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codex/runner-pi-qualification-coverage
1820
Commits
| Author | SHA1 | Message | Date | |
|---|---|---|---|---|
 DottaandPaperclip
|
5eba61ece9 |
Merge recorded master baseline into Pi 1 production candidate
Integrate
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DottaandPaperclip
|
2d60b454a7 |
feat(runner): upgrade closed Pi runtime to 1.0 profile 11
Preserve structural system messages without assistant attribution, disable native cache warming, and require queued continuation acknowledgements. Pin the complete upstream 1.0 dependency closure and retain historical profile evidence. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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Devin FoleyandPaperclip
|
dd9983b894 |
fix(adapter-utils): release restore locks when a process crashes (#14869)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Agent runs restore workspace files and collect instruction-file changes. > - Writers to the same target directory must wait for each other. > - The current lock records a PID, which a new process can reuse after a crash. > - A reused PID can keep an orphaned lock alive and make each later run fail. > - This pull request makes a SQLite file lock decide ownership. The OS releases it when the process exits. > - Later runs can proceed after a crash, and concurrent live writers remain protected. ## Linked Issues or Issue Description Refs #10914. This addresses crash recovery. It does not cancel a stalled operation in a process that is still alive. Related work: #9667, #14787, and #12187. The earlier attempt in #9667 assumes one live server per lock root. This implementation uses an OS-backed lock to support concurrent writers without treating a different process token or an old timestamp as proof of a dead owner. It retains the private lock root and bounded timeout diagnostics from the merged changes. After a process dies while holding a restore lock, a replacement process can reuse its PID. The existing `process.kill(pid, 0)` check then reports a live owner forever. Later runs can complete their model turn but fail during file collection or restore. ## What Changed - Hold a SQLite `BEGIN IMMEDIATE` transaction for each directory write. Use the existing built-in `node:sqlite` dependency. - Keep each lock database on a stable inode. Keep PID and time metadata only for diagnostics. - Retain the 30-second asynchronous wait and existing timeout error code and diagnostic fields. - Fail closed when an old directory lock exists. Document a stopped-writer upgrade and rollback procedure. - Add real child-process tests for crashes, PID reuse, live owners, and connection cleanup. Cover callback failures, independent targets, stable inodes, invalid lock files, and ambiguous legacy records. ## Verification - Before the fix, the crash/PID-reuse test and the live-owner test both failed. Both pass with this change. - `pnpm exec vitest run packages/adapter-utils/src/directory-merge-lock.test.ts packages/adapter-utils/src/workspace-restore-merge.test.ts`: 56 tests passed. - Restore and agent-file working-copy integration tests: 118 tests passed before the additional connection-cleanup test. - `pnpm -r typecheck`: passed. - `pnpm build`: passed. - Full GitHub CI: all checks passed, including Linux workspace tests, server test shards, build, typecheck, and browser tests. - Greptile: 5/5, with no review threads or unresolved comments. - `pnpm test:run`: started locally, then stopped with SIGINT (exit 130) after full CI passed. The local serial run did not complete and is not counted as a full local pass. The completed CI shards provide the full-suite result. ## Risks - **Upgrade and rollback require a drain.** Stop every old writer that shares an instance root before switching protocols. Old and new versions must not write concurrently. - Existing legacy `.lock/` directories remain blocking. After all writers stop, preserve run evidence and move those directories to an operator scratch directory. The new code does not infer that they are abandoned from PID or age. - Never delete or replace a `.lock.sqlite` file while writers can run. These small files remain after release. - The shared filesystem must support reliable SQLite locking. Broken network-filesystem locking is unsupported. - This change prevents new orphaned ownership. It does not recover file changes lost during earlier failed collections, or interrupt a live operation that stalls. - No application database migration or new native dependency is required. See `doc/workspace-restore-locks.md` for the procedure. ## Model Used OpenAI Codex based on GPT-6, with code execution and repository tools. The exact model variant and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass (focused regression and integration suites; see the full-suite note above) - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
|
b97f3ce7c7 |
test(runner): preserve idempotent receiver result retries
Verify identical tool-result retries emit one sidecar resolution while changed payloads, operations, and error status remain rejected. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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Dotta
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f6406e7e55 |
Merge frozen master into the rich ACP production candidate
Preserve incremental Codex checkpoints and ACP unchanged-directory ownership as separate warm-session paths. Combine cancellation commit fencing, terminal outcome recovery, and both native fixture catalogs. Keep all candidate qualification states and provider profile identities unchanged. Validation: 629 controller unit checks, 5 heartbeat cancellation checks, 210 runner/profile/sidecar checks, 44 catalog checks; token gates, Rust source formatting, and generated protocol manifest pass. Database tests and builds intentionally deferred. Source-aliased no-emit checking is blocked only by the borrowed ACPX SessionRecord declaration lacking the already-patched cursor_prompt_usage field. |
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DottaandPaperclip
|
4ac374103f |
fix(connections): repair Asana MCP and add shared-app sign-in (#14756)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work.
> - Connections let agents use provider tools through the permission
gateway.
> - Asana provides an official remote MCP server, but its v2 server
requires a registered MCP OAuth app.
> - Setup can discover retired v1 endpoints and send a callback that
differs from the displayed URL.
> - This pull request repairs custom app setup and adds sign-in through
Paperclip's shared app.
> - Users can choose their own app without enrolling with Paperclip
Cloud.
> - Agents can use Asana tools after the user connects their account and
sets action permissions.
## Linked Issues or Issue Description
Related: #14739 supplies the personal credential repair used by resumed
Asana setup. No duplicate Asana authentication PR was found.
**What happened?**
Asana setup failed even with a user-created app. Root discovery metadata
still points at v1. MCP v2 uses the Asana OAuth issuer and requires an
MCP app with a client secret. Local setup also displayed a localhost
callback while an Origin header could make authorization use a numeric
loopback callback.
**Expected behavior**
Sign in with Paperclip's app when its broker profile is available. Keep
custom MCP app setup available without Cloud enrollment. Use the correct
issuer, callback, client credentials, and resource throughout setup.
**Steps to reproduce**
1. Open Asana in the connection catalog.
2. Supply an Asana MCP app's client ID and secret.
3. Start OAuth on a local instance opened with a numeric loopback
address, or resume a draft that cached v1 metadata.
4. Observe the wrong discovery endpoint or callback mismatch.
**Paperclip version or commit**
Reproduced from
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467125fafb |
feat(connections): one-screen connector setup with stated defaults (#14811)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work
> - Agents use Connections (the Apps catalog) to act in services like
Notion, GitHub, Google Workspace and Railway
> - Each connector asked the user to answer setup questions before it
went to the provider. Most of the questions already had the correct
answer selected
> - ROADMAP.md lists "simpler setup" for Apps and Connections as ongoing
work. This change continues that work
> - This pull request removes the questions that Paperclip can answer
itself. It states the defaults in one line and moves the choices behind
"Change" and onto the Permissions tab
> - The benefit is that most connectors take one click in Paperclip and
then the provider's own consent screen
## Linked Issues or Issue Description
No public issue exists. This is the description, from the enhancement
template.
**What existing behavior does this improve?**
The setup flow for tool connectors in the Apps catalog.
**Subsystem affected**
Apps and Connections: `ui/src/features/connections`,
`ui/src/pages/apps`, the `packages/shared` app definitions, and the
OAuth routes in `server/src/routes/tool-access.ts`.
**Current behavior**
Every connector opened with an Access step. The step asked who can use
the connection and which agents get it, and both answers were already
selected. 18 connectors also asked "How do you want to connect?" when
Paperclip could rank the methods. The Google apps and Postman also asked
"What should Paperclip be able to do?" before sign-in. The four gateway
connectors (Zapier, Arcade, Composio, Executor) used a separate two-step
wizard. Asana was pinned to a customer-owned OAuth app, so the user had
to register an app in Asana's developer console. The "Set all" control
on the Permissions tab changed only one action. After the user approved
access, Railway's consent page showed "you can close this window" and
did not return to Paperclip.
**Proposed behavior**
One screen per connector, with one primary button. The screen states the
defaults in one sentence, for example "Connects for everyone in your
organization, available to all agents". A "Change" link opens one
Advanced panel. When the provider's metadata allows dynamic client
registration, Paperclip registers a client itself. Connecting lands on
the Permissions tab. On that tab, "Set all" changes every action in the
group.
**Reason and benefit**
The user makes fewer decisions before the connection exists. Most
choices are easier to make after the connection, on the Permissions tab,
where a change has an immediate effect.
**Breaking changes**
None. No schema or API change. Existing connections keep their settings.
## What Changed
- **No Access step.** `ConnectionSetupFlow` no longer has the Access
step. The flow shows the resolved default above the primary button and
on the completion screen. The access controls moved into one Advanced
panel. The panel opens automatically only when a setting in it is
required.
- **A default method for every app.** The flow always picks the ranked
default method. Alternate methods are in the Advanced panel. The Google
and Postman capability choice is not asked before sign-in. The
write-capable method is the default.
- **Gateway connectors.** `RemoteMcpProductionSetup` (Zapier, Arcade,
Composio, Executor) no longer has its own Access step. Its commit path
and the main commit path use one helper, `askFirstCatalogEntryIdsFor`,
for server-suggested defaults.
