profile fixtures and the branch's historical identities. Save the colliding sleep profile 79 separately. Generate combined Copilot profile 80 from its source and retain master's other provider profiles. - Add the owner audit and regression coverage. No new table, migration or independent maintenance timer is added. ## Verification - Server acceptance: 2,342 distinct passing cases in 18 complete files. The 14-file unaffected group contributes 1,532 passes. Full startup contributes 76, process recovery 410, environment service 51, and external-chat response 273. The 29-case cleanup worker suite and 977-case executor suite run in full. No case in these files is skipped. - Controlled scope regression: removing only the ordinary finalization issue/run guard wakes dormant retained cleanup; the same assertion passes after restoring it. A real local owner release still resumes the durable candidate. - Preserve the first broad failure: 1,607 passed and one startup shutdown case failed because the coordinator mock lacked `stop()`. Add only that mock method. All 76 unchanged startup cases then pass. Do not treat the first broad command as green. - Dedicated PostgreSQL 17 databases use the existing migration 413 schema. Embedded-only fixtures use the existing recovery helper with fresh per-call databases. All temporary imports are restored byte-exact. No assertion or timeout is relaxed. - Current-master integration preserves both complete source histories. The server, UI and database trees are identical to the server-tested source. All master historical profile fixtures remain byte-exact. The prepared sleep profile 79 remains independently inspectable. - Current runtime validation at `d08f764e3efe75e96929173afe7ee8739121ad9f` passes all 12 commands (22 installed ACPX/Grok contract cases and 26 native-provider Rust cases): `pnpm install --frozen-lockfile --ignore-scripts`; Copilot/Grok identity and generated profile checks; Runner and server typechecking; server build; Copilot/Pi installation, profile compatibility and transport settlement files (130 passed; one opt-in closed Pi snapshot case skipped because its distribution root is not configured); installed ACPX model/reconnect package contract and Grok identity tests; Rust native-provider backend tests; module boundaries and migration order. - Earlier 94-case installation/settlement acceptance applies to the prepared profile 79 source. It is retained as history and does not substitute for the current profile 80 validation above. - Failure history and duty-specific evidence remain in `doc/plans/2026-10-26-retained-native-session-cleanup-sleep-audit.md`. Exact-current-head acceptance: all 60 checks are clean, including protected CI and security; Greptile gives 5/5 for `281d579de0d08e907194b8b790a0597b07d16b7b` with no actionable findings. No Ponytail review is present under the authorized missing-review policy. - These checks do not claim a full local repository suite, live Copilot or Daytona qualification, deployed host/database suspension, or measured cost savings. ## Risks - Missing a supported producer could strand cleanup. Tests exercise real finalizer, heartbeat, environment and process writers. Process-local signals cover in-process writers; no multi-replica or external SQL notification transport is added. - A timeout can leave an original callback active. Cleanup and shutdown must keep waiting for it. The existing global maintenance drain is conservative across roots. - A retained live process still has a scoped 30-second absence probe. A saved lease keeps its actual deadline. Operational errors retain retry work. Immutable proof refusals and operator-required histories do not gain automatic retry authority. - Cleanup keeps all existing artifact, identity, claim, no-launch and quarantine checks. Terminal status alone does not authorize physical cleanup. - This PR does not expand Cloud alarm coverage or relax host sleep eligibility. It proves worker behavior, not deployed app/database suspension. - The Copilot source identity has changed; these checks do not claim new live provider qualification. - The parent has merged. This PR is merged only after its current-head protected CI and review gates pass under the existing campaign authorization. ## Model Used OpenAI Codex, GPT-6 family, with code execution and repository tools. The exact serving variant and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> Co-authored-by: Codex <noreply@openai.com>	2026-10-29 04:24:57 -05:00
Nicky LeachandPaperclip	aa75ec9d56	Replay Claude native options on ACP reconnect (#18135 ) ## Thinking Path > - Paperclip manages agents and their task execution. > - Runner uses ACPX to connect to Claude sessions. > - Claude receives native options when ACPX creates a session. > - ACPX omits those options when it loads or resumes the same session. > - A reconnect can lose allowed tools, instructions, and settings sources. > - This pull request replays the existing options through the existing Claude metadata contract. > - Resumed tasks keep the configuration admitted for their session. ## Linked Issues or Issue Description What happened? A Claude task can complete its first turn and then fail on a warm follow-up. The provider refuses an internal completion tool because `session/load` omits the `allowedTools` options sent with `session/new`. The same omission exists on `session/resume`. Expected behavior Creation, load, and resume must supply the same caller-selected native session options. The existing policy for native user settings must stay unchanged. Steps to reproduce Create a persistent Claude ACP session with an explicit allowed-tool list and appended instructions. Complete a turn, close its connection, and reconnect to the saved session. Inspect the ACP request. Before this change, the reconnect has no `_meta` field. Paperclip version or commit Reproduced on Runner source `e8b78cce5bb557b086bee9ca930eeaab1d09b244`. The offline protocol regression also fails on the current base `80a2b9284bf189e93ca4313085814548f48b8dc8`. Related: #18089 added prepared harness storage. #11798 concerns the separate legacy adapter and does not fix Runner reconnect metadata. ## Upstream status and backport scope ACPX [0.21.1](https://github.com/openclaw/acpx/releases/tag/v0.21.1) already replays session metadata on load and resume in its [released client implementation](https://github.com/openclaw/acpx/blob/v0.21.1/src/acp/client.ts). This PR backports that behavior to the currently qualified 0.13.1 integration. The released 0.21.1 runtime does not expose equivalents for all hooks used by Runner's existing patch: verified executable spawning, synchronous protocol admission guards, provider extension dispatch, and response-delivery receipts. Upgrading requires a compatibility pass that preserves these guarantees and removes local changes already covered upstream. This backport does not add a new Paperclip-specific dependency contract. ## What Changed - Replay existing Claude native options on `session/load` and `session/resume` through the same metadata builder used at creation. Other providers keep their existing reconnect requests. - Test both reconnect methods against the installed ACPX manager and a local ACP wire fixture. Cover allowed tools, model, turn limit, instructions, and both existing settings-source modes. - Update exact source attestations and generated profile declarations required by the shared ACPX patch. Keep historical fixtures unchanged. - Document the reconnect contract. No new home mode, plugin policy, or provider permission rule is added. ## Verification - Confirmed the new load and resume tests fail before the patch because metadata is absent. - Applied the canonical patch to pristine package bytes and confirmed it matches the tested runtime. - Targeted installed-package model-selection and reconnect suite plus changed Grok identity tests: 22 passed. - Rechecked the four new reconnect cases against the cleanly applied patch, with explicit expected values for all supplied options. - Three targeted current-profile and revision-boundary assertions pass locally. Updated the native Pi test digest; native compilation and execution remain in CI. - Maintained profile generators pass their consistency checks. - GitHub CI is green, including typecheck, native Runner checks, package contracts, packaged installation, build, and server/browser suites. One unrelated server database-cleanup timeout passed on the bounded failed-job rerun. No comprehensive local suite was run. Live post-deployment acceptance remains pending. ## Risks Claude reconnects now receive the same native settings sources and options as creation. This corrects configuration loss without changing caller policy. The shared dependency patch requires new source identities for other attested profiles; their reconnect behavior is unchanged. No database migration is required. ## Model Used OpenAI Codex, GPT-6 family, with code and tool use. Exact deployment ID and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-29 01:45:18 -07:00
Dotta Paperclip Codex	79ce86630a	fix(server): schedule governed review response recovery (#17702 ) ## Thinking Path > - Paperclip manages agents, tasks and their external chat responses. > - A completed chat turn can owe a response while an earlier review gate remains pending. > - Periodic recovery revisits that response history even when no work can advance. > - This change uses the existing delivery coordinator and saved retry deadlines. > - Approval, interaction and authority changes wake the affected issue or run after commit. > - The existing presentation owner verifies the durable result and current authority. > - Settled and dormant history becomes quiet without losing future eligible responses. ## Linked Issues or Issue Description Refs #17696 (merged) and #15625. This is slice 49, now based on master. It owns governed-review response presentation. Accepted responses and pending decision effects keep their existing owners. What happened? Native finalization recovery repeatedly inspects committed review responses. Removing the scan without covering approval, interaction, task-policy and authority changes would strand responses that become eligible later. Expected behavior Recover an owed response once from existing durable facts. Enforce authority at publication, wake after relevant outer transactions commit, retain real retry deadlines and restart/drain recovery, and stop recurring SQL when no response can advance. Steps to reproduce Complete an external chat turn while an earlier completion review remains pending. Block its response behind an approval or interaction, then resolve that blocker. The response must appear once without a periodic scan or resolving the original review gate. ## What Changed - Add a scoped governed-review worker using the existing coordinator, finalizations, decisions and comment receipts. No queue table or transaction wrapper is added. - Keep recovery and publication policy in the native finalizer. Preserve binding, source/session authority, ownership, deadline and deleted-comment fences; match coordinator-before-issue lock ordering. - Notify through actual approval, interaction, OAuth, task-policy and lifecycle producers before their owned writes. Serialize approval resolution with task linking so a concurrent link retains its wake. Nested transactions still settle at outer commit. - Scope ordinary milestones, finalization and coalesced input to their issue/run. Use the explicit company authority boundary for genuine global restoration, including membership changes. Both response workers share this boundary. - Register under maintenance and drain gates, disable the two periodic repair entrances, and retain fresh finalization and explicit recovery. Add the concurrent 0413 comment-receipt index and migration registration; retain five snapshots. - Preserve the producer inventory, source qualifications and earlier failures in the owner audit. Retain a real Photon regression proving routine ownership assertions stay quiet and concurrent authority restoration wakes each worker once. ## Verification - Scoped repair source `2341714720b5c273f0ce011b48345af0ef39227f` passes 2053 distinct cases: 1703 in 15 complete producer/authority/recovery files, including all 273 governed-response cases and 95 wake-queue adapter cases, plus 350 selected chat cases. Another 1463 chat cases are outside that selection. Thirteen fresh PostgreSQL 17 fixtures migrate through unchanged 0413; the one temporary queue-fixture import restores exactly. All sixteen captured hashes match. - Two actual repeated coarse-hint SQL regressions fail before repair and pass afterward. Actual membership restoration passes before and after. The same assertions and time limits prove dormant work stays quiet and real authority restoration still publishes once. Real coalesced input covers both queues after commit. - Combined source `586f5674cd9798b33cd22437255e0480b5726d20`, including independent master #18129, passes 1297 distinct cases: 1093 in five complete server files, 185 in five runner files, 14 Node protocol cases and five UI registry cases. This includes the complete 22-case Photon file for both response workers. The external Photon transport is mocked; Paperclip callbacks, transaction fences and observed SQL are real. The earlier and combined case counts are separate, with no cumulative double-counting. - A normal merge retains both complete owned and independent master binary patches. All twelve new-context hashes and sixteen earlier repair hashes match. Three dedicated fresh 0413 fixtures plus the live-event helper's own fresh database use PostgreSQL 17 without source adaptations. Database build, server types/build, boundaries, full-SHA migration order and generated TS/Rust profiles pass. The new inherited Runner vendor inputs rebuild successfully. - Database bytes remain identical to the previously qualified 0413 source. The recorded populated 0412-to0413 upgrade retains all 411 prior receipts and 38 companies, appends one receipt and none on replay; the index is valid and ready. The earlier 2828-case acceptance, CLI journey, setup failures and their repairs retain their recorded source scope in `doc/plans/2026-10-26-governed-review-response-sleep-audit.md`. - Parent #17696 merged with 58 clean checks, Greptile 5/5 and Ponytail 5/5. Its Photon warning was disproved by real callback/SQL evidence and the security check became successful. This PR still requires its own fresh exact-head CI and review gates. No deployed sleep, external alarm or fleet savings claim is made. ## Risks - Notifications use the existing process-local writer contract. Independent SQL writers and uncoordinated replicas are outside its coverage. - Genuine startup and company authority reconstruction remain proportional to the owed backlog. Queries page 100 rows, but discovery accumulates the candidates; this is not a constant-cost global operation. - Current publication authorization, durable binding, ownership and lock ordering remain mandatory. The worker does not resolve the original review gate. - The concurrent index uses existing migration replay handling. Other recovery duties and Cloud sleep eligibility remain separate. ## Model Used OpenAI Codex, GPT-6 family, with reasoning, repository tools, shell execution and PostgreSQL tests. The runtime does not expose a more specific serving snapshot or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> Co-authored-by: Codex <noreply@openai.com>	2026-10-29 02:54:46 -05:00
Nicky LeachandPaperclip	80a2b9284b	Define durable runtime activity events (#18129 ) ## Thinking Path > - Paperclip manages agents and tasks. > - Runner reports durable run events through PRP. > - Runtime clients need a typed record of reported activity. > - The event must keep the normal run authority and read boundaries. > - This pull request adds the generic runtime activity event contract. > - Later PRs can publish and consume this contract without private plugin coupling. ## Linked Issues or Issue Description First feature prerequisite extracted from #18050. Runner publishing is #18050; the dependent consumer is #18131. Related independent test stability work: #18128. The parent search and review history is preserved in [the verification archive](https://github.com/paperclipai/paperclip/pull/18050#issuecomment-6489369676). Subsystem affected Runner event protocol, server run-event persistence and redaction, and UI event taxonomy. Problem or motivation Core needs a durable, typed activity record tied to the authenticated run. A text marker is not an event contract. Proposed solution Add `runtime.activity.recorded` as a P1 event with a closed `{ namespace, activityKey }` payload. Runner knows no plugin or panel identity. Run/session identity, sequence and emission time stay in the outer envelope; Core resolves company, task and agent through the authorized run binding. Use the existing authenticated persistence, acknowledgement, replay and redaction paths. ## What Changed - Define and validate the event in PRP v1, v2 and v3. Update the generated protocol artifacts and event catalog. - Preserve saved and live event redaction. Test persistence, replay deduplication and the existing run-read boundary. - Register the event in the UI taxonomy without changing panel display behavior. - Advance the source-bound Copilot identity to 78. Retain all published historical identity fixtures without changing their bytes. ## Verification - Root `pnpm typecheck` and `pnpm build`: passed for the revised activity contract. - Node protocol checks: 14 passed. Provider identity and registry tests: 185 passed. Server tests: 103 passed. UI event registry: five passed. - Maintained Grok and Copilot identity generator checks and `git diff --check`: passed. - The first activity-contract review scored 4/5 because the dependent producer and readers still used the earlier contract. Both dependent PRs are now updated and restacked; the finding is resolved and review is running again. - Initial extraction retained a consumer-only import in one server suite. That suite failed to load. The consumer case and import were moved out; the final three server files passed all 103 cases. - Earlier panel-specific head `6137c50bc` had green CI and standard/Apex 5/5. Those scores do not qualify this revised activity contract. Fresh CI and reviews are pending. Earlier combined results in the archive apply only to their recorded source revisions. ## Risks This change is additive. It adds no route, publisher, filesystem transport, provider sandbox grant, or panel display behavior. Activation hints grant no permission to read a plugin view. Provider identities bind the changed protocol source; historical identities remain decode-only. No schema migration or dependency change is required. ## Model Used OpenAI Codex, based on GPT-6, with reasoning, repository tools and code execution. The exact serving snapshot is not exposed. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-29 00:32:12 -07:00
Dotta Paperclip Codex	ec3b558277	fix(server): schedule accepted native response recovery (#17696 ) ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Native runs store accepted results and their finalization decisions. > - A completed run can still owe its public answer after an interruption. > - Periodic recovery scans for that answer even when no new work exists. > - This pull request wakes recovery from committed changes and saved retry deadlines. > - The existing owner still verifies the result, source, and current publication authority. > - Settled or dormant response work no longer needs its own periodic scan. ## Linked Issues or Issue Description Refs #17690 (merged). This is slice 48 of the sleep migration stack, now based on master. Related: #17661 handles GitHub terminal publication; this change handles native accepted-response presentation. Governed-review presentation remains a separate duty. What happened? Native finalization recovery repeatedly checks already accepted results for a missing answer. Removing that check without complete notifications would lose responses when evidence arrives late, an agent resumes, or admission settles after execution. Expected behavior Recover the answer from its saved result when a supported change makes it eligible. Retain real retry deadlines. Stop querying when the answer is selected or cannot currently be published. Reconstruct work after restart. Steps to reproduce 1. Commit a native accepted result with no selected response comment. 2. Run finalization recovery while its source is unavailable or locked. 3. Restore that source or release the lock. The answer must appear once without repeating provider execution. ## What Changed - Honor recorded non-create decisions and skip-comment policy in both discovery and recovery. Apply durable conversation/result/continuation guards before recovery locks. Preserve genuine unanswered and legacy recovery. - Scope routine response wakes to the affected issue/run. Coalesced input names its active run; pending-effect settlement names its issue. Sixteen existing global authority/configuration hooks use one explicit company invalidation boundary. No new transaction wrappers or tables are added. - Add an accepted-response worker using the existing delivery coordinator and scoped deadline helper. Preserve saved retry deadlines and pending-effect fences under the owner's lock. - Share the finalization notification boundary. Wake on finalization settlement, exact accepted-result/final-message evidence, agent availability, retry admission, and existing chat authority changes. - Keep lifecycle policy in services. A narrow pre-write status hook lets lifecycle retain ownership of its transaction and status transitions. - Register the worker during enabled maintenance startup. Remove its authority subscription on shutdown. Periodic replay skips this duty on both committed and fresh-commit paths; ordinary finalization and explicit recovery retain their behavior. - Add a partial index and expression statistics for unpresented native runs. Migration 0412 supports concurrent replay and adds no queue table. - Add real PostgreSQL and lifecycle coverage. Preserve the implementation and producer audit in the plan document. ## Verification - Additional real Photon callback acceptance on the published production code disproves the security warning: ten active assertions cause zero response-recovery hints/SELECTs, while three concurrent assertions during an actual attention-to-active recovery cause exactly one wake/SELECT. The existing locked status guard already enforces this boundary. No production change was needed; the resolved finding now has a successful current-head security check. The regression will be retained with the next slice. - Eligibility repair source `892f36e5f66ba1af123034936a7160c64c3ab883` passes 1489 distinct server cases: 1139 in six complete recovery/finalizer/monitor/summary/workspace suites (81.02 seconds), plus 350 selected chat cases (297.68s). Another 1463 chat cases are outside the pattern; the complete 1813-case file is not claimed. All eleven new regressions are included in that count. Five dedicated fresh PostgreSQL 17 databases migrate through unchanged 0412, with no fixture-source adaptations. Database build, server types/build, boundaries and full-SHA migration ordering pass. All seven test source hashes match. - The exact published baseline first fails eight behavioral assertions while the three genuine-answer cases pass. The same corrected test source passes all eleven after repair: recorded none/reuse remain suppressed; five ineligible history families take zero recovery row locks across repeated issue hints; missing/legacy/create-null answers still publish once; fresh periodic finalization defers presentation to its worker. Earlier fixture setup and variable/compiler failures remain explained in the audit, rather than erased by later success. - Repair source `2fc8b0614aaf9ac7337045de4ced7325f95edc45` passes 1821 server cases: 1496 in 13 complete producer/lifecycle/authority suites (110.63 seconds), plus 325 selected chat cases (278.99 seconds). Coverage includes all native-session cases, queue admission, status decisions, membership/board access, the complete GitHub workflow, accepted-response lifecycle and real authority restoration. The other 1477 chat cases are outside this selection; the complete 1802-case file is not claimed for this repair run. - Actual PostgreSQL regressions first reproduce a coalesced-input hint missing its run scope and two routine hint paths producing 12 response-history SELECTs each after three notifications. The same assertions pass with run-scoped coalescing and zero response-history SELECTs for unscoped routine hints. Actual membership restoration still publishes the waiting response once. Assertion time limits are unchanged; this measures real driver SQL and persisted producer work. - Eleven dedicated fresh PostgreSQL 17 databases migrate through 0412. One embedded-only wake-queue fixture import temporarily uses its own external database and restores byte for byte. All 14 selected source files match pre-run hashes. This qualifies external-database behavior rather than reproducing embedded CI locally. - Master advanced independently with #18126's Pi archive retry fix. Normal merge `2a535bc61259ef99387369e8b32498f774e5ba2c` preserves both complete binary patches. All accepted server/database/UI/test/CLI trees stay identical; the three independent runner installer/manifest files are retained. All 13 installer tests pass, including stalled header/body cancellation. Combined server types/build, boundaries and full-SHA migration order pass. A subsequent normal merge of #18128 at `e8b78cce5bb557b086bee9ca930eeaab1d09b244` retains its three test-only file changes with both complete patches preserved. The changed HTTPS backfill case passes on a fresh PostgreSQL fixture (1 selected case; 178 outside the pattern), and combined types/build, boundaries and migration order pass again. All 14 repair source hashes remain unchanged. The independent browser fixture changes are preserved; no local browser run is claimed. - The earlier source `9feec170ef8174011fc3c5d3d6d76f0a0f39fea0` passed the 4171-case full baseline before this scope repair. That scope is preserved in the audit rather than represented as a current full rerun. All 0412 database bytes remain unchanged: original concurrent index/statistics/ANALYZE, prior executable history, journal entries and retained snapshots. Five snapshots 0408 through 0412 remain. The populated 0411-to0412 upgrade preserved 410 prior receipts and 38 companies, appended one receipt and none on replay; index/statistic checks passed. - The earlier P2 security failure, Greptile's former conditional dependency on #17702, and the subsequent actual Ponytail eligibility findings are recorded in `doc/plans/2026-10-25-native-response-presentation-sleep-audit.md`. This PR now includes the issue-scoped pending-effect notification fix itself, so it is independently correct before #17702. Fresh published-head CI, Greptile 5/5 and a clean security scan remain required. No deployed-sleep, external-wake or fleet-savings claim is made. ## Risks - The writer contract is process-local. Independent SQL writers and other replicas are not covered by these notifications. - Unpresented backlog reconstruction still has memory and time cost proportional to candidate count. Pages contain at most 100 rows; execution uses the shared fair batch. Selected history is excluded. Health-only signals do not trigger reconstruction. - Publication policy remains with its current owner. Digest, company/run binding, source authorization, selected-answer suppression, and ownership fences remain required. - The rest of native recovery and governed-review presentation still run separately. This PR does not relax Cloud sleep eligibility or add external wake coverage. - The stack parent has merged and its actual ancestry is reconciled. This publication still needs fresh current-head CI and review. ## Model Used OpenAI Codex, GPT-6 family, with reasoning, repository tools, shell execution, and PostgreSQL tests. The runtime does not expose a more specific model identifier or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> Co-authored-by: Codex <noreply@openai.com>	2026-10-29 02:31:20 -05:00
Devin FoleyandClaude Opus 5.5	522c653d56	fix(runner): retry stalled Pi Node archive downloads (#18126 ) <!-- entire-trail-link-start --> https://entire.com/gh/paperclipai/-/trails/230/changes/paperclip/230 <!-- entire-trail-link-end --> ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The master Docker image contains a runner provider pack, and the pack contains the Pi agent runtime > - The Pi materializer downloads a hash-pinned Node archive from nodejs.org during the image build > - That download has one 60 s timeout and no retry, so one stalled transfer stops the full amd64 image build > - Master Docker builds failed this way two times in two days, and the failure did not identify the request > - This pull request retries only transport failures of that download and keeps every security gate > - The benefit is fewer red master image builds from short nodejs.org stalls, and a clear error when all attempts fail ## Linked Issues or Issue Description No public issue exists. This is a bug report. What happened? The `Docker` workflow on `master` failed in the `build-and-push (linux/amd64)` job at `Dockerfile:163` (`runner-provider-pack`). `build-provider-pack.mjs` stopped with an uncaught `DOMException [TimeoutError]: The operation was aborted due to timeout`. The arm64 job of the same commit passed. The next master build passed without a code change. - https://github.com/paperclipai/paperclip/actions/runs/40686298026 (2026-10-28) - https://github.com/paperclipai/paperclip/actions/runs/40808852599 (2026-10-29) Steps to reproduce 1. Run `node packages/paperclip-runner/scripts/materialize-pi-distribution.mjs /tmp/pi-out` on linux-x64. 2. Make the transfer from nodejs.org stall for more than 60 s. 3. The script stops at once with an anonymous `TimeoutError`. Expected behavior A short network stall does not stop the build. If all attempts fail, the error identifies the Pi Node download. Evidence In both failed jobs, the uncaught timeout came about 60 s after the last provider-pack output line (61.18 s → 121.6 s, and 38.72 s → 99.15 s). The Pi Node archive fetch is the only provider download with a 60 s timeout. The Cursor and Copilot downloads use 120–180 s. ## What Changed - `materialize-pi-distribution.mjs`: add `downloadPinnedPiNodeArchive`. It tries the download up to 3 times. Each attempt has a new 60 s timeout. The timeout covers the headers and the full body. The backoff is 5 s, then 10 s. - Only transport failures cause a retry: timeout, network `TypeError`, HTTP 5xx and HTTP 429. - These failures stop at once, with no retry: SHA-256 pin mismatch, the 128 MiB size bound, HTTP 4xx, a missing body, and cancellation. The SHA-256 pin still checks every byte. - The body of each rejected (non-2xx) response is canceled before the next attempt, so a 5xx/429 reply does not hold its connection. - Each failed attempt writes a warning to the build log, so a later successful retry does not hide the failure. When all attempts fail, the error is `Pinned Pi Node download failed after 3 attempts: <cause>`. - `materialize-pi-distribution.test.mjs`: add tests for stalled headers and a stalled body that end only when the per-attempt deadline signal aborts, release of rejected responses before the next attempt, exhausted attempts, HTTP 503, and the fail-closed cases. - `package.json`: add `scripts/materialize-pi-distribution.test.mjs` to the `test:typescript:prep` node:test list. Before this change, no CI lane ran this test file. ## Verification - `node --test packages/paperclip-runner/scripts/materialize-pi-distribution.test.mjs` → 13 pass, 0 fail. - Red checks: with the old materializer, the new tests fail. When the body cancel is removed, the release test fails. When the deadline signal is removed from the fetch call, the deadline tests fail. - `cd packages/paperclip-runner && node ../../scripts/ci-profile/node-test.mjs scripts/candidate-provider-pack.test.mjs scripts/materialize-pi-distribution.test.mjs` → 20 pass, 0 fail. - `node --check` passes on the changed script. - I did not run the full `pnpm -r typecheck`, `pnpm test:run`, or `pnpm build` locally, because the sandbox has no installed workspace dependencies. The changed files are `.mjs` scripts and are not in the runner `tsconfig.json`. CI runs the full checks. - A reviewer can read the `Build and push by digest` log of the next master Docker run. A transient stall now shows `Pinned Pi Node download attempt 1/3 failed: ...; retrying`. ## Risks - Low risk. The change affects only the Pi Node archive download. Two callers use it: the Docker provider-pack build (`candidate-provider-pack.mjs`) and `paperclipai runtime setup pi` (`provision-pi.mjs`). - The worst-case time before failure increases from 60 s to about 195 s (3 × 60 s + 15 s of backoff). The Docker job has more time than this. `provision-pi.mjs` has a 900 s setup deadline that it enforces through `checkCancelled`. The download calls `checkCancelled` before each attempt, so the deadline and SIGINT/SIGTERM still stop setup. A cancel can wait for one backoff of at most 10 s. - For `runtime setup pi`, a stall now prints one warning line on stderr for each failed attempt. Normal operation prints nothing new. - The retry does not weaken integrity. The same SHA-256 pin, size bound, and `redirect: "error"` apply to each attempt. A mismatch does not cause a retry. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - Anthropic Claude Opus 5.5 (`claude-opus-5-5`) in Claude Code, with tool use (shell, file edit, GitHub connector). It read the failed CI logs, wrote the change and tests, and ran the tests locally. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>	2026-10-28 22:31:36 -07:00
Dotta Paperclip Codex	a8a038e659	fix(server): schedule native pending effect recovery (#17690 ) ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Native status decisions store effect targets and a delivery ledger. > - Historical pending or failed effects still need recovery. > - The periodic finalizer queries that ledger even when work is complete. > - This pull request gives pending effects their own commit-driven worker and saved deadlines. > - Completed history becomes quiet while incomplete effects remain recoverable. ## Linked Issues or Issue Description Refs #17687 (merged). This is slice 47 of the sleep migration stack, now based on master. What problem does this solve? Periodic native finalization repeatedly checks effect delivery. A tenant with completed history should not perform recurring SQL for this duty. Historical unresolved effects must still recover without duplicating their targets. Proposed solution Reconstruct current pending effects at startup. Wake from committed coordinator changes. Use the saved retry and ownership deadlines. Keep the existing dispatcher as the only recovery mutation owner. Alternatives considered A slower unconditional scan still creates idle traffic. A new queue table duplicates existing durable state. Replaying materialization can duplicate effects. This change uses the existing ledger, transaction signals, and shared scheduler. ## What Changed - Add a scoped worker with 100-row discovery pages and fair 25-entry dispatch batches. Delivered, superseded, and terminal-failure history has no recurring scan. - Preserve exact company/issue/run/decision binding and validate materialized targets before settling effects. Recheck phase, saved result, retry, and lease under the coordinator lock. Missing targets retain recovery. - Notify from decision replay, accepted-result recovery, coordinator claim/retry/release, attention replay, and execution-control recovery. Only two DB-only producer writes need a new transaction wrapper. Nested transactions use the existing outer-commit boundary. - Exclude pending-effect candidates from periodic finalization so it cannot skip ahead of their owner. Keep explicit and startup recovery behavior compatible. Respect maintenance disablement, drain, standby, and shutdown. - Add concurrent, idempotent migration 0411 with partial indexes for pending effects and their current coordinator binding. Retain the five newest schema snapshots. - Document producers, query evidence, failure history, and scope in `doc/plans/2026-10-25-native-pending-effects-sleep-audit.md`. ## Verification - Source `ba38ee465df02b6026286b5d5e15ae49fe07a367` passes all 2284 distinct cases across 25 complete files, without skips. The main selection passes 2225 in 203.94 seconds; safe-replacement passes 59 in 26.03 seconds. Coverage includes all 968 native-session cases, the 94-case status-authority/pending-effect corpus, actual decision/lease producers, Stop, queue, interaction, reconstruction and Slack consumers. The audit gives per-file counts. - The complete 94-case corpus passes again on the same database in 16.03 seconds. Retained PSC/OUT rows and an unrelated sentinel remain unchanged. The repeat is not counted again as distinct coverage. - Twenty-one separate fresh PostgreSQL 17 databases migrate through 0411 before setup. Four embedded-only fixture imports temporarily use their own external database on this IPC-exhausted host and are restored byte for byte. Assertions and timing limits stay unchanged. This qualifies external-database behavior; it does not claim an unmodified embedded CI run. - Database build, server typecheck/build, module boundaries and exact-head migration order pass. Original runtime/schema edits and unrelated upstream blobs are preserved. Both original concurrent index statements, all prior executable history, journal entries and retained snapshot bytes are unchanged; five snapshots 0407 through 0411 remain. - Populated 0410-to0411 upgrade preserves all 409 prior migration receipts and 38 companies, appends one receipt and adds none on replay. Both indexes are valid and ready on fresh and upgraded databases. - Adopting the latest prepared prerequisite changes ancestry and parent audits only. All accepted core trees remain identical. The audit retains earlier failures and qualifications. Actual landed-parent ancestry is now reconciled; fresh published-head CI and exact-head Greptile 5/5 remain required. No deployed sleep, Cloud-wake or fleet-cost claim is made. - Current parent context: integration `5f7cd7bc589ad0169dfb5f33df611ead56510ca3` changes only the parent's GitHub observation bound and independent cleanup assertion. All production code, packages and 25 accepted test files remain unchanged. Both focused GitHub idle cases pass in 15.26 seconds and the complete six-case cleanup suite passes in 8.47 seconds on two fresh 0411 PostgreSQL fixtures. This does not claim the full parent workflow was rerun here. ## Risks - A missing producer can delay work until restart. The audit covers current supported writers. Independent SQL and other processes remain outside the local notification contract. - Recovery validates existing targets; it cannot recreate a missing target or silently mark it delivered. Such work retains an error and retry. - The indexes add write/storage cost and use the existing restart-safe concurrent migration runner. - Other finalization duties still poll until their separate migrations. This PR does not prove host/database suspension, extend Cloud alarms, or claim fleet savings. - The actual prerequisite squash is adopted through a normal merge. Its complete tree equals the reviewed parent, and the complete accepted child tree is preserved. Fresh published-head CI and review remain required. ## Model Used OpenAI Codex, based on GPT-6, with reasoning and code-execution tools. The exact serving model ID and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> Co-authored-by: Codex <noreply@openai.com>	2026-10-29 00:28:00 -05:00