- **Dynamic registration from live metadata.**
`canRegisterOAuthClientDynamically` now allows registration when the
provider advertises a registration endpoint, even if the catalog entry
lists only customer-owned clients. The Asana and Linear definitions and
catalog text match live probes. Asana issues clients for loopback
callbacks only, so a hosted deployment still needs an Asana app.
- **Connection setup states.** New
`packages/shared/src/connection-setup-state.ts` sorts each method into
`instant`, `authorize`, `paste` or `register`. The gallery card verb
("Connect" or "Add key") comes from this resolver and the instance's
ownership availability.
- **Generic MCP.** The generic path no longer asks "Does it need a key?"
first. A credential challenge from the server shows the key field.
- **Permissions tab.** Each action row shows its risk level. Each group
has a "Set all" control. The control sends one change for the whole
group. Before, each row's save started from the same render, so the
saves overwrote each other. The Zapier/Arcade/Composio/Executor setup
screen had the same defect.
- **OAuth callback interstitial.** A cross-site browser navigation to
`/api/tools/oauth/callback` gets a small same-origin "Finishing your
connection…" page. That page repeats the request, and the repeat does
the code exchange. Railway's consent page replaces itself after about
two seconds, and the code exchange plus tool discovery takes longer than
that. The interstitial uses only a meta refresh, because the OAuth code
is single-use. Requests without `Sec-Fetch-Site: cross-site` take the
old path.
- **Linear registers through its MCP server.** Linear pins the console
endpoints at `linear.app`. Pinned endpoints now replace discovery only
when the method cannot register, or when the connection has an
operator-entered client. So a Linear connection now finds the
registration endpoint at `mcp.linear.app`.
- **Own-OAuth-app recovery stays on the one-click screen.** When the
method also accepts a customer-owned client, the client fields are in
the Advanced panel. The panel opens after a failed sign-in. "Try again"
resumes the draft with the operator's client.
- **E2E specs** follow the one-screen flow. The Access-step clicks are
removed, the specs open **Change** before they pick agents, and they
expect GitHub's **Add key** verb.
- **Default permissions do not change.** New connections still allow
every action. The user can set actions to Ask first or Off on the
Permissions tab.
## Verification
- `cd ui && npx vitest run src/pages/apps src/features/connections
--no-file-parallelism`
- `cd packages/shared && npx vitest run src/app-definitions.test.ts
src/connection-setup-state.test.ts`
- `cd server && npx vitest run src/__tests__/tool-access-service.test.ts
src/__tests__/remote-mcp-connectors.test.ts`
- `pnpm check:token-gates`
- New tests:
- `PermissionsPanel.group.test.tsx` checks that "Set all" sends one
change for the whole group. It fails on the old code.
- `action-permissions.test.ts` checks the group update.
- `connection-setup-state.test.ts` checks the four setup states.
- A server test checks that a cross-site callback gets the interstitial
and does not use the OAuth state, and that the same-origin repeat
completes the connection.
- Manual check on a hosted staging deployment. GitHub, Google Drive,
Composio, Notion, PostHog and Railway each connected from one screen and
returned to the Permissions tab. On Railway, "Set all" changed all 65
write actions, and the change remained after a reload.
- Visual changes: snapshot baselines are intentionally not updated. See
the `doc/design/DECISION-SHEET.md` entry "Per-change snapshot
verification demoted to dormant (Jul 13 2026)".
## Risks
- **Fewer confirmation clicks.** Organization-wide access is the
default, and the user does not confirm it on a separate step. This was
already the preselected answer. The flow shows the default before the
user clicks and again after the connection.
- **Google write scope.** Google apps now request the write-capable
scope by default. A narrower scope needs a new sign-in.
- **Dynamic registration from live metadata.** A provider can advertise
registration and then reject a redirect URI. Asana rejects hosted
callbacks, for example. In that case registration fails, and the
customer-owned client path remains available for recovery.
- **Callback interstitial.** The OAuth callback adds one same-origin
step for cross-site browser navigations. Browsers without `Sec-Fetch-*`
headers use the old direct path.
- Chat and bot connectors (Discord, Telegram, Microsoft Teams, iMessage)
do not change.
> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.
## Model Used
- Claude Opus 5.5 (Anthropic), model ID `claude-opus-5-5`, used through
Claude Code with tool use (shell, file editing, browser automation) and
extended thinking. It wrote the code, the tests and this description. A
human product owner directed the work and tested it by hand.
## Checklist
- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge
🤖 Generated with [Claude Code](https://claude.com/claude-code)
---------
Co-authored-by: scotttong <squadbot000@gmail.com>
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
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Dotta
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22c78242a4 | fix(runner): require receiver acknowledgment for semantic receipt | ||
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DottaandPaperclip
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2e4e06d7f0 |
fix(runner): commit receipts only for admitted sidecar frames
Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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Dotta
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3665daf9dc | fix(runner): bind normalized semantic receipt inputs | ||
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DottaandPaperclip
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0a67197e14 |
test(runner): allow bounded native shim fixture setup
The Copilot shim test copies and hashes the complete host Node closure before launching the bootstrap and owned shim. Two CI runs stopped at Vitest's default 5s limit (jobs 110198660276 and 110200639147), while identical code passed in 1081ms in job 110197353844. Use the adjacent real-Node closure test's 30s envelope; preserve all assertions, product deadlines, and retry behavior. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
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f6f23961da |
fix(runner): scope Cursor identity policy to its sidecar profile
Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
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a06fa49483 |
chore(runner): integrate pending v10 correlation for qualification only
Preserve both reviewed source and historical qualification evidence. CI-only branch; do not merge. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
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041d84760f |
fix(runner): align Cursor control IDs and retain native receipt evidence
Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
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8ec354f609 |
test(runner): consume ordered permission notifications in forwarding fixture
Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
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1a941e85e5 |
fix(runner): preserve event order before native input dispatch
Queue bounded internal request callbacks alongside notifications so the Codex driver maps earlier tool activity before exposing permission cards. Dispatch without awaiting human answers and discard stale callbacks after closure, replacement, or durable settlement. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
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e5ef415eef |
fix(runner): version rich tool correlation profiles
Bind Cursor permission identity and Copilot semantic receipt sources across TypeScript, native admission, provider packaging, and recovery. Preserve historical v9 fixtures and pending qualification status. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
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4eca3e8a02 |
fix(runner): correlate Copilot semantic tool results with bounded receipts
Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
|
ae0c0f9f71 |
fix(runner): preserve Cursor permission tool identity
Reuse the existing provider tool identity transform across native evidence, permission details, and canonical activity without changing the provider request or option binding. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
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7bbac082ef |
fix(runner): retain reviewed Cursor projection failure reasons
Apply the two provider evidence files from
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DottaandPaperclip
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ef06355ad4 |
test(runner): verify permission forwarding through transport handler
Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
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6ab85a3733 |
fix(runner): preserve native permission tool correlation
Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
|
64dd389ebe |
fix(runner): retain strict active-stop evidence diagnostics
Accept matching PRP v1/v2 session envelopes without weakening pending-operation identity or cancellation checks. Record closed Cursor projection failure codes while keeping external error text private and incomplete evidence disqualifying. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
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d46931a522 |
fix(runner): preserve native permission tool correlation
Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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Devin FoleyandPaperclip
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0d3e7bf6ac |