DottaandPaperclip	4e715eb7ea	fix(server): schedule historical unsafe export recovery (#17687 ) ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Native runs can retain accepted results after an unsafe workspace export fails. > - Historical recovery can retire an old notice or resume the accepted result without another provider turn. > - The periodic reaper repeatedly scans failures that cannot currently recover. > - Existing rows and committed changes can identify the actual recovery obligation. > - This pull request wakes recovery from those changes and retries only owed work. > - Dormant history becomes quiet while ownership and explicit operator decisions remain protected. ## Linked Issues or Issue Description What happened? The native finalization reaper repeatedly visits historical unsafe workspace-export failures. Cancelled tasks, newer runs, changed contracts, and explicit operator decisions can make those rows permanently ineligible. They still produce periodic database reads. What did you expect? Retire stale unsafe-export notices and recover eligible accepted results. Stop reading dormant history until a relevant committed change occurs. Keep a retry while a real obligation is blocked by ownership or a transient failure. Steps to reproduce Retain an unsafe-export terminal failure whose task is cancelled or superseded. Leave the instance idle after startup. The periodic reaper continues reading that history. Prerequisite #17680 is merged into master. Related: #14402 established safe export finalization; #14329 was an earlier historical recovery proposal. #17679 owns separate policy-review cleanup. This PR changes only historical unsafe-export scheduling and its producers. ## What Changed - Register a scoped worker through the existing coordinator and scheduler. Remove this duty from periodic reaping. Preserve the manual/startup recovery entry point. - Distinguish stale notices, eligible accepted results, dormant history, and concrete ownership contention. Reuse the existing mutation owner and lock order. Preserve explicit settlement vetoes and exact result/contract identity. - Signal relevant task, run, action, and deletion writes before they commit. Existing transaction boundaries handle nested commits and uncertain outcomes. Notifications contain only scope IDs. - Retain a retry only for owed work. Reconstruct work at startup, preserve drain/resume, and stop through the shared lifecycle. - Add concurrent, idempotent partial index migration 0410 for unsafe terminal failures. Keep the five newest generated schema snapshots. - Document producer coverage, query plans, supported writer boundaries, and test failures in the unsafe-export audit. ## Verification - Source `2a13dd08a6cc52f0adab09e3df9ce31e97b746b9` passes all 2188 cases across 24 complete files, without skips. The main selection passes 2129 cases in 192.58 seconds; safe-replacement passes 59 in 26.04 seconds. Coverage includes all 968 native-session cases, real export/action producers, explicit continuation, workspace reconstruction, interaction routing, Stop, queue and Slack consumers. The audit gives per-file counts. - Twenty separate fresh PostgreSQL 17 databases migrate through 0410 before setup. Four embedded-only fixture imports temporarily use their own external database on this IPC-exhausted host, then are restored byte for byte. Assertions and timing limits stay unchanged. This is qualified external-database acceptance, not an unmodified embedded CI run. - Database build, server typecheck/build, module boundaries and exact-head migration order pass. Normal integration preserves the complete original runtime/schema patch and unrelated upstream blobs. Original concurrent index SQL, all prior executable history, journal entries and retained snapshot bytes are unchanged; five snapshots 0406 through 0410 remain. Added comment removal preserves the full non-comment TypeScript token streams. - A populated 0409-to0410 upgrade preserves all 408 prior migration receipts and 38 companies. It appends exactly one receipt; replay adds none. The index is valid and ready on fresh and upgraded databases. - The owning audit retains earlier fixture failures, skipped checks and notice-retirement regression history. Older combined stack checks retain their original scope in their owning audits. Actual parent `73d24aa5acfcf17b3f676b4da7cd05eb70b60b99` is reconciled through a normal merge. Its tree equals the reviewed ancestor and the complete accepted child tree is unchanged. Fresh published-head CI and Greptile 5/5 remain required. No deployed sleep, fleet-cost or live provider qualification claim is made. - Inherited prefix correction: current integration `8f43c9f81fac23b50997e7f0e1d0d9cf383a8109` changes only two values in a previously unselected corpus fixture. All production code, the complete package tree and all 24 accepted test files remain byte-identical to the 2188-case source above. The additional complete 72-case corpus passes in 14.00 seconds and again on the same database in 13.08 seconds. Retained PSC/OUT and sentinel rows remain unchanged. The repeat is not double-counted. The parent audit retains the original collision and rejected cleanup attempt. - Latest parent context: integration `4d51231abe8b68c21ce896d0d2ac16865978c8ab` carries only the parent's one-argument GitHub observation correction and an independent master cleanup assertion. All production code, packages, 24 accepted suite files and the additional corpus are unchanged. The two focused native-presentation cases pass in 15.14 seconds and the complete cleanup-removal suite passes all six cases in 8.31 seconds on two fresh 0410 PostgreSQL fixtures. This does not claim the full parent workflow was rerun here. Current head `b28399babac72ba9db1c4a4ef882c5e87aded38c` has passing CI and Greptile 5/5 with no actionable findings. The first CI attempt lost runners: fourteen jobs explicitly received simultaneous shutdown signals, two reported lost runner communication, and two aggregate gates failed downstream. One failed-job retry on unchanged source passes. The underlying host shutdown cause remains unconfirmed; no code fix or extra retry is claimed. [CI run and attempts](https://github.com/paperclipai/paperclip/actions/runs/40819408528). No Ponytail verdict is present. ## Risks - A missing future producer can delay dormant-history discovery until restart. The audit names current producers. Independent SQL writers and other server processes remain outside the process-local signal contract. - Physical ownership and uncertain operations retain retries. Time alone does not authorize taking workspace ownership. No provider turn or unsafe archive retry is added. - The recovery owner remains authoritative if state changes after discovery. Terminal UI status does not authorize resource destruction or accepted-result replay. - The partial index adds matching-row write/storage cost. It builds concurrently through the existing restart-safe migration runner. - This proves the changed worker becomes quiet. It does not prove host suspension, external wake coverage, or fleet cost savings. Other sleep migrations remain. This slice still requires fresh current-head CI and reviews. ## Model Used OpenAI Codex, based on GPT-6, with reasoning and code-execution tools. The exact serving model ID and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-29 00:13:22 -05:00
DottaandPaperclip	51c3f8924c	fix(server): schedule cancelled workspace preservation (#17677 ) ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - A cancelled native run may still owe preservation of prepared workspace files. > - The existing recovery receipt and source lease record that obligation. > - The orphan reaper still searches for these cancellations on every pass. > - This PR registers committed cancellations with the shared deadline worker. > - The existing retention owner keeps file pinning and ownership checks. > - Idle and completed history no longer causes this preservation scan. ## Linked Issues or Issue Description Refs #17674 and #17145. Stopped instruction collection is merged into master. It owns file-preservation discovery only. The existing environment cleanup worker continues to own stop-only teardown. What needs to be improved? `preserveCancelledNativeWorkspaces` runs from every orphan-reaper pass. It queries even when no cancelled native workspace needs a file-recovery hold. Current foreground Stop can also defer retention after a lock or database failure, so startup-only recovery would be insufficient. Why is this improvement important? Empty queries keep idle tenants active. Removing them must not lose user files, weaken Stop ownership, replay cancelled work, or turn a retained allocation into destructive cleanup. Proposed solution Register the existing durable obligation from committed run-status, cancellation-acknowledgement and workspace-reference writes. Reconstruct it at startup. Keep retries while actual preservation remains unresolved. Disarm after the existing owner records the hold. Related-PR search and ROADMAP.md review found no duplicate of this scheduling migration. ## What Changed - Add a company/run-scoped preservation worker with 100-row keyset reconstruction and fair batches of five. - Separate pending file debt from immediate coordinator/lease readiness. Retain a 30-second retry for known unfinished preservation and shared failure backoff for errors. - Signal the existing status, acknowledgement, workspace-reference, deletion and settings transactions. Add no table or independent timer. - Keep exact source checks, no-workspace contracts, task/coordinator/run lock order, retention receipt and no-replay recovery card with their owners. - Recheck cancellation acknowledgement, run status and coordinator phase under the retention locks. Preserve the existing foreground preterminal API. - Keep startup/manual recovery; skip only this duty in periodic reaping. Preserve drain/standby and shutdown behavior. - Add concurrent, replay-safe partial index migration 0409 and retain the five newest snapshots. - Add the producer and lifecycle audit in `doc/plans/2026-10-25-cancelled-workspace-preservation-sleep-audit.md`. ## Verification - Current source `21b46a8e4293ca670235117458b984493a181759`: all 1472 cases in 16 complete files pass without skips. The owner passes 84 cases in 14.93 seconds. Fifteen consumer files pass 1388 cases in 133.46 seconds, including all 968 native-session cases and Stop, dispatch, restart, workspace-sync and upgrade-readiness coverage. - Twelve separate fresh PostgreSQL 17 databases migrated through 0409 before setup. The embedded-only lifecycle fixture temporarily used its own external database on this IPC-exhausted host and was restored byte for byte. Assertions and timing limits stayed unchanged. This qualifies external-database behavior; it does not claim an unmodified embedded CI run. - Database build, server typecheck/build, module boundaries and exact-head migration order pass. The complete original runtime/schema patch and unrelated current-parent blobs are preserved. Original concurrent index SQL, all earlier executable history and retained snapshot bytes are unchanged; five snapshots 0405 through 0409 remain. - A populated 0408-to0409 upgrade preserves all 407 prior receipts and 38 companies. Exactly one receipt is appended; replay adds none. The preservation index is valid and ready on fresh and upgraded databases. - Actual parent `82529741418e138d9d623bf13d2fa22c1ff79d36` is merged through a normal ancestry reconciliation. Its complete tree equals the reviewed parent. The entire accepted child tree and all source hashes are preserved. The audit retains earlier failures, qualifications and per-file counts. Published head `b34f0589847f33754ecde9413fd36bf007353d2c` has Greptile 5/5 and all 57 checks passing or skipped. No Ponytail review is present. These checks do not establish deployed host/database suspension or Cloud alarm delivery. ## Risks - Signals cover instrumented single-process writers. Independent SQL writers and additional replicas need integration. - Status signals may inspect a run without relevant file debt once. They do not create recurring work. Discovery and memory still scale with actual candidates. - Missing ownership or stop evidence remains pending. Active retries are intentional while a concrete file obligation is unresolved. - Retry timing is process-local; startup reconstructs durable debt. The worker does not overwrite another native-finalizer deadline. - Admitted database operations may finish after drain begins. Shutdown joins them. Provider teardown remains with the existing cleanup owner. - The partial index adds storage and write cost. Its concurrent migration uses the existing interrupted-index repair path. - Cloud alarm coverage, sleep eligibility and host suspension are unchanged. This proves worker behavior, not fleet savings. ## Model Used OpenAI Codex, GPT-6 family, with reasoning, shell tools, and PostgreSQL tests. The runtime does not expose a more precise model ID or context-window size for this turn. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-28 22:27:11 -05:00
DottaandPaperclip	8252974141	fix(server): schedule stopped instruction collection (#17674 ) ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Runs can stop while their private instruction edits still need collection. > - Existing copy rows and stop evidence describe that unfinished work. > - The orphan reaper still queries for it on every maintenance pass. > - This PR activates collection from committed copy and run transitions. > - It uses saved retry deadlines when stop proof or collection remains pending. > - Active copies and completed history no longer cause collection polling. ## Linked Issues or Issue Description Refs #17671 and #17670. Both prerequisites are merged into master. Captured saves and post-save release remain separate reasons with their own workers. What needs to be improved? `recoverStopped` queries instruction copies on every orphan-reaper pass, even when no terminal run owes collection. A run can become terminal without changing its copy row, so copy-only notifications would miss real work. Why is this improvement important? Repeated empty queries prevent idle tenant instances from becoming quiet. Removing them must preserve edits, stop proof, current ownership, and recovery after restart. Proposed solution Use the existing transaction signals, scoped deadline worker, and scheduler. Reconstruct eligible copies at startup, signal supported copy and terminal-run writers, and retain saved retry deadlines for unresolved work. Preserve the existing collection and directory owners. Related PR search found the warm agent-file ownership work (#14695), verified stop boundary (#14311), and task-workspace cleanup (#16464). This PR does not replace those contracts. ROADMAP.md has no duplicate migration. ## What Changed - Add scoped stopped-instruction collection with keyset reconstruction and fair batches of 20. - Signal before copy preparation, mutation and adoption writes, and before terminal run writes in their existing transactions. - Cover heartbeat, native finalization/restart/session recovery, execution-control, queue and dispatch producers. - Signal settings changes and company/agent deletion. Preserve drain, standby, restart and shutdown ownership. - Recheck terminal-run eligibility in the due-time claim. Keep terminal status separate from process-stop proof. - Retain existing stop checks, attempt limits, saved candidate bytes and remote-resource fencing. - Skip only this lane in periodic orphan recovery. Preserve manual/startup recovery. - Add concurrent, replay-safe partial index 0408 and retain the five newest snapshots. Add no table. - Record the owner and producer audit in `doc/plans/2026-10-25-stopped-instruction-collection-sleep-audit.md`. ## Verification - Source `cb2818a8f46ef961f744977a258f0e9042e31a42`: all 1469 cases across 14 complete files pass without skips in 141.69 seconds. This includes all 968 native-session cases, filesystem saves, startup, terminal-run producers, dispatch, queue, execution-control, finalization and lifecycle. - Eleven separate fresh PostgreSQL 17 databases migrated through 0408. The embedded-only lifecycle fixture temporarily used its own external database on this IPC-exhausted host and was restored byte for byte. Assertions and timing limits stayed unchanged. This qualifies external-database behavior; it does not claim an unmodified embedded CI run. - Database build, server typecheck/build, module boundaries and exact-current migration order pass. The original concurrent index SQL is unchanged. All prior executable migration history, journal entries and retained snapshot bytes are preserved; the five newest snapshots are 0404 through 0408. - A populated 0407-to0408 upgrade preserves all 406 prior migration receipts and 38 companies. It appends exactly one receipt. Replay adds none. The collection index is valid and ready on fresh and upgraded databases. - The normal merge of actual parent `267842fc3c6e6542deed8a1bcc2c78bec8df7862` preserves both complete patches, all independent sidebar changes from #18117, and the full accepted server/package/test trees. The complete sidebar test file passes all 36 cases on the combined tree. React act warnings remain. - Prior failures and fixture qualifications remain in the audit. Published head `d176d731f083c7edd2ede688cb901d1e66d8f1d8` has Greptile 5/5, all 57 checks passing or skipped, and no unresolved review threads. No Ponytail review is present. These local tests do not establish deployed host/database suspension or Cloud alarm delivery. ## Risks - Process-local signals cover instrumented writers. Independent SQL writers and additional replicas still need integration. - Terminal-run signals can cause one scoped inspection even if no instruction copy exists. They do not create a recurring scan. - Reconstruction and memory scale with actual pending candidates; active candidates are filtered by the run join. - Admitted file/provider operations can outlive a later drain request. Shutdown joins them. Uncertain ownership remains pending rather than being discarded. - The partial index adds storage and write cost. Its concurrent migration uses the existing interrupted-index repair path. - Cloud alarms, sleep eligibility and provider suspension are unchanged. Worker quiet is not a claim of deployed host/database sleep or measured savings. ## Model Used OpenAI Codex, GPT-6 family, with reasoning, shell tools, and PostgreSQL/filesystem tests. The runtime does not expose a more precise model ID or context-window size for this turn. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-28 22:13:57 -05:00
DottaandPaperclip	267842fc3c	fix(server): schedule owed agent directory cleanup (#17671 ) ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Agent runs can save their directory before temporary-file cleanup finishes. > - The existing receipt records stop proof and unfinished cleanup. > - The orphan reaper still searches for this debt on every maintenance pass. > - This PR activates cleanup from committed changes and saved retry deadlines. > - The directory owner keeps its resource checks and file lock. > - Settled directory history no longer causes recurring cleanup queries. ## Linked Issues or Issue Description Refs #17670, the merged captured-instruction commit slice. This PR targets master. It does not include stopped instruction collection or change the saved-file contract from #14695. What needs to be improved? The post-save part of `recoverCaptured` queries directory copies on each orphan-reaper pass, even after all temporary directories have been released. Why is this improvement important? Empty database work prevents idle tenant instances from becoming quiet. Cleanup must still survive a crash after a save and preserve files when stop or resource ownership is uncertain. Proposed solution Use existing copy receipts as the source of truth. Notify the shared coordinator inside relevant copy-write transactions. Reconstruct pending work at startup and register each saved retry deadline. Keep physical cleanup in the directory owner. Add a partial index over unfinished cleanup rather than a new queue table. Related-PR search found workspace archive and SSH task-workspace cleanup changes (#17175 and #16464). They own different resources and do not replace this stopped agent-directory receipt recovery. ROADMAP.md has no duplicate migration. ## What Changed - Add a scoped directory cleanup worker with keyset discovery and batches of 20. - Signal relevant copy transitions, company/agent deletion, and worktree execution policy changes. - Preserve the due-time claim, current receipt read, directory lock, stop proof, and exact remote-resource checks. - Read the receipt after release; a returned promise does not establish cleanup completion. - Keep unresolved cleanup on its saved retry or shared failure backoff. Final receipts disarm the worker. - Register the worker during startup and skip only this lane in periodic recovery. Keep manual recovery compatible. - Add concurrent, replay-safe partial index migration `0407_greedy_star_brand.sql`. Retain the five newest schema snapshots. - Add the producer audit and lifecycle evidence in `doc/plans/2026-10-25-directory-cleanup-sleep-audit.md`. ## Verification Published head: `210fcb1215a3b5e5ed84e420ddb73ab5952d9365`. Source acceptance: `70a6800eea874bdb87685bf6eea66de79c48b577`. Parent #17670 landed as `b294de546bf9cd3a8578a7a66d7e8ec0eb939799`; normal squash-ancestry reconciliation preserves the entire accepted descendant tree. Final follow-ups change audits only. - All 284 cases in six complete filesystem, startup and heartbeat owner files pass, without skips, in 48.88 seconds. Four unused fresh PostgreSQL 17 databases migrated through 0407 isolate destructive fixtures. - Three fixtures use supported external database paths. The embedded-only lifecycle fixture temporarily uses its own external database on this IPC-exhausted host, then is restored byte for byte. All assertions and original timing limits remain unchanged. This qualifies the local result; CI must still pass with the original embedded fixture. - Actual database build, server typecheck/build, module boundaries and exact-current migration order pass. The original concurrent idempotent index SQL bytes are unchanged. All prior executable migration history, journal entries and retained snapshots stay intact. The five snapshots are 0403 through 0407. - Populated 0406-to0407 upgrade preserves all 405 old receipts and all 38 companies, adds exactly one receipt and adds none on replay. The cleanup index is valid and ready on fresh and upgraded databases. The entire current database tree equals the source used for this proof. - Both complete original and upstream patches are preserved. The actual parent squash tree equals the already-adopted reviewed parent; resolving eleven duplicate-ancestry text conflicts leaves the whole accepted tree unchanged, not just selected files. Complete server, package, UI and test trees still match the 284-case source acceptance. - The audit retains earlier ownership, stopped-resource, receipt, fixture and local-runner failures. The no-projects build filter was not counted as a build pass; corrected actual build and complete reruns passed before publication. Old draft review scores do not count for this new head. - Current-head Greptile gives 5/5 with no actionable findings, and all 57 checks pass. These checks establish worker behavior, not deployed host/database suspension or measured savings. ## Risks - Signals cover the existing single-process writer model. Independent SQL writers and replicas need separate integration. - The worker retains identifiers for actual pending work. Its index excludes completed history but does not make large pending backlogs free. - File/provider cleanup can outlive an admission change once started. Shutdown joins admitted operations. Unknown remote ownership remains pending and no replacement environment is acquired for cleanup. - The partial index adds storage and write cost. Its concurrent migration uses the existing interrupted-index repair path. - Cloud alarm coverage and host-sleep safety remain unchanged. This establishes worker quiet, not deployed host/database suspension or measured savings. ## Model Used OpenAI Codex, GPT-6 family, with reasoning, shell tools, and PostgreSQL/filesystem tests. The runtime does not expose a more precise model ID or context-window size for this turn. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-28 21:51:47 -05:00
DottaandPaperclip	27270e9bf8	fix(server): wake interrupted retry cancellation from committed intent (#17667 ) ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - A parked scheduled retry has no executor to finish an interrupted Stop request. > - Its saved cancellation fence already records the work that remains. > - The orphan reaper currently scans for that work on every heartbeat, including idle periods. > - This PR registers the existing records with the shared delivery scheduler and wakes recovery after committed writes. > - Recovery keeps the existing cancellation guards and settlement behavior, then becomes quiet. ## Linked Issues or Issue Description Refs #17666, the merged preceding PR in the recurring-server-work migration stack. This PR targets master. Related cancellation work found in the dedup search: #12301 and #7340. This PR changes the trigger for interrupted parked-retry cancellation; it does not replace their cancellation or retry policies. What happened? The periodic orphan reaper queries scheduled retries with cancellation fences even when no cancellation needs recovery. Its first-20-row scan can also stop behind malformed evidence. Expected behavior Committed cancellation intent wakes bounded recovery. Failed work retains a retry. Startup reconstructs durable work. Empty or settled work performs no recurring SQL for this duty. Steps to reproduce 1. Start a server with heartbeat scheduling enabled and no interrupted retry cancellations. 2. Observe the orphan reaper repeatedly query for cancellation fences. 3. Cancel a scheduled retry and fail the final status write after its fence commits. Recovery must complete the existing Stop request without running a provider or dropping its metadata. Paperclip version or commit Current parent squash `7afee8f0622e273d10506b0febfb68f143d168b1`. Source acceptance `66107ae0a7ad85fd0476f91c4f8f98ae74a7a048`. Deployment mode Self-hosted server with the existing single-process transaction signal model. Local evidence uses PostgreSQL 17. ## What Changed - Add one domain-owned recovery worker over existing heartbeat run rows. No new table. It delegates to run control and preserves original cancellation, budget, and operator metadata. - Signal cancellation fences, lifecycle transitions, dispatch deferral/promotion/suppression, relevant settings changes, and deletion within their owning transactions. Wrap only the ordinary database fence in a short transaction; provider calls stay outside it. - Keep startup/manual recovery compatible and remove this duty from the periodic orphan sweep. Other reaper duties remain for separate PRs. - Extend the shared scoped worker to retain pending work with a memory-only admission retry while its owner is paused. Without pending work, it schedules nothing. Existing GitHub consumers retain their behavior. - Add a concurrent idempotent partial index and lifecycle/producer tests. Enable guarded disposable PostgreSQL URLs in affected test harnesses. - Reconstruct one hundred candidates per scope per scheduler pass. Resume from the saved scope cursor and retain fair twenty-item execution batches. Manual recovery starts cancellation before reading the full backlog. - Require the recovered browser reply to be saved before testing reload. Keep all original assertions and time limits. - Record the full producer audit, lifecycle limits, and failed attempts in `doc/plans/2026-10-25-scheduled-retry-cancellation-sleep-audit.md`. ## Verification Published head: `405e533394b26215e22d0452e9b0207d3f784a79`. Source acceptance: `a35fa43b98e2bd378d4a920d2775ce243654838b`. The final commit changes the audit only. - All 363 backend cases in ten complete owner and consumer files pass without skips. This includes actual Stop/retry producers, transaction settlement, interrupted-write recovery, pause/resume, shutdown, fair backlog processing and quiet after settlement. Seven separate fresh PostgreSQL 17 databases prevent fixture interference. - The two embedded-only backend fixtures temporarily use separate external databases on this IPC-exhausted host. Their fixture imports and native client teardown are restored byte for byte afterward. Assertions and timing limits are unchanged. CI must still pass with the original embedded fixtures. - Two paging regressions fail on the prior worker and pass on the fix. They cover cancellation before full reconstruction, a malformed first page, fair batches, a newly committed intent behind the cursor, and no later idle SQL. Per-candidate admission reads remain deliberate safety checks. - The repeated CI reload failure is reproduced with a temporary twelve-second fixture settlement delay. The trace retains the same five-second missing-reply assertion, even though a cleanup race masked it in the top-level error. Requiring exactly one saved reply from the resumed run passes under the identical delay. The fault is removed. All six browser journeys pass on the final source in 40.5 seconds, with zero retries and the original 120-second case and five-second reload limits. - Browser acceptance uses the canonical CLI/server/static-UI path and a fresh external database. Only fixture database-URI setup is temporarily adapted and then restored. This is not an unmodified embedded CI-environment reproduction. The six cases include the controlled case; repeated runs are not added to the distinct count. - Actual database build, server typecheck/build, module boundaries and exact-current migration order pass. The database source tree is unchanged from the verified 0405-to0406 upgrade: all 404 prior receipts and 300 companies stay intact, exactly one receipt is added, replay adds none, and the index is valid on upgraded and fresh databases. The five snapshots remain 0402 through 0406. - All earlier failures remain recorded in the audit. Prior head `48b3fcb83f305616df02a4337a42ec0867bb4b80` had exact-head Greptile 5/5 but failed the repeated browser assertion. It was not retried blindly. Its completed Ponytail review's backlog concern and old migration paragraph are addressed here. Old scores do not satisfy new-head gates. - Current-head CI passes. Exact-head Greptile and Ponytail both give 5/5, with no remaining actionable findings. These checks do not prove deployed instance or database suspension. ## Risks - Only supported in-process writers produce local transaction signals. Independent SQL writers or other replicas need a separate ingress contract. Startup reconstructs saved obligations. - A real failure retains bounded retries. Unknown commit outcomes retain the shared intent hold. Neither is discarded to report quiet. - Per-owner drain uses a memory-only admission recheck. The shared helper change affects existing consumers, which have focused regression coverage. - The partial index is concurrent and idempotent; it adds index storage. Each scoped load reads at most one hundred rows. The shared helper retains discovered pending IDs between passes, so a large unresolved backlog still uses memory. - Cloud alarms, idle-safety exemptions, and other reaper duties remain separate. Merge requires passing current-head CI and review gates. ## Model Used OpenAI Codex, GPT-6 family, with reasoning, shell tools, and local PostgreSQL tests. The runtime does not expose a more precise model identifier or context-window size for this turn. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-28 21:07:55 -05:00
scotttongandPaperclip	71f0c0c99e	feat: add opt-in Coordinator workspace for chat, tasks, and decisions (#17983 ) <!-- entire-trail-link-start --> https://entire.com/gh/paperclipai/-/trails/147/changes/paperclip/147 <!-- entire-trail-link-end --> ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - People coordinate work through conversations, tasks, and requests for input. > - These surfaces must share task state and preserve the context of each decision. > - The existing workspace makes people switch surfaces to follow that context. > - This pull request adds an optional Coordinator workspace with linked conversations, tasks, documents, and decisions. > - Each person can enable it in Settings > Experimental and return to the classic workspace. > - The benefit is a coherent path from a request to an assigned task and reviewed work. ## Linked Issues or Issue Description Subsystem affected UI, server, shared contracts, and database. Problem or motivation People need a consistent way to start tasks from agent conversations, answer questions, review work, and return to the source context. Decisions and task state must agree across these surfaces. Proposed solution Add a personal, default-off workspace experiment. Keep one conversation per agent. Add task proposals, compact task and decision cards, contextual document panels, and a Needs You queue with search, filters, sorting, grouping, and history. Alternatives considered Replacing the classic workspace for everyone would remove the opt-out path. Keeping separate decision state in each surface would create conflicting answers. This change uses the existing canonical task and interaction records instead. Roadmap alignment This supports the existing agent chat, task management, and human review capabilities. It is an experimental presentation choice. The user requested this isolated implementation after design review. No Discord discussion is claimed. ## What Changed - Add per-person workspace preferences, a default-off setting, and an additive migration. - Add Coordinator navigation, pinned destinations, task lists, agent switching, and contextual panels. - Link task suggestions and creation to the source conversation. Default new task ownership to the current agent unless the user specifies another owner. - Share pending questions, decision receipts, exact review targets, and history across tasks, chat, and Needs You. - Preserve task access, assignment authorization, revision binding, and required output review gates. - Add compact document links, relative timestamps, composer controls, and reduced-motion support for task and decision transitions. - Add component stories, regression coverage, and capability-map documentation. ## Verification - Final head: `4b839aae1e314bd7e8635a766f1d205ff1c03ba6`, based on master `8bc051245f77a47bee0f8ba45896b8bfa5922e0a`. Verified October 29, 2026 at 00:10 UTC: MERGEABLE, 56 checks passed, four conditional skips, no pending or failed checks. [Current CI run](https://github.com/paperclipai/paperclip/actions/runs/40790639688) passed without a rerun on this head. - Fresh Greptile 5/5, zero new comments and zero open review threads; Superagent passed with no suspicious changes. [Checks](https://github.com/paperclipai/paperclip/pull/17983/checks). - Local workspace typecheck/build passed after the latest rebase. The final account-read patch passed UI typecheck/build and all 12 related preference/settings tests, including a delayed real-client request across account changes. Earlier scoped checks cover review deduplication/replay, decision deep links, cross-surface state, access boundaries, and migration replay. - Local database/browser rechecks after the latest rebase were limited by exhausted macOS shared-memory IDs: `initdb` failed before database creation. The local run passed 31 UI/snapshot tests and skipped 24 database tests; those skips and the blocked local browser start are not claimed as passes. The independent Linux CI database and browser checks passed. No running dev database or host setting was changed. - Upstream migration 0403 is preserved. Preferences and durable review retry aliases are generated as replay-safe migrations `0404_tense_silver_sable.sql` and `0405_harsh_avengers.sql`; five newest snapshots are retained. Every detected conflict was rebased and pushed before waiting for CI/review, as requested. - The PR is unmerged. The active master ruleset still requires code-owner approval for the changed Paperclip skill; no approval or rule change was performed. <details> <summary>Earlier verification failures, integration history, and evidence</summary> These entries preserve prior checkpoints and failures; the current acceptance result is above. - Focused UI and server checks from the isolated build are recorded in the implementation plan. - Browser checks covered the opt-in shell, navigation, task/document links, and decision card states. No new live provider trial is claimed for this handoff. - Current acceptance head: `4b839aae1e314bd7e8635a766f1d205ff1c03ba6`, rebased onto master `8bc051245` immediately after its GitHub review-repair migration took 0403. Preferences are generated as idempotent `0404_tense_silver_sable.sql`, preserving upstream SQL/journal/snapshot history and five newest snapshots. GitHub reports MERGEABLE after the immediate lease-protected push. Scott's updated instruction is to rebase and push every conflict resolution first, without waiting for CI or Greptile; verification follows the push. - The final reviewed feature tree was consolidated for repeatable single-commit rebases. The complete previous commit history remains reachable through local recovery ref `codex/coordinator-recovery-before-rebase-20261028` (resolved snapshot `0e1bbdf4e`). The actual rebase completed, and its tree hash exactly matches that resolved snapshot. The force-with-lease required the known remote head `0e6ef7c44`, protecting against concurrent branch changes. No PR merge or permission/runner setting change occurred. Fresh CI/review are in progress for the current head. - `2001132fa` received Greptile 5/5 with one nonblocking account-switch read finding. Current head detaches path-coalesced preference GETs and disables HTTP caching, retaining React Query's account-scoped sharing. A delayed real-client GET regression proves account B can load its saved choice before account A responds, and A's late response only updates A's cache. Preference/settings tests 12/12 and UI typecheck passed; its review thread is resolved. Fresh current-head CI/reviews are pending. The prior CI chat shard 3 ended with “The operation was canceled” and no assertion failure ([job 123171595631](https://github.com/paperclipai/paperclip/actions/runs/40789688333/job/123171595631), `/tmp/pr17983-2001132-chat3.log`); no code/timeout change is attributed to that cancellation. - `843e823b4` reached fresh Greptile 5/5 with zero comments/open threads and Superagent pass. All browser tests including the repaired YAML shard passed, and 54 checks passed. General server shard 9 ended with “The operation was canceled” and no failed assertion; its test step was marked cancelled (job [123164350893](https://github.com/paperclipai/paperclip/actions/runs/40787501761/job/123164350893), log `/tmp/pr17983-843e-server9.log`). A single unchanged-head rerun was started after the workflow completed, but master moved while it ran. A local nested-clone check timed out in its 30-second database-startup hook and then failed cleanup before the 20 database cases ran; this is retained as a local verification limit (`/tmp/pr17983-843e-nested-clone-check.log`), not claimed as a pass or proof of the CI cancellation cause. - Following Scott's instruction, the new conflict was rebased and pushed immediately without waiting for that rerun. Upstream's `0403_natural_cerise.sql` is preserved; regenerated preferences and retry-alias migrations are `0404_tense_silver_sable.sql` and `0405_harsh_avengers.sql`, replay-safe with five newest snapshots retained. The YAML helper conflict combines upstream's click and header behavior with the editor-selection guard and injected regression. Recovery ref `codex/coordinator-recovery-843e823b4` preserves pre-rebase work. Current head is MERGEABLE. Full workspace typecheck/build passed; UI and snapshot checks passed 31 tests, but 24 database tests were skipped by the local support probe, and the local browser server could not initialize PostgreSQL. A direct disposable `initdb` diagnostic established the host limitation: `could not create shared memory segment: No space left on device` (`shmget`, shared-memory IDs exhausted, not disk space). No dev database or host setting was changed. Diagnostics: `/tmp/pr17983-2001132-initdb-probe.log`, `/tmp/pr17983-2001132-db-probe.log`; checks: `/tmp/pr17983-2001132-tests.log`, `/tmp/pr17983-2001132-browser.log`, `/tmp/pr17983-2001132-types.log`, `/tmp/pr17983-2001132-build.log`. These local skipped/blocked checks are not claimed as passes; fresh CI on independent runners is in progress. - `d18f683cd` reached fresh Greptile 5/5 with zero comments/open threads and Superagent pass, but [E2E shard 7](https://github.com/paperclipai/paperclip/actions/runs/40785966243/job/123159719925) failed parsing an Advanced YAML clipboard read beginning with “Skip to Main Content.” The log is retained at `/tmp/pr17983-d18f-e2e7.log`. Current head hardens the test helper to verify editor focus and selection, clear stale clipboard content, and require the YAML header at the start of a fresh copy before parsing. Saved-state assertions and timeouts are unchanged. All six Advanced YAML browser journeys passed on a disposable local instance (41.0s); the exact lost-response journey also passed with a one-time injected surrounding-page copy, verifying rejection/reacquisition (17.6s). The precise browser focus/clipboard timing in CI remains unproven; the observed invalid-read path is now guarded and deterministically exercised. Logs: `/tmp/pr17983-yaml-clipboard-scope-browser.log`, `/tmp/pr17983-yaml-clipboard-injected-browser.log`. Fresh current-head CI and reviews are pending. - `19e6dcb0b` passed Superagent and Greptile 5/5, with one nonblocking deep-link finding. Current head preserves attention links using `?decisionId=`: the requested pending decision is rendered even beyond the first 40 cards, focused and scrolled into view, then only that parameter is consumed so later refreshes do not refocus. Other URL parameters remain. Needs You tests 10/10 and UI typecheck passed; its review thread is resolved. The preceding post-rebase regression run passed 45/45 tests. Fresh current-head CI/reviews are pending. - `6d772b7cc` reached Greptile 5/5 with zero comments/open threads and Superagent pass. While 32 checks had passed, master moved and caused a documentation conflict in `maps/feature-map/onboarding.md`. Rebased immediately, preserving both onboarding paragraphs. The complete four-commit branch was pushed as `19e6dcb0b` before waiting on CI/review, per Scott's instruction. A transient Git index lock interrupted the first continue; the command sequence briefly pushed intermediate `34e298c07`, then the completed rebase was immediately pushed. All feature and security/retry fixes are present; local recovery ref `codex/coordinator-recovery-6d772b7cc` preserves the pre-rebase history. The only tree differences from that ref are upstream's two smoke-test files and the combined documentation paragraph. GitHub reports MERGEABLE. Fresh current-head verification is in progress; prior-head review results are not current acceptance. - `21efa3120` passed Superagent but Greptile scored 4/5 for a valid retry-key persistence bug: an acknowledged duplicate key could reopen a resolved review. Current head adds an additive, replay-safe `0404_light_swarm.sql` migration for indexed, task-scoped aliases from acknowledged retry keys to the canonical interaction. Alias registration and retry lookup occur under the existing task lock; payload/actor mismatch still conflicts, and each canonical review permits at most 100 aliases. Original and acknowledged keys replay the terminal result rather than creating a new gate. Five newest migration snapshots are retained. Service/routes tests 165/165 passed; final quality review plus migration replay/snapshot checks 25/25 passed; server typecheck passed. The P1 thread is resolved in code; fresh current-head reviews and CI are pending. - `69c2c7543` passed 55 checks and Greptile 5/5 with no open Greptile findings, but Superagent check [123140675812](https://github.com/paperclipai/paperclip/pull/17983/checks?check_run_id=123140675812) correctly flagged unbounded pending quality-card creation. Current head fixes that under the existing task-row lock: equivalent requests with fresh idempotency keys reuse the pending card; conflicting requests for an unresolved deliverable return the existing interaction ID; pending cards are capped at ten per task across all reviewers. Distinct outputs remain independent, and already-answered items in a partially pending batch can receive a fresh review. Added real-database concurrency, cross-card duplicate, partial-answer, and hard-cap regressions. Quality review 22/22 tests and final server typecheck passed; earlier service/routes 163/163 tests passed before the final partial-answer refinement. One added assertion initially expected a service HTTP error, but duplicate keys are rejected earlier by the existing shared schema; the assertion now verifies that validation. Fresh current-head CI/reviews are pending; the action-required security result is not treated as passed. - `c9c575e5f` completed all 56 checks successfully with four conditional skips, Greptile 5/5, and Superagent pass. Its two P2 review findings are fixed in the current head: independently bound quality approvals now each remain visible in attention; changing/clearing URL-backed assignee/status filters updates the URL and survives task navigation. Both review threads are resolved. Regression evidence: attention service 34/34 tests passed, CoordinatorTasks 20/20 passed, UI and server typechecks and the full workspace build passed on `69c2c7543`. The first new UI test run caught an assertion racing React Router's transition; waiting for the navigation before asserting passes without weakening the navigation/remount checks. These older-head green checks are not claimed for the new fix commit. - Preceding `0e6ef7c44` completed all 56 checks successfully with four conditional skips, fresh Greptile 5/5 and no open findings, and passed Superagent. A fifth migration-metadata collision arrived before the final Runner job finished. Those green results are preserved as prior-head evidence, not current acceptance. - Previous fully verified migration head: `0e6ef7c44696a377f35e69521b93587576374bd0`, integrating master `f8226b051` after the fourth migration-number collision. Master added terminal GitHub-response migration 0401 while the final native check ran; upstream 0401 SQL/journal/snapshot is preserved unchanged, and preferences are generated as idempotent `0402_yielding_blink.sql` on top. Exactly the five newest snapshots remain. GitHub reports MERGEABLE after the push. All 1,155 relevant migration/review/interaction/native-execution/remote-assets tests, workspace typecheck/build, migration guards and whitespace checks pass. Fresh exact-head CI/Greptile/Superagent are pending. - Immediately preceding head `36c67cf03` completed all 56 checks successfully with four conditional skips, fresh Greptile 5/5 and no open findings, plus passed Superagent security. No retry was needed for that head's CI. Master advanced and introduced only a migration-metadata conflict while its final native check ran, so that green result does not establish acceptance of the current integration. Four consecutive collisions (0398, 0399, 0400, 0401) during verification are retained as concrete integration churn; a brief pause of competing migration merges was requested, without assuming it happened or changing any repo setting. The PR has not been merged. - Prior fully verified head: `36c67cf03`, on the clean `30059c0ed` integration of master `efd65c112`. The last Greptile P2 is fixed: Needs attention retains the participant-agent scope through authoritative server membership queries for each pending task, including historical participation when another agent currently owns the task. It does not approximate participation with current assignment or enumerate every company task. The actual view-switch regression and all 31 focused task/routing/collection tests, UI typecheck/build, token gates and whitespace checks pass. Greptile completed a fresh 5/5 review on this exact head (review 19) with zero new comments and no open review threads. CI and Superagent remain in progress; no current-head CI failure has been reported. - Head `30059c0ed` received Greptile 5/5 with that one nonblocking participant finding, now fixed. Superagent passed that head. Current-base integration restored the ephemeral RunsOn fleet after a superseded workflow retained queued aggregate jobs: normal cancellation was insufficient; the single force-cancel request was interrupted but readback confirmed that obsolete run cancelled and current CI began on the trusted fleet. No cancellation retry or runner/security/workflow changes were made. Its partial CI was superseded by the necessary participant fix and is not current acceptance. - Previous compatibility/base-sync head: `30059c0ededc0eab4e04e8299a884f36db8b292f`, integrating master `efd65c112` and the Inbox/workspace compatibility fixes. GitHub reports MERGEABLE after the push. Coordinator keeps Inbox standalone under More without rewriting the instance's Combined Inbox preference; opting out restores that preference. Saved merged-Inbox URLs resolve to their original owner, task status presets remain usable, and canonical repeated `workspace` parameters retain scoped, deduplicated pagination (including Needs attention). All 192 broader routing/Inbox/sidebar/privacy/review tests and the final 16 task-page tests pass, as do workspace typecheck/build, token gates and whitespace checks. The two review threads are resolved. Fresh exact-head CI, Greptile and Superagent results are pending. - The preceding `d5b9be5bd` remained mergeable but its CI routing gate intentionally fell back to GitHub-hosted runners: “stacked base merge commit does not contain the current base branch.” All 45 downstream jobs stayed queued. Current master was merged cleanly to refresh the pinned base; no runner/security settings or workflow logic were changed. Greptile scored that preceding head 4/5 with the two compatibility findings fixed here. Its automatic Superagent scan was inconclusive at checkout; the documented retry was still pending when superseded. Those results do not establish acceptance of this current head. - Previous approval/migration head: `d5b9be5bd3b8d6b0437e42bf48138377f34fa67d`, integrating master `ba5bba86d` and the stale-output approval correction. GitHub reports MERGEABLE after the push. The fresh P1 finding is fixed: every submitted item now validates and locks its bound output inside the resolution transaction, whether or not it carries a required-quality-review binding. Real database regressions verify that an advanced document revision or deleted attachment refuses the entire batch without recording approvals, and current ordinary output reviews still resolve. All 272 combined migration/review/interaction tests pass; workspace typecheck/build passed. Fresh exact-head Greptile and CI are pending. The automatic Superagent scan ended inconclusive at checkout; one documented on-demand retry is pending. These are explicit verification limits, not passed security results. The P1 thread is resolved. - Master consumed the next migration slot three times during this verification pass: confirmation recovery took 0398, continuation recovery took 0399, and GitHub acknowledgement recovery took 0400. Each upstream SQL/journal/snapshot is preserved unchanged. Preferences are now generated as idempotent `0401_white_lenny_balinger.sql` from upstream 0400; exactly five snapshots remain, and replay coverage locates this migration by table content. This is recorded concurrent integration churn, not a claim that older green results apply to the latest base. - Head `ed3b68da9` fixed the two history/URL findings with 26 focused regression tests, server/UI typechecks, workspace build and token gates passing. Greptile then scored that head 4/5 with the stale-output P1 corrected in the current head. Its partial CI is superseded, not counted as current acceptance. - Previous filter-fix head: `ed3b68da9`, based on the `8458d39d9` merge of master `063cfd438`. The two fresh Greptile findings are fixed: history outcome filters now match recorded per-item verdicts in SQL before pagination (mixed reviews remain in both applicable outcomes), and same-page URL assignee changes/back/forward navigation update that filter without clearing independent filters. All 26 focused database/navigation/collection tests, server/UI typechecks, workspace build, token gates and whitespace checks pass. The two review threads are resolved. Fresh exact-head CI, Greptile and Superagent results are pending. - The `8458d39d9` migration integration also passed all 328 targeted migration/interaction/confirmation tests, workspace typecheck/build and Superagent security scan. Greptile scored that head 4/5 with the two functional gaps fixed in the current head; those prior-head checks are not current acceptance. - Migration integration head: `8458d39d9721f4cb312c2390070a0609f8cddd1a`, integrating master `063cfd43813cabf18417605fb9eefb9aacf95c8d`. GitHub reports MERGEABLE after the push. Master advanced twice during this conflict-resolution pass: first its confirmation-recovery migration took 0398, then its continuation-recovery migration took 0399. Both upstream migrations and journal entries remain unchanged; Coordinator preferences are now generated as idempotent `0400_sad_guardian.sql` from upstream's latest snapshot. Exactly the five newest snapshots remain. The replay regression now locates the table migration by content instead of hardcoding a renumbered filename. - All 328 targeted question/review/confirmation/migration tests passed again after the second merge. Workspace typecheck/build and fresh exact-head CI/reviews are in progress. The preceding `0c46f46d6` passed workspace typecheck/build and Superagent security scan, but was superseded because master consumed migration 0399 while those checks ran. That prior-head result is not acceptance of the current head. No production settings or runner/security permissions were changed, and the PR has not been merged. - Previous integration head: `0c46f46d6f2b23417ab872ce3cb6ff2673647287`, integrating master `287b04d72f1b9fca1412e05435c75b8302ba0710`. GitHub reports MERGEABLE after the push. The renewed conflicts were `0398_snapshot.json`, `_journal.json`, and the top imports in `issue-thread-interactions.ts`. Upstream's `0398` confirmation-recovery index and journal history are preserved unchanged; Coordinator preferences were regenerated as idempotent `0399_bouncy_miek.sql`, with replay coverage updated and exactly the five newest snapshots retained. Both terminal confirmation notifications and Coordinator task assignment/required review behavior are preserved. - All 328 targeted interaction/review/confirmation/migration tests pass, as do workspace typecheck, map validation and whitespace checks. The workspace build and fresh exact-head CI/Greptile/Superagent checks are pending. The first migration-generation attempt hit the sandbox's local IPC restriction before generating files; the unchanged authorized local generation completed successfully. Prior-head green checks below do not establish acceptance of this merge. - Previous acceptance head: `8b7dcf739ed15afc51351fdfa0e0e5fbc75ab788`, with master `1aa3a21ac` integrated and GitHub reporting MERGEABLE. Greptile completed a fresh 5/5 review on this exact head with zero new actionable findings and no open review threads. The [fresh CI workflow](https://github.com/paperclipai/paperclip/actions/runs/40752864319) completed SUCCESS on attempt 2 at 19:40:08 UTC, including all eight E2E shards. Final completed check set: 55 succeeded, four conditional checks skipped, zero pending/queued/running checks, and one neutral/inconclusive Superagent scan. The auxiliary commitperclip review and isolated native Runner compilation/cache-reuse check both passed. This is not a claim that Superagent produced a passed security verdict. GitHub still reports MERGEABLE against current master `60b8089a44b4eaa37e627adbfdf2f130bda13335`. - Current-head E2E: all eight shards and the aggregate passed, including the previously failing YAML browser journey. Serialized server shard 9/9 failed: the protected YAML projection test exceeded its original 15-second timeout; its late update request then reached the next test's reset mock (the captured payload is the prior test's model/label update). All 88 tests in that exact unchanged file passed locally in 38.03 seconds, with no timeout or assertion changes. The original slow-request cause remains unproven. CI failure log: `/tmp/pr17983-8b7-serialized9.log`; local recovery: `/tmp/pr17983-adapter-yaml-repro.log`. The single bounded unchanged shard rerun passed, and the workflow completed SUCCESS. Rerun log: `/tmp/pr17983-8b7-serialized9-rerun.log`. The initial failure is retained; a passing retry does not establish its original slow-request cause. - Greptile scored preceding head `4873704be` 5/5 with one valid P2: opened task decision records missed company-scoped live invalidation. The current head uses the existing company decision prefix for resolution and effect-completion events, and resets private record payloads on access changes. Its thread is resolved. All 107 focused record/live-update tests, UI typecheck/build, token checks and whitespace checks pass. - CI on `4873704be` failed E2E shard 7/8 in the Advanced YAML lost-creation-response journey: its clipboard helper selected page text starting with “Skip to Main Content” instead of YAML. The exact unchanged journey passed in a disposable local browser instance (1 test, 17.1 seconds). No assertion, timeout or production behavior was weakened; the original failure cause remains unproven. Failure log: `/tmp/pr17983-487-e2e7.log`; local check: `/tmp/pr17983-agent-yaml-repro.log`. The full unchanged Advanced YAML browser suite also passed locally (6 tests, 37.8 seconds). Fresh current-head CI subsequently passed this journey and all other E2E shards. - Both the automatic and one supported on-demand Superagent scan on `4873704be` ended neutral/inconclusive: “Pinned PR scan merge-base checkout failed or timed out.” These do not count as a passed security verdict. The current head's automatic scan and one documented on-demand retry also returned the identical neutral checkout failure, with zero annotations or further diagnostics. This is an external scanner blocker, not a passed security verdict. No security settings or permissions were changed. - Recorded decision links now render and focus the full source-task record in both Classic and Coordinator, including recorded choice, submitted inputs, and the existing effect-result resolver. Fresh terminal records take precedence over older open-decision cache entries. Context and account checks keep mismatched or inaccessible records out of the DOM; no decision-history tab was added to tasks or chat. The shared company live-run feed now drives live-only filtering, including ended runs and terminal tasks with stale run entries. All 213 focused tests, UI typecheck/build, token and whitespace checks pass; the final focus follow-up passed all 188 task-detail tests and UI typecheck. The first new navigation test failed because its test host omitted company context; the host was corrected before the passing run. - Previous integration head: `375c5e89516705050d94bab99336212841b2e6e1` merges master `1aa3a21ac` after four additional upstream commits. The sole conflict was competing imports in `server/src/services/issues.ts`; both quality-review policy and inbound wake-notice notifications are preserved. The PR-specific review import now sits beside execution-policy imports instead of the frequently changing first line. GitHub mergeability is rechecked after the push. - On the combined master tree, workspace typecheck/build, all 153 affected UI tests, map validation, and whitespace checks pass. Four server suites passed 77 tests; the fifth suite's module-import hook timed out while broad verification was running. Its unchanged isolated run passed all 41 tests in 7.2 seconds with the original timeout. This records recovery without claiming the original import-timeout cause is proven. CI on `375c5e895` passed every substantive job, including all eight E2E shards and Superagent; Greptile found the two functional gaps fixed in the current head. A short-lived `669d90876` commit added the main fixes before the focused navigation follow-up. - Immediately preceding head `9d9737b49` completed all 56 checks successfully with four conditional skips, Greptile 5/5 and no open findings, plus a successful Superagent scan. The signoff E2E shard passed on its single accepted rerun; its initial cancellation/timing failure is retained below. Master moved again while those checks ran, requiring this final integration rather than treating the prior head's green result as current acceptance. - Previous head `9d9737b496911a6054d0ea22d1b42b28b115e9ab` includes master `d30c8f42b842327ee1c18c41a2efd6ba623da5cd`; that head was subsequently conflicted by moving master. The master merge preserved durable account-bound writes and Coordinator UX. Workspace typecheck/build, 416 focused UI tests, and 142 affected comment-route tests passed. A stable full UI run on preceding head `938ad1665` passed all 9,833 tests across 836 files; its final full workspace build also passed. - Greptile found nested proposal project inheritance and Classic bound-revision links on `91be74952`. Both were fixed with 142 interaction-route tests, 113 focused UI tests, and UI/server typechecks. Its next review identified a valid draft-preservation bug in the new Classic loading UI. Head `9d9737b49` keeps loading/error notices outside editors and annotations while preserving dirty drafts; 115 focused review UI tests pass, including pending/failed revision loads and continued draft editing. All related threads are resolved. Greptile completed a fresh 5/5 review of `9d9737b496911a6054d0ea22d1b42b28b115e9ab` with no open findings. - CI on `938ad1665` exposed an integration regression with the newly merged durable startup saves: the personal preference gate blocked the task page before its first session lookup. The guarded title editor now mounts while that lookup is pending, with presentation-specific tools still gated. All 216 affected component tests pass. The unchanged five-test `disconnect-write-recovery.spec.ts` browser suite passes against a newly launched disposable local-trusted PostgreSQL instance on port 33219, including the exact failed startup-save journey. No live provider, hosted authentication or production proof is claimed. The helper-owned test server exited and the port has no listener. UI typecheck, built-browser assets, token and whitespace checks pass. - Initial durable-write merge tests found duplicate imports and unscoped draft fixtures, fixed before 416 focused tests passed. A sandbox typecheck could not create its IPC socket; the supported rerun passed. The first revision-link test used a wrong Return to latest button assertion, corrected before the 113-test pass. The startup E2E reproduction initially still failed because an outer shell gate also blocked the page; the subsequent fix passed all five cases without changing the test or its timeouts. A focused loading-header assertion initially used an incorrect fixture title; correcting it preceded the 216-test pass. These failures remain recorded. - Earlier routing gates fell back to GitHub-hosted runners while master was moving or conflicted. Superseded queued runs were cancelled, then the `938ad1665` routing gate explicitly selected the ephemeral RunsOn fleet. Its CI actively executed and completed most tests; only the diagnosed startup E2E shard and aggregate failed, alongside the valid Greptile finding. Auxiliary GitHub-hosted workflows also completed successfully on earlier heads, so queueing alone is not an administrative blocker. Fresh [CI on `9d9737b49`](https://github.com/paperclipai/paperclip/actions/runs/40744012678) is the acceptance target; the previously failing startup E2E shard now passes. A different signoff E2E shard failed during executor resubmission when its fixture run was cancelled as `issue_continuation_waiting_on_review`. The exact unchanged journey passed locally (1 test, 46 seconds), and the preceding head with identical server/signoff code passed that CI shard. This supports a bounded rerun but does not establish the timing failure's root cause. After the workflow finished, GitHub accepted one rerun of that failed shard and its dependent aggregate; both passed, completing all checks on that head. The failure log is retained at `/tmp/pr17983-9d9737-e2e7.log` and the local reproduction at `/tmp/pr17983-signoff-repro.log`. No assertion or timeout was weakened. - On the first merge, full workspace typecheck/build, all 9,622 UI tests, 267 tests across seven affected server suites, two migration checks, map validation, token gates, and the PR diff whitespace check passed. Greptile then found duplicate local task-search filtering and lost completed item-review detail. Both are fixed, with 42 passing focused UI tests and passing UI typecheck/build. - A subsequent Greptile review found attachment confirmations without working links and mobile history without a visible host. Confirmation layouts now derive the authenticated immutable-content endpoint from the attachment ID, and Needs You uses the existing full-screen mobile sheet. All 119 focused tests pass, including missing/stale display URLs, both review layouts, and both mobile history entry buttons. UI typecheck/build and token checks pass. Full workspace typecheck/build also pass after the second master merge. - Greptile gave head `22f69c304` a 5/5 score with one non-blocking desktop-history reopening finding. Head `6dd52b6d3` fixed it, passed all nine history tests, UI typecheck/build, token gates, and the full 9,679-test UI suite, then received a fresh 5/5 review with zero open findings. These are prior-head results; review on the master-sync commit is pending. - The chat and workspace CI jobs on head `22f69c304` were interrupted by runner shutdown signals and cancellation before completing their tests. Their logs do not report failing assertions. Those interrupted jobs are not claimed as passes. The new head starts fresh runs. - The first merge CI had a Slack session-sync idle assertion fail after an unexpected database read. Its exact isolated reproduction passes, and the chat CI shard passed on head `618c5a2a3`. The original failure's cause remains undetermined. The broader local reproduction, run concurrently with full verification, instead encountered 21 timeout failures across its two test chunks; it is not claimed as a passing full local server run. A concurrent local UI run had eight failures (seven timeouts and one delayed autosave assertion). The complete UI run on the final head passed all 9,679 tests across 830 files with two workers; no test timeout or assertion was weakened. This establishes recovery without claiming that every earlier timeout's cause has been proved. An earlier intermediate UI run also overlapped the second master merge and failed the newly added Advanced-sidebar expectation, so it is not treated as stable-tree evidence. The newly merged UI dependencies initially required refreshing the local install from the upstream package manifest; the generated local lockfile update is not committed, per repository policy. - Superagent returned neutral/inconclusive scans on the preceding heads because its pinned merge-base checkout failed or timed out. The available retry endpoint returned 404. These are not successful security verdicts. The fresh scan on `91be74952` passed (PR scan passed; no suspicious PR changes detected). The `938ad1665` scan again returned neutral/inconclusive with the same pinned merge-base checkout error; the check-suite rerun endpoint returned 404. The fresh `9d9737b49` scan completed successfully at 18:22 UTC with no suspicious changes detected. Earlier neutral scans are not counted as successful security verdicts. - Prior head `57902152ac3218096fca669d33ff18400a2a86ae` passed 9,618 UI tests across 826 files, received Greptile 5/5 with no open findings, and completed CI with 56 passes and four conditional skips. These are historical results, not acceptance of the latest merge commit. - The first full build found generated capability-contract drift. The generated outputs were refreshed. Initial sandbox runs could not open local IPC sockets; verification was rerun with local test access. - Current master was merged. The workspace preference migration was regenerated after the existing migration history. - The UI run first found two outdated expectations: early custom-answer validation and the document access error copy. Both were corrected, and the full UI suite then passed. - The local server run found three failures in unchanged tests. The Muse test passes with Python 3.13 instead of the host's Python 3.9. The two workspace tests pass when their test process uses the expected master default branch. These environment settings do not change application behavior or global machine settings. The unsharded server run was stopped after those reproductions; CI supplies the full sharded server result. No successful full local server run is claimed. - Skill inventory generation needs an external eval checkout, which is absent locally. The existing generator functions refreshed only the live skill inventory and its derived files. The checked-in eval inventory was preserved. The inventory validation gate passes. - Greptile found a dropped MCP review requirement, missing per-item output links, generic item-review summaries, and a history-refresh failure. The fixes have 32 passing database-backed server tests and focused rendered-card tests. A follow-up partial-review finding was corrected by forwarding the canonical mutation status before settling the card. Attachments open through the authenticated immutable-content route in both card layouts. The final focused UI set has 117 passing tests, including these regressions. - Both browser shards that first failed expected a disabled-chat message. The copy was restored, and those shards passed in CI on the next commit. The two journeys also passed locally. One local attempt first timed out before feature disable while waiting for the provider's initial message; its isolated reproduction passed. That earlier timing failure remains recorded and is not presented as an explained infrastructure failure. - Serialized server shard 9 first failed during pnpm setup with ECONNRESET, before dependencies or tests ran. Its single rerun passed setup and all tests. The build and production runtime boot passed on the first attempt, but that run's public-install step timed out during Pi setup. The single build-job rerun passed compilation, runtime boot, and clean public-install verification. Those setup scripts are unchanged by this PR. The successful retry establishes recovery; the earlier Pi timeout's underlying cause remains undetermined. The aggregate CI gate is green: [workflow run](https://github.com/paperclipai/paperclip/actions/runs/40637789695). </details> ## Risks - This touches shared task, interaction, and completion paths. Regression tests must cover classic and experimental behavior, authorization, duplicate answers, and stale review targets. - The additive preference table must migrate before the setting is used. The setting defaults off. - The experiment changes navigation and message presentation. Canonical task and document records remain the source of truth. - The initial task brief and saved plan can repeat information. This change fixes chronology; a broader redundancy policy remains a design decision. ## Model Used OpenAI GPT-6 Codex with reasoning and tool-assisted code editing, tests, and browser verification. Earlier iterations used Codex models in this task; their exact model IDs are not available in the current context. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used - [x] I have checked ROADMAP.md - [x] I have searched GitHub for duplicate or related PRs - [x] I have described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links - [x] My branch name describes the change - [x] I have run relevant tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation - [x] I have documented risks - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open recommendations or follow-ups - [x] I will address review comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-28 17:20:01 -07:00