fix(daytona): keep commands alive after log stream closure (#14799)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Sandbox providers run agent processes and send their output to the host. > - The Daytona SDK can close a log socket while the remote command still runs. > - The driver treated a clean socket close as completion before it had a command exit code. > - This pull request recovers log observation for the same command and waits for a recorded exit. > - The host keeps receiving new output without a second command dispatch. ## Linked Issues or Issue Description **What happened?** A clean close of the Daytona session log WebSocket resolves the SDK callback promise. If the command still runs, the driver returned `exitCode: null` with `timedOut: false` after a short status check. A streamed ACP bridge can then report a process disconnect. **Expected behavior** A log socket close must not complete a running command. Recovery must preserve new output, the caller's lifetime controls, and one command dispatch. **Steps to reproduce** Use the callback form of `getSessionCommandLogs`. Let that promise resolve while `getSessionCommand` still has no exit code. Keep the command running, then expose its final logs and exit code. The new regressions exercise this sequence, including streams that run longer than the provider operation timeout. Related: #11021, #11049. #14485 covers input delivery retries, which are a separate transport path. ## What Changed - Require a recorded command exit after a clean log-stream close. Reconnect once, then read status and full log snapshots at most once per second. - Forward new output during recovery. Remove replayed prefixes and reconcile a final snapshot so bytes written after socket close are retained. - Hold a trailing UTF-8 replacement suffix until replay or completion resolves it. This handles the SDK decoder flush when a socket closes in the middle of a character. - Preserve healthy initial and reconnected stream lifetimes. Bound each recovery read. Preserve the existing fallback timeout budget after rejected stream attempts. - Retain partial output on timeout. A log-observation timeout reports an unconfirmed result and preserves any observed exit code in metadata; it does not synthesize successful completion. ## Verification - `pnpm exec vitest run --config packages/plugins/sandbox-providers/daytona/vitest.config.ts`: 335 passed, 14 gated tests skipped. - `pnpm exec vitest run --project @paperclipai/plugin-daytona`: 335 passed, 14 gated tests skipped. - `pnpm exec tsc --noEmit -p packages/plugins/sandbox-providers/daytona/tsconfig.json`: passed. - `pnpm exec tsc -p packages/plugins/sandbox-providers/daytona/tsconfig.json`: passed. - `pnpm --workspace-concurrency=1 -r typecheck`: passed. - `CARGO_BUILD_JOBS=2 pnpm --workspace-concurrency=1 -r build`: passed. - `pnpm test:run`: exited with failure after 845.77 seconds. The server phase reported 43 failed files, 529 passed, and 163 skipped; 14 failed tests, 9,122 passed, and 5,599 skipped. All failure entries were traced to local PostgreSQL startup/cleanup errors or ten macOS skill-cache rename errors. The package helper restored 17 missing PostgreSQL library links; the four sequencing/migration tests and fourteen native-workspace-finalizer tests then passed. The ten cache failures match clean-base evidence with identical source/test blobs. This is not a full-suite pass; later local test groups did not run. PR CI supplies the complete check result. - Regressions cover clean and rejected stream recovery, two hour-long streams with a five-minute operation budget, live fallback output, one dispatch, delayed final output, stale snapshots, SDK UTF-8 decoding, bounded observation, and timer cleanup. - `git diff --check` and a local diff scan for secrets and private identifiers passed. - Greptile reviewed head `293c4dbe67` at 5/5. Both prior findings are fixed, both threads are resolved, and no new actionable findings remain. ## Risks - The SDK returns full snapshots with no offset API. After both stream attempts end, polling bandwidth grows with retained output. The one-second cadence limits request frequency. - The SDK callback stream has no cancellation handle. Existing caller stop logic and provider/session teardown still own its lifetime. Late callbacks from a settled stream are ignored. - A successful status read with no exit code keeps recovery active under the existing caller guard. A failed read stops recovery; it is not retried indefinitely. - No command replay, provider API change, schema migration, or runtime timeout policy change is included. ## Model Used OpenAI GPT-6 through Codex, with tool use and independent code review. The exact serving model identifier is not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [ ] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Devin FoleyandPaperclip
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4b9a6000f7 |
Add bounded evidence for directory lock timeouts (#14787)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Agent files use directory locks during collection and cleanup. > - A lock timeout can fail finalization after the model turn completes. > - The timeout currently identifies no owner state or waiting operation. > - This pull request adds bounded evidence to the existing run failure report. > - Operators can distinguish a known local holder from a possible old lock without changing lock safety. ## Linked Issues or Issue Description **What happened?** A directory lock timeout does not distinguish active local work from an owner record left by an earlier process. The stored execution stage can also precede the cleanup operation that failed. **Expected behavior** The failure report should identify the waiting operation and expose bounded ownership clues. It must preserve the timeout and keep unknown ownership protected. **Steps to reproduce** Hold a directory merge lock while a second caller reaches its acquisition deadline. The regression tests exercise a live holder and an older owner record with a live PID. Related: #9667 proposes stale-lock recovery under a single-server assumption. This change only adds evidence and does not adopt that assumption. #14575 and #14665 add other run failure diagnostics. ## What Changed - Record lock owner state, capped age and wait duration, same-process and process-age comparisons, and whether this module holds the lock. - Label agent-directory release, collection, checkpoint, and warm handoff timeouts with a fixed operation code. - Validate each field before the existing event-local Sentry report accepts it. Exclude owner records, PIDs, paths, and absolute timestamps. - Limit the extra diagnostic owner read to 100 ms with best-effort abort; malformed JSON is `invalid` and unreadable owner records remain `unknown`. - Document the diagnostic limits and verify that contenders never reclaim protected locks. ## Verification - Focused lock, diagnostic, real Sentry SDK, and database-backed agent-directory tests: 126 passed, including stalled-read and malformed/missing/unreadable-owner regression coverage. - Final revision `0691613dcc`: all 54 reported checks successful, with two intentionally skipped Storybook checks. Greptile: 5/5, zero unresolved review threads; no merge conflicts. - `pnpm -r typecheck`: passed. - `pnpm build`: passed. - `pnpm test:run`: complete suite coverage ran with the existing repository shard flags: four general-server shards, four serialized shards, two general-workspaces-a shards, and general-workspaces-b. The full run is not green because of the base failures below. - The broad run found 13 failures in the unchanged macOS skill-cache tests. All 13 reproduce on the clean base revision. Open PR #14290 covers that existing failure. - Two unchanged CLI archive tests hit their five-second limits during the broad run; all 17 tests in that file pass on recheck. A CLI auth socket error also cleared on recheck (19 tests), and its full serialized shard passed on rerun. ## Risks This is a diagnostic change, not a stale-lock fix. Owner observations can race with release. Wall-clock shifts can affect the age comparison. A local-holder flag covers only this module instance. None of these fields authorizes reclamation or proves a file save. Lock acquisition, release, retries, task status, and recovery guards retain their current behavior. No schema change or deployment action is required. ## Model Used OpenAI Codex, based on GPT-6, with code execution and repository tools. The exact model build and context window were not exposed to this agent. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [ ] I have run tests locally and they pass (focused checks pass; existing base failures are documented above) - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Devin FoleyandPaperclip
|
98d8a6ccac |
Stop replaying ambiguous database disconnects (#14773)
## Thinking Path > - Paperclip stores agent work and control state in PostgreSQL. > - Its database client must not repeat a mutation after an uncertain result. > - The global retry wrapper treated `write CONNECTION_CLOSED` as proof that PostgreSQL never received a statement. > - postgres.js also uses that message when the connection closes after statement delivery. > - This pull request removes that global replay and tests the actual driver over a local wire connection. > - Callers retain control of retries when they can prove the complete operation is idempotent. ## Linked Issues or Issue Description Follow-up to #13417. Preserve the transaction disconnect handling from #13643 and the explicit actor synchronization retries introduced in #12773. Searched open and closed issues and PRs for database retries, disconnects, and `CONNECTION_CLOSED`. The open circuit-breaker proposal #11142 addresses outage queue growth; it does not establish whether an already-sent statement can be replayed. **What happened?** The database wrapper replayed an arbitrary statement up to three times after `write CONNECTION_CLOSED`. The driver adds `write ` to connection-close errors even after the peer receives the statement. A local protocol peer receives the same submitted INSERT three times when it drops each response. A committed write could therefore execute more than once. **Expected behavior** An ambiguous statement result must fail without automatic replay. A subsequent operation must be able to reconnect. **Steps to reproduce** Run the new wire regression against the parent commit. The six Simple Query cases and the parameterized Drizzle case receive three executions instead of one. The named prepared-client case was already safe and stays covered. The peer reads the entire statement and then closes the connection. This demonstrates repeated delivery with the real driver; it does not claim that a historical incident duplicated a committed write. **Paperclip version or commit** Reproduced on source commit `018993140f` with the patched postgres.js 3.4.9 dependency. **Deployment mode** Built from source with a local PostgreSQL protocol peer. No live provider or customer database is used. ## What Changed - Pass the original postgres.js client to Drizzle and remove the global statement replay wrapper. - Add eight wire regressions: six Simple Query cases for INSERT, side-effect-capable SELECT, and a data-changing CTE, plus parameterized Drizzle and named prepared-client cases. The extended peer processes Parse, Describe, Bind, and Execute, verifies bound parameters, and drops the response only after Execute. Each case checks one delivery and recovery on a fresh query. - Document ambiguous outcomes and the retry compatibility tradeoff. Keep explicit idempotent actor-sync retries and disconnected-transaction handling unchanged. ## Verification - Before the fix: the six Simple Query cases and the parameterized Drizzle case failed with three executions instead of one. The named prepared-client case was already safe. All eight wire cases pass on this branch. - Final focused client, pool teardown, configuration, and actor-sync retry checks: 28 tests passed. `pnpm --filter @paperclipai/db typecheck` also passed after the test-only follow-up. - First implementation head, `pnpm exec vitest run --project @paperclipai/db`: all 158 tests passed across 45 files, including real PostgreSQL transaction/reserved-connection recovery. The local embedded dependency's symlinks were hydrated before this run. - `pnpm -r typecheck`: passed. - `pnpm build`: passed. - The complete local `pnpm test:run` did not finish; no complete local suite pass is claimed. All CI test, typecheck, and build gates passed on the first implementation head `11f8b22d90`. Final-head CI is pending after the test-only follow-up. - `git diff --check`: passed. Reviewed the diff for secrets, personal data, generated output, and run artifacts. ## Risks Some transient statement failures that the global wrapper previously replayed now reach the caller. Operation owners must retry only when they have an idempotency guarantee or a durable receipt that prevents duplicate effects. A connection error is not proof that a write failed to commit. There is no SQL-text retry heuristic, new suppression, schema change, or migration. This change prevents unsafe replay; it does not prevent network disconnects. ## Model Used OpenAI Codex / GPT-6, with reasoning, repository inspection, code execution, and local protocol tests. The exact backend model ID and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Final verification (September30): every final-head CI check passed at `3004c5bda39c985c3557547ec45e33870ce5d010`. Greptile scored5/5 on this head, all review threads are resolved, and the branch is mergeable. Eight real-wire regressions cover simple, parameterized Drizzle, and named prepared queries. Full local suite did not produce a completed result; the complete CI matrix passed. This public PR remains open for maintainer merge. --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
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2ea54f2c3f |