Nicky LeachandPaperclip	c57af3c564	Reuse prepared Runner storage and installed skill selections (#18089 ) <!-- entire-trail-link-start --> https://entire.com/gh/paperclipai/-/trails/207/changes/paperclip/207 <!-- entire-trail-link-end --> ## Thinking Path > - Paperclip manages AI agents and their work. > - The native Runner prepares selected skills, instructions, and provider storage. > - Repeated preparation imports the company skill inventory and rebuilds Claude storage. > - Execution environments can already maintain prepared resources. > - This pull request lets them reuse account storage while Core keeps execution policy. > - New retry runs resolve current skills and keep the failed attempt's history. ## Linked Issues or Issue Description What existing behavior does this improve? Native Runner preparation and retry skill selection. Current behavior Explicit installed selections still trigger company inventory reconciliation. Plugin preparation receives account identity only on warm transitions. Claude's isolated mode requires a session-specific configuration directory. Proposed behavior Skip inventory imports when explicit selections are installed, while retaining current authorization and version resolution. Send account identity on initial preparation. Allow an execution environment to provide persistent Claude storage without enabling preconfigured permission behavior. A new retry resolves current skill assignments. Reason and benefit Remove repeated preparation work without adding environment-specific policy to Core. Related: #13984 describes a similar storage-lifetime problem in the separate claude_local adapter; this PR does not change that adapter. ## What Changed - Derive Claude’s configuration path from the single authoritative prepared-storage input; separately supplied CLAUDE_CONFIG_DIR values are overridden. - Add an explicit prepared Claude storage binding, forward it to the sidecar, and retain recovery and provider lifetime fencing. - Refresh Core-owned Claude settings after acquiring the lifetime lease. Reuse environment-prepared skills. - Reuse installed explicit skill selections and preserve missing-selection initialization and current access checks. - Reserve the prepared-home marker for environment provisioning; task overrides are rejected and configured bindings are stripped before native launch. - Clear inherited skill selection snapshots on new retries. Keep admitted execution recovery and failed attempt metadata. ## Verification - Current single-input follow-up `8dbc2f6ec`: 154 focused Runner checks pass with one existing skip; four Grok identity checks and four Pi packaged-probe checks pass. Shared immutable source identities advance to Grok10/Pi32/Copilot74. All56 current-head CI checks pass (four intentionally skipped); standard and enhanced reviews are both5/5 with no unresolved threads. - Focused Runner sandbox tests: 29 passed. Focused environment tests: 16 passed. - company-skills-empty-runtime: 10 passed. - Plugin Runner and runtime selection database tests were attempted. Local execution is blocked because embedded PostgreSQL cannot load libzstd.1.dylib; these checks remain for CI. - New database regressions cover installed-selection reuse, initial account preparation, and retry snapshot removal. - Prepared-home trust-boundary regressions: 4 targeted checks passed (task schema, all env binding scopes, native executor). - Focused Pi public-install probe checks: 4 passed. The build smoke probe now asserts the current Pi 32 profile and exact digest. - CI found and fixed retry-context TypeScript inference, stale Pi identity fixtures, Docker source identity inputs, and the skill-observability test’s old assumption that every selection imports inventory. Cold and reused selection coverage remain. - CI chat shard 2 initially failed three GitHub/Discord idle-database assertions. An unchanged-head rerun passed; the original cause remains unexplained. - Runtime head `f5b53679a` passes all 56 current CI checks (four jobs intentionally skipped), including the full build/public-install probe, TypeScript, Rust, Runner and server matrices. Greptile is 5/5 with no unresolved review threads. - The requested enhanced review scored 5/5 on `f5b53679a`, with one nonblocking documentation request. Documentation follow-up `1ac5d26a8` adds only the documented existing ownership/0700 requirement; the thread is resolved and all 56 current-head checks pass (four intentionally skipped). The subsequent single-input runtime follow-up8dbc2f6ec repeated the complete CI → standard5/5 → enhanced5/5 cycle successfully. - Broader verification is delegated to GitHub CI as requested. The initial policy check rejected a generated lockfile repair; that change was removed because Core CI already resolves stale importer entries. ## Risks Prepared storage must be provisioned by the execution environment before launch. It is not credential isolation. Core replaces managed Claude settings under the existing provider lease. No new per-run harness homes are created by this option. New retries may select a newer skill version; recovery of an already admitted provider execution keeps its saved input. ## Model Used OpenAI Codex, GPT-6 family, with reasoning and tool use. The exact model revision is not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked related context above - [x] I have described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links - [x] My branch name describes the change - [x] I have run focused local tests; database and full verification remain for CI as explained above - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation - [x] I have considered and documented risks - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-28 17:09:24 -07:00
DottaandPaperclip	8bc051245f	fix(server): wake stale GitHub review repair from committed changes (#17664 ) <!-- entire-trail-link-start --> https://entire.com/gh/paperclipai/-/trails/215/changes/paperclip/215 <!-- entire-trail-link-end --> ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - GitHub checks and task admission can finish in either order. > - A check can reject an old head before admission creates its review row. > - The chat maintenance loop repeatedly scans for that late review. > - Existing cancellation and delivery receipts already identify the repair. > - This pull request wakes repair from committed changes and leaves settled history quiet. ## Linked Issues or Issue Description What happened? GitHub chat maintenance repeatedly scans all review projections. Empty instances and retained history incur database work even when no repair is owed. What did you expect? A committed stale-head cancellation or admitted review should wake repair. Only the exact delivery's unassessed queued/running review should become superseded. When no repair remains, this duty should stop making database calls. Steps to reproduce Configure a GitHub chat endpoint and leave it idle after all reviews settle. The previous maintenance callback continues to call repairSupersededReviews. A rapid push can also cancel a check before admission inserts its review, which explains why recovery must remain. Refs #17662, the merged review-check publication parent. Related #17661 and #17656 migrate terminal responses and acknowledgements. This slice owns only late stale-head projection repair. ## What Changed - Move the repair predicate and execution into the GitHub provider owner. Match the original admitted delivery and cancellation receipt. Recheck state and assessment in the update. - Register a scoped worker with the existing coordinator. Use keyset pages and fair bounded dispatch. Keep retries only for unresolved repair or failed reconstruction. - Signal before cancellation, automatic receipt insertion, automatic-review binding, and check-driven review-state writes. Preserve existing transaction ownership and outer commit behavior. - Remove the periodic provider wrapper and publication-maintenance callback. Preserve explicit manual recovery and independent missed-webhook recovery. - Add two concurrent, idempotent partial indexes. Use a guarded delivery UUID lookup and a bounded exact-receipt lookup. Add no tables. - Add ten real-database lifecycle and producer cases. Document the producer audit, failure history, and remaining limits. - Keep YAML browser reads scoped to the editor after focus changes, with the original journey assertions and deadlines. ## Verification Current source: `0886a0229b1c4f68d2f582da86aa1f248e9124f3`. - At `dd6bca0485c3444d6e3d0ee10ec4aa651e801392`, 287 distinct cases pass: 274 complete GitHub workflow cases and 13 startup cases. The GitHub command filters out 1,485 unrelated cases. The workflow suite uses a new, pre-migrated PostgreSQL database. - Coverage includes both orders of cancellation and admission, outer commit and rollback, restart, drain, standby, failed-update retry, concurrent assessment under an observed row lock, shutdown during that wait, more than one candidate page, manual history, and settled-history quiet. - Database build, server typecheck/build, module boundaries, and target migration order pass. - Canonical migration `0403_natural_cerise.sql` preserves both original index definitions and concurrent idempotent creation. All 401 parent migration receipts remain unchanged during upgrade. One new receipt is added. Replay adds none. Both indexes are ready and valid on fresh and upgraded databases. The five newest snapshots remain. - The normal parent merge preserved the prepared tree. The later browser fixture repair changes only its central read helper and verification note. Entire server, package, and UI trees remain identical to the accepted source. - [The owning audit](https://github.com/paperclipai/paperclip/blob/0886a0229b1c4f68d2f582da86aa1f248e9124f3/doc/plans/2026-10-25-github-review-projection-sleep-audit.md) records the exact evidence and earlier failures. Earlier query-plan measurements retain their historical revision scope. - Fresh current-head CI and Greptile review remain required. No deployed sleep, full repository-suite, or fleet-savings claim is made. Failure accounting: browser shard 7 failed twice on `1453a4447c0d4d33f713ae3e00734c7950f95426` because the YAML helper read whole-page clipboard text while main was focused. Three isolated unchanged local passes did not resolve that failure. A controlled native focus-loss probe reproduced the same error before the repair and passed after it. The helper now clears stale clipboard data, focuses the editor, and waits within the existing expectation budget for a fresh YAML copy. All six complete YAML journeys pass with zero retries in 50.9 seconds. Journey assertions and deadlines are unchanged. The temporary fault is removed. The exact CI focus-change trigger remains unknown. [Both CI attempts](https://github.com/paperclipai/paperclip/actions/runs/40777754306) remain part of the verification record. Fresh new-head checks are required. Ponytail follow-up: the 4/5 review of `b3c81ba` was conditional on fixing a stale startup-test slice marker, so the merge was held. Boundary assertions reproduced the invalid -1 end index. The test now uses the existing timer declaration and checks both bounds; all 13 startup/hostname cases pass. The optional no-op coordinator cleanup is already in #17666. The six YAML journeys and all production code remain unchanged. Fresh review and CI are required for this corrected head. ## Risks - Missing a future producer signal could delay discovery until restart. Supported writers share the current database owner's process-local notification scope. Independent SQL writers and other server processes need their own integration. - The migration builds indexes concurrently. The existing migration runner handles interruption and invalid index recovery. - Direct GitHub missed-webhook discovery remains periodic. This change does not make the whole chat service idle. - Existing Cloud wake coverage and sleep blockers remain unchanged. These tests do not prove deployed host or database suspension. - Each remaining sleep slice needs its own review and CI checks before merge. ## Model Used OpenAI Codex (GPT-6), with reasoning and code execution. The exact serving model ID and context-window size were not exposed. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-28 18:42:54 -05:00
DottaandPaperclip	65fa1cd617	fix(server): schedule GitHub review checks from committed changes (#17662 ) <!-- entire-trail-link-start --> https://entire.com/gh/paperclipai/-/trails/213/changes/paperclip/213 <!-- entire-trail-link-end --> ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - GitHub review checks report the state of admitted agent work. > - The chat maintenance loop searches for check work even when none remains. > - Existing action rows already record unfinished publication and retry deadlines. > - Committed changes can wake those rows through the shared coordinator. > - An unresolved check must still detect a remote head change when a webhook is missed. > - This pull request schedules only outstanding checks and leaves settled history quiet. ## Linked Issues or Issue Description What happened? The GitHub chat maintenance callback repeatedly queries review-check actions. Empty queues and completed history still incur database reads. Local state changes wait for the maintenance callback. Expected behavior Committed check creation, review binding, run changes, and publication-lease release wake the worker. Existing retry and remote-head deadlines apply only to unfinished checks. A settled worker makes no recurring database or provider calls. Steps to reproduce Configure a GitHub bot with no outstanding checks, or finish all of its checks. Leave the instance idle. The old maintenance callback continues to call the check service. Refs #17661, the merged terminal-response parent. Related #17656 migrates response acknowledgements. Related #16385 changes branch-policy admission; this PR preserves that separate policy boundary. Late stale-head projection repair remains a separate follow-up slice. ## What Changed - Move the existing check-state reader into the GitHub provider owner. Preserve current authority, run selection, assessment ownership, and check replacement behavior. - Register a scoped worker with the existing coordinator and scheduler. Existing received and retryable-failed actions remain durable truth. No new table is added. - Signal check enqueue, task review receipts, manual review insertion/binding, run lifecycle changes, and publication-lease release through existing transaction ownership. - Preserve the saved failure backoff, eight-attempt policy, and competing lease expiry. Keep five-second remote-head reconciliation only while a received check remains unresolved. - Check admission before each HTTP request. Shutdown leaves durable work recoverable without spending a provider failure attempt. - Remove check dispatch from the periodic GitHub callback. Keep the separate late-projection repair and the manual combined recovery method compatible. - Add an idempotent concurrent partial index for unfinished check selection. Retain the newest five generated snapshots. - Add eleven real-database worker cases and startup wiring coverage. Document producer coverage and the external reconciliation limit. ## Verification Current reviewed source: `2bba08403b195bf646eda48992b46d6f5cebf756`. - Normal merges preserve the complete review-check patch, the landed terminal-response parent, and current master changes. No landed SQL migration or journal entry changes. - At `6995f84b240a14a7b8660e1cf095b3aa1e1e3168`, 331 distinct tests pass: 264 complete GitHub workflow cases, 30 completion cases, eight issue-tree producer cases, 16 login-cleanup cases, and 13 startup cases. The GitHub command filters out 1,485 unrelated cases. Login cleanup uses its real embedded PostgreSQL fixture. - Combined-master acceptance: 277 distinct tests pass at `9c538aed1251fd7f7cecb829a0ecbce6110fb1ed`: 264 complete GitHub workflow cases and 13 startup cases. The GitHub command filters out 1,485 unrelated cases. A new PostgreSQL database receives all migrations through 0402.. - Migration `0402_ancient_malice.sql` preserves the original partial index definition and concurrent idempotent creation. All 400 prior migration receipts stay unchanged during upgrade. One new receipt is added. Replay adds no receipt. The index is ready and valid on fresh and upgraded PostgreSQL databases. The five newest snapshots are retained. - A rollback-only query probe adds 10,000 processed actions and one pending action. The actual parameterized candidate predicate selects the one pending row through the partial index, with two shared buffers and 0.007 ms execution time. This measures candidate discovery, not all lease or provenance reads. - Database build, server typecheck and build, module boundaries, migration safety and migration order pass. Audit: [GitHub review-check scheduling](https://github.com/paperclipai/paperclip/blob/2bba08403b195bf646eda48992b46d6f5cebf756/doc/plans/2026-10-25-github-review-check-sleep-audit.md). - Fresh checks and Greptile review are required for this head. Prior scores do not count. These checks do not prove deployed host suspension or fleet savings. ## Risks - Unresolved queued/running checks still make remote-head requests at the existing five-second deadline. GitHub webhook receipt does not prove future pushes cannot be missed. This PR does not claim active reviews become network-idle. - Run and configuration hints rebuild outstanding checks for the affected company. Enqueue, review, and lease hints narrow to the affected endpoint/repository/PR. Startup and scope reconstruction read existing pending rows; they are not constant-cost operations. - Delivery admission failures remain discoverable through the unresolved check's external reconciliation deadline. Not every shared delivery mutation gains a new immediate signal. - Notifications use the existing process-local database ownership contract. Independent SQL writers and other replicas need their own supported integration. - Provider markers, publication leases, and saved actions preserve recovery after uncertainty. This change does not expand Cloud alarm coverage or prove deployed host/database suspension. - Each remaining sleep slice needs its own review and CI checks before merge. ## Model Used OpenAI Codex (GPT-6), with reasoning and code execution. The exact serving model ID and context-window size were not exposed. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-28 17:08:27 -05:00
DottaandPaperclip	f8226b0515	fix(server): wake GitHub terminal responses from committed changes (#17661 ) <!-- entire-trail-link-start --> https://entire.com/gh/paperclipai/-/trails/210/changes/paperclip/210 <!-- entire-trail-link-end --> ## Thinking Path > - Paperclip coordinates agent work and presents results in chat. > - GitHub acknowledgements already persist the response action and provider receipt. > - A terminal run can still owe a final response after acknowledgement. > - Periodic maintenance searches those rows even when no relevant state changed. > - Committed run, issue, presentation, lease and publication changes identify when recovery can advance. > - The owner should recover from those events and real deadlines, then become quiet. ## Linked Issues or Issue Description Refs #17656, which is merged. This existing terminal-response slice targets master. Problem: A saved GitHub response can remain nonfinal while its run, native presentation, publication or source is unresolved. Removing maintenance without covering those producers loses recovery. Polling settled history keeps the tenant active. Expected behavior: Committed supported changes wake the terminal owner. It reconstructs existing actions, preserves provider authority and pending publication ownership, waits at saved deadlines where needed, and becomes quiet after settlement. ## What Changed - Register terminal GitHub response work with the shared scoped deadline coordinator, using existing action/delivery/publication/run rows. - Notify response availability from supported run milestones, native identity, recovery resolution, issue updates and tree/workspace restoration writes. Preserve outer transaction commit/rollback. - Keep GitHub response interpretation in its platform owner. Use the bounded run projection for both direct authorization and scheduling, including native presentation guards and deliberate passive outcomes. - Retain the existing publication lease, markers, source/principal checks and final receipt precedence. A publication owner or uncertain outcome keeps its existing authority; the worker does not replay it. - Remove only recurring terminal-response recovery, preserving the manual path and neighbouring duties. Add no table or scheduler service. - Regenerate the original sparse terminal-work index as `0401_yummy_ultimates.sql`, concurrently and idempotently through the existing top-level migration runner. Preserve all prior SQL/journal entries and the five newest snapshots. ## Verification Published head: `88a209e28b969b5229e9a621aeddfd3cbae9b0cd`, integrated with landed #17656 (`ba5bba86dcdde32b14d4d7dec1b51898e5f6f22d`) and master `52b86c2032a189b0ea259c5b0cb7158b07ef788c`. - 74 distinct current cases pass: 17 terminal-response lifecycle/producer cases (1,721 other chat cases skipped), all six queued-comment consumption regressions for the new upstream query optimization, all 30 heartbeat completion cases, all eight real/unit issue-tree control cases and all 13 startup cases. Database build, server typecheck/build, module boundaries and four fresh migrations through 0401 pass. - The earlier 304-case prepared-parent matrix passes at `aa72f32641b2e2c680342cd49477272349aca9db`: all 253 GitHub workflow cases, 30 completion cases, eight issue-tree cases and 13 startup cases. It retains that revision scope. Repeated cases are not added to the current 74. - The terminal matrix covers finalized-history quiet, deleted Board sources, pending presentation/passive outcomes, outer rollback/commit, paused/new runs, restart/drain/standby, committed native identity, lease waits, full-page unrelated history, uncertain publication ownership and tree/workspace/exhausted-recovery producers. - A populated 0400 database upgrades to 0401 with all 399 prior migration receipts identical, exactly one added, and none added on replay. The terminal index is valid/ready on fresh and upgraded databases. Its SQL matches the original draft after whitespace normalization; generation keeps snapshots 0397–0401. - Normal integration `3c8339a541bf68bc9957b9d5a8df80d3a7c3452d` preserves the complete 24-path owned binary patch and all five new master paths. The landed parent tree also equals the previously published parent tree byte for byte. Both normal merge parents and the exact composition tree are checked. No force push or rebase occurs. - [The owner audit](https://github.com/paperclipai/paperclip/blob/88a209e28b969b5229e9a621aeddfd3cbae9b0cd/doc/plans/2026-10-25-github-terminal-response-sleep-audit.md#acceptance-on-the-landed-github-parent-and-current-master) preserves the original producer, quietness, failure-isolation, skipped-suite and presentation-wait results with their scopes. Current passes do not erase earlier failures or turn skips into passes. - The audit-only follow-up leaves all owned source/test/migration hashes unchanged. Fresh exact-head CI and Greptile 5/5 with no actionable findings remain required. No full local repository suite, live GitHub tenant or deployed sleep result is claimed. ## Risks - Process-local notifications cover supported application writers and shared pools. Independent SQL writers and other replicas gain no new wake guarantee. - Native terminal status alone does not authorize fallback publication. Pending presentation and existing publication ownership remain separate obligations. - Stop can leave an in-flight provider request settling; admission fences stop a subsequent request. Unknown outcomes retain their existing recovery rules. - Index creation can take time on large histories. Concurrent/idempotent migration and existing replay recovery remain in charge. - Worker quiet does not establish host/database suspension. Cloud alarm coverage and sleep admission remain unchanged. ## Model Used OpenAI Codex, using reasoning, repository inspection, code execution and real PostgreSQL tests. The exact model identifier and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-28 16:51:57 -05:00
DottaandPaperclip	f8484a9f8d	fix(native): deliver selected skills to remote Codex homes (#18080 ) ## Thinking Path > - Paperclip coordinates company agents and preserves their assigned instructions and approval rules. > - Native runs pin an immutable skill inventory for each execution. > - Built-in remote Codex launches prepare that inventory on the controller, but transfer only authentication, configuration, and the separate context assets. > - Codex needs the selected skills under its isolated home. An explicit skill path does not load a skill outside its registered discovery roots. > - This pull request transfers the sealed selected inventory to the path already used by explicit skill inputs. > - Each launch replaces stale assignments inside the authorized workspace while preserving provider history. ## Linked Issues or Issue Description Refs #18025. The corrected first-task instructions exist in the selected bundle, but remote Codex must receive those bytes before it can follow them. The legacy skill resolver work in #16646 and #9323 uses different paths and does not repair native remote launch staging. What happened? A fresh remote native Codex run could not read its assigned first-task skill. It produced an approval question instead of the required confirmation. The Product E2E journey correctly rejected that question before child creation. Expected behavior Codex receives the selected immutable skill at the same provider-local discovery path used by explicit skill input. Removed or unassigned skills do not remain available after a new launch. Steps to reproduce 1. Prepare an isolated Codex home with one assigned skill. 2. Run the built-in remote launch staging path against a fresh remote filesystem. 3. Resolve an explicit invocation of that skill. Before the repair, its provider-local file is missing. ## What Changed - Transfer only the prepared selected skill inventory into the isolated remote Codex home before other launch writes. - Reject writable files, symlinks, missing entries, and extra unassigned packages in the controller projection. - Validate each provider-home path component below the authorized workspace. Reject redirected retained paths before deleting stale skills. - Create the private discovery root before native sandbox transfers, which omit the source-root metadata and can ignore the requested directory mode. - Replace stale or empty inventories without changing provider conversation history, preconfigured homes, other providers, or plugin-provided launch preparation. - Exercise the real home materializer and turn resolver through the existing test-only Runner surface. Document the remote discovery contract. - Synchronize an existing Telegram attachment-failure test with the durable provider-effect commit, preserving its required final states. This CI repair is a separate test-only commit. ## Verification - The new production-staging regression failed before the repair because the resolved skill file was absent. - All 23 focused staging checks pass. They cover delivery, file modes, empty/revoked inventories, history retention, extra packages, writable files, source symlinks, target symlinks, redirected ancestors on sandbox/SSH, and an authorized workspace alias. The filesystem fixture packs and extracts actual tar bytes without applying the requested root mode; it preserves exact projected-file digests and executable bits. - The unchanged materializer and prepared-launch contracts passed 26 tests. Eight selected native caller checks passed; other cases in that filtered run were not selected. - Independent probes used official Codex 0.160.0, the real materializer, production staging, the real resolver, and a local model endpoint. The original staging supplied no skill message. The final staging supplied the complete selected skill body with its exact SHA-256. A final probe also ran production Daytona `performSyncIn`, backing only its SDK exec/upload/chmod edge with the local filesystem under umask `022`: the pre-review source reproduced root `0755`, and the final source retained root `0700`, package `0555`, file `0444`, and the exact selected digest. All model requests returned local 403; there were no upstream requests or credentials. - Full local `pnpm -r typecheck` and `pnpm build` passed on verification commit `e7d4e7a9`, based on `60b8089a`. The full local `pnpm test:run` on that frozen tree was not completed: later embedded PostgreSQL startup failed because the host could not allocate semaphore sets (`semget`, SEMMNI/SEMMNS), and the owned attempt was stopped with its log preserved. Its earlier four caller-fixture failures and one workspace-conflict failure are recorded separately below; the later resource error is not an explanation for them. Delivery commit `567d838d` replayed the initial six-file patch onto `ee67d2ec`; production was last changed in `23456f51`, followed by test-only commits `002fa4a7` and `6e8fa595`. All 24 staging checks, all 26 materializer/prepared-launch checks, and the complete native executor file (968 tests, zero skipped) pass locally. Server typecheck also passed after these test edits. The complete CI matrix passed on `002fa4a7`; current-head CI is tracked separately. - Initial-head CI exposed four caller fixtures that manually wrote auth/config without preparing the skills inventory. The same four failures reproduced locally. Those fixtures now use the real home preparer for their existing empty inventory and assert its transfer; all 34 retained/replacement scenarios and the complete 966-test caller file pass. A sandboxed full-file attempt could not bind local PostgreSQL (`EPERM`); it was stopped with its log preserved, then the identical command passed with local fixture access. Initial-head CI also recorded timeouts in workspace recovery, approval-queue backoff, and heartbeat attribution. Their three complete files pass unchanged locally (102 tests); the next CI head also passed those cases. The original slowdown remains unexplained. The consequent approval cleanup foreign-key failure is a timeout teardown race already recorded in the owning worker documentation. - The frozen full local run also observed an existing workspace-conflict test fail. The test and owning workspace code are unchanged between the verification and delivery trees, and the isolated delivery case passes. The original failure remains unresolved: stopping the later resource-blocked run prevented the final assertion detail from being emitted. That isolated pass does not replace the earlier result. - CI on `23456f51` caught a Telegram test reading `provider_effect=processing` after observing the provider mock call. Production commits `processed` later, so the test now waits for the unchanged complete durable-state assertion. All 18 selected Telegram attachment/media cases pass (the other 1,670 cases were not selected). The same CI attempt also recorded an E2E runner shutdown followed by cancellation, without a failed Playwright assertion; the necessary new test-only head reruns the matrix. Earlier failures remain preserved and are not reported as passes. - Review requested an executor-level preconfigured-home negative test. Retained and replacement workspace cases now drive the actual launcher, assert successful context staging, and exclude the isolated home's skills/auth/config transfers. A counterfactual that removes only the executor exclusion makes both tests fail; the exact production bytes were restored before the complete 968-test pass. Flat and nested selected package delivery is also covered. Optional arbitrary remote-stderr expansion is deferred; the repair keeps the existing closed error code and report surface. - Final head `6e8fa595` passes the complete CI matrix, including typecheck, build, Runner, browser, and aggregate gates. Two first-attempt jobs were interrupted by runner shutdown/lost communication; one unchanged-head rerun of those jobs and their aggregates passed. The underlying host interruption cause remains unknown. Both current-head automated reviews are 5/5 with the implemented finding resolved. - The original checked-in lockfile fails a fresh frozen install on the baseline. The repository's maintained resolution-then-frozen sequence passes. No lockfile change is included. - Independent source review found and then verified the retained-ancestor guard. This PR does not claim that the full live Cloud onboarding campaign has passed. It changes no journey assertion or approval gate. ## Risks Launch preparation adds an asynchronous inventory walk, one bounded remote cleanup command, and one transfer of the selected skill tree. Those costs grow with selected files and bytes and occur only at provider launch. A failed validation, cleanup, or transfer prevents launch. Remote Node is already required by the shared SSH/sandbox launcher. The selected packages remain read-only; the private discovery root retains Codex's normal writable mode. No database, API, credential-routing, or deployment change is included. ## Model Used OpenAI Codex based on GPT-6, with reasoning, source inspection, tool use, and code execution. The host does not expose the exact serving model ID or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-28 16:37:13 -05:00
DottaandPaperclip	ba5bba86dc	fix(server): wake GitHub acknowledgements from committed changes (#17656 ) <!-- entire-trail-link-start --> https://entire.com/gh/paperclipai/-/trails/206/changes/paperclip/206 <!-- entire-trail-link-end --> ## Thinking Path > - Paperclip coordinates agent work and presents its progress in chat. > - GitHub deliveries save acknowledgement actions and provider receipts. > - Periodic maintenance currently searches for unfinished acknowledgements even when idle. > - Committed delivery, lease, response and presentation changes identify when work can advance. > - The existing owner should wake on those changes and recover only at saved deadlines. > - Completed history should become quiet without losing unfinished provider effects. ## Linked Issues or Issue Description Refs #17653, which is merged. This existing GitHub acknowledgement slice targets master. Problem: A saved GitHub acknowledgement can wait for a publication lease, fast-response result or native presentation decision. Polling empty or unchanged work keeps the tenant active. Removing maintenance without covering these producers can strand the acknowledgement. Expected behavior: Committed changes wake the scoped owner. It reconstructs existing actions on startup, retries at saved deadlines, parks unchanged presentation waits and becomes quiet when settled. ## What Changed - Register GitHub acknowledgement work with the shared scoped deadline coordinator. Reuse existing action, delivery, lease and fast-response rows. - Add transaction-aware response-availability notifications at supported writes. Keep GitHub protocol details in its platform owner and shared notifications limited to IDs. - Share the bounded latest-request/run projection between scheduling and direct response authorization. An absent native presentation decision parks the action until its real writer commits. - Retain publication leases, source/principal authority, version fencing, response markers and final receipt precedence. Check admission before each new provider request; let in-flight work settle. Stop does not consume the provider retry budget. - Remove only recurring acknowledgement recovery and keep its manual path. Add no work table or scheduler service. - Regenerate the three original indexes as `0400_absent_phantom_reporter.sql`: pending acknowledgement IDs, fast-response delivery lookup and publication comment/destination lookup. Each uses concurrent/idempotent creation and the existing top-level migration runner. Preserve all landed SQL/journal entries and the five newest snapshots. ## Verification Published head: `09ca00b9f029838434ec042cda691345d67b493e`, on landed continuation parent `063cfd43813cabf18417605fb9eefb9aacf95c8d`. - 87 distinct current cases pass: 18 real PostgreSQL acknowledgement lifecycle/presentation cases, all 26 fast-response service cases, all 30 heartbeat completion cases and all 13 startup cases. Database build, server typechecking/build, module boundaries and three fresh migrations through 0400 pass. The current Runner bundle rebuild also passes after upstream provider-event changes. - The lifecycle matrix covers empty/history quiet, lease release, restart, drain/standby, fast-response failure/expiry/publication/unknown outcome, streaming quarantine, outer rollback/commit, saved provider retry, stop between requests and receipt state. The real presentation writer proves quiet while pending, rollback, committed reactivation and final quiet. - The earlier 305-case matrix (236 full GitHub workflow cases, 26 fast-response service cases, 30 completion cases and 13 startup cases) passes at `337f272853d4f8a51b5b9300900a46eb4e13f698`. It retains its prepared-parent scope. Repeated cases are not added to current 87. - A populated 0399 database upgrades to 0400 with all 398 prior migration receipts unchanged, one new receipt and no additional receipt on replay. All three indexes are valid/ready on fresh and upgraded databases. Their SQL definitions match the original draft after whitespace normalization; migration history and retained snapshot bytes are preserved. - Normal integration `9b3607e159153e00ccdfe538d52b591bd38d6499` preserves the full 28-path owned binary patch and all 20 unrelated master paths, including native retry, provider-event and evaluation workflow changes. Both normal merge parents and the exact tree are checked. No force push or rebase occurs. - [The owner audit](https://github.com/paperclipai/paperclip/blob/09ca00b9f029838434ec042cda691345d67b493e/doc/plans/2026-10-25-github-chat-maintenance-sleep-audit.md#acceptance-on-the-actual-landed-continuation-parent) retains the original missing-notification, JSON precedence, receipt lifecycle, external-database fixture and migration-registry failures. Earlier 69/228/broad counts keep their original scope. Skips and failed revisions are not relabelled as current passes. - The final audit-only edit leaves all owned source/test/migration hashes unchanged. Fresh exact-head CI and Greptile 5/5 with no actionable findings remain required. No full local repository, live GitHub tenant or deployed sleep result is claimed. ## Risks - Process-local transaction hints cover supported application writers and shared pools. Independent SQL writers and other replicas do not gain a new wake guarantee. - Provider effects remain guarded by the existing publication lease and current source/principal authority. Unknown outcomes retain their existing recovery semantics. - Presentation waits depend on their supported milestone/transaction producers. A missing producer can defer recovery until another supported change or restart. - Index creation can take time on large histories and runs concurrently outside a transaction. Existing migration recovery handles replay; prior SQL is unchanged. - Worker quiet is distinct from host/database suspension. Cloud wake coverage and sleep admission remain unchanged; later maintenance duties are separate slices. ## Model Used OpenAI Codex, using reasoning, repository inspection, code execution and real PostgreSQL tests. The exact model identifier and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-28 16:06:42 -05:00