fix(runner): bind transitive Copilot permission policy sources
Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
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eeb48425ee |
fix(runner): bind transitive Copilot permission policy sources
Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
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fcf1866928 |
fix(runner): bind Copilot permission grants to visible targets
Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
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fa8642d1eb |
test(runner): gate installed package staging regressions
Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
|
9661dd6473 |
fix(runner): stage installed dependency pack inputs
Preserve non-bundled package contents outside the pnpm tree before npm packs them. Keep bundled and root-package behavior and clean-consumer assertions unchanged. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
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3eeaf69a96 |
test(runner): capture warm attach evidence before epoch rotation
Observe the retired authority at its durable prepared commit rather than the later attach observer. Add a forced post-activation lost-ACK observer regression while preserving event, ACK, identity, process, and cleanup assertions. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
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03090216b7 |
fix(runner): bind Copilot permission grants to visible targets
Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
|
33f2b3a159 |
fix: separate GitHub tools and code review bot connections (#14750)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The Connectors catalog lets people give agents tools or connect agents to conversations. > - GitHub put these two uses behind one card and an extra choice. > - People should choose the connection they need from the catalog. > - This pull request keeps GitHub for tools and adds GitHub Code Review Bot as a separate card. > - Each card opens its setup directly. Both use the existing connection code. ## Linked Issues or Issue Description **What existing behavior does this improve?** GitHub connector discovery and setup. **Current behavior** With chat connectors enabled, GitHub opens a menu that asks whether to use tools or create a bot. Saved tools and bots share the same catalog entry. **Proposed behavior** GitHub opens tool account access. GitHub Code Review Bot opens agent selection. Saved bots and drafts appear under the bot card. Chat-disabled instances show only GitHub tools. **Reason and benefit** The catalog names the two uses and removes an extra setup choice. The bot keeps the existing GitHub provider, credentials, endpoint IDs, setup steps, and runtime. **Additional context** Related work: https://github.com/paperclipai/paperclip/pull/12843 and https://github.com/paperclipai/paperclip/pull/14594 established GitHub account identity. This change preserves that tool flow. No duplicate catalog split was found. ## What Changed - Split the generated app definitions into GitHub tools and GitHub Code Review Bot. Reuse the existing GitHub logo and channel method. - Open bot setup directly, including old resume and reconnect links. - Put existing bot endpoints and drafts under the bot card. Hide duplicate internal chat applications. - Keep pasted GitHub URLs mapped to the tool connection. - Add seven Storybook states for the catalog, saved connections, disabled chat, both setup paths, mobile, and light mode. - Fix narrow-screen bot rows so the label cannot overlap status and setup actions. - Update catalog, route, browser, and API tests, plus the GitHub connector guide. ## Verification - [Hosted Storybook](https://d1p6rlowie26tp.cloudfront.net/storybook/branches/codex~2Fgithub-review-connection/?path=/story/connections-github-and-code-review-bot--catalog): seven states built from this branch. The deployment passed its public-file verification. - All GitHub checks pass on `d13a2cd53561645bb2a15c6f8e75a61a936d6459`. Two optional Storybook jobs skip under their normal trigger rules; the manual Storybook deployment passes. The branch has no merge conflicts. - Greptile: 5/5 on the current head, with no review comments or unresolved threads. - `pnpm -r typecheck`, `pnpm build`, `pnpm check:token-gates`, and `pnpm build-storybook` passed. The final Storybook fixture also passed UI typecheck and the hosted build. - Targeted catalog, URL matching, routing, grouping, brand, and chat UI contract tests passed. - GitHub provider browser tests: 2 passed. These cover direct tool setup and the bot setup and management lifecycle with provider responses mocked. - Embedded-browser test on an isolated local instance: opened both cards, selected an agent, saved a bot draft, and resumed the same endpoint under the bot card after a reload. - Storybook Tool Setup and Bot Setup assertions pass in the published preview. Chat Disabled assertions pass locally. Inspected mobile and light mode, including the draft-row layout and official GitHub marks. - Local full-suite limitation: `pnpm test:run` was not clean. A cross-company route assertion failed in the aggregate run and passed in isolation; a workspace-runtime test reached its 30-second hook timeout. Some isolated database reruns skipped when the embedded-PostgreSQL availability probe failed. The local aggregate was stopped after CI completed. The corresponding full CI suites pass all 360 tool-access tests and all 162 workspace-runtime tests. - No live GitHub authorization or installation was performed. The isolated instance correctly stopped at the cloud enrollment or public HTTPS prerequisites. ## Risks - Low scope: catalog presentation and routing change. There is no database migration or provider credential change. - Existing GitHub bot URLs now open bot setup directly. The tool route remains `/apps/connect?source=github`. - The bot remains behind the existing chat-connectors feature flag. Existing endpoints retain `provider: github`. - Channel applications are represented by endpoint rows. Regression tests cover legacy bot applications, tools, active bots, and drafts together. ## Model Used OpenAI GPT-6 through Codex, with reasoning, code execution, and embedded-browser tools. The exact deployed model ID, context window size, and reasoning setting are not exposed to this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
|
018993140f |
feat: let agents name prompt-only tasks (#14761)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Users create tasks with a title and a description. > - A required title adds work when the prompt already explains the request. > - An agent can name the task once it reads that request. > - This pull request accepts prompt-only tasks and starts them with a short prompt slice. > - A scoped title tool lets the assigned agent replace that slice early without changing execution state. > - A live browser eval checks the real agent call, saved title, audit entry, and preservation of user titles. ## Linked Issues or Issue Description **Subsystem affected** Cross-cutting: task creation, shared contracts, database, server, runner tools, and board UI. **Problem or motivation** Users must currently write a title before they can submit a detailed task prompt. The agent has enough context to write a useful title itself. **Proposed solution** Make the title optional when a description is present. Save the first 120 characters of the normalized prompt as a provisional title. Ask the assigned agent to call `set_task_title` early. Use an atomic provisional-title guard to preserve titles supplied or edited by users. Keep explicit titles supported. Related: #14543 and #14556 concern empty-title submission. This change intentionally enables that submission when a prompt is present, instead of requiring a title. ## What Changed - Add the `titleNeedsGeneration` field with an idempotent migration. Keep existing titles unchanged. - Add `PUT /api/issues/:id/title` and the native and legacy `set_task_title` tool. Enforce company access, active-run ownership, shared, bounded retry receipts across native/HTTP calls, and transactional audit logging. Refresh external-object links after commit, with the same feature gate and plugin detectors as ordinary title edits. - Add early naming guidance in Standard, Ask, and Plan task context. Preserve the description, status, and assignment. - Allow prompt-only root and child task creation, plus draft restoration in the New Task dialog. Keep user titles supported. - Add an opt-in Product E2E suite for prompt-only Standard and Ask tasks, plus an explicit-title control. It checks actual provider calls within the first five tools, persisted state, audit attribution, and the reloaded UI. - Preserve a closed vocabulary of API key maintenance phrases in declared prose while rejecting opaque credential suffixes. Add one bounded naming retry after wording is rejected, without treating the rejected call as a saved title. - Repair the native cleanup receipt check exposed during full verification: accept matching input digests, retain legacy input checks, and reject conflicting receipts. ## Verification - Live Product E2E on `f43478473800e3a46b85c5ee79677efdb15108e7`: **3/3 passed** with native Codex `gpt-5.4-mini`, first attempts only, automatic retries disabled. Standard and Ask each saved “Rotate expired API key” on their first tool call, with matching persisted state and a single same-run audit entry. The explicit-title control retained its user title with zero title writes. All three verified the reloaded browser UI. - Campaign: `local-2026-09-30T21-30-11-021Z`. Earlier failed campaigns are retained separately; they exposed credential-prose handling and prompted the naming recovery fix. No failed result was regraded or deleted. - Reproduce with `pnpm test:e2e:runner -- --id task-titles.runner-codex-mini.local.prompt-title-standard --id task-titles.runner-codex-mini.local.prompt-title-ask --id task-titles.runner-codex-mini.local.preserve-explicit-title --max-automatic-retries 0` and an authorized provider key. - Full `pnpm -r typecheck` and `pnpm build` passed on the latest commit. The runner build used the configured external eval source tree. - Product E2E unit suite: **61 files, 818 tests passed**; E2E typecheck and UI token gates passed. - Title API/native regressions cover prompt-only and explicit child creation, user edits, ownership/company isolation, external reference refresh, cross-surface retry replay, and the 64-key limit without receipt eviction. All passed. Prompt-context coverage: **44 tests passed**. - Rust credential regressions: **35 tests passed**, including benign maintenance qualifiers and opaque credential rejection in every declared prose field. Catalog/report reconciliation: **28 tests passed**. Native recovery: **560 tests passed**. - Broad local `pnpm test:run`: **14,555 tests passed** in the general server group; two suites failed to initialize embedded PostgreSQL and the existing 40,000-file Git streaming stress test exceeded its 300-second macOS timeout. All three suites then passed in isolation (**5 tests passed**) without code or timeout changes. The original full local command exited nonzero and is not being represented as a clean full run. - Latest-head GitHub checks are green: **53 passed, 4 skipped, zero failed or pending**, including all test shards and the canary packaging dry run. Greptile reviewed the same commit at **5/5**, with zero unresolved review threads. ## Risks - The additive database field must reach the server and UI together. The migration uses `IF NOT EXISTS` and defaults existing tasks to a final title. - Title generation depends on the assigned agent running. Tasks without a run keep their provisional title. - Live qualification covers the native Codex path in Standard and Ask modes. API/legacy and Plan behavior have deterministic coverage. - The credential-prose exception validates the entire suffix against a closed maintenance vocabulary. Unknown suffixes, assignments, quoted values, credential prefixes, and diagnostics retain strict checks. ## Model Used OpenAI Codex, based on GPT-6, with reasoning, tool use, and code execution. The exact deployment ID and context window are not exposed in this session. The live eval uses the native Codex `gpt-5.4-mini` profile. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Devin FoleyandPaperclip
|
d6d67b00d3 |
Prevent background workspace scans from refreshing the Git index (#14666)
## Thinking Path Paperclip runs background workspace scans alongside real Git writers. `git status` can refresh the index as an optional side effect, taking a lock that makes another operation fail. Disable optional locking in the shared scan subprocess so background observation does not compete with workspace updates. ## Linked Issues or Issue Description **What existing behavior does this improve?** Workspace Git scans used by changed-file browsing, cleanliness guards, and sandbox snapshots. **Current behavior** The scan process inherits Git's default optional-lock behavior. Even a clean `status` can rewrite stale stat-cache entries in the index and contend with a concurrent writer. **Proposed behavior** Always set `GIT_OPTIONAL_LOCKS=0` for the shared scan subprocess while preserving the selected environment and Git's required write locks. **Reason and benefit** Background reads stop creating avoidable index contention. Git documents this behavior and recommends disabling optional locks for background status: [background refresh](https://git-scm.com/docs/git-status#_background_refresh). **Breaking changes** None to scan results or required write locking. Later scans may repeat stat checks that would otherwise have been cached in the index. Related scan implementation: #11572, #14253. This avoids one known contention source; it does not identify every historical lock owner or repair abandoned locks. ## What Changed - Disable optional locking at the shared scan subprocess boundary, including explicit caller environments. - Test a clean status against a deliberately stale index and prove an ordinary status would rewrite it. - Test tracked/untracked results with an existing index lock, preservation of that lock and working files, and continued rejection of a mandatory-lock write. - Document the scan behavior and performance tradeoff. ## Verification - Focused stream, workspace-sync, and scheduler suites: 63 tests passed. - Full `pnpm -r typecheck` and `pnpm build` passed locally. Final head `effe6420c77bd18d36af6b093db3a564c04b8b38` passed all 53 CI checks, including complete test coverage, typecheck, build, and browser/runner gates; two unrelated checks intentionally skipped. - Full local test attempts initially had missing embedded-Postgres library symlinks; the dependency setup was repaired. Duplicate local full-suite runs were stopped after full CI completed. This PR does not claim a completed full local suite. - Review regression: real Git honors the supplied `GIT_CONFIG_*` setting and the input environment remains unchanged; all four direct subprocess cases passed. - Reviewed the diff for secrets, customer data, and internal references. ## Risks Low risk. Disabling optional index refresh can repeat filesystem stat work on later scans. Required locks remain enforced; no lock is removed, no failed reset is retried, and workspace mutation guards are unchanged. No schema changes. ## Model Used OpenAI GPT-6 via Codex, with repository inspection, code execution, and tests. Exact model build identifier is not exposed by this session. ## Checklist - [x] Thinking path and model are specified - [x] Checked ROADMAP.md; this is a maintenance correction, not planned feature work - [x] Searched for duplicate and related PRs - [x] Described the issue using the enhancement template - [x] No internal issue references, customer data, or private instance links - [x] Descriptive branch name - [x] Focused regression tests pass - [x] Added tests and updated documentation - [x] Risks documented - [x] Required validation and CI gates are green (full suite validated in CI; local scope documented above) - [x] Greptile is 5/5 with no unresolved findings - [x] I will address review comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Devin FoleyandPaperclip
|
0ea6b10967 |
Record ACP activity and workspace restore failure evidence (#14665)
## Thinking Path Paperclip records terminal run failures for operators. A timeout's own log and cleanup output update the run's last-output timestamp, so that timestamp can make a long-silent provider look active. Snapshot runtime activity before finalization and include the saved workspace restore classification to make the next failure actionable without copying tool payloads. ## Linked Issues or Issue Description **What existing behavior does this improve?** Terminal run diagnostics in the existing opt-in Sentry integration. **Current behavior** Reports cannot distinguish runtime events from finalization logging and omit the already-persisted workspace restore code. A later successful run also does not establish that earlier workspace files were restored. **Proposed behavior** Record runtime-event age/count and pending-tool inventory at finalization, before status reads and cleanup. Forward only finite counts, a completeness boolean, and known restore codes through the existing reporter. **Reason and benefit** Operators can distinguish a silent turn with unfinished tools from recent runtime activity and see restore failures without retrieving private run output. Neither signal certifies productive work or successful recovery. **Breaking changes** None. Error grouping, execution deadlines, cancellation, recovery policy, and the Sentry opt-in remain unchanged. Related diagnostic work: #14573, #14575, #14639. ## What Changed - Snapshot ACP activity before success/failure finalization, including thrown relay failures. - Forward bounded numeric/boolean evidence and shared workspace restore codes; exclude commands, tool IDs, paths, and arbitrary result data. - Document limitations and test silence, empty streams, timeout, cleanup delay, incomplete tool inventory, and privacy. ## Verification - `pnpm -r typecheck` passed after the final implementation. - Changed suites: 252 tests passed; all 29 database reporter tests subsequently passed after restoring the embedded-Postgres package library symlinks. The migration test also passed (30 database cases total). - `pnpm build` passed during implementation. Final head `fe78dba6f592b1abccac7cdbf341bd2e0b0d30cb` passed all 53 CI checks, including complete test coverage, typecheck, build, and browser/runner gates; two unrelated checks intentionally skipped. - Full local test attempts initially hit missing embedded-Postgres library symlinks; the dependency setup was repaired and database tests passed. Duplicate local full-suite runs were stopped after full CI completed. This PR does not claim a completed full local suite. - Review regression: completed, failed, and cancelled tools are excluded from the pending count; focused activity/timeout tests and adapter-utils typecheck passed. - Reviewed the diff for secrets, customer data, and internal references. ## Risks Low risk, diagnostic-only. The existing tool inventory is incomplete for some runtime events, so the report carries its completeness flag. Event age is measured at finalization and does not prove useful work or identify the underlying provider failure. No schema changes or new capture gate. ## Model Used OpenAI GPT-6 via Codex, with repository inspection, code execution, and tests. Exact model build identifier is not exposed by this session. ## Checklist - [x] Thinking path and model are specified - [x] Checked ROADMAP.md; this is a maintenance correction, not planned feature work - [x] Searched for duplicate and related PRs - [x] Described the issue using the enhancement template - [x] No internal issue references, customer data, or private instance links - [x] Descriptive branch name - [x] Focused regression tests pass - [x] Added tests and updated documentation - [x] Risks documented - [x] Required validation and CI gates are green (full suite validated in CI; local scope documented above) - [x] Greptile is 5/5 with no unresolved findings - [x] I will address review comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
|
ad55d0a281 |