DottaandPaperclip	063cfd4381	fix(server): wake interaction continuations from committed responses (#17653 ) <!-- entire-trail-link-start --> https://entire.com/gh/paperclipai/-/trails/204/changes/paperclip/204 <!-- entire-trail-link-end --> ## Thinking Path > - Paperclip coordinates agent work and human approvals. > - Human decisions already persist the continuation action that resumes an agent. > - A response can commit before its callback or publication finishes. > - Periodic maintenance repeatedly discovers those rows, including when idle. > - Committed writes should wake the existing owner; saved retries and claims supply real deadlines. > - Startup reconstructs durable work, and settled history becomes quiet. ## Linked Issues or Issue Description Refs #17651, which is merged. This existing continuation slice targets master and removes its duty from periodic chat maintenance. Problem: A saved `interaction_wakeup` action can survive a committed human response whose callback crashes. Without producer coverage, removing maintenance strands the continuation. Repeated empty maintenance also keeps the database active. Expected behavior: The outer transaction's settlement wakes the continuation owner. It handles ready conversation publications, dispatches under existing authority, preserves interrupted/retry work, and becomes quiet after settlement. ## What Changed - Register continuation recovery with the shared scoped deadline coordinator. Reconstruct existing issued/processing actions and retain the existing retry and stale-claim deadlines. - Notify from both enqueue producers and owner-local claim/settlement writes. Preserve outer commit/rollback and avoid moving provider or heartbeat calls into database transactions. - Give the existing publication queue an optional company/endpoint/conversation scope. The continuation owner gives ready cards in that conversation a bounded delivery opportunity before claiming the action; FIFO, capacity, ambiguity and provider authority remain with the queue. - Carry admission/cancellation through publication preparation and check before every new send. Join in-flight requests and retain pending actions/publications through drain, standby, shutdown and resume. - Remove only recurring continuation recovery; keep the manual API. Add no table. A concurrent partial index on existing pending continuation actions and matching company/id keyset paging prevent retained history from being scanned. Parent #17651's indexed confirmation discovery and current master are retained. ## Verification Published head: `a1d16f84b3fae361d5d648670a5964486370c3a3`, on actual landed terminal-confirmation parent `ee67d2ece9bda157dfad9bdf25175b1d004ed341`. - 75 distinct current cases pass: 32 selected real PostgreSQL chat cases (14 continuation lifecycle/producer/stop cases, one new continuation query-cost case, and 17 parent confirmation/query-cost cases; 1,671 skipped), and all 43 cases in complete interaction-publication and app/startup suites. Database build, server typecheck/build, module boundaries and fresh migrations through 0399 pass. The original landed-parent matrix passed 74 cases before the additional query-cost repair; those are not added again. - The new real-SQL regression seeds 20,000 completed/unrelated actions and one pending processing claim. Before repair it examines 20,345 rows and hits 20,421 buffers. The final startup and company-scoped queries must examine at most two action rows and fewer than 20 action buffers; empty scoped recovery must also stay below 20 buffers. Planner settings are unchanged. Migration `0399_ambitious_onslaught.sql` is concurrent/idempotent and uses the existing top-level migration runner; prior SQL/journal entries and the five newest snapshots are preserved. - The matrix covers callback recovery, concurrent responses, malformed prefixes, more than one page, saved retries/stale claims, outer rollback/commit, deferred/future/paused publication states, restart, drain and stop before each new provider request. Quiet assertions inspect real selects/transactions across virtual idle time. - Normal integration `db5a84c0f8b73a0ce863f4d2fbaee0a115cf044f` preserves the complete 12-path owned binary patch and all 12 unrelated current-master paths, including managed Cloud sandbox changes. A verified semantic base resolves squash-ancestry conflicts; both normal parents and the exact tree are checked. The subsequent index/keyset repair is a deliberate additional change, tested separately; the final patch is not claimed identical to the original 12-file implementation. No force push or rebase occurs. - The same 74 pre-index cases passed on the earlier prepared and actual landed parents. The new query-cost regression failed before its repair, then passes on the repaired source. Earlier 57-case and broad acceptance retain their original revision scopes; repeated cases are not added to the current count. The audit-only follow-up leaves all owned server source/test hashes unchanged. - [The owner audit](https://github.com/paperclipai/paperclip/blob/a1d16f84b3fae361d5d648670a5964486370c3a3/doc/plans/2026-10-25-interaction-continuation-sleep-audit.md#acceptance-on-the-actual-landed-terminal-confirmation-parent) retains the original missing-signal regression, the skipped standalone publication suite, and the review's stop-before-send failures with their corrections. Skips and earlier failing revisions are not relabelled as current passes. - Fresh exact-head CI and Greptile 5/5 without unresolved actionable findings remain required. The former remote head's reviews are stale. No full local repository suite, live provider or deployed sleep result is claimed. ## Risks - Process-local transaction hints cover supported application writers and shared pools. Independent SQL writers and other replicas do not gain a new wake guarantee. - The publication queue's existing FIFO, capacity, retry/ambiguity and authorization contracts still govern effects. In-flight provider requests can settle after Stop; the fence prevents a subsequent request from starting. - Missing a supported producer can defer recovery until another change or startup. Producer and rollback tests cover this slice's supported paths. - Worker quiet is separate from host/database suspension. External alarm coverage and Cloud sleep gates are unchanged. ## Model Used OpenAI Codex, using repository inspection, code execution and real PostgreSQL tests. The exact model identifier and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-28 15:45:18 -05:00
DottaandPaperclip	743698e700	fix(runner): preserve OpenCode bash process exit codes (#18076 ) ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Native Runner stores structured tool events so people can inspect actual work. > - OpenCode puts a completed bash command's process exit in `state.metadata.exit`. > - The canonical event mapper only read `state.exit`, so a real nonzero exit became unknown. > - This pull request preserves the documented builtin bash exit and rejects conflicting evidence. > - The benefit is an accurate process exit without changing tool completion or native run status. ## Linked Issues or Issue Description What happened? A completed OpenCode bash part with `state.metadata.exit: 37` produced `exitCode: null`. The process result was present, but the canonical tool event lost it. The pinned upstream [shell result](https://github.com/anomalyco/opencode/blob/v1.18.34/packages/opencode/src/tool/shell.ts#L544-L552) and [completed part](https://github.com/anomalyco/opencode/blob/v1.18.34/packages/opencode/src/session/processor.ts#L160-L170) establish the field path. Expected behavior The canonical event retains the numeric process exit from a completed builtin bash part. A completed tool call can have a nonzero command exit. Missing or invalid evidence must not become a successful command. Steps to reproduce 1. Pass a `type: "tool"`, `tool: "bash"` part with completed state and numeric `metadata.exit` to `canonicalProviderEventsFromOpenCodePart`. 2. Inspect `tool.execution.completed.payload.exitCode`. 3. Before this fix, the value is null. After this fix, it matches the process exit. Paperclip version or commit Reproduced on master `f4f02880cae4f5fa54d47d39565ca99b6b72446d`. Duplicate searches found no matching fix. Related PR #15715 concerns OpenCode V2 transport and version support; it does not change this mapper. ## What Changed - Read numeric metadata exits only from completed builtin bash parts. - Keep legacy numeric top-level exits. Return unknown when supplied legacy evidence conflicts. - Cover zero and nonzero exits, invalid values, foreign tools, incomplete calls and conflicting receipts. - Document the run-log field and the distinction between tool completion and command success. ## Verification - The regression suite first failed five assertions on the unchanged mapper. All 53 provider-event tests now pass. - A focused no-emit TypeScript check covers the changed mapper, its tests and imported protocol validators. - Tests use synthetic structured parts and real protocol validation. No local database, provider, SDK build or live scenario was run. - All 48 jobs in the normal PR workflow passed, including the required `ci / verify` and `ci / e2e` gates. CI also executed all 53 provider-event tests. - Greptile reviewed this exact head at 5/5 with no actionable findings. The separate hosted quality-gate review also completed successfully. ## Risks - Conflicting legacy and metadata exits now remain unknown for completed builtin bash calls. This avoids selecting one inconsistent value as proof. - Other tools retain their existing legacy behavior. Output prose never supplies an exit code. - The change adds no schema field and changes no provider version, budget, accounting, fixture or native run outcome. ## Model Used OpenAI `gpt-6.1-sol` through Codex, with reasoning and terminal tools. The session does not expose the context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-28 15:11:22 -05:00
DottaandPaperclip	ee67d2ece9	fix(server): wake terminal confirmation recovery from committed changes (#17651 ) <!-- entire-trail-link-start --> https://entire.com/gh/paperclipai/-/trails/202/changes/paperclip/202 <!-- entire-trail-link-end --> ## Thinking Path > - Paperclip persists confirmation clicks and interaction decisions before dispatch completes. > - A crash after a decision commits can leave a processing confirmation action. > - Periodic publication maintenance repeatedly scans those actions even when idle. > - Saved decisions and the supported board/admin writers already identify when settlement can change. > - This owner reconstructs durable actions, reconciles real changes and then becomes quiet. ## Linked Issues or Issue Description This existing terminal-confirmation slice follows merged #17649. It removes only terminal-confirmation recovery from periodic chat maintenance while retaining the explicit manual API and existing durable action/interaction/publication rows. Problem: An accepted response can commit before its dispatch settles. Removing periodic recovery without covering board decisions, expiry and ownership changes would strand processing actions. Pending human decisions must remain recoverable without polling indefinitely. Expected behavior: Committed supported changes wake the scoped owner. It reconciles terminal responses once, parks unresolved human decisions, preserves concurrent commits/restart/drain and becomes quiet when settled. ## What Changed - Register terminal-confirmation work with the existing delivery coordinator and scoped lifecycle. Reconstruct processing action IDs, bound selection pages, preserve concurrent wakes and keep current authorization in the existing interaction owner. - Add the existing transaction-aware confirmation notification topic at real resolution writes and callback settlement. Reuse milestone signals instead of adding per-caller recovery wrappers. - Cover ordinary and checkbox confirmations, suggestions and connection intents through their owning service. Cover board accept/reject, cancellation/withdrawal, opt-in comment supersession, expiry, reassignment and already-satisfied connection resolution. - Preserve task/actor authority, one-use callback tokens and immutable provider publication semantics. Explicitly fail malformed missing bindings instead of silently retaining unrecoverable processing actions. - Remove only this duty from recurring publication maintenance. Add no table or scheduler infrastructure. A concurrent partial index on existing action rows prevents recovery discovery from scanning completed history. ## Verification Published repair head: `a35e78d076c1b618bc643391b7520fa6952fc996`, targeting master after normal integration of `644937c93150c423f12674992c7ea1e8b5dbc98c`. [Detailed acceptance and preserved failures](https://github.com/paperclipai/paperclip/blob/a35e78d076c1b618bc643391b7520fa6952fc996/doc/plans/2026-10-25-terminal-confirmation-sleep-audit.md#bound-retained-history-reads--october-28-review-repair). - New query-cost regression: Capture the actual SQL emitted by startup and company-scoped confirmation discovery. Seed 20,000 completed/unrelated action rows and one pending human decision. Before the index, the regression fails because recovery examines 20,009 action rows. After the partial index, startup and scoped discovery must examine at most two action rows and fewer than 20 table/index buffers; the no-pending scoped path must also stay below 20 buffers. Planner settings are unchanged, and returned IDs remain correct. - Match startup keyset ordering to `(company_id, id)`, the partial index order. The index alone still let PostgreSQL choose the primary key and scan 20,206 rows for `ORDER BY id`; the final query fixes this without forcing a planner setting or adding a second index. Fixed kind/status predicates stay literal for prepared-plan index eligibility. - Add the generated `0398_yielding_random.sql` migration, using `CREATE INDEX CONCURRENTLY IF NOT EXISTS` and the existing top-level migration runner. Keep the five newest generated snapshots and preserve every prior SQL/journal entry. No work table is introduced. - 110 distinct cases pass: 17 final confirmation lifecycle/query-cost cases (1,671 skipped), seven real Runner descriptor variants (295 skipped), and all 86 app/startup/bundled-plugin/plugin-database cases. Server/database typechecking and builds, migration safety/numbering, module boundaries and a fresh PostgreSQL migration through 0398 pass. The final test-only vacuum precondition is followed by another 17-case confirmation pass and server typecheck. Counts are not added across repeated runs. Normal integration of master `644937c93150c423f12674992c7ea1e8b5dbc98c` preserves the complete owned patch and all 18 unrelated master paths. - Previous landed-parent acceptance: 29 distinct cases (16 confirmation lifecycle/producer cases with 1,671 skipped, plus all 13 startup cases) passed on `32e64a7e9ea5b457e54ca7b268be90e1e155b451`; the earlier 80-case matrix remains scoped to `c1e8542b588a4fa59b62f9829541d3daea4f1ddc`. Counts are not added across repeated runs. - Actual producer cases prove parking/quiet, caller-owned outer transaction rollback, commit-driven automatic settlement, restart/drain and concurrent commits. Checkbox, suggestion, connection-intent and Telegram/Slack callback paths retain existing authority and immutable publication semantics. - Fresh exact-head CI and Greptile 5/5 with no unresolved actionable findings are required. The preceding head's Runner CI failed its timeout-attachment durable-suspension case (1 failed/1,955 passed/4 skipped); that failure is retained and not counted as a pass. The new head must pass this job. No full local repository, live provider or physical suspension claim is made. The owner audit retains the earlier missing-board-producer regressions and their corrections, including the invalid supersession fixture that assumed a new checkbox expires an older one. Existing behavior was preserved by using the supported opt-in human-comment path. Prior scheduler/backoff, route and plugin test failures remain at their original revisions; no old pass is substituted for current remote gates. ## Risks - Process-local notifications cover supported application writers and their shared pools, not independent SQL writers or other replicas. - Processing actions waiting on a human response are deliberately parked. Supported interaction resolution/expiry writers must use the notification boundary; a missing producer delays settlement until restart. - Invalid bindings have explicit failure evidence. Source, actor, task and publication authority remain checked by their existing owners. - Following continuation/GitHub duties remain separate. Cloud sleep gates and external alarms are unchanged; local worker quiet does not establish physical host/database suspension or fleet savings. ## Model Used OpenAI GPT-6 / Codex, with reasoning, repository inspection, code execution, and PostgreSQL tests. The exact runtime model identifier and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-28 15:00:31 -05:00
MichielMAnalyticsandClaude Opus 5.5	644937c931	feat(sandbox-providers): add boxd sandbox provider (#17284 ) <p align="center"> <img src="https://raw.githubusercontent.com/MichielMAnalytics/paperclip/08f1cdda04443ed10fc43e7097ae0b2d14b5cc19/boxd-x-paperclip.png" alt="boxd × Paperclip" width="700"> </p> ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Agent work runs in sandboxes that provider plugins supply > - An operator selects a provider for each environment, and a reused lease keeps one sandbox for an issue across heartbeats > - The time to resume a reused sandbox delays every heartbeat on that issue (see #14684) > - boxd runs each sandbox as an isolated microVM that suspends and resumes in milliseconds, with disk, memory and processes kept > - This pull request adds a boxd sandbox provider plugin > - The benefit is that operators get one more provider, with fast resume for reused leases ## Linked Issues or Issue Description Refs #14684. That pull request keys the remote session identity on the provider lease ID. This provider keeps the provider lease ID equal to the boxd machine ID, so the ID stays the same across suspend and resume. No issue exists for boxd. The request is described below with the fields of `adapter_request.yml`. Agent or provider boxd (https://boxd.sh). boxd runs each sandbox as a KVM microVM. The plugin uses the public TypeScript SDK, `@boxd-sh/sdk` 0.2.20 or later. Why this adapter is useful boxd suspends a machine in about 17 ms and resumes it in about 0.2 s, with the disk, the memory and the running processes kept. This fits `reuseLease`: the next heartbeat on an issue continues on the same machine. Each machine is created with `isolated: true`. An isolated machine has no metadata endpoint, no in-VM `boxd` CLI and no boxd integrations, so sandbox code cannot reach the provider management interface. How the agent is invoked Build and install the plugin by local path, as the package README describes. Open Instance Settings, then Environments. Select the `boxd` provider and supply a boxd API key. Agents that use the environment run their adapter commands in a boxd machine. Are you willing to implement it? Yes. This pull request is the implementation. ## What Changed - Adds the `boxd` sandbox provider under `packages/plugins/sandbox-providers/boxd`. Its structure follows the E2B and exe.dev plugins. The plugin has no code comments, to follow `CONTRIBUTING.md`. - Implements the validate, probe, acquire, resume, release, stop, destroy, inspect, realize-workspace and execute hooks. The manifest declares `sandboxCapabilities: { reusableLeases: true }`. - With `reuseLease`, release suspends the machine and resume wakes it. A suspended, hibernated or stopped machine is woken by the matching boxd call. A release that cancels active work stops the machine and keeps its disk. - Release and destroy return a `destroyed` receipt only after boxd no longer lists the machine. Stop returns a `stopped` receipt only after boxd reports the `stopped` state. - When the host sets `requestedExpiresAt`, the plugin sets a boxd delete timer at or before that time and returns `expiresAt` on the lease. The timer is set after the create call returns, so a failure while setting it cannot lose the machine ID. - Commands run through `sh` with quoted arguments and per-command environment. Stdin is staged with boxd's file API in a temporary file that only the machine user can read, and removed afterwards; the workspace directory is created the same way. A machine whose boxd agent predates that API, such as one restored from an older snapshot, falls back to the older upload and `mkdir` calls. A command timeout ends the remote process group and returns `timedOut: true`. A command on a stopped machine starts the machine and runs one more time. - A failed acquisition deletes its machine. If boxd cannot confirm the deletion, the plugin throws `PluginEnvironmentCreationCleanupError` with the machine ID, so the host records it and retries the teardown; the destroy hook checks the account and the machine labels before it deletes a failed creation. A probe whose machine cannot be deleted reports a failure, and probe machines carry a 15-minute boxd delete timer. - The plugin keeps one SDK client for each API key. This prevents a session token exchange for each command. - Machines carry the labels `paperclip-provider`, `paperclip-environment` and `paperclip-run`, so an operator can find them with `boxd machine list --label paperclip-provider=boxd`. - Registers the optional bundled catalog key `boxd` and the trusted `BOXD_API_KEY` host fallback, with tests that mirror the CreateOS cases. - Adds the package to the release manifest with `publishFromCi: false` until a maintainer bootstraps the first npm publish. - Adds unit tests with a mocked SDK (40 tests) and opt-in live tests (`BOXD_LIVE_TEST=1`, 9 tests) that run every hook against boxd. - Adds a section to `doc/plugins/PLUGIN_AUTHORING_GUIDE.md` and adds boxd to the README provider list. ## Verification Provider package (`packages/plugins/sandbox-providers/boxd`): - `pnpm install --ignore-workspace --no-lockfile && pnpm typecheck`: passes. - `pnpm test`: 40 passed, 9 live tests skipped. - `BOXD_LIVE_TEST=1 BOXD_API_KEY=... pnpm test`: 49 passed against production boxd on 2026-10-28 with `@boxd-sh/sdk` 0.2.20. The live tests cover: - validation, and a probe at 2 vCPU that deletes its machine (a bad key returns a failed probe); - the labels, the isolation and the org of an acquired machine; - stdin, env, argument quoting, the exit code and stderr, and the removal of the staged stdin file; - an empty stdin, and a staged stdin file that only the machine user can read (mode 600); - a 5 MiB round trip through the base64-over-exec path (the SHA-256 matches); - a command timeout, which returns `timedOut` and ends the remote processes; - suspend and resume (a file and a running process stay), stop and resume (the file stays), and inspect in each state; - a command on a stopped machine, which starts the machine and runs; - resume and stop of a hibernated machine, stop of a suspended machine, and release with `cancelActiveWork` and with `stop_and_retain`; - release without reuse, which deletes the machine; - a `requestedExpiresAt` 45 s away, which boxd enforces by deleting the machine; - a run restored from a snapshot, and a fresh machine at 2 vCPU / 8 GiB; - resume after destroy, which returns an expired lease, and a final check that no test machines remain. - Measured times: probe 1.5 s, acquire 1.4 s, release with suspend 17 ms, resume from suspend 0.13 s, resume from hibernate 0.18 s, stop 14 ms, resume from stop 3.2 s, acquire from snapshot 1.6 s, confirmed destroy 30 ms. - On a machine started before boxd's file API (the test host), the plugin's hooks fell back to the older calls: the workspace was created, stdin was staged (mode 644, the upload path), an empty stdin worked, and no staged file was left. Host: - `npx vitest run src/__tests__/bundled-plugins.test.ts src/__tests__/plugin-database.test.ts` in `server`: 73 passed, 6 of them new (re-run on 2026-10-28). - `npx vitest run src/__tests__/cli-invocation-safety.test.ts` in `server`: 40 passed. The README install commands now use the direct-exec CLI form. - `npx tsc --noEmit` in `server`: passes. - `node --test scripts/release-package-map.test.mjs scripts/check-release-package-bootstrap.test.mjs`: 18 passed. Full stack, on a Linux host with `pnpm dev:once` in `local_trusted` mode: - I installed the plugin with `POST /api/plugins/install` and a local path, then created boxd environments with a secret reference for the API key. - Ephemeral environment: the environment probe passed. A `claude_local` agent (`claude-sonnet-5-5`, legacy runner) ran a task in a boxd machine. It reported Ubuntu 24.04.5 and the workspace `/home/boxd/paperclip-workspace`, and it marked the task done. The lease was released and the machine was deleted. - Reused-lease environment: the first run wrote a file and started a background loop. After release, the machine was in the `suspended` state. A comment with `reopen: true` started a second run. That run used the same machine, so the provider lease ID was the same on both lease rows. The file was there and the background loop was still running. - Validation: a config with `vcpu: 3`, and a config with both `vcpu` and `snapshot`, return 422 with the plugin error. The unsaved-config probe (`/environments/probe-config`) passed in 2.0 s and deleted its machine. A saved probe with `vcpu: 4` created a 4 vCPU / 16 GiB isolated machine. - Cancel: cancelling the first run on a reused lease marked the lease `expired`, and the host destroyed the machine through the plugin about 12 s later. - Delete: deleting an environment that holds a reused lease returns 409. With `?destroyReusableSandboxLeases=true` it returns 200, and the host destroys the suspended machine through the plugin. - I re-ran this flow on 2026-10-26 and again on 2026-10-28 with `@boxd-sh/sdk` 0.2.20, from a script, with each step checked. On 2026-10-28 the ephemeral run posted its proof and both of its machines were deleted. The reused-lease follow-up ran on the same machine (both lease rows have the same provider lease ID), and found the file and a background loop that had kept running. The validation errors returned 422, the unsaved-config probe passed in 1.8 s, and deleting the environments left no machines. Every check passed except the host gap below. - After the runs, `boxd machine list` showed no machines with the test prefix. Not run: `pnpm -r typecheck`, `pnpm test:run` and `pnpm build` at the root. The test host has no Rust toolchain for the runner binary. On that host, `scripts/check-forbidden-tokens.mjs` adds the local username (`boxd`) as a token. It then flags every `boxd` substring, and it also fails on `master` there (`InboxDismissal`). A CI runner uses a different username. ## Risks - Host gap, not in this plugin: when a run that resumed a reused lease is cancelled, the host marks the run `cancelled` but does not stop the agent in the sandbox. The adapter keeps polling the file bridge, and the host calls no release, stop or destroy hook. The lease stays `active` until the environment is deleted. A plugin-side trace showed only bridge-polling `execute` calls after the cancel. boxd is the only provider that declares `reusableLeases`, so this path may not have been exercised before. A cancel on the first run of a lease works as expected. - Low risk to existing behavior. The plugin is opt-in and is not installed by default. The host changes add one catalog entry, one credential passthrough entry and their tests. - boxd machine creation has no idempotency key. If a create response is lost, a machine can stay behind. The labels above help an operator find it. - A suspended machine keeps its memory image until boxd hibernates it after a period of idle time. An operator who keeps many reused leases pays for that storage. - boxd stops a non-PTY command that has no output for 30 minutes. Agent CLIs write output during a run, so this does not affect normal runs. - boxd has one region (EU), amd64 machines only, and no GPUs. Machine sizes are 1/4 GB, 2/8 GB, 4/16 GB and 8/32 GB. - The new `package.json` needs code-owner approval. ## Model Used - Claude Opus 5.5 (`claude-opus-5-5`) through Claude Code, with tool use and shell execution on a boxd machine. The session does not expose the context window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass (focused checks; the limits are listed under Verification) - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) https://claude.ai/code/session_01HNWtBYxLByQmmNKjuaou1P --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>	2026-10-28 12:34:21 -07:00
DottaandPaperclip	c4b6168e08	fix(server): disclose assigned tool search page bounds (#18056 ) <!-- entire-trail-link-start --> https://entire.com/gh/paperclipai/-/trails/187/changes/paperclip/187 <!-- entire-trail-link-end --> ## Thinking Path > - Paperclip is the control plane for AI agents at work. > - Native agents find connected app tools through the assigned-tool search tool. > - Large catalogs require small pages and an offset for the next page. > - The input schema enforces a maximum of 20 results, but its descriptions omit that number. > - Providers can render the integer field as a plain number and hide its numeric bounds. > - This pull request puts the existing range and default in both descriptions. > - Agents can choose a valid page size before they make a search call. ## Linked Issues or Issue Description What happened? An agent can request `limit: 50` for `paperclip_search_assigned_tools`. The tool rejects the call with `invalid_tool_call` at `/properties/limit/maximum`. Its model-visible description does not state the accepted range. Expected behavior The tool description and the `limit` description must state the range of 1 to 20 and the default of 5. Agents can use `nextOffset` to read more results. Steps to reproduce 1. Inspect the assigned-tool search description in a provider tool list. 2. Render the integer schema as a TypeScript number field. 3. Request `limit: 50` without a visible page-size bound. 4. Observe the validation error. Retry with a valid size and offset. ### Hypothesis and thesis for a fix The numeric schema is correct, but the descriptions omit the page limit. Put the existing range and default in text that all providers can see. Keep the strict validation in the assigned-tool discovery owner. This should reduce avoidable retries. It does not guarantee that every model call will be valid. ## What Changed - State the accepted range and default in the search description and the `limit` property. Add the existing default as schema metadata. - Test the tool listing and calls through the real HTTP MCP bridge for both compact delivery paths. - Document the page size and offset procedure in the Runner README and verification maps. ## Verification - Red: the two new bridge tests fail against the unchanged implementation because the listing omits the numeric guidance. - Green: all 37 tests in `server/src/services/native-runtime/assigned-mcp-tools.test.ts` pass after the change. The tests cover default pages, a 20-result page, offset continuation without duplicates, and rejection of 21 and 50. Existing tests cover grants, revocation, modes, approvals, aliases, and schema chunks. - Current head `7d658d0c4e4d9db3feb53a5c508214440ff058c4`: 37/37 focused tests pass locally. Greptile is 5/5 with no unresolved threads. Current-head CI is green, including typecheck, build, unit tests, Runner checks, and all browser shards ([CI run, attempt 2](https://github.com/paperclipai/paperclip/actions/runs/40733284523/attempts/2)). Browser shard 7 initially failed in a newly merged agent YAML editor test when its clipboard read included the whole page. The single retry passed without a code change; the exact cause is unconfirmed. The original failure remains in [the CI log](https://github.com/paperclipai/paperclip/actions/runs/40733284523/job/122975224906). - Run the focused suite from `server/`: `pnpm exec vitest run src/services/native-runtime/assigned-mcp-tools.test.ts`. - `node scripts/check-maps.mjs` and `git diff --check` pass. - The bridge uses real local HTTP. The app gateway uses synthetic descriptors. No deployed build or live model improvement is claimed. - Full local verification is incomplete. Recursive typecheck and server typecheck require `cargo`, which this workspace lacks. A direct server TypeScript check was killed by the workspace. The full test suite had no final verdict before the resource stop. CI must supply the remaining verification. ## Risks Low risk. This change describes existing limits and adds default metadata. It does not change search execution, page caps, gateway access, revocation, approvals, or audit. Models can still send invalid calls. This change has not measured their future retry rate. ## Model Used OpenAI Codex, GPT-6 family, with tool use and code execution. The exact provider model ID and context window are not exposed to this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used, its capabilities, and unavailable model metadata - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs - [x] I have described the issue in-PR following the bug report fields - [x] I have not referenced internal or instance-local Paperclip issues or links - [x] The public branch name describes the change and has no internal task ID - [x] I have run the focused tests locally and they pass - [x] I have added tests for the reported failure - [x] I have updated relevant documentation - [x] I have considered and documented risks - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open recommendations or follow-ups - [x] I will address reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-28 13:55:48 -05:00