fix(connections): repair personal credentials and request write access (#14739)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Agents use Apps through a gateway that checks identity, company access, and action policies. > - Personal pasted credentials can point to company secrets. Setup can show success while the gateway rejects every call. > - Several OAuth methods also omit the scopes needed for their supported write actions. > - This pull request gives setup, health checks, and invocation the same credential rules. Owners repair existing connections by reconnecting. > - New connections request reviewed permissions for their supported actions. Read-only choices remain available under Advanced. > - Agents can use the connections people give them, while existing consent, identity boundaries, and action restrictions remain enforced. ## Linked Issues or Issue Description Refs #14009 and #14008. This addresses the personal-credential defect. The separate GitHub organization-identity selection defect is outside this change. Related work: #13942 fixed part of new personal-key setup. #14200 independently fixes legacy personal reconnect and protects managed-agent profile credentials during removal. This PR covers that ownership invariant across key and secret-URL setup, reconnect, health, discovery, and invocation, and keeps owner reconnect as the repair path. #14059 tracks requested versus provider-asserted OAuth scopes; it remains separate work. I searched open PRs and issues for Zapier, Airtable scopes, connector writes, and personal credential failures. **What happened?** A Zapier secret URL saved through personal setup can become a company secret referenced by a user grant. Health checks bypass the gateway's ownership check, so the connection appears healthy but calls fail with `grant_credential_invalid`. Custom-header paths can also receive a duplicate `credentials.` prefix. Omitted OAuth scopes make write access depend on provider defaults. **Expected behavior** Personal invocation credentials belong to the selected user. Setup, health, and actual calls enforce the same rule. New connections request documented permissions for supported read and write actions. Existing tokens gain no permissions without provider consent. **Steps to reproduce** 1. Connect Zapier or a generic secret URL with the personal identity. 2. Allow an agent to use the connection and complete setup. 3. Invoke a tool through a run-scoped gateway. The legacy layout fails ownership validation despite successful setup. **Paperclip version or commit** The implementation started from `44736c9c7c67b7b646ead9d51721db10f5b83835` and was rebased onto master at `94e8dec56`. **Deployment mode** Built from source. Regression tests use isolated PostgreSQL fixtures and controlled MCP transports. ## What Changed - Share credential writing, ownership validation, and canonical paths across initial setup, resume, reconnect, rotation, health, discovery, and gateway calls. Keep OAuth client-registration secrets separate from invocation credentials. - Existing personal connections with company-scoped credentials require owner reconnect with a fresh key or secret URL. Reconnect creates a correctly owned value and updates the existing grant and declarations. There is no automatic ownership backfill or new startup hook. - Preserve PostgreSQL timestamp precision when reconnect checks whether a grant changed. Previously, converting the timestamp to a JavaScript Date could reject reconnect with a false concurrent-change error. - Protect credentials used by other grants, connections, bindings, managed-agent profiles, routine triggers, or secret proposals from connection removal. - Review all 117 tool methods, including 84 OAuth methods. Record explicit scopes or documented provider-default exceptions with official evidence. Add Airtable's seven scopes, Hugging Face repository/job scopes, and other documented MCP permissions. - Prefer available write-capable methods. Put explicit read-only choices under Advanced. Explain pasted-key permissions and offer reconnect for missing OAuth consent. Preserve existing grants, policies, Google availability gates, and curated scope allowlists. - Reconnect generic secret URLs and custom headers using their stored credential fields. Refresh the catalog after setup, correct reconnect feedback and error guidance, and let Cancel exit invalid setup while Save & exit retains draft-saving behavior. - Apply ownership checks to the new GitHub repository/skill connection picker. Align the permission audit with the Google scope reductions merged on master. - Add run-scoped gateway, ownership, owner-reconnect, OAuth URL, insufficient-scope, UI, and catalog-wide regression coverage. Update the connector playbook and permission audit. ## Verification Latest commit `97bc0b86e0eae0ec892e4ac44beff1a66164b20e` passes all CI/status gates (55 completed check runs, no failures or pending checks) and has a completed Greptile review at **5/5 with no outstanding findings**. GitHub reports the PR as mergeable/CLEAN. - **Embedded browser:** used the actual server and built UI from this worktree, a fresh isolated database, and local HTTP MCP fixtures. Completed personal bearer-key, secret-URL, and custom-header setup; reproduced the legacy ownership failure; reconnected through the owner’s form; and completed writes afterward. Read-back was verified for bearer-key and secret-URL connections. Public organization-wide setup appeared immediately in Browse without reload. Zapier URL validation/Cancel and Google’s enrollment gate were also exercised. - **Persistence and invocation:** verified user ownership, canonical `credentials.authorization` / `remote.url` / `headers.X-Api-Key` declarations, and unchanged connection/grant identity. The old company secrets retain their ownership. Separate HTTP calls through an actual run-scoped gateway session completed a write and read-back. - **Backend coverage:** the final gateway suite passes all 82 cases, including catalog Zapier and generic inline reconnect. It checks company/user isolation, canonical declarations, same-endpoint URL validation, fresh credentials, retained restrictions, and real gateway read/write execution using fixture transport. A timestamp with PostgreSQL microseconds covers the former false reconnect conflict. - **Local checks:** 368 catalog, gateway, repository, and UI tests passed before the final extra Zapier case; 49 GitHub skill access tests also passed. All three Apps browser regressions pass, including reconnect through the actual form and catalog visibility without reload. Full `pnpm -r typecheck`, `pnpm build`, server typecheck after the final patch, and token gates passed. Full tool-access service runs hit varying 15-second Google fixture timeouts; both affected cases and the updated reconnect assertion pass in isolation (3 tests). The complete test matrix passes in CI on this head. - **Verification limits:** no live provider account was available for Zapier/Airtable/OAuth consent or account-bound write proof. Public metadata and local fixtures do not establish provider consent. The original development database clone failed on a pre-existing missing `tool_connections_transport_check` constraint; browser acceptance used a fresh isolated database created by the normal CLI onboarding flow. ## Risks - Existing broken personal connections stay unusable until their owner reconnects. Health, discovery, and invocation return an actionable ownership error; startup does not rewrite credential ownership. - Scope changes affect new authorization requests. Providers may still require resource selection, account roles, paid plans, or app verification. Existing consent and action restrictions remain unchanged. - Shared credentials are retained rather than reassigned or revoked. Provider-default exceptions and unavailable live checks are documented in `doc/connections/CONNECTOR-PERMISSION-AUDIT.md`. - No new endpoint, database table, lockfile change, or CI workflow change is included. ## Model Used OpenAI Codex, based on GPT-6, with reasoning, code editing, shell execution, web research, and browser tools. The exact deployment model ID and context window were not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
|
cbd278dc03 |
fix(interactions): derive chat recipients and validate explicit users (#14742)
## Thinking Path > - Paperclip helps people manage AI agents and their work. > - Agents use saved questions to get human input and continue the same task. > - The standard question example recently told models to copy a user ID. > - A model can omit an identity prefix and create a question its intended recipient cannot answer. > - Agent Chat already knows the conversation owner, so the server can supply that identity. > - This pull request removes the blanket instruction and validates explicit recipients before saving. > - Ordinary questions stay simple, and explicit addressing remains available for decisions that need a particular person. ## Linked Issues or Issue Description Refs #14707, #14188. Related: #14238 handles legacy email recipients; this change prevents invalid recipients in new cards and retains exact ID matching. **What happened?** A model copied a Cloud user ID without its prefix into `addresseeUserId`. Creation succeeded. The intended user's answer then failed the exact recipient check. **Expected behavior** Ordinary chat questions use the saved conversation owner. A task may optionally name a specific recipient. The API rejects an unknown or unauthorized recipient before it creates a card. **Steps to reproduce** Create a chat question for a user whose ID is `paperclip-id:example`. Supply `example` as the addressee. Before this change, creation accepts the invalid recipient and the owner cannot answer. With this change, creation returns 422. Omitting the field saves the full owner ID and allows that owner to answer. ## What Changed - Remove `addresseeUserId` from standard question examples and remove the blanket requester-ID instruction. - Derive the recipient of ordinary chat questions from the persisted conversation owner. Reject conflicting explicit user IDs. - Keep explicit task recipients optional. Validate supplied user IDs with the existing board mutation policy, including company, viewer, and Cloud restrictions. - Preserve explicit agent routing, connector intents, confirmations, exact recipient checks, idempotent retries, and no-login local-board authority in local-trusted mode. - Update the blocker grader to accept an omitted recipient and verify the actual requester answered. - Add database and HTTP tests for prefixed identities, denied recipients, concurrent retries, saved answers, and response delivery. ## Verification - Database interaction service suite: 90 tests passed, including implicit local-board creation/answering and authenticated/Cloud denial. - Interaction HTTP route suite: 84 tests passed. - Affected interaction/native/connector/documentation suites: 231 tests passed across six files after valid-user fixtures were updated. - Resolver and interaction unit suites: 29 tests passed. - Product E2E unit/calibration suite: 793 tests passed; Product E2E typecheck and blocker catalog discovery passed. - Generated API-reference and capability contract checks passed. - `pnpm -r typecheck` and `pnpm build` passed. - Full local `pnpm test:run` did not finish green: its initial general-server pass had 14,416 passing assertions, one unrelated native-resume assertion failure on macOS, and three teardowns from an intermediate fixture cleanup fixed above. Separate broad local groups also encountered timeout/live-port failures under host load. Local UI (7,026), CLI (502), shared (817), and skills-catalog (20) tests passed; the complete final-head CI matrix is the broad verification gate. - After two CI cold-start readiness timeouts, a separate test-only commit gives the first exposure lifecycle fixture the existing normal 30-second readiness budget. Its real HTTP, ordering, and cleanup assertions remain intact; the targeted case and final Linux CI shard passed. Production deadlines are unchanged. - A separate OpenCode fixture failed twice on GitHub-hosted Ubuntu because its cached Node executable was group-writable; the same case passed on AWS runners. The fixture now qualifies its own Linux copy with mode `0500` and the actual copy digest. Host files and production security checks are unchanged. The focused macOS case passed; the new Linux-copy branch also passed on the final AWS-hosted Linux runner (1,125 passing Runner tests, 3 skipped). The final run was not on a GitHub-hosted runner. - Final-head [CI run 36762078176](https://github.com/paperclipai/paperclip/actions/runs/36762078176) passed for `116b968b24fa0a8c5724a7bf96e73a8dda5f0425`: 54 successful checks and two conditional Storybook skips, with no pending or failed checks. The 27 general/serialized test jobs reported 28,635 passing tests. Typecheck, build, Runner, browser E2E, and Canary gates passed. Greptile reviewed that exact head at 5/5; both review threads are resolved, with no open follow-ups. - No live provider replay is claimed by this PR. ## Risks - New explicitly addressed cards reject users who cannot mutate the issue, including viewers, inactive members, and invalid IDs. Callers that supplied invalid recipients must correct their request. - Existing addressed cards are not rewritten. Existing authorization checks remain strict. - Chat inference applies only to questions without an agent addressee. Connector intents and governed confirmations retain their own recipient paths. - No schema change or migration is required. ## Model Used OpenAI Codex, GPT-6 (exact serving variant and context window are not exposed in this environment). Used reasoning, tool use, code editing, and test execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
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b54b2dc35c |