DottaandPaperclip	b14e1ecaf8	feat: add a complete agent YAML configuration editor (#18036 ) <!-- entire-trail-link-start --> https://entire.com/gh/paperclipai/-/trails/175/changes/paperclip/175 <!-- entire-trail-link-end --> ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Operators configure each agent through several settings tabs. > - Operators also need one complete, editable configuration document. > - The document must retain each resource service's access and validation rules. > - This pull request defines the `paperclip/v1` Agent YAML format and adds an Advanced editor. > - The editor previews changes, rejects stale core writes, and explains partial saves. > - Operators can edit agent settings in one place and verify the saved state after reload. ## Linked Issues or Issue Description Refs #2219. Related settings work: #10974. Problem or motivation Agent configuration spans profile, runtime, instructions, skills, tools, channels, permissions, secrets, keys, and revision history. Operators cannot inspect and edit those settings as one versioned YAML document. Proposed solution Add an Advanced agent tab with a YAML editor. Define a shared document schema. Read and write resources through their existing APIs. Separate editable settings, explicit commands, and read-only observed state. Alternatives considered A raw agent-row editor would omit related resources. A generic database update would bypass resource ownership. The editor therefore uses the existing resource contracts and records partial results when a later request fails. Roadmap alignment This extends the shipped agent configuration capability. It relates to easy AGENTS.md configuration, multi-harness teams, governed tool access, and secrets management. Stored credentials remain redacted. This format is an editable settings view; it does not add company portability or provider consent. ## What Changed - Add the `paperclip/v1` Agent document schema and format documentation. - Add the Advanced route, sidebar entry, YAML editor, validation, change summary, save progress, and reload recovery. - Cover core settings, instruction files, skill pins, tool installs/profiles/policies, channels, permissions, secret operations, API keys, and revision restore. - Add private-keyed configuration revisions checked under the agent write lock. Read the current key through its owner so file-based rotation does not require restarting the server. Preserve unchanged secret markers at their original paths. - Retain drafts and returned credentials after partial saves. Require reload before retrying commands. Prevent duplicate submissions. Keep new key tokens visible through rename and disable saves with an empty change plan. - Send only changed channel settings. Require explicit intent for shared profile edits. Load destination instruction files when changing their location. - Update Storybook fixtures, verification maps, and regression tests. Add browser acceptance through real APIs and PostgreSQL. ## Verification - `pnpm -r typecheck` passes. - `pnpm build` passes. - The focused UI suite passes all 50 tests. The API/revision helper suites pass all 93 tests. - All 65 lifecycle tests pass with a dedicated PostgreSQL database. They exercise real row locks, redaction, revision history, audit, and company access. - All six browser acceptance cases pass. They check saved settings and clears, secret redaction, key creation/revocation, stale drafts, lost-response recovery, instruction relocation, revision restore, and key-token retention through rename. The tests use real resource APIs and storage. The MCP target uses the existing local provider fixture. No model run or provider login is claimed. - Signing-key regressions cover both environment changes and real in-place key-file rotation. The protected database save/fencing cases pass after removing the cache. A local measurement of 1,000 file-backed revision calculations took 48 ms. - `pnpm check:token-gates`, `node scripts/check-maps.mjs`, and Storybook catalog checks pass. - The full [PR CI run](https://github.com/paperclipai/paperclip/actions/runs/40725425470) passes on `34ed97bbf9`: all 48 jobs, including all eight browser shards. Greptile is 5/5 on this commit, with no unresolved review threads. This final commit refreshes CI after a runner-routing fallback; its source tree matches `fb4cf488cf`. - Paperclip Review and Superagent Security Scan ended neutral because their external agents did not complete a valid assessment/receipt. Superagent passed on `fb4cf488cf`, which has the identical source tree. One request to retry the final scan returned HTTP 404. Neither check reports a code finding. - The local full-suite attempt was blocked by host System V semaphore exhaustion. Acceptance and lifecycle verification used an isolated PostgreSQL 18 container. Earlier CI runners were interrupted. A local combined run hit hook/test timeouts; the full 88-test route file passed after the builds finished. The final full CI run passes. Earlier failure logs and browser traces remain retained outside the repository. To run the browser regression: ```sh pnpm exec playwright test --config tests/e2e/playwright.config.ts tests/e2e/agent-configuration.spec.ts ``` ## Risks - Multi-resource saves are sequential. Earlier operations can remain saved if a later operation fails. The editor reports the completed steps and requires reload. - Core settings and managed instruction files have atomic revision/hash checks. Other unversioned resource writes and external supporting files retain a race window after preflight. - Shared profile definitions affect other bindings. The editor requires `updateSharedDefinition: true` for those edits. - The editor follows native service normalization and experimental settings. Canonical reload can add generated access profiles or mask environment values. - New editor dependencies require the repository's normal automated lockfile update. This pull request does not edit the lockfile or add a database migration. ## Model Used OpenAI Codex, GPT-6 family. The exact current model version was not exposed. The work used reasoning, repository tools, code execution, and browser automation. Earlier work in this chat used the configured Codex model before a model switch; its exact model ID and context window were not exposed. The current context window size is also not exposed. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-28 11:49:24 -05:00
DottaandPaperclip	4808a3a2b1	fix(heartbeat): retry operator Stop after a transaction deadlock (#17895 ) <!-- entire-trail-link-start --> https://entire.com/gh/paperclipai/-/trails/69/changes/paperclip/69 <!-- entire-trail-link-end --> ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Operator Stop must revoke task authority before it stops provider execution. > - Its transaction locks the task and then the run. A concurrent writer can hold the run while it waits for the task. > - PostgreSQL can abort the Stop transaction with a confirmed deadlock. The cancel API then returns 500. > - This pull request retries only that aborted database transaction, at most three times. > - Provider Stop and activity publication stay after commit, so the retry cannot repeat those effects. ## Linked Issues or Issue Description Refs #17639. Its agent-chat project browser test completed the product assertions, then failed during cleanup when the cancel API returned 500. A real PostgreSQL lock-cycle test reproduces the same `40P01` error in the Stop transaction. Related: #13911 addresses audit foreign-key lock contention. This change handles a different concurrent run-writer path without changing the schema or task/run lock order. Stack base: #17639. This is a separate correctness repair for the sleep migration stack, not another polling migration. ## What Changed - Control the runner timeout regression fixture's clock so it reaches the pending append before expiry; retain production cancellation and late-append assertions. - Retry the Stop authority transaction only after PostgreSQL reports `40P01`. Make at most three attempts, with short bounded backoff. - Discard rolled-back local run state, claim flags, and queued activity publications before each retry. Re-read current authority under fresh locks. - Keep provider cancellation and activity publication outside the retried transaction. Preserve other errors and the existing native lock-conflict response. - Add a real two-transaction deadlock test. Add server-side failure tests for retry exhaustion and errors that must not retry. - Let run-control tests use a validated disposable PostgreSQL database URL. ## Verification Published head: `60ba892ae9fc5faaf8cd0833694b4a66c13323c3`, targeting master after #17639 merged at `1ed0af41867ba40fd1d23292d395588d18c2fcbe`. The normal ancestry merge preserves the complete five-path tested cancellation patch byte-for-byte, including the review repair, and all four unrelated current master paths. The production retry logic remains unchanged from this slice's reviewed implementation; the follow-up adds coverage and its audit. - 228 distinct complete cases pass: all 48 run-control cases and all 180 native-session runtime cases. The two new targeted cases are included in 48 and are not counted again. Server typechecking, build and module-boundary checks also pass. - The new real PostgreSQL cases reach a failed native run's correlated Stop claim, cancellation fence, board handoff retirement and activity write before raising `40P01`. One case preserves retry authority and commits exactly one cancellation activity/live notice. The other changes coordinator authority between attempts, returns 409, preserves the failed run and handoff, and performs no provider/workspace cleanup. - A negative control removes only the publication-list reset. It fails with two live notices for one durable activity. Production was restored byte-for-byte before final validation. The existing actual two-connection deadlock, bounded attempts, non-deadlock rejection and post-commit provider behavior remain covered. - Preserve the initial new-assertion typecheck failure (optional live-event payload) and the corrected final pass. Service-local test files are typechecked; `src/__tests__` is excluded. The negative-control harness initially expected an untruncated Vitest assertion line; the actual named 1-versus-2 failure and restoration were inspected before correcting its result matcher. - [Current-parent acceptance and failure ledger](https://github.com/paperclipai/paperclip/blob/60ba892ae9fc5faaf8cd0833694b4a66c13323c3/doc/plans/2026-10-28-cancellation-deadlock-acceptance.md) records current scope, commands, isolated fixtures, mutation evidence and limits. Earlier combined-stack counts retain their original revision scope. The existing controlled runner timeout/late-append fixture is retained and passes within the complete 180-case runtime suite. - This addresses the prior Ponytail request to exercise native claimed state before deadlock rollback and re-evaluate authority afterward. The advisory loop-invariant snapshot/named-attempt-bound note remains a maintainability suggestion, not a runtime defect. No production loop refactor or new worker duty is introduced. - All 58 current checks are clean; Greptile and Ponytail both rate this exact head 5/5. Ponytail explicitly confirms that the native-claim coverage request is resolved and says Ship. The formerly queued dependency/quality review workflow has completed successfully. Old `fffc`/parent checks and reviews are not current passes; the former pending Snyk status is not called successful. Actual failing Ponytail findings must be fixed. Missing/stopped/paused turns without a verdict are authorized nonblockers. Active unfinished reviews retain their original per-head timer, with a 25-minute monitor cutoff respecting the 30-minute maximum. - No full local repository matrix, live provider execution, external alarm, physical host/database suspension or savings claim is made. No schema, dependency, workflow, shared scheduler contract or shared OS resource changes are introduced. ## Risks - Persistent contention still returns an error after the third attempt. This change does not promise to eliminate every possible lock cycle. - Retrying a write after an ambiguous connection failure would be unsafe. The retry accepts only PostgreSQL's confirmed deadlock abort code; it does not accept transport errors. - No schema or public API contract changes. Current task/run authority and cancellation eligibility are checked again on each attempt. ## Model Used OpenAI GPT-6 via Codex, with shell, GitHub CLI, TypeScript, PostgreSQL, and Playwright tools. The exact serving model ID and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-28 11:46:58 -05:00
DottaandPaperclip	4f8104dec6	fix(runner): keep human input tool visible to Claude (#18046 ) ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Native task agents must create durable human questions and approvals. > - The request_human_input schema has an object root with a conditional wrapped in allOf. > - The pinned Claude client omits that tool from the API request in an isolated gateway environment. > - An equivalent direct conditional keeps the tool available and preserves validation. > - This pull request fixes the schema and tests discovery through the real pinned client. ## Linked Issues or Issue Description What happened? A retained native Claude Plan attempt could save its Plan but received `No such tool available: mcp__paperclip__request_human_input`. A local comparison with Claude Code 2.1.286 reproduces the discovery failure without a provider: the client offers the control tool but omits the human-input tool. It offers both tools after this schema change. Expected behavior The client must offer the authorized human-input tool. Invalid question forms must still fail validation. Steps to reproduce 1. Serve the current request_human_input definition through Runner's local MCP bridge. 2. Start the pinned Claude client with a local mock Messages API and tool search disabled. 3. Inspect the API request's offered tools. Before the fix, request_human_input is absent. After the fix, it is present. Refs #18034 for the separate saved-Plan readback repair. This PR addresses tool discovery. It does not reclassify or rerun the original failed live attempts. ## What Changed - Put the existing question-payload condition directly on the live and scenario object schemas. A one-branch allOf wrapper is unnecessary. - Add a regression through the pinned native Claude executable, real Runner MCP bridge and loopback mock API. The test uses fake credentials and executes no tools. - Keep validation tests for mixed forms and malformed payloads. Add an explicit missing-payload rejection. - Refresh generated schema identity and the explicitly seeded catalog fixture with the maintained generator. Historical live evidence is unchanged. ## Verification - Native discovery regression red: the control tool is present and request_human_input is absent. - Green: 92 tests pass across native discovery, Runner tool bridge, core contracts and semantic tools. The final argument-visibility regression and core contracts also pass together (21 tests). - Runner package typecheck passes. - Runner package build passes. Its first run found stale generated contract identities; regeneration resolved that check. Both logs are retained. - No real provider request, paid eval, sandbox allocation or automatic retry. - Local verification is scoped to the Runner package. Full repository CI must pass on this PR's exact head before merge. New live Plan acceptance is still required. ## Risks - The conditional has the same JSON Schema validation meaning. The provider-facing object shape changes, so the generated catalog identity changes. - The native regression uses the optional platform CLI already required by the pinned ACP profile. It does not establish provider billing, model behavior, or full Plan acceptance. - Optional case/workflow tool discovery is a separate confirmed gap tracked in #18051. This human-input fix does not qualify those tools. - No database migration, permission, budget, workflow, lockfile or UI change. ## Model Used - OpenAI Codex, GPT-6, with reasoning and code execution tools. The exact serving variant and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-28 11:30:15 -05:00
DottaandPaperclip	567c043b17	feat(server): expose bounded hot-upgrade readiness (#18037 ) ## Thinking Path > - Paperclip coordinates agent work and keeps its authority in the server. > - Remote native runners can preserve execution through a server replacement. > - Deployment operators need evidence that current runs support that recovery. > - Process-local drain counters do not establish this fact. > - This PR adds an optional, operator-only readiness observation from existing records. > - A deployment consumer can use that report while the existing runtime retains recovery authority. ## Linked Issues or Issue Description Refs #17439. What happened? A deployment cannot distinguish recoverable remote native executions from runs that require a task drain. The existing status endpoint reports only process-local counts. Expected behavior An instance operator can request a bounded readiness report without stopping admission or exposing checkpoint material. Missing ownership or persistence evidence must prevent readiness. Ordinary status reads must keep their current cost. Steps to reproduce Run a remote native task. Read the task-drain status. It reports active work but supplies no recovery eligibility. Deployment code therefore has no affirmative signal to select an active-run handover. ## What Changed - Add `GET /api/instance/task-drain?upgradeReadiness=1` for instance administrators and existing Cloud control callers. - Return aggregate eligibility from current run identities, controller leases and bound opaque checkpoint headers. Unknown work, pending admission and incomplete reads prevent a positive report. - Bound the explicit read to 1,001 rows, encrypted headers of at most 256 KiB each and 8 MiB total, and a two-second SQL statement timeout in a read-only transaction. Keep ordinary status reads in memory. - Add PostgreSQL, count-transition and route authorization tests. Update the API contract, operator docs and access maps. ## Verification - All seven readiness cases pass against an isolated PostgreSQL 18 fixture. They cover missing checkpoints, legacy adapters, missing process/session identities, foreign owners, expired leases, missing lease tokens, failure state and in-flight work. The positive SQL fixture uses the real Runner checkpoint writer and encryption. Regular sandbox workspace identity and plugin environment-lease identity are tested with independent IDs. Stopped/released/undispatched plugin tasks and every mismatched identity field are rejected. Local/legacy/malformed/oversized or mismatched headers are rejected. A held PostgreSQL table lock proves the two-second cancellation budget, rollback/connection release and unrelated query responsiveness. - All 123 focused readiness, instance-settings and Cloud control assertion tests pass, including operator-only access and no readiness read on ordinary status requests. Runner’s 168 checkpoint tests pass. Runner and server typechecks pass after review fixes. - Workspace typecheck, full build, module-boundary and map checks passed locally before the master rebase. Current-head GitHub CI is now green, including typecheck, build, all grouped/serialized server and Runner tests, browser shards, policy and review-dispatch checks. Greptile completed cleanly at 5/5 for `f15fb0c7e9dfb975090cd5d791a1c8e6701275f8`; all actionable threads are resolved. - The broad local test run was stopped after the macOS embedded PostgreSQL fixture failed to bootstrap. The SQL test was then run on the isolated PostgreSQL fixture. No assertion or timeout was weakened. One unrelated existing route test exceeded its 15-second limit under concurrent local builds; it passed on one isolated retry and the subsequent whole route suite passed. - Hosted active-run upgrade acceptance has not run. This PR supplies an observation; it does not change rollout policy or establish live continuity by itself. ## Risks This is an instance-wide observation, so company members and agent keys must not receive it. A readiness snapshot can age as work changes; shutdown and startup retain their existing execution authority and fencing. The report does not validate a replacement artifact or authorize a schema migration. It decrypts only bounded headers through the checkpoint owner and delegates format/identity inspection to Runner; full journal restoration and physical sandbox authentication remain with recovery. No migration, recurring query, new checkpoint write or wire protocol change is included. The additive Runner header inspection contract reuses its existing parser. ## Model Used OpenAI Codex, based on GPT-6, with reasoning, source inspection, tool use and code execution. The host does not expose the exact serving model ID or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass for the affected contracts; the broad-run limitation is recorded above - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-28 11:28:15 -05:00
DottaandPaperclip	8049fbf51d	fix(server): schedule voice call reports from saved deadlines (#17586 ) ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Voice calls retain reports and project guest transcripts into intake tasks. > - Chat maintenance repeatedly scans recent calls even when no report is due. > - Empty scans keep the tenant database active. > - Existing session and report rows already contain the work and its deadlines. > - This pull request moves report refresh to the shared coordinator and removes the final voice maintenance lane. > - Idle voice configuration and old call history no longer cause report scans. ## Linked Issues or Issue Description Refs #17583, #17580, #17578, #17576. This is slice 25 of the recurring-server sleep stack. It now follows merged #17583 and targets master. What existing behavior does this improve? Voice call-report refresh and guest transcript projection. Current behavior The chat interval scans terminal calls for reports. It repeats the scan even when there are no eligible calls or all saved deadlines are in the future. Proposed behavior Committed session transitions and signed callbacks wake a scoped worker. Startup reconstructs existing rows. Later refreshes use saved deadlines. The worker becomes quiet after all eligible windows expire. Reason and benefit Stop empty database scans without losing late transcript and billing updates. Keep the existing 24-hour refresh policy, provider response ordering, and guest-task trust restrictions. ## What Changed - Add a voice-owned report worker using the existing scoped deadline helper. No queue table or field is added; the existing session table receives a report-window index. - Save each attempt and its retry before provider I/O. Compare that ownership on settlement so an older response cannot overwrite a later callback or claim. - Preserve available reports when a response is incomplete or stale. Preserve their finite refresh window. - Route voice-change and reply call-ended writes through transaction-aware report signals. - Preserve guest transcript locks and use the observed document revision when updating an existing transcript. - Register the worker in app startup. Remove voice reconciliation from the chat interval. Keep explicit one-shot diagnostics. - Document producer scope, lifecycle behavior, tests, and external wake limits. ## Verification Published head: `758cfe15c3e6283d38ba512c8416ccce4d200862`. The follow-up after `c28de398` changes only two documentation files; the verified production, migration and test source is unchanged. It normally merges landed retention/master `980775e0e956eecdc28c73c9b4aca0407ad45e1a`. The 20 owned paths remain the complete slice, including officially regenerated migration 0397, its snapshot and required pruning of snapshot 0392. The non-database reviewed patch was preserved during ancestry integration; the only subsequent source edit makes one existing report test’s provider responses call-specific. All production report behavior and unrelated master changes are preserved. No shared worker, workflow or lockfile change belongs to reports. All 58 current-head checks are now clean, including the previously failing approval shard; exact-head Greptile is 5/5 with no new actionable issues. Ponytail’s current turn stopped without a verdict, an authorized nonblocking state. The prior conditional documentation requirement was fixed; old CI failures remain recorded below. - Prior-head evidence at `9bf20467df`: 303 distinct targeted cases passed, not rerun wholesale for this integration: all 132 voice integration cases; 170 cases across 11 complete report, retention, cleanup, recovery, company-removal, shared-worker and startup/hostname suites; and one complete snapshot/schema drift case. This includes 15 report, 13 retention and 14 cleanup lifecycle cases. Voice integration and the four other database owners use separate initially empty databases and migrate themselves. Report cases use their dedicated database after the setup repair. - Five real connection saves over 205 sessions with saved future report deadlines selected 1,025 session rows before the notification repair. They now select zero and preserve the original deadline. The report notification helper accepts only exact session scopes. Configuration, authority and connection hints retain their existing live recovery/reply/cleanup behavior but do not rebuild report history. Real session terminal writes, callback hints, report claims and receipts still reactivate reports. - Database/server typechecks and builds, migration numbering/safety, and module-boundary checks pass. Final server types/build also pass after integrating the retention review repairs. The parent 205-admission, five-configuration-save test still observes zero retained-history rows and preserves its deadline. - The old eager reader selected all 105 saved-report headers before yielding and failed the 100-row budget. Registered reconstruction now uses the existing paged contract and yields at 100 rows per scope refresh. A partial scan can restart on the same owner and reconstruct every saved deadline. At due time all 105 report IDs are fetched exactly once. Future deadlines remain quiet between actual retries. - The company-fairness case places a small company deterministically on page two and requires it in the next 25-work batch after discovery, with all 105 reports processed before the failed provider's retry. Guarded mutations catch a missing cursor reset and bypassed company rotation. Original source was restored before final acceptance. - At prior head `9bf20467df`, migration 0396 was generated with `pnpm db:generate` on the parent 0395 lineage. It creates the partial `(ended_at, id)` report-window index concurrently and replayably through the existing migration runner. All 394 historical SQL files and the journal prefix are unchanged; snapshots 0392 through 0396 remain. Fresh application migration and two replay invocations succeed with a valid index. The real plan case retains 20,001 old sessions, 205 recent sessions, precision-safe keysets, and fewer than 1,000 rows removed by filtering on each page. - Existing real hangup/callback/reply-error producers, callback ownership fencing, monotonic report results, saved retry before provider contact, guest transcript projection after a document lock, transaction rollback/nesting, drain and shutdown remain covered. No table, field or provider protocol is added. Available reports retain the existing finite 24-hour refresh policy. - [Current-parent acceptance and failure ledger](https://github.com/paperclipai/paperclip/blob/9bf20467dfd50b81848e1c8dd7ddc905d206418f/doc/plans/2026-10-25-voice-call-report-sleep-audit.md#current-parent-reconstruction-and-migration-acceptance-october-28) records the failed fresh fixture, eager read, fairness-clock attempts, guards, commands, counts and limits. Older 174/138-case and workspace-wide results belong to their stated heads. No new complete local repository suite, live provider, Cloud wake, host/database suspension or savings claim is made. - [Report configuration-scope repair](https://github.com/paperclipai/paperclip/blob/9bf20467dfd50b81848e1c8dd7ddc905d206418f/doc/plans/2026-10-25-voice-call-report-sleep-audit.md#configuration-scope-review-repair-october-28) records the current 303 cases and measured rescan repair. The prior `80207ba6bb` head had Ponytail 5/5; that review is stale after this change. Fresh exact-head Greptile 5/5 and all CI remain required. Actual failing Ponytail findings must be fixed; a stopped or paused turn without a verdict is an authorized nonblocker. Active no-verdict review waits are capped at 30 minutes from the original request/start (25-minute monitor cutoff). Older scores and parent checks are not inferred as current passes. - Current-master verification: 185 distinct cases pass: final complete voice integration 132, complete report/cleanup/retention 15+24+13, and snapshot/schema drift 1. Each database owner used its own empty fixture database. The first combined run had 183 passing cases and one report-test failure; it is preserved in the audit. A deliberately earlier-ended competing call reproduces the old one-shot mock consuming the intended response. The corrected test selects responses by provider session ID, verifies independent costs for both calls, then rejects stale target data. The isolated repair and full 132-case suite pass; production behavior and timeouts are unchanged. These 185 cases are not added to the older 303 count. - Current migration lineage: official `pnpm db:generate` after actual master creates `0397_known_madrox.sql`; the reviewed concurrent/idempotent report-index SQL is retained byte-for-byte. All 395 existing SQL files and journal entries are unchanged; snapshots 0393–0397 remain and the new snapshot links parent 0396. The application migrator boots a fresh database, repairs a deliberately invalid index during two concurrent replay invocations, records one history row, and replays again successfully. Database build, server build/typecheck, migration checks and module boundaries pass. [Full current-master acceptance and failure ledger](https://github.com/paperclipai/paperclip/blob/c28de398fef074f650eff532952ab6f5563739a8/doc/plans/2026-10-25-voice-call-report-sleep-audit.md#landed-master-migration-and-acceptance-october-28). - Review follow-up and preserved CI timeout: Ponytail’s prior `c28de398` review was 4/5 advisory, with no must-fix production defect and a request to fix the stale design-doc migration reference before shipping. That document now names migration 0397 and links current 185-case acceptance; older 302/303-case evidence is explicitly historical. The optional suggestions about one-shot diagnostic inventory cost and inherited test-clock helpers remain disclosed. CI run `40703490340` failed the unchanged approval-queue backoff test on its existing 15-second timeout and then an activity-log FK in teardown (2,097 pass/one fail/one skip in that shard). The complete unchanged 28-case approval suite passes on a new isolated database; the exact CI timing cause remains unproven. No timeout, workflow or production logic was changed, and no old-head rerun or failure waiver is claimed. This documentation head requires fresh CI and exact-head Greptile. [Review and timeout ledger](https://github.com/paperclipai/paperclip/blob/758cfe15c3e6283d38ba512c8416ccce4d200862/doc/plans/2026-10-25-voice-call-report-sleep-audit.md#review-documentation-and-preserved-remote-timeout-october-28). ## Risks - Process-local commit signals do not observe independent SQL writers or another server process. - Available reports still refresh for 24 hours. The provider's complete flag does not promise immutable final data. - Transcript projection retries remain within the existing report window. This change does not add indefinite projection repair. - One-shot diagnostic `reconcile(limit)` inventories the eligible window before slicing; it remains a manual diagnostic cost, not recurring idle work. Some inherited test helpers advance fake time during assertion retries, an optional reliability follow-up noted by review. - A local deadline cannot wake a stopped host. Cloud alarms and sleep eligibility remain unchanged. No deployed sleep or cost saving is claimed. - This PR depends on the preceding stack. Final master reconciliation and remote review gates remain required. ## Model Used OpenAI GPT-6 through Codex, with repository inspection, code editing, and local test execution. The exact serving model ID and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-28 09:41:15 -05:00
Jamie Buchanan	3339582810	fix(adapter-utils): stop asking the GitHub broker on every local git call (#17886 ) ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Agent runs use `git` and `gh` through the managed GitHub launcher. > - The launcher asks the broker for credentials before every `git` and `gh` call. It also asks for local commands that do not use the network, such as `git status`. > - Each request runs a transaction and an UPDATE in the database. On a busy install this gives hundreds of thousands of writes each day and long COMMIT waits. > - This pull request stops the request for local `git` commands and writes the identity summary only when it changes. > - The benefit is fewer broker requests and fewer database writes. The credential rules do not change. ## Linked Issues or Issue Description - Fixes #17879 ## What Changed - The managed `git` launcher does not ask the broker for local subcommands (`status`, `diff`, `log`, `rev-parse`, `add`, `config`, `branch`, `checkout` and others). It reads past global options such as `-C` and `-c`. An unknown subcommand or option still asks. `commit` and `var` still ask, because the managed author comes from the broker answer. - The launcher keeps no broker answer between invocations, so no GitHub credential is written to a file. The suggestion in the issue to reuse one answer per run is not part of this pull request, because the reused answer would have to rest on disk. - `resolveGitHubOperationCredentials` writes `run_identity_contexts.github` only when the summary changes. - `doc/execution-github-identity.md` describes the behavior. ## Verification - New launcher tests run real `git` against a fake broker that counts POSTs. A 12-command sequence (init, status, config, rev-parse, add, diff, commit, log, branch, show, status, diff) made 12 POSTs before and 1 POST after. The one POST is `commit`. - The same tests check that `var`, `remote`, `fetch`, an alias, and an unknown option still ask, and that `git var GIT_AUTHOR_IDENT` returns the managed author. - A new test covers the unchanged-summary write. - `vitest run` on the launcher, launcher environment, callback bridge, github-operation-credentials, run-identity, heartbeat-github-launchers, native-github-access, openapi-routes, run-trust-preset, http-log-redaction, skill-source-github-access and chat-channels tests: 12 files, 1901 passed, 1 skipped. - `vitest run --project @paperclipai/adapter-utils` on `src`: 1903 passed, 12 skipped, 1 failed. The failure is `sandbox-callback-bridge.test.ts`, a file this PR does not change. It passes alone (89 of 89, three runs). - `tsc --noEmit` passes in `packages/adapter-utils` and in `server`. - Three deliberate breakages each made a test fail: `var` back in the local list, the broker always asked, and the summary write skip removed. - Not run: the full server suite and `pnpm build` (the local machine has no `cargo` for the runner binary). ## Risks - In a partial clone or an LFS repository, a local command that must fetch a missing object runs without a token. - A `git` command that is not local (`commit`, `fetch`, `push`) and every `gh` command still asks the broker once. - No migration. No credential is stored at rest. ## Model Used - Claude Sonnet 5.5 (`claude-sonnet-5-5`, Anthropic) through Claude Code, with tool use (shell, file edits, test runs), wrote the code and tests. - Claude Opus 5.5 (`claude-opus-5-5`, Anthropic) through Claude Code wrote the issue text and this description. - A person asked for the change and submits it. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge	2026-10-28 09:06:14 -05:00