fix: preserve warm Codex turns with incremental managed file checkpoints (#14735)
## Thinking Path > - Paperclip manages AI agents and keeps their instructions and files durable. > - Native Codex runners can keep a process alive between compatible turns. > - Managed file collection stopped that process after each turn, which defeated warm reuse. > - Agent folders can contain large images and other files, so full copies on every turn are expensive. > - This change keeps one managed directory for the live session and saves only file changes after each turn. > - Ownership, authorization, instruction changes, and process retirement still control when reuse is safe. ## Linked Issues or Issue Description Related: #13710 introduced native warm session reuse. This fixes managed file collection that still forced those sessions to stop. No duplicate open PR or issue was found. **What happened?** With managed instructions and warm native Codex enabled, consecutive turns reused a Daytona sandbox but started a new runner process each time. The managed directory collector required process termination before saving files. **Expected behavior** Compatible turns keep the same process and managed `AGENT_HOME`. Each completed turn saves added, changed, and deleted files before the next turn starts. Unchanged large files do not transfer again. **Steps to reproduce** 1. Use a native Codex agent with managed instructions and a reusable Daytona environment. 2. Enable warm session reuse and run three turns on the same task. 3. Write a large binary on the first turn, edit a small note on each turn, and delete a file on the second turn. 4. Compare process identity across turns and read the canonical files through the public agent-files API. **Paperclip version or commit** Reproduced on `d30b03bd8c17604cdab1533eeeeb087aba30e8b1`. **Deployment mode** Local server with remote Daytona execution; cloud native runner uses the same path. ## What Changed - Retain the managed directory only for the verified owner of a live native Codex session. - Checkpoint each completed turn before releasing the session for reuse. Retry unstable captures, then stop and collect when a warm checkpoint cannot be validated. - Compare metadata and cached hashes, stream only changed file payloads, record deletions, and validate path, content, quota, and authorization before saving. - Rotate sessions when canonical files, loaded instructions, credentials, or launch policy change. Fence stale collection and cleanup callbacks from later owners. - Keep cleanup and recovery aware of the current session owner. Recheck canonical files under the writer lock at handoff, attach the successor collector before fallible bookkeeping, and emit one final save receipt on checkpoint fallback. Preserve storage warnings across unchanged checkpoints. - Add regression coverage and a three-turn Daytona test with independent public API file checks, an unchanged 8 MiB binary, deletion checks, and strict process identity checks. - Document checkpoint consistency, lifecycle behavior, and local run-log counters. - Replace a timing assumption in the Daytona teardown test with explicit transfer-arrival gates after CI exposed an unset release callback. ## Verification - Full local `pnpm -r typecheck` and `pnpm build` passed. Server checks were repeated after the final storage-warning fix. - Runner E2E typecheck and 749 runner E2E unit tests passed. - Focused file checkpoint, directory ownership, instruction collection, native session, and merge tests passed. After review fixes, the managed-directory and native-session suites passed 550 tests, including intervening canonical edits, same-run fresh restore, failed handoff collection, and one-call fallback collection. Server typecheck passed again. The Daytona plugin suite passed 218 tests. The quota-warning regression failed before the fix and passed afterward. - Three real Daytona campaigns passed before the final handoff review fixes. The latest kept PID 547 across all three turns. The first checkpoint copied 8,388,635 bytes; the next two copied 36 and 54 bytes. Public API reads verified the binary, note contents, and deletion after every turn. Test cleanup deleted the sandbox. - The final head was also deployed to an isolated cloud staging instance and passed three UI-triggered native Codex turns with managed instructions. All three retained the same process ID/start time, native session, provider session, runner instance, and Daytona sandbox. Checkpoints copied 8,388,643 bytes on turn 1, then only 52 and 78 bytes on turns 2 and 3; those warm captures also hashed only 52 and 78 bytes. Independent canonical API reads verified every byte of the unchanged 8 MiB binary and the exact note contents after every turn; the deleted file returned 404 after turns 2 and 3. After restoring the original lifecycle and agent-auth configuration, removing the temporary secret, pausing the test agent, and deleting both test sandboxes, independent canonical API reads still verified the entire binary, the final 78-byte three-line note, and the deletion. The native runner flag remained enabled and the final serving revision remained the PR head. - Two earlier staging attempts are preserved as failures and are excluded from the acceptance result: a saved ChatGPT login failed with a provider routing 401, and its subsequent stopped-sandbox retry failed before provider startup with a closed-lease admission error. The successful campaign used a fresh sandbox and a temporary encrypted API-key binding. The stopped-lease retry remains unexplained; this campaign does not establish recovery of that failed sandbox. - All [Paperclip CI gates](https://github.com/paperclipai/paperclip/actions/runs/36750397355) pass on `26ef2ef56a389259246809805c0b34a4747eb86b`, including full test partitions, build, typecheck, runner verification, E2E shards, and the Canary clean public-npm install. Greptile reviewed that exact head at 5/5 with no unresolved review threads or outstanding findings. - Full local repository coverage used the existing CI partitions, but the 40,000-file Git streaming stress test timed out and its local retry was interrupted by macOS thermal emergency sleep; this is not a green full local suite claim. The exact stress test passed on the final head in [CI server shard 2/12](https://github.com/paperclipai/paperclip/actions/runs/36750397355/job/110008294290), in 111.9 seconds. - Repeat the live test with configured credentials and a Linux runner artifact: `pnpm test:e2e:runner -- --id daytona-warm-continuity.runner-codex.daytona.warm-three-turn`. ## Risks - This is a file-level checkpoint, not an atomic snapshot of the whole folder. Background writes after a capture are saved by the next checkpoint or final stopped collection. - Metadata scans still visit all paths. Modified files transfer in full; unchanged files do not rehash or transfer. - Incorrect ownership or reuse could collect the wrong directory. Run ownership fences, current authorization, stable capture validation, and stopped collection fallbacks are covered by tests. - Warm reuse remains opt-in. No database migration or fleet default changes. ## Model Used OpenAI GPT-6 through Codex, with reasoning, code editing, tool use, and test execution. The exact serving model ID and context-window size are not exposed by this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
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d432dc7fa3 |
Add GitHub-synced skill sources (#14713)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Company skills supply instructions and files to those agents. > - GitHub imports already exist, but users cannot manage repositories as skill sources. > - Repository refresh also needs caller-authorized access and complete local packages. > - This pull request adds Sources inside Skills and reuses GitHub connections from Apps. > - Installed snapshots let agents use skills without fetching GitHub during a run. > - Manual refresh preserves skill identity and leaves failed imports on their last good version. ## Linked Issues or Issue Description **Subsystem affected** Cross-cutting: skills UI, server, database, shared contracts, and runtime materialization. **Problem or motivation** Users keep skills in GitHub repositories. They need a clear way to select, import, and refresh those skills. Existing imports do not expose repository management or consistently preserve supporting files. **Proposed solution** Add company-scoped skill sources. Browse repositories from all accessible GitHub connections, or paste a public repository or branch URL. Select whole skill packages, inspect included files and reference warnings, and install complete, immutable snapshots. Refresh each source manually. **Alternatives considered** Project repository settings hide the workflow from Skills. A second GitHub connector would duplicate credentials and grants. Upstream editing and PR creation are separate work. **Roadmap alignment** This implements the Skills Manager direction in ROADMAP.md. The maintainer requested this scope and reviewed the component and full-app journey stories before implementation. Related reports: Refs #10285, Refs #10949, Refs #13464. Related work: #14356, #13656, #9268. ## What Changed - Add source and entry records, an idempotent migration, company-scoped APIs, and legacy GitHub import adoption. - Reuse current caller grants and credential refresh. Combine and deduplicate repository inventories across accessible connections. Pasted public URLs also prefer the active user’s authorized connections. Tokens stay in the Git child environment, never argv or disk. - Fetch a shallow Git snapshot at one immutable commit. Scan the full local tree, including hidden and nested folders. Read Git objects without checkout or archive transformations and enforce nested package boundaries. - Bound Git downloads to 128 MiB and three minutes. Cancel active process groups and remove incomplete downloads. Preserve cancellation and deadlines while progress drains; close stalled HTTP progress streams after 30 seconds. Reuse caller-scoped temporary snapshots for preview/import after reauthorization. - Index repository package boundaries once and cap expanded work at 1,000 packages, 10,000 files, and 100 MiB, including repeated copies of shared blobs. Bound path depth and the shared path index. Discovery keeps audited manifests without retaining all package bodies. - Resolve moving branches before fetching so unchanged discovery reuses caller-scoped snapshots. Limit active scans, scan frequency, and new downloads per caller and company; quotas apply before metadata reads and across connections, and cached scans do not consume the download quota. - Store complete versions with script content, binary bytes, and executable modes. Preserve these