DottaandPaperclip	71b448b9cb	fix(server): schedule inbound voice cleanup from durable obligations (#17580 ) ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Incoming voice calls need approval, expiry, and safe provider cleanup. > - The remaining voice maintenance tick scans admissions every second, including idle endpoints. > - Admission status does not prove that the provider call has ended. > - Existing admission rows can retain the cleanup owner, confirmation, and retry deadline. > - This pull request replaces the cleanup scan with committed changes and actual deadlines. > - Idle cleanup stops querying while unfinished calls keep a recoverable path to termination. ## Linked Issues or Issue Description What existing behavior does this improve? Inbound voice admission cleanup. Its reply-delivery parent #17578 has landed; this PR targets master. Live-session recovery is in #17576. It preserves separate ownership for those services. Current behavior The voice maintenance tick scans expired admissions even when no cleanup is due. A session can commit before the separate approved-admission write. Expiry can then terminate that authorized call. A rejected guest call can be labeled ended before provider termination succeeds. Seven-day retention can delete that unfinished cleanup. Proposed behavior Wake cleanup from committed admission and session changes. Schedule the original expiry or saved retry. Claim current state under the admission lock before provider I/O. Commit approval with session reservation. Keep unconfirmed termination durable and transfer bound calls to live-session recovery. Reason and benefit Configured idle endpoints and confirmed history cause no recurring admission cleanup SQL or provider requests. Approval, retries, crash recovery, and cleanup remain supported. History retention and call reports stay separate migration items. ## What Changed - Recover terminal and rejected legacy admissions whose session binding was lost. Copy known termination or bind a proven matching live session for cleanup without granting approval. - Register inbound cleanup with the shared coordinator and scoped deadline worker. Yield after each 100-row scope page and reset cursors on registration. Remove only cleanup from periodic voice maintenance. Keep complete manual reconciliation. - Add commit-aware notifications at admission, approval, rejection, guest binding, pending-tool expiry, lifecycle confirmation, and session termination writes. - Commit authorized session binding and admission approval together. Recheck cleanup ownership under the same admission lock. Recover older interrupted bindings only from matching session evidence. - Add nullable cleanup confirmation, next-attempt, and provider-account fields to the existing admission table. No new queue table is added. Generated migration 0396 backfills only provable historical termination in committed 1,000-row keyset batches and adds a concurrent partial index. - Save the retry before provider contact. An unconfirmed end receipt retains cleanup. Bound calls remain owned by live-session recovery. - Verify the signed provider account before using a rotated key for unbound cleanup. A different account cannot inspect or end the saved call. Legacy admissions require their original credential fingerprint. - Prevent history pruning and company deletion from erasing unfinished cleanup. Company deletion locks endpoints before the voice owner's check, matching ingress serialization. - Document producer coverage, ownership, deadlines, verification, and remaining sleep limits. ## Verification Published head: `a4e7ccf976fc5793a8914e4e4861aa080d43a4da`. The reply parent #17578 has landed. A normal merge integrates actual master `e7ea2e2961863171956e70fb05d3d1f3790f7909`, preserves its unrelated changes, and regenerates this slice’s migration after landed migration 0395. Fresh exact-head reviews and CI are required. - The previous Ponytail 3/5 finding is repaired: legacy terminal admissions no longer enter approval-only repair, and rejected admissions with valid matching live sessions retain their rejection and persist the binding needed for session-scoped cleanup confirmation. Five regressions failed with ownership conflicts before the repair. Five conflicting-session regressions prevent an unrelated leg from being claimed. No cleanup operation grants approval or starts a provider call. - 24 complete cleanup lifecycle cases and 122 complete voice-store integration cases pass on the repair. After actual-master integration and migration regeneration, the complete 24-case cleanup suite passes again on a new empty PostgreSQL 17 database, and the database migration integration test passes separately. The cleanup owner, voice-store test and admission schema are byte-identical to that tested repair; the cleanup fixture only changes the migration filename. Migration numbering/safety, database build, production server typecheck and build pass. - Migration `0396_tan_paladin.sql` was generated with `pnpm db:generate`. Every landed SQL migration and the complete parent journal prefix are unchanged. Generated snapshots retain exactly 0392–0396, pruning 0391. The reviewed cleanup SQL, concurrent idempotent index and committed 1,000-row historical backfill are retained byte for byte under the new generated filename, registered for top-level execution. The real application migrator boots a fresh database, repairs an interrupted concurrent index, serializes replays and verifies eligible-history backfill across actual transactions. - The preceding published head `48d8356e73308579470c182e759eead6e83173d2` received Greptile 5/5 but failed CI server shard 9/12: one existing connected MCP rate-limit test expected two real-clock calls to share a fixed 60-second bucket. A controlled window rollover reproduced its exact failure. That existing fixture now freezes only `Date` around the same-window 429 assertion, verifies acceptance after advancing one window, and restores the real clock in `finally`. All 92 gateway acceptance cases pass. Production rate limiting, timeouts and assertions are unchanged. This adds one existing CI fixture to the slice; the original failed run remains recorded. - The first regression invocation skipped the suite because it used the wrong database variable; that is not a pass. The corrected invocation reproduced five ownership conflicts. The first fixed cleanup run passed 22 and failed two new low-level deletion test calls on a retained-session foreign key; the regressions now check the cleanup deletion guard at its owning boundary, with production deletion ordering unchanged. The final full suite passes all 24. - The first complete voice-store invocation passed 121 and timed out on one transcript case at the unchanged 15-second limit. That case passed in isolation on a fresh database. One subsequent complete invocation, with builds finished, passed all 122 without source, assertion or timeout changes. The underlying timeout cause is unproven; the original failure remains recorded. A new PostgreSQL startup also failed from exhausted host semaphore capacity; fresh databases on the already-owned server were used without removing shared IPC resources. - Prior source `b8b12199b9` passed 266 distinct cases and carried three guarded mutation proofs; those older results are not added to this repair’s case count. Its CI run 40641168596 failed E2E shard 3 when legacy cancellation hit a one-second PostgreSQL lock timeout. GitHub initially rejected a retry while the run was active, then accepted one targeted retry after completion; attempt 2 passed on that same old head. The lock holder and underlying cause remain unproven. The unchanged Node policy checker’s older failure on ignored generated Copilot manifests and passing tracked-input mirror are also retained in the audit; no workflow, checker, vendor manifest or ignore rule was modified. - [Current repair and failure record](https://github.com/paperclipai/paperclip/blob/a4e7ccf976fc5793a8914e4e4861aa080d43a4da/doc/plans/2026-10-25-voice-inbound-cleanup-sleep-audit.md#legacy-terminal-admissions-missing-their-session-binding--october-28). Current-head CI and Greptile 5/5 gate merge. A completed failing Ponytail verdict must be fixed; missing or interrupted reviews do not block, and active pending review waits are capped at 30 minutes under the maintainer’s explicit instruction. No new full local repository suite, real provider, Cloud alarm, host/database suspension or savings claim is made. ## Risks - The migration distinguishes admission status from physical termination. Legacy ended guest rejections without proof remain cleanup obligations. Missing original credentials can keep those old obligations unresolved. - Future writers must use the existing notification boundary. Independent SQL writers and multiple processes need their own wake contract. - Pending inbound cleanup now blocks company deletion instead of allowing cascade deletion to lose the provider obligation. Existing voice-history deletion restrictions remain. This deliberately includes an active anonymous inbound ring and an old call whose termination cannot be verified. An operator must stop ingress and settle the call before deletion; this slice adds no abandonment override and never treats missing credentials as proof of termination. This is the retained cleanup ownership policy, not a claim that every deletion attempt can complete immediately. - History retention and report processing still run in the remaining maintenance lane. This PR does not extend Cloud wake coverage or claim measured host/database suspension. ## Model Used OpenAI Codex (GPT-6), with reasoning and code execution. The exact serving model ID and context window were not exposed. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-28 08:30:15 -05:00
DottaandPaperclip	7d8bab773d	perf: avoid full JIT and activity scans in Mine unread badges (#17973 ) ## Thinking Path > - Paperclip helps people manage AI agents and their work. > - Mine includes tasks the person created, was assigned, or participated in. > - Its unread badge ranks the visible personal top 100 before checking unread state. > - Correlated participation and privacy predicates can trigger expensive PostgreSQL JIT work. > - This change joins native participant IDs before ranking a narrow candidate projection. > - A partial actor index avoids scanning company activity history for each badge. > - Local representative scoped reads improve while dense unrestricted overhead remains explicit. ## Linked Issues or Issue Description What existing behavior does this improve? The Mine unread badge in the company sidebar. Current behavior: A fresh five-minute window recorded 402 ranking calls and 31.7 seconds of SQL time. Correlated predicates can spend more time compiling than executing. Proposed behavior: Build the same company-scoped participant set, use native issue keys, apply fresh authority before the top-100 limit, then retain the original canonical rank and second unread query. Reason and benefit: Reduce full JIT compilation and avoid an unindexed company-history activity scan. Realistic activity-only participation is included in the measurement. Breaking changes: No API or policy change. This PR adds one concurrent partial index migration. Related Mine rules in #16356 and #17756 are preserved. ## What Changed - Join distinct native participant IDs; guard exact legacy text before UUID conversion. - Skip redundant activity participation already covered by creation/assignment. Sort a narrow eligible candidate projection before canonical activity ranking. - Share existing pending-request and user-activity predicates with ordinary Mine reads. - Add partial `activity_log(company_id, actor_id, entity_id)` for user-authored issue activity. Register its idempotent concurrent migration with the existing top-level/invalid-index-repair runner. - Add real PostgreSQL coverage for visible top 100, unread/archive/source semantics, exact IDs, company scope and fresh grant/private-project access. - Add a pinned service benchmark with separate pre-index/indexed databases, identical data, full positional equality, ordinary-call timings, plans and real migration/cancellation proof. ## Verification - Fourteen focused PostgreSQL 17 tests pass (16.37 s), including assembled badge routes and grant revocation. Full workspace typecheck and build pass on the final production sources. - The earlier full local suite is incomplete: native PostgreSQL startup exhausted system semaphores, independently reproduced with empty initdb. All sixteen failed cases passed with task-owned Docker PostgreSQL 17. This is not counted as a full local-suite pass. Full Linux CI passes on final head `f44e46ce580e8345209d7165f57bd8bf696c517c`. Greptile and Paperclip Review are both 5/5 with zero unresolved comments. - Baseline `70c864633744cd96c0dc7394d631fc7119cd17d2`; source and DDL hashes retained. Two warmups and five alternating samples per arm/cell. Capture and EXPLAIN occur outside timed ordinary service calls. - All twelve 300k-history cells match complete positional rows in both SQL phases and final returned IDs. Half the personal tasks qualify through activity alone; the actor index contains matching and other-human rows. \| Local service case \| Before median \| After median \| Before / after \| \| --- \| ---: \| ---: \| ---: \| \| dense / unrestricted / JIT on \| 18.33 ms \| 25.06 ms \| 0.73x \| \| dense / scoped / JIT on \| 909.30 ms \| 221.10 ms \| 4.11x \| \| sparse / unrestricted / JIT on \| 13.64 ms \| 5.84 ms \| 2.34x \| \| sparse / scoped / JIT on \| 719.07 ms \| 10.79 ms \| 66.64x \| Small paths add at most 0.6 ms at the median. Dense unrestricted paths regress by 6.7–7.7 ms; dense scoped JIT-off is approximately neutral (218.34→223.24 ms). Sparse JIT-off paths improve too. This is not a uniform speedup. The actual baseline fails the compiler-work assertion. The final query avoids full JIT optimization/inlining and exceeds 1.5x where the old plan triggers those passes. Small/sparse controls meet the 25% or 2 ms allowance. Dense no-JIT cases are explicit diagnostics. The optional 60 ms absolute goal still fails at 221.10 ms on dense scoped reads: substantial privacy-predicate execution remains after compilation is removed. The failure is retained rather than counted as green. The actual normal migration runner upgraded 300k activity rows in 668.79 ms including inspection, index build/validation and journal work. Rerun took 21.83 ms; a deliberately cancelled build left an invalid index, and retry repaired it in 187.71 ms. Concurrent reads/writes completed; the final index was 188416 bytes. No migration was run on the hosted database. The million-row mixed-participation sparse control also passes all four visibility/JIT pairs with complete equality: unrestricted JIT-on 13.44→5.76 ms; scoped JIT-on 807.76→11.59 ms. The actor branch visits 36 indexed rows rather than scanning company history. Actual migration+runner took 255.06 ms; rerun 20.32 ms; cancellation repair/retry 241.73 ms. Concurrent reads and writes completed without failures. Reproduce: ```sh pnpm --filter @paperclipai/server exec tsx ../scripts/benchmark-mine-unread-badge.ts --baseline-ref=70c864633744cd96c0dc7394d631fc7119cd17d2 --history-decoys=240000 --verify-migration --assert-performance --evidence-dir=<directory> ``` Add `--fixture=sparse --history-decoys=940000` for the million-row control. The default harness starts disposable embedded PostgreSQL and ignores DATABASE_URL. Recorded evidence used PostgreSQL 17.11 through a scratch constructor provider because the host native runtime has semaphore limits. All normal database allocation/migration/client paths are retained. Source-only EXISTS/lateral alternatives were measured and rejected after company scans or sparse regressions. A time bound would lose historical participation, and existing indexes cannot select a user's activity. This justifies the exceptional partial index migration. The exact sample ranges, plans, failures, source hashes, migration footprint and feedback-loop timing are in `doc/plans/2026-10-27-mine-unread-badge-query.md`. ## Risks - Dense unrestricted reads are slightly slower, and dense scoped reads retain substantial authority work. The PR removes a compilation/lookup bottleneck rather than all badge latency. - The concurrent build scans activity history and can wait for long-lived transactions. Local build/cancellation timings do not guarantee the duration on larger or slower hosted databases. User-authored issue activity gains one narrow index to maintain. - Participation, visibility, ranking and legacy ID semantics must remain exact; the real database regressions exercise those boundaries. - Hosted improvement is unverified. The affected ranking SQL averaged 78.8 ms while HTTP badge requests averaged 752 ms without correlated traces. No merge or deployment is included. ## Model Used OpenAI Codex, GPT-6 family, with reasoning, tool use and local code execution. The runtime does not expose the exact model ID or context window to this agent. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-28 07:20:08 -05:00
DottaandPaperclip	356c7de9b7	fix(runner): bind Grok packs to current admission source (#17972 ) ## Thinking Path > - Paperclip manages agents and their work. > - Native agents use verified Runner and provider-pack artifacts. > - A protected installed pack can be reused when its selected provider profile matches. > - Grok kept profile 1 when its sidecar gained effort, search, and startup diagnostics. > - An older Grok sidecar can therefore pass compatibility and reject the new session fields before provider startup. > - This PR binds the current Grok profile to its admission source so a fresh run selects the current verified pack. ## Linked Issues or Issue Description Refs: #17922, #17942, #17962. Related installation contract: #14024. No duplicate repair was found. What happened? The selected Grok profile digest stayed unchanged across native session contract changes. The installed-pack verifier correctly compared that digest, but the unchanged value let a pre-effort sidecar satisfy a current controller. That old parser rejects `grokEffort` and `grokDisableWebSearch` before the new startup diagnostics run. Expected behavior A fresh Grok run must use a pack that supports its current session contract. Source-only app changes must still permit warm reuse when the selected Grok profile matches. Reattachment must keep its exact admitted artifact authority. Steps to reproduce 1. Retain a protected pack with published Grok profile 1 and ACPX interface 1. 2. Upgrade the controller to the native effort and search contract. 3. Start Grok 4.7 with High effort and disabled web search. 4. The old profile passes installed-pack compatibility, but its sidecar rejects the new fields. Paperclip version or commit Reproduced from master at `09ad9adce2cf4742944353a3707a2f908e9bb35e`. ## What Changed - Advance Grok to profile 7. Keep historical versions 1–6 decodable and keep the Grok 1.0.13 runtime pin. - Stamp the Grok admission source identity into a generated launcher comment. Keep the existing physical command-byte digest check unchanged. Bind effort/search/credential handling, sidecar admission, and Rust backend/session/diagnostic source. - Check the source attestation in the existing TypeScript/Rust profile build gate. Keep its required fixture in the Docker context. Refuse to overwrite a versioned identity after source changes. - Add regression coverage for rejecting the old pack, current-profile warm reuse, exact historical recovery authority, and actual sidecar dispatch of Grok 4.7 High with both search policies. - Re-attest Copilot as profile 71 because its bound shared recovery decoder now retains Grok 6. Preserve Copilot 70 and all earlier identities. Keep the compatibility algorithm, other provider identities, dependencies, lockfile, and workflows unchanged. ## Verification - The production installed-pack regression failed before the profile update: the old Grok pack was accepted. It now passes. - 105 server manifest, artifact, archive, and authority tests passed. - 246 Runner profile, physical launcher integrity, Grok effort/search/credential, and actual sidecar process tests passed; six existing platform cases were skipped. - 31 Node packaging and identity tests passed, including an actual generator CLI regression that preserves all authority files when a versioned identity would change. - 55 Rust ACPX unit tests and 17 real sidecar pipe tests passed. After the final profile declaration, all 55 unit checks passed again. - Final `pnpm -r typecheck` and `pnpm build` passed at the final source. - CI on the preceding head caught Copilot’s stale attestation for the shared recovery decoder. The same current-source test failed locally, then passed after profile 71 was generated with version 70 retained. All 106 affected Copilot/profile checks pass. Final head `78e6d76fc52f492371e15574482b3641735a6d89` passed the full CI workflow; the failed prior job log is retained. - Review follow-up: mutating the Rust backend’s actual Grok descriptor field left the prior identity unchanged. This regression failed before binding `acpx_provider_backend.rs` and passes afterward. Profile 7 retains the prior versioned fixture and recovery decoder. All 179 affected Runner checks and 75 focused server pack/manifest checks passed after this change. - `pnpm test:run` hit the recorded embedded PostgreSQL bootstrap failure after five attempts. The full run also exposed a current-release fixture with the historical Grok digest; it now reads the current profile. Its 11 focused manifest tests now pass. The failed local run log is retained; final exact-head CI passed. - The same filtered-context Docker build that failed CI now passes locally after adding its required source fixture. - A separate probe used the built sidecar in a private HOME with no credentials. It admitted the current profile and the new Grok fields, then returned the closed working-directory rejection before provider launch or inference. - A historical parser probe reproduced the pre-effort sidecar rejection. These probes establish the contract boundary; they do not establish native subscription task acceptance. - Initial restricted local ownership tests failed because loopback listeners were denied. The same tests passed with loopback access. One new dispatcher fixture first lacked required instructions; the completed request passed. These setup failures are retained in local evidence. - Live native task acceptance remains pending deployment. Earlier deployed attempts failed before tool output. No successful native shell proof is claimed. - Final exact-head merge gate: all 62 contexts are clean (57 success, four intentional skips, one informational neutral formal review). Greptile and Paperclip reviews are both 5/5, with no unresolved actionable threads. The formal review uses the existing report-only neutral policy. ## Risks - The first fresh Grok run after upgrade may need to stage the current provider pack. Matching current profiles keep their existing reuse path. - Fresh admission rejects older Grok profile identities. Historical decoding and exact reattachment authority remain separate; this change does not reinterpret an old identity or replace an active session's pack. - Future changes to bound source require a new Grok profile attestation. The build gate fails if the checked-in identity is stale. - Model, effort, search, credential, approval, and retry policy are unchanged. ## Model Used - OpenAI Codex, based on GPT-6, with reasoning, tool use, and code execution. The exact deployment model ID and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass (focused checks; full-suite database failure is retained above) - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-28 07:15:13 -05:00
DottaandPaperclip	cff331f6ca	fix(evals): retain local controller cost origin (#17990 ) ## Thinking Path > - Paperclip manages AI agents and their work. > - Its eval journals retain model costs and operating reservations under one cap. > - The operating policy records the controller's execution origin. > - The schema currently accepts only GitHub-hosted and AWS Fleet origins. > - A local controller must therefore use an inaccurate label or fail admission. > - This PR adds the local origin and keeps the hosted-only schedule gate. ## Linked Issues or Issue Description Refs #17986. No duplicate open PR or issue was found in the operating-overhead/local search. What existing behavior does this improve? The Product E2E operating allowance and its retained journal policy. Current behavior At master `40c1ab36cd`, an unscheduled local controller cannot set `runner: "local"`. The generic allowance validator rejects it. Local qualification can use the same accounting controls but cannot record its origin correctly. Proposed behavior Accept the local origin in the generic allowance. Keep all component, price, cap, expiry, and receipt rules. The scheduled validator still requires `github-hosted` and rejects a local allowance. Reason and benefit Local qualification can retain an accurate execution origin without claiming that its reservations are billed GitHub charges. ## What Changed - Add `local` to the operating allowance's runner type and validator. - Exercise local journal creation, model admission, retained overhead, restart, and reconciliation in the existing boundary test. - Check that a local allowance fails Product scheduled admission. - Pin new hosted Runner controller admission to `github-hosted`. Preserve original labels when reading historical manifests; those reads cannot authorize a new worker. - Exercise the hosted-origin rejection and historical/local reads in both source and copied portable runtimes. - Document the local label and its accounting limits. ## Verification - Before the fix: the new local persistence case and schedule-boundary assertion failed; eight tests passed. - Focused ledger, overhead, operations, and scheduled finalization tests: 71 passed across five files. - Controlled Runner source and portable tests: 86 passed. The new hosted-origin regression failed before the fix. - Full Product support suite at the first commit: 4,524 passed, three skipped, and one retained embedded PostgreSQL bootstrap failure. The same database failure was previously reproduced on a clean baseline. - Separate Node test phase on the host: 137 passed. - Actual Linux controller: database lifecycle tests pass. After installing its missing `zip` utility, the full Product suite has 4,527 passes and one Copilot parent-version coverage failure. That same failure reproduces on clean master `40c1ab36cd` with the same Linux filesystem and dependencies (14 passes, one failure). Copilot files are unchanged. The initial seven ZIP-related failures and the watcher failure remain retained. - The final fresh Linux semantic check passes: `GOMEMLIMIT=2GiB GOGC=50 GOMAXPROCS=1 node node_modules/typescript/bin/tsc --singleThreaded -p tests/runner-e2e/tsconfig.json`. The parallel compiler OOM is retained. No semantic checks were omitted. - Both fresh reviews are 5/5, with the addressed thread resolved. Hosted Build first failed during unchanged Pi setup prefetch with an operation timeout. One job rerun recovered; the original failure remains retained. All 58 latest-head checks are now acceptable. - No paid model requests, sandbox creation, schedule changes, or historical journal edits. ## Risks - The caller supplies this origin. It must describe the actual controller. - `local` does not prove zero compute cost, provide a default allowance, or release a hold. - Both maintained hosted admission paths require the GitHub-hosted controller origin. A previously accepted hosted policy with an AWS/local label now fails new admission. Historical reads preserve the original evidence. ## Model Used - OpenAI GPT-6 through Codex, with tool use and code execution. The exact serving model ID and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-28 02:05:36 -05:00
DottaandPaperclip	d54f776ca0	fix(daytona): bound ephemeral eval lifetime at creation (#17980 ) ## Thinking Path > - Paperclip manages agent work through Runner and sandbox providers. > - Product E2E runs paid work in disposable Daytona sandboxes. > - A controller deadline cannot stop remote compute after the controller crashes. > - Inactivity cleanup does not establish an independent wall-clock lifetime. > - Daytona supports a lifetime in the creation request. > - This change exposes that option in the Daytona driver and verifies the provider expiry. > - Ephemeral evals can retain a finite lifetime even when their controller is unavailable. ## Linked Issues or Issue Description Refs #17947 and #17978. No duplicate creation-lifetime PR was found. What happened? The ephemeral Product E2E fixture configures inactivity stop, archive, and delete intervals. Ordinary task leases do not supply a requested expiry. A crashed controller therefore has no confirmed wall-clock sandbox lifetime for its cost bound. Expected behavior Each ephemeral eval sandbox must carry a provider-enforced lifetime from creation. The driver must reject invalid bounds and reject a sandbox whose provider expiry is missing, expired, or later than the configured remaining lifetime. Steps to reproduce Acquire a Daytona lease from the ephemeral fixture. Inspect the creation request and returned expiry. Before this patch, the request has no lifetime and the lease has no expiry unless its caller supplies one. Paperclip version or commit Current source based on master at `4c314117d2`. Deployment mode Source checkout and the bundled Daytona provider. Verification makes no live provider or model calls. ## What Changed - Add optional positive whole-minute `ttlMinutes` to the Daytona environment configuration. Bump the bundled manifest version so installed manifests refresh. - Send the lifetime in image and snapshot creation requests. Read the provider expiry within the configured liveness timeout before returning the sandbox. Existing ownership-checked cleanup handles a failed expiry check. A cleared optional field is treated as unset. - Return the confirmed expiry on a new lease. Preserve an earlier creation expiry when the caller requests a later deadline. Shorten it for an earlier caller deadline. - Set a 60-minute lifetime on the ephemeral Product E2E fixture. An invariant checks that every selected attempt plus its acquisition budget fits inside that lifetime. - Keep omitted lifetime behavior and the separate warm continuity fixture unchanged. ## Verification - Before implementation, all 12 focused creation-lifetime regressions failed. - Full Daytona plugin suite: 470 passed, six live tests skipped. It covers image/snapshot creation, invalid bounds before allocation, missing/expired/excessive provider proof, cleanup, and both deadline orders. - Product catalog and operations contracts: 95 passed. - Four review regressions failed before the fixes. They cover a cleared field and stalled expiry reads in acquire, probe, and interactive setup. - Standalone Daytona typecheck and build passed against its pinned SDK 0.203.0 and the freshly built plugin SDK. - The pinned SDK forwards `ttlMinutes` in the create API. [Daytona documents its wall-clock semantics](https://www.daytona.io/docs/en/typescript-sdk/daytona/). - Root workspace verification remains the fresh CI gate. Local installed Runner exports are stale in this checkout. - No live model request, sandbox allocation, credential creation, spending-limit change, or schedule activation occurred. ## Risks - A configured lifetime destroys the sandbox and its files at expiry, including while active. Existing environment configurations omit it and retain their current behavior. - Ephemeral evals get 60 minutes so their longest declared 30-minute attempt and five-minute acquisition budget fit. Future longer cases fail the catalog invariant until their lifetime is reviewed. - Provider expiry confirmation adds one read during configured creation. No polling or background worker is added. - Expiry confirmation uses the controller clock and fails closed without a skew tolerance. Live qualification must verify the reported expiry. A tolerance is deferred until there is measured provider evidence; it must not silently extend the declared bound. - These are contract tests. Actual Daytona creation, expiry proof, model usage, and cleanup still need the remaining live qualification. ## Model Used OpenAI Codex, GPT-6 based, with tool execution and extended reasoning. The exact serving model ID and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-27 23:52:52 -05:00
DottaandPaperclip	6cc765bd81	feat(live): deliver recoverable transcripts to interested views (#17456 ) ## Thinking Path > - Paperclip should show live agent output without repeating presentation work for every view. > - Execution, acknowledgements and durable checkpoints must remain independent of browser interest. > - The server already owns authorization and redaction at delivery. > - A shared browser connection can declare which visible runs need full transcripts. > - Catch-up must handle subscription races, disconnects, terminal output and slow consumers. > - This PR delivers the backend and UI contract together without a database migration. ## Linked Issues or Issue Description What existing behavior does this improve? Visible transcript consumers receive recoverable output through one shared browser connection. Current behavior Independent views can create duplicate connections, presentation work and recurring history reads. A subscription race or filtered native history can lose the saved tail. Proposed behavior Negotiate run interests, subscribe before catch-up and retain independent canonical recovery cursors. Keep lightweight lifecycle and attention events available without full transcript delivery. PR 4 of #17097 → #17439 → #17455 → #17456. The runtime feature is independent of hot-upgrade recovery; the stack order is for review convenience. ## What Changed - Add additive WebSocket capability negotiation, replacement interests, revision acknowledgement and resynchronization notices. - Reference-count visible consumer interests on one company-scoped browser connection. Preserve older-client/server behavior. - Reuse canonical structural/current-user/registered-secret redaction for plugin run notifications through the same bounded delivery queue. Keep producer and uninterested streams free of recipient lookups. - Refresh application queries after the matching recovery acknowledgement, including one follow-up after an older in-flight read. Ordinary interest acknowledgements add no refresh. - Keep authorization and redaction at delivery. Browser interest cannot change harness execution, PRP ACKs, checkpoints, accounting or canonical logs. - Deduplicate by sequence and log identity. Catch up terminal output and saved tails without recurring reads during healthy negotiated streaming. - Bound delivery to 1,000 items and 1 MiB. Overflow requires resynchronization; persistent congestion closes the connection. - Preserve compact-history expansion from current master across paginated catch-up. Snapshot the original read window before React can defer its update. ## Verification On current source `f6710f0b3c`, Linux [job 122604880503](https://github.com/paperclipai/paperclip/actions/runs/40624101891/job/122604880503) executes all five run-read permission cases successfully (2.574 seconds), including grant and revocation on the same connection. Its shard passes all 2,430 cases. Current [server-shard job 122604880416](https://github.com/paperclipai/paperclip/actions/runs/40624101891/job/122604880416) has 1,513 passes, one failure and three skips: an unchanged nested-clone expiration/restore test exceeds its 15-second deadline. The preceding `5efc6c48bf` source has identical non-document bytes; [its corresponding job 122601359272](https://github.com/paperclipai/paperclip/actions/runs/40623017917/job/122601359272) passes all 21 nested-clone cases, including that case in 9.505 seconds. The exact timing cause is unproven. The single diagnostic [retry job 122609332597](https://github.com/paperclipai/paperclip/actions/runs/40624101891/job/122609332597) passes all 21 nested-clone cases (61.316 seconds), including the formerly timed-out case in 7.003 seconds, and all 1,514 shard cases (three skips). The failure remains recorded; no timeout or assertion was changed. After the server squash merge and qualification retarget, all 50 focused server cases and all 91 focused UI cases pass again, with both typechecks and token gates. Runner vendor preparation rebuilds current master inputs before those tests. This source needs fresh CI and reviews; prior CI and browser receipts do not qualify it by inference. Current candidate `f6710f0b3c` now targets master `6987c2f20b`, after merged #17097, #17439 and #17455. Its diff contains only transcript delivery and its documentation. It adds no database migration. Retargeting changes only the evidence document; all production and test code is byte-identical to `5efc6c48bf`. On the eighth integration, all 50 focused server delivery cases and all 91 focused UI cases pass, with both typechecks and token gates. The following 35-case receipt belongs to the earlier delivery correction. Four low-queue authorization/decoration stall variants and the late-rejection case fail before correction. They now verify the five-second read deadline, old and negotiated clients, revisions that cannot reset the deadline, unaffected sibling connections, rejected late results, and timer cleanup. The first combined toast run has four loopback EPERM failures and 31 passes; its permitted repeat passes all 35. Earlier 28-case evidence excluded the toast file. The permission correction requires the current HTTP company-scope transcript permission, plus task access, for both native events and legacy logs. Prior Linux source `49a8783e9b`, job 122549913643, executes all five run-read cases, including grant/revocation on the same connection, successfully. That source placed this file in server shard 11; later shard assignments can differ and must be checked against their actual inventories. The older `405bedd189` receipt retains a separate scheduled-retry teardown race and inherited fixture collision; neither is waived. The new head must pass again in Linux CI. The seven extracted stream-recovery tests preserve their assertions. All 39 related legacy/native cases, UI typecheck and token gates pass after restoring the initially missed fixture helper. Earlier full workspace build/typecheck and Chrome journeys at `445a76563c` cover two views, company switches, reconnect, terminal catch-up, reload and zero recurring healthy transcript reads. Those browser receipts are historical source evidence and do not qualify this new head by inference. The [qualification record](https://github.com/paperclipai/paperclip/blob/f6710f0b3c84c6fdb2021df67206261b446dfc97/doc/plans/2026-10-22-hot-upgrade-qualification.md) retains exact earlier UI/history, source-boundary and cleanup failures with their fixes and limits. The workload-cost test preserves bounds and authorization callback counts for zero interests, one viewer, multiple browsers and a slow viewer. Its socket congestion is simulated. It measures neither SQL nor network costs. Current permission checks and the final hosted active-agent/viewer matrix remain unmeasured; no production savings are claimed. Fresh exact-head CI, legacy status, completed Greptile 5/5, resolved feedback and ordinary merge eligibility remain required. The earlier recipient corrections pass all 47 registry/plugin/delivery/WebSocket/toast cases and all 174 UI provider/recovery/interest cases, both typechecks and token gates on source `b202e59a25`. A real bus/host-service test registers a synthetic run secret through the production registry and reproduces its raw notification before the fix; native/legacy/final notifications now redact it, disposal prevents late worker notification. A later P1 review reproduces lost final notifications on settings-read and secret-resolution failure. Both cases fail before correction. Any delivery failure or subscription timeout now sends one content-free stream error and removes the plugin subscription. It never changes the agent execution or run status. Later events start no new redaction reads. The final integrated six-file server lane passes all 50 cases, with server typecheck and token gates. Existing browser delivery behavior is unchanged. Storage and secret-provider seams are scripted. Two real React Query/provider regressions first miss a run during resync; both now refresh after the valid replacement ACK, including pending-read and stale-scope cases. The prerequisite qualification batch passes all 118 cases and E2E typecheck after master integration. Fresh CI, security scan and reviews remain pending on this head. The contribution-rule review correction removes 104 explanatory comments introduced by this slice and keeps the ordering, deadline and plugin-delivery explanations in the delivery document. Existing comments and functional test/lint directives remain. All edited source files have identical parsed non-comment tokens before and after the change. All 50 server delivery cases and all 91 cases in six affected UI suites pass, along with token gates. The new head requires fresh CI, security and review. ## Risks A slow or disconnected viewer must resynchronize from authorized canonical history. It may see a display gap until catch-up completes. Company changes and revoked access must remove delivery interests. This slice adds no database migration and cannot change execution or recovery authority. Full transcript delivery evaluates current company-scope permission per delivery. Active plugin recipients also perform canonical redaction reads; viewer-load database costs on this final source remain unmeasured. ## Model Used OpenAI GPT-6 through Codex, with reasoning, repository tools and code execution. The runtime does not expose a more specific model ID or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [ ] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-27 22:23:30 -05:00
DottaandPaperclip	6b9e5f3a80	fix(evals): enforce qualified ACPX profile admission before paid turns (#17964 ) ## Thinking Path > - Paperclip coordinates agent work through Runner. > - Controlled evals route model calls through a budget gateway. > - The definitions pin each ACPX runtime identity. > - A stale qualified profile currently reaches a paid turn before scoring rejects it. > - The Runner CLI already checks an exact expected profile before it creates a provider. > - This change forwards that existing admission argument through the controller. > - Profile drift can then stop before model spending. ## Linked Issues or Issue Description Refs #17943 and #17929. What happened? The worker in run 40618022700 passed all four behavior checks and retained three final request receipts. Its grader then rejected the old Claude SDK pin. The controlled wrapper could not pass the existing `--expected-acpx-profile` argument to the built CLI. What did you expect to happen? The built CLI must reject a stale expected profile before provider creation. Steps to reproduce Run a controlled ACPX cell with a definition that pins a different SDK from the built Runner. The old wrapper accepts only request and output arguments. It cannot enforce the profile admission supplied by updated definitions. Paperclip version The observed run used `e4b30163bb`. Deployment mode The controlled GitHub Actions Runner protocol workflow. ## What Changed - Forward bounded expected-profile JSON through the controlled wrapper to the same built CLI. - Reject invalid objects, oversized arguments, and profiles on non-ACPX requests before opening evidence. - Exercise a real child boundary and the actual qualified Claude CLI admission gate. - Document the definition/controller compatibility requirement. ## Verification - Controller suite: 77 tests passed. The new regressions fail against the original wrapper. - Hosted and portable controller suites: 8 tests passed. - Actual eval-session CLI contract suite: 39 tests passed. A stale qualified Claude SDK never creates a provider service. - Runner package typecheck passed. - The non-ACPX rejection guard also passed its focused regression after review. - No live provider request was made for this change. - Full repository checks and current-head reviews run on this PR. ## Risks - Updated definitions require this wrapper before they can pass the new argument. Merge the controller first. - Profile identity remains owned by the built Runner CLI. The controller only forwards its existing argument. - Existing callers that omit the argument retain their current behavior. - Optional review suggestions to duplicate the expected-profile hash into controller evidence and add a full built-CLI/controller integration case are deferred. The pinned definition revision retains the expected profile, and both controller entrypoints plus the actual CLI admission boundary are covered. A compatibility error fails closed without a paid fallback. ## Model Used OpenAI Codex, GPT-6 family, with tool execution and extended reasoning. The exact serving model ID and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-27 21:59:20 -05:00
DottaandPaperclip	09ad9adce2	feat(server): adopt running remote agents through durable controller checkpoints (#17439 ) ## Thinking Path > - Paperclip must keep admitted remote work alive while its main server is replaced. > - Runner owns recovery mechanics and exposes opaque checkpoints through #17097. > - The server owns company scope, encryption, Stop, tool authority and execution ownership. > - A successor must prove current ownership before it adopts the original execution. > - Checkpoint bursts must also leave capacity for normal requests and lease renewal. > - This PR persists and adopts that authority through the existing runtime boundaries. ## Linked Issues or Issue Description What existing behavior does this improve? Remote agents retain the original execution during a bounded main-server outage. Current behavior A server restart can lose the controller's local state and connection. An unsafe replacement could repeat a turn or an uncertain mutation. Checkpoint writes in the request pool can also delay ordinary requests during an aligned burst. Proposed behavior Restore encrypted control records from Postgres and adopt the original runner under a fenced lease. Recover known tool receipts through current tool authority. Give control checkpoints a shared pool capped at two connections per database owner. Depends on #17097. Successors are #17455 and #17456. Qualification and presentation remain separate review slices. ## What Changed - Add company/run-bound encrypted checkpoint records and migration 0394. Keep the SQL idempotent after renumbering against current master. - Recover startup and expired ownership through native runtime and heartbeat. Preserve the sandbox lease, admitted runner artifact, harness configuration, native session and active turn. - Keep Stop, finalization, preparation ownership and stale-writer fencing transactional. Preserve graceful detach and natural crash takeover. - Recover committed tool receipts through the existing authority. Reauthorize reads and hold uncertain mutations. - Bound startup retention with the existing coordinator and preserve zero idle scans. - Share at most two checkpoint connections per database client. Keep application and liveness capacity separate. Close the checkpoint pool during shutdown; late writes cannot reopen it. - Count SQL across both application and checkpoint clients. Prove request/liveness progress, command recovery and failure after pool shutdown with real Postgres. ## Verification Project creation recovery now uses the existing project activity receipt owner. It retains authenticated input normalization, fingerprint checks and current run authority after the receipt lock. An absent receipt returns no result before mutation. The new lost-HTTP-response and no-effect regression uses real API routes and Postgres. The seven transport cases pass locally. This Mac skips all 20 database cases. On current source `5de803c2cd`, Linux [job 122593415890](https://github.com/paperclipai/paperclip/actions/runs/40620576702/job/122593415890) executes all 20 project-tool cases successfully (9.480 seconds), including the committed-project lost-response regression. Its shard passes 1,627 cases with three unrelated skips. Server typecheck passes. The transport regression initially has two failures; a subsequent incorrect expectation about schema defaults was corrected before the final pass. Ordinary execution adds no checkpoint writes or recurring work. Current candidate `5de803c2cd` includes the project-creation receipt recovery fix and master `2cd747d1b6`. Migration 0394 retains the prior idempotent checkpoint DDL. Every master SQL file and journal entry is preserved. Snapshots 0390–0394, migration checks and server typecheck pass. The ordinary warm-turn regression fails on its second turn before `a219ab51ad`. After correction, three completed warm turns select the correct prior checkpoint and preserve the original session. All 288 provider-wiring cases pass. The control plane, external persistence callback, identity rotation and filesystem are real; the backend and database-load seam are scripted. The 13 warm admission/configuration variants also pass after final master integration. This does not qualify an underlying harness. At current source `5de803c2cd`, Linux [job 122593415907](https://github.com/paperclipai/paperclip/actions/runs/40620576702/job/122593415907) passes all 940 native-session-executor cases (61.431 seconds), including the warm external-checkpoint behavior; the shard passes 2,358 cases with one skip. Current [Runner job 122593415475](https://github.com/paperclipai/paperclip/actions/runs/40620576702/job/122593415475) passes the native recovery lane: 115 passes and five container-only skips, including the encrypted restore guard, fresh preparation (63.189 seconds), blocked claim lock (1.226 seconds) and recovery beyond 101 blocked owners (3.897 seconds). The first lane passes 2,215 cases with one skip. The SQL cost test reports zero idle and streaming SQL for both output volumes; this is component evidence, not a production capacity claim. At prior candidate `1ff7bb44f4`, Linux job 122549307215 passes all 938 native-executor cases, including the three-turn external-checkpoint regression. Job 122549306469 passes the native recovery lane with 115 passes and five container-only skips, including the encrypted-restore session guard, fresh preparation (63.664 seconds), claim-lock contention (3.961 seconds), and 101-owner recovery (3.824 seconds). This Mac skips the real-Postgres suite. The earlier full local executor attempt has 921 passes and 16 failures during embedded-Postgres initialization before assertions. The original fixture collisions and their corrections remain recorded. At earlier candidate `8fbe62b41d`, server shard job 122535673841 has 3,876 passes, one failure and one skip in an unchanged expiry-worker retry/drain timing test. The same server/database tree on qualification source `b64cac6951` passes all 20 expiry cases and all 3,877 shard cases. The single diagnostic retry, job 122541891915, passes all 20 expiry cases and all 3,877 shard cases (one skip). No assertion was weakened. The original failure remains recorded and its exact timing race is not proven. All Actions checks and legacy status passed on `8fbe62b41d`, with completed Greptile 5/5 and no open feedback. The next candidate `1ff7bb44f4` also passed all Actions checks and Greptile 5/5. Its Paperclip Review remained queued before the new master conflict required integration. The new candidate needs fresh exact-head CI and reviews; old checks do not qualify it. Migration generation is checkpoint-only, all master SQL and journal entries remain unchanged, and migration checks, server typecheck and all 13 warm-owner variants pass after integration. The first migration check was blocked by TSX sandbox IPC; its permitted repeat passes. The first warm-test command used an incorrect path and ran no tests; the corrected command supplies the 13-case receipt. All 16 database pool-lifetime/options/teardown cases pass after granting loopback permission; the first batch had two EPERM failures and 14 passes. Earlier semantic-tool/HTTP recovery, adoption, encryption-batch, zero-streaming-write and idle-SQL receipts remain source-attributed in the [qualification record](https://github.com/paperclipai/paperclip/blob/2ff66f57da0da35bac1c19a2366ea4b84d87a986/doc/plans/2026-10-22-hot-upgrade-qualification.md). That record retains earlier assertion, setup and cleanup failures and their corrections. No failed gate is waived. The historical 300-session component campaign passes four after phases: steady read p99 is 107–108 ms at 500 reads/s and 100 writes/s; aligned-burst read p99 is 103–105 ms after the bounded pool, versus 584–689 ms before. This comparison isolates the persistence corrections. It does not measure the final stack's hosted active-agent capacity. The hosted zero-agent API pair leaves SQL and CPU essentially unchanged, but both arms fail absolute latency gates and candidate peak cgroup memory fails its gate. The active-agent/viewer matrix, different-artifact upgrade and rollback remain open. Run `PAPERCLIP_TEST_DATABASE_URL=<owned-disposable-postgres> pnpm --filter @paperclipai/server exec vitest run src/services/native-runtime/native-runner-restart-recovery.integration.test.ts`. Previous head `f2db8a6568` had one failed workspace setup gate: [job 122555672441](https://github.com/paperclipai/paperclip/actions/runs/40608984238/job/122555672441) passes all 4,169 UI tests and 285 CLI cases (one skip), but the company import/export suite reaches its 30-second health deadline during doctor startup. Its output does not reach the server-start step. The CLI, server, database, shared, adapter and plugin trees are identical on qualification source `a866619d7b`, whose [job 122555886663](https://github.com/paperclipai/paperclip/actions/runs/40609057937/job/122555886663) passes that fixture and all 286 CLI cases. The one diagnostic retry, [job 122561057225](https://github.com/paperclipai/paperclip/actions/runs/40608984238/job/122561057225), passes the formerly failing fixture and all 286 CLI cases. All Actions checks and legacy status on `f2db8a6568` pass. Its exact-head Greptile completed at 5/5 with no open feedback. The current integrated head requires fresh checks and a completed Paperclip Review before merge. The original failure remains recorded; its exact timing cause is unproven. A repeated failure requires investigation and repair rather than another retry. All current-head CI, legacy status, exact-head completed Greptile 5/5, resolved feedback and ordinary GitHub merge eligibility remain required before merge. The latest integration preserves master’s published Copilot v70 profiles and every published migration. Checkpoint migration `0394_conscious_whizzer.sql` was generated with `pnpm db:generate` and retains the prior idempotent DDL. The Runner vendor rebuild and replay parity checks pass. Server typecheck and all 13 warm-owner variants pass after that rebuild. The imported report-lock patch is byte-identical to master; its intentional patch-context whitespace is retained, and the feature delta passes whitespace checks. No hosted experiment was run. ## Risks The pool adds up to two active connections per instance, shared across agents. Checkpoint delivery can wait behind that bound; it still requires its commit. Steady component-test Postgres CPU rises by about 1.7 percentage points of a two-CPU allocation. These corrections do not remove the stack's control and renewal writes. The migration and key must survive replacement. Fresh-database tests and local load do not establish different-artifact hosted upgrade or rollback continuity. ## Model Used OpenAI GPT-6 through Codex, with reasoning, repository tools and code execution. The runtime does not expose a more specific model ID or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [ ] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-27 21:39:23 -05:00
DottaandPaperclip	38d08847b8	fix(runner): keep OpenRouter upstream keys in the parent proxy (#17949 ) ## Thinking Path > - Paperclip manages agents and their work. > - Paperclip Runner starts OpenCode with the selected provider and model. > - The native OpenRouter route passed the reusable upstream key into the child environment. > - A persisted-state scan found that key in an OpenCode database WAL. The exact write operation is not known. > - This pull request reuses the existing parent-held provider proxy for that route. > - The child receives a temporary loopback credential instead of the upstream key. ## Linked Issues or Issue Description What happened? The native OpenRouter path passed `OPENROUTER_API_KEY` into the OpenCode child. A real Product E2E persisted-state scan detected the key in the child database WAL. The scan does not establish which operation wrote it. Expected behavior The runner keeps the reusable upstream key in its own process. OpenCode can call only the selected model through the session proxy. Steps to reproduce 1. Start the OpenCode driver with an explicit or ambient synthetic OpenRouter key. 2. Inspect the fake child configuration, environment, and persisted provider values. 3. Send a request through the real loopback proxy and verify the upstream authorization and exact model. Paperclip version or commit The regression is present on merged master `813e808af462b6a6f9db38b6791e3bfe8465b51e`. This PR is rebased onto merged master `d40f9ac377`. Deployment mode Built from source. The finding came from an AWS Product E2E job. The regression tests use local synthetic servers and a fake child, with no provider calls. Related issue search found #16643 about general inherited environment scope. This change addresses the narrower native OpenRouter path. No duplicate custody PR was found. This PR must remain unmerged until separately approved; it does not change the eval baseline or qualify a new live result. ## What Changed - Reuse the existing parent-held proxy for native `openrouter/` models. - Remove the upstream key from the child environment and retain it in diagnostic redaction. - Keep the selected provider and exact model. Reject alternate-routing fields before the upstream request. Use a session-lived loopback token. - Preserve the effective explicit or ambient proxy bypass list when adding loopback entries. - Add explicit and ambient key regressions, upstream routing checks, and child persistence checks. - Document the boundary and its limits. ## Verification - Final rebased head: full OpenCode driver suite, 64 synthetic tests passed, and runner source TypeScript check passed. Original author run had 61 passing tests before the new master tests. - The two new explicit and ambient regressions fail on the old implementation. - Independent source review passed. The two new synthetic regressions also passed independently. A separately filtered legacy pair hit fixture selection/chmod ordering and is not claimed as a passing run. - Tests use the real driver and proxy with a fake OpenCode child and synthetic upstream transport. They check key exclusion, exact URL/model/authentication, wrong-model and alternate-routing rejection, proxy bypass preservation, redirect rejection, and proxy shutdown. - The two advisory regressions failed before the correction: fallback routing reached upstream, and ambient NO_PROXY was lost. The full 64-test driver suite and source TypeScript check pass after the correction. - No real OpenCode SDK/provider qualification was run. The original WAL write mechanism remains unknown. - Repo-wide typecheck, test:run, and build were not run locally because local native/DB/model execution is excluded. Normal PR CI passed on head `3e1903272ce65b92055ea70f8dc586d9aa5e0205`: typecheck/release registry, general and serialized suites, runner static/Rust/Vitest checks, E2E shards, build, and canary dry run. Greptile is 5/5 on that head. Paperclip Review is neutral with no blocking findings; its two earlier findings are fixed and resolved. ## Risks The native OpenRouter route now uses the existing OpenAI-compatible proxy transport. Synthetic tests do not prove every live SDK response shape. The loopback token remains a credential, is redacted, and expires with the session. This change does not claim isolation of every child secret or persisted value. ## Model Used OpenAI GPT-6.1 Sol (`gpt-6.1-sol`) assisted source investigation, implementation, synthetic tests, and review with tool use. No provider model call was used for verification. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-27 20:57:19 -05:00
DottaandPaperclip	e4b30163bb	fix(evals): preserve the complete trusted controller artifact inventory (#17943 ) <!-- entire-trail-link-start --> https://entire.com/gh/paperclipai/-/trails/103/changes/paperclip/103 <!-- entire-trail-link-end --> ## Thinking Path > - Paperclip manages real agent work. > - Controlled Runner evaluations record model spend and traces. > - A trusted build creates one portable controller with a complete file inventory. > - GitHub artifact upload omitted one hidden dependency metadata file. > - The next job correctly refused the incomplete inventory before any paid worker started. > - This change preserves all inventoried bytes without relaxing verification. ## Linked Issues or Issue Description Refs #17889, #17929. What happened? [Run 40585138437](https://github.com/paperclipai/paperclip/actions/runs/40585138437) failed at copied controller verification. Its artifact contains 294 files; its signed inventory expects 295. The only missing file is `server/node_modules/protobufjs/node_modules/@protobufjs/pool/.npmignore`. No extra files exist. Every paid worker was skipped and no model request ran. Expected behavior The trusted controller artifact preserves its full inventory, including hidden package metadata. The strict verifier rejects any actual change or missing file. Steps to reproduce Build the portable runtime, upload the directory with the action's default hidden-file exclusion, then verify the downloaded artifact against the original receipt. ## What Changed - Enable hidden files only on the fresh trusted controller code upload. - Download that exact upload and run a real artifact-service round-trip test before any private preparation. The test fails if the upload drops hidden files again; it tests the actual transport instead of matching a YAML flag. - Keep the strict byte inventory and trusted source/receipt checks. - Document why this code artifact differs from private attempt evidence, which still uses the protected archive. ## Verification - Exact retained artifact comparison: one missing `.npmignore`, zero extra files. - `actionlint .github/workflows/runner-protocol-live-evals.yml` passed. - Protocol workflow security tests: 14 passed. - The artifact-service integration test is explicit-only locally. The controlled workflow supplies the real downloaded artifact, trusted source and receipt digest. - No product runtime, provider routing or grading code changed. CI runs broader checks. Fresh controlled workflow qualification follows merge. ## Risks Hidden files are allowed only in the code-only output of the provider-credential-free build. Raw private evidence and credentials do not enter that upload. The artifact verifier still requires every file and SHA-256 from the trusted receipt. ## Model Used OpenAI Codex, GPT-6 family, with reasoning, repository inspection and code execution. The exact serving model ID and context window are not exposed to this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-27 20:55:18 -05:00
DottaandPaperclip	0d22e27dc4	fix(runner): preserve closed native startup diagnostics (#17962 ) ## Thinking Path > - Paperclip runs agents through a controlled execution boundary. > - Native Runner starts ACPX providers through a TypeScript sidecar and a Rust transport. > - That transport hides arbitrary provider messages because they can contain credentials. > - Grok admission failures currently have no stable code. Other startup failures can also lose their owning stage. > - A real native startup failure therefore reports only `classification=unclassified`, even when the ordinary subscription hello test succeeds. > - This pull request preserves fixed failure categories without forwarding provider text or changing admission policy. > - The benefit is a useful next diagnostic result before another functional repair or retry. ## Linked Issues or Issue Description Refs #17922 and #17942. What happened? A native Grok session failed before its first tool. Runner assets passed verification. The Rust rejection discarded the cause because only closed error codes may cross that boundary. The existing admission guard used plain errors. Startup errors outside that guard could also lose their stage. Expected behavior Report a fixed Grok admission reason, or a fixed startup stage when no known error code exists. Keep credentials, provider messages, session IDs, and paths out of the classification. Keep the failure and cleanup effective. Steps to reproduce 1. Have a Grok ACP fixture return a session without its native effort acknowledgement. 2. Start it through the real ACPX client and pass the failure through the sidecar classifier. 3. Before this change, the result is `acpx_sidecar_command_failed`. Rust reduces that to `unclassified`. 4. The same loss occurs for injected sandbox, credential, and runtime admission failures. ## What Changed - Give Grok effort admission errors fixed codes for missing acknowledgement, model or effort mismatch, session mismatch, conflicting configuration, drift, and invalid protocol use. - Record closed host startup stages in a private weak map. Preserve the original error object, cancellation, and resource cleanup. - Prefer existing known error codes over a fallback stage. Ignore arbitrary provider-supplied stage properties and messages. - Map only exact new codes to Rust diagnostic categories. Add real ACPX-client and sidecar-pipe regressions with secret canaries and unknown-code controls. - Bind the changed shared source and new diagnostic modules in Copilot profile 70. Preserve profile 69 and earlier history. - Document the diagnostic contract. There are no dependency, lockfile, workflow, auth, model, permission, or retry-policy changes. ## Verification - Red before the production change: four TypeScript cases lost the native reason or host stage. A Rust case returned `unclassified` for the new closed categories. - Final focused checks: 320 tests passed: 241 across sidecar classification, Grok admission, the real ACPX client, recovery, runtime adapter, and Copilot installation; all 79 host integration tests also passed in isolation. These include nine startup-stage cases, translated errors, actual missing Pi skill materialization, missing Copilot/Cursor credentials, and a missing workspace binding. - Review follow-up: a translated Copilot rejection lost its stage, and a real Pi skill-loading failure reported configuration. Both regressions failed before the two-line repair and pass afterward. Stage recording now follows provider translation and starts before Pi skill acquisition. The current unpublished Copilot 70 identity was regenerated. - Formal review follow-up: missing Copilot and Cursor credentials reported configuration. Both cases failed before the two-line stage repair and pass afterward. A missing-workspace case also verifies the separate binding catch. - Seven Rust unit checks and 17 sidecar transport integration checks passed. The pipe checks preserve known categories and reject unknown suffixes without disclosing the provider message. - `pnpm -r typecheck` and `pnpm build` passed. Rust formatting and the generated profile/source identity checks passed. - Host integration history is retained: one complete 73-case host run passed. Other batches hit credential-port ownership errors in different existing cases; the four new stage regressions passed. The final 79-case host run passed after the last review fix. The prior intermittent lease failures remain recorded and are not claimed fixed here. - `pnpm test:run` was attempted and stopped after repeated embedded Postgres bootstrap failures. The same local database failure predates this change. Full CI must pass before merge. - A metadata-only probe with pinned Grok 1.0.13, private HOME, synthetic credentials, a local catalog, and no inference passed fresh Grok 4.7/High admission and cold restore. This is supporting ABI evidence. It does not prove live subscription execution. - Initial CI history is retained: server shard 1 failed its unchanged final rate-limit slot test (two requests allowed instead of one). No server policy code changed here. The review follow-up requires fresh full CI; this is not claimed fixed. - Second CI history is retained: chat shard 2 failed the unchanged Slack session-sync quiet-queue test (three selects during the quiet window). The first rate-limit failure did not recur there. No chat or server policy code changed in this PR. Final head `654bc5aa21` passed all 61 contexts (56 success, four intentional skips, one informational neutral review). Both final-head reviews are 5/5 with no new findings; the Paperclip app publishes its completed review as an informational neutral check. - Live native acceptance is still pending. After deployment, retry the original bounded task and inspect its actual shell output, exit status, run result, and saved task state. This PR fixes the evidence gap; it does not claim the startup incident is resolved. ## Risks - Shared startup failures can now receive a stage category. The private weak map cannot import provider-defined fields. Known error codes keep priority. - A category could point at the wrong stage. Tests inject failures at the installation, sandbox, credential, and runtime boundaries. Existing cancellation and cleanup tests remain in place. - The Copilot profile identity changes because shared source changes. Historical identities remain decodable and cannot authorize a current launch. - The next live failure may require another functional repair. Admission remains closed until the requested configuration is verified. ## Model Used - OpenAI Codex, based on GPT-6, with reasoning, tool use, and code execution. The exact deployment model ID and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass (focused checks; full-suite environment failures are recorded above) - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-27 20:53:02 -05:00
DottaandPaperclip	8406047b4e	fix(server): schedule join request retention from durable deadlines (#17508 ) ## Thinking Path > - Paperclip manages agent companies and their access requests. > - Pending join requests appear in the attention feed and can age into automatic archival. > - The maintenance tick reads those requests even when no archive is due. > - Existing request rows already store the activity timestamp needed for retention. > - Committed changes can wake a worker that registers the next actual deadline. > - This PR gives join-request retention its own bounded worker and removes its recurring feed scan. > - Idle and resolved history stop producing retention traffic without changing access approval. ## Linked Issues or Issue Description What happened? Every retention maintenance pass reads pending join requests through the attention feed. Empty, resolved, kept, and future-due states still participate in recurring discovery. Expected behavior Committed request and retention changes wake the owner. It waits until the next actual archive deadline and stops querying when no eligible request remains. Existing approval and visibility behavior is preserved. Steps to reproduce Start an idle company with no pending join requests, or with requests younger than the 90-day archive threshold. Observe the maintenance feed repeatedly select join_requests. No state change is needed to cause those reads. This PR targets master after #17505 merged. Approval retention is #17497. Other attention source kinds remain separate migration duties. No duplicate open join-retention PR was found. ## What Changed - Add a join-request retention owner that preserves pending status, active-company visibility, matching invite ownership, and keep/archive controls. Invite expiry or revocation retains the existing feed policy. - Reuse one `createDecisionRetentionSweep` for approval and join paging, atomic retention and finite scan cycles that revisit failures despite continuing arrivals. Eligibility and source-row locks stay with each owner. - Register real saved deadlines, rounded upward in SQL to millisecond precision, with the existing coordinator. Preserve 100-row pages and thirty-second notification coalescing without idle polling. - Materialize unseen join state inside the existing authorized keep/archive/revive transaction, preserving archive choices and source locking. - Notify before request inserts and updates in the existing acceptance and Slack transactions. Use a small SQL-only helper for replay and approval/rejection updates. Company status, budget pause/resume, deletion, and retention controls notify this owner too. - Preserve the approved-only API-key consumption path without a new wrapper; it cannot produce pending retention work. - Exclude join requests from maintenance feed collection while retaining normal UI reads. - Add an idempotent concurrent partial pending index and prune old schema snapshots through the existing generator. - Document producer coverage, boundaries, failure evidence, and remaining work. ## Verification Test revision: `df1815fbba`. Normal integration of landed workspace precision `d23dd19750` has an identical complete source tree. This remains only the join-retention duty and its shared approval-retention mechanics, targeting master. - 55 worker cases pass, including two new PostgreSQL regressions that failed before repair: continuing overdue arrivals no longer postpone a recovered failure indefinitely, while an entire failed page still allows later healthy rows to progress. - The nine complete suites passed 341 cases but failed an attention cleanup hook after its 16,400-run case. After vacuum/analyze of only that disposable fixture, the full 31-case attention suite passes unchanged. Together with the original eight passing suites (311 cases), all 342 distinct cases pass across complete-suite executions. Recovery is established; the original cleanup slowdown is not claimed explained. Server typecheck and production build pass. - Earlier CI at `df1d4d0` failed the unchanged decision-expiry restart deadline assertion (a thirty-second retry appeared before the saved expiry). All twenty unchanged expiry cases pass locally, but the CI timing cause remains unproven. No retry, timeout relaxation or assertion change is used to dismiss it; fresh final-head CI remains required. - Five regressions failed before repair: three unseen join controls returned 404, and both owners advertised a microsecond deadline one millisecond early. All pass. Two old real-producer expectations failed after the correct rounding change; they now derive exact expected milliseconds independently from database integer microseconds instead of truncating a JavaScript Date. - The initial timing-only concurrency test still passed a missing-lock mutation. It now observes the actual PostgreSQL wait before releasing the writer. Production passes; removing the lock fails with zero waiters instead of one. Source is restored before commit. The archive-first committed-order case confirms that later activity stays archived until explicit revival; no broader race guarantee is claimed. - Generated concurrent/idempotent `0393_open_grandmaster.sql` adds only the pending join index. All 391 parent journal entries and historical SQL files remain unchanged. Five generated snapshots remain (0389–0393). Migration safety/numbering, schema drift and actual apply/replay on six isolated PostgreSQL fixtures pass. - Existing lifecycle cases retain real HTTP invite acceptance/approval/rejection, Slack identity linking, rollback/outer commit, source visibility, failure rotation, drain/resume and shutdown coverage. Earlier stack setup and CI failures remain in the owning audit and stack ledger; they are historical evidence, not this head's acceptance. Commands: server Vitest for `join-request-retention-work`, `approval-retention-work`, `approvals-service`, `attention-service`, `decision-retention-service`, `budgets-service`, `tool-gateway-service`, `server-startup-feedback-export`, `scoped-deadline-work`; server typecheck/build; DB migration checks, snapshot drift and actual apply/replay. Fresh exact-head CI, security and Greptile/Ponytail 5/5 remain required. No full local repository-suite, deployed suspension or cost claim is made. ## Risks - A future supported producer must signal its transaction. Independent SQL writers and another active server process are outside the process-local notification contract. - A writer that wins the source lock first is rechecked before archival. If archival commits first, later activity preserves the archived state until explicit revival. Existing invite replay expires before the retention cutoff and Slack replay deduplicates. Future producers needing renewed visibility must request revival. Cross-table visibility retains the existing contract. - The worker registers only under the existing maintenance enablement switch. The internal deadline does not add Cloud alarm coverage or relax conservative sleep blockers. - New eligibility can wait within the thirty-second aggregate notification window; known deadlines preempt it. - Archival preserves pending approval status. Other attention sources and aggregate maintenance remain separate work. ## Model Used OpenAI Codex, GPT-6 family, with reasoning and code execution. The exact serving model identifier and context window were not exposed. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-27 20:03:16 -05:00

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