through copies, runtime caches, and runner packaging. - Stage downloads before publication. Use source leases, revision checks, and transactional activity records. Keep installed versions after failures, upstream deletion, deselection, and disconnect. - Add the approved import flow, Sources page, selection tree, provenance, read-only Studio behavior, and saved return from GitHub setup. - Add package manifests, commit-pinned file previews, and separate runtime requirements and reference warnings. Supporting files are included together; nested skills remain independently selectable. Preview requests reauthorize the caller and re-audit package content. - Show installed skills as compact links beneath each source. Repository titles open GitHub. Keep Refresh, Select skills, and Disconnect source in a three-dot menu. Source rows omit the branch, imported count, and refresh timestamp; action alignment and repository titles work at narrow widths. - Stream discovery metadata over an opt-in NDJSON response. Show measured Git download progress and real package/file counts, animate newly checked skills, support cancellation, and require a complete scan before selection. Keep the existing JSON API. - Retain component stories and add a separate full-app journey story group. Include fixed progress states and interactive scan, large-repository, interruption, and saving stories. - Update Skills documentation and product contracts. Suppress private GitHub skill references in telemetry. Privacy review requested for the telemetry changes. ## Verification - Local repository typecheck, full build, token gates, and Storybook build passed during this work. Focused transport, authorization, scanner, persistence, route, and UI tests pass. The final UI refinement passes all eight focused UI tests, UI typecheck/build, and token gates. The scanner resource and repeated-discovery fixes pass 132 focused scanner, transport, authorization, source-service, route, and rate-limit tests, plus server typecheck/build. Full-suite verification comes from CI; the older full local Vitest run was stopped after unrelated chat failures and a font-test failure, all of which passed in fresh focused runs. At commit `1098d5996`, all 54 active checks pass; two optional Storybook jobs are skipped. CI covers repository typecheck, build, the full test suites, browser shards, and the canary dry run. Greptile is 5/5 with no open findings; the security scan also passes. - Adversarial scanner tests verify repeated-blob byte accounting with and without declared sizes, package/file/path caps, one-time repository indexing, metadata-only discovery audits, and nested package boundaries. Additional tests cover branch movement, snapshot reuse, caller/company quotas, isolation across connections, active-lease cleanup, quota recovery, and rejection before any metadata API call. - Real Git tests verify hidden paths, exact binary bytes, executable modes, export-ignore preservation, symlink/submodule reporting, pinned commits, caller-scoped cache reuse, cancellation, cleanup, and credential isolation. Regression tests hold both download slots with permanently blocked progress callbacks, verify timeout/cancellation cleanup and retry, and exercise HTTP backpressure cancellation. Access tests cover automatic public-URL connection selection and revoked grants. Database tests verify company and grant audiences. - Live isolated browser test: the public `anthropics/skills` scan now completes and discovers all 20 skills without connecting an account. Imported canvas-design with all 83 files, opened it from Sources, and verified the installed binary-font preview/download control. Package previews also expose the complete file inventory before import. Cancelled an active Git download and retried successfully to all 20 discovered skills; the browser displayed measured download progress. The current audits reject four other packages; eligible selections remain importable. - Browser checks verify the simplified source rows at desktop and narrow widths, keyboard navigation into the actions menu, Refresh from the menu, selection, and fixture disconnect with installed skills retained. Storybook includes a menu-open checkpoint and a 320px layout. - Storybook includes receiving/preparing download checkpoints and a timed full-app import journey, plus cancellation, retry, large-repository, and saving states. Streaming tests cover split UTF-8 frames, incomplete streams, late responses, cross-company requests, HTTP errors, and JSON compatibility. - Earlier live acceptance on this PR imported `stitch-skill` with `DESIGN.md`, assigned it to an agent, disconnected its source, and ran a successful Studio test that read both installed files. An editable copy changed independently. Both Skills variants, mobile selection, and return from GitHub setup were exercised. - Private access, revoked credentials, OAuth success return, binary/script preservation, concurrent refresh, transaction rollback, version pins, and legacy adoption have automated coverage. A real private-repository OAuth grant was not created during this test. ## Risks - The migration groups recognizable legacy imports without provider calls. Their first successful refresh completes the local package snapshot. - Reference checks are advisory. They cover Markdown links and explicit relative resource paths, not arbitrary runtime dependency graphs. Preview text is capped at 64 KiB; imported bytes remain complete. - Git must be installed on the server. Shallow fetches still download the branch snapshot, including files outside selected packages. Downloads have size/time/concurrency limits. Temporary caches are bounded and caller-scoped. GitHub API quota still applies to repository metadata and the connection picker; content no longer uses per-file API requests. Failed scans retain installed content. - Sources depend on the current caller's GitHub access. A saved connection does not grant access to another person's token. - GitHub script support and immediate manual refresh are explicit maintainer-approved requirements. The operator trusts the selected repository and accepts upstream script and executable-mode changes on refresh. Static audits are not a sandbox or a guarantee of safe code; agents may later invoke installed helpers under their runtime permissions. Import and refresh do not execute scripts, hooks, package installation, or builds. Raw URL and skills.sh imports keep their prior script restrictions. - Source originals remain read-only. Refresh affects subsequent unpinned runs; explicit pins and active runs retain their versions. - The telemetry change removes source-managed GitHub identifiers from skill-reference events. It introduces no event or field. Please review the privacy boundary. ## Model Used OpenAI Codex, based on GPT-6, with reasoning, code execution, and browser tools. The exact serving model ID and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
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25c422ba7e |
fix(apps): request minimal Google service scopes (#14740)
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work.
> - Google connections give agents service-specific tools through
governed credentials.
> - Each connection has a reviewed OAuth scope set.
> - Docs, Sheets, and Slides request Drive permissions in addition to
their own service scopes.
> - Google documents these permissions as alternatives, not combined
requirements.
> - This pull request removes those extra permissions and redundant
Calendar write free/busy access.
> - Users grant fewer permissions without adding tools or changing
connection access policy.
## Linked Issues or Issue Description
Refs #13820. Related #14739 changes other connector permissions; it does
not reduce these Google profiles.
Companion broker PR:
https://github.com/paperclipai/paperclip-cloud/pull/615. Ship the
matching changes together after fresh-grant validation.
**What happened?**
Seven Google profiles request redundant scopes. Docs, Sheets, and Slides
request Drive scopes. Calendar write requests free/busy even though
calendar.events authorizes its availability tool.
**Expected behavior**
Each profile requests only the scopes required for its reviewed tools.
Managed and customer-owned OAuth methods use the same set.
**Steps to reproduce**
Inspect the Google profile registry and the four app definitions on the
base commit. Compare their scope sets with Google's MCP authorization
alternatives linked in the updated documentation.
**Paperclip version or commit**
Base:
|
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DottaandPaperclip
|
94e8dec56b |
fix(runner): preserve tool outcomes through shutdown and restart (#14734)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The runner sends authorized tool calls to the server and saves their results. > - A provider turn can stop while a server write is still running. > - The old shutdown path invented a failed result that could conflict with the real result. > - Truncated execution input and incomplete recovery records made the failure harder to diagnose. > - This pull request preserves exact inputs and actual outcomes through shutdown and restart. > - Tests force the race and crash boundaries so safe retries do not repeat writes. ## Linked Issues or Issue Description **What happened?** Stopping a turn during a server tool call could record a false failure, then reject the actual result as a conflict. The diagnostic input formatter could truncate instruction content before execution. A crash during saved-result delivery could leave that delivery permanently indeterminate. Cleanup could hide the first failure, and a retry could overwrite earlier run logs. **Expected behavior** Keep dispatched tools pending until their actual result is known. Preserve accepted input bytes. Accept identical result delivery without failing the task. Reject conflicting results with enough evidence to diagnose them. Recover saved-result delivery without repeating the business operation. **Steps to reproduce** 1. Hold an instruction update at the filesystem commit barrier. 2. Stop its provider turn before the server returns the result. 3. Release the write, deliver its result, and replay the same result. 4. Repeat with a restart before and after the delivery receipt is saved. 5. Check that there is one write and one audit row, and that the exact result survives. **Paperclip version or commit** The change was developed from `44736c9c7` and rebased onto `0e5830887`. **Deployment mode** Self-hosted server with the native runner. Tests use local runner processes, scripted providers, and PostgreSQL. Related work: #12353 added durable semantic tool receipts; #12384 added durable Codex tool recovery; #12404 bound semantic tools to ACPX sessions. #14633 covers separate native-provider cancellation and qualification work. This PR addresses server semantic-tool outcomes and their durable delivery. No duplicate fix was found. AgentMail discovery is outside this PR. ## What Changed - Close turn admission without inventing results for dispatched tools. Keep pending calls and accept late actual results. - Accept identical result replay with a diagnostic warning. Include call identity and both result hashes in real conflict errors. - Preserve exact execution arguments. Reject prohibited or oversized input before dispatch. Keep diagnostic previews redacted and bounded. - Commit instruction-attempt evidence before the filesystem write. Save completed mutation receipts so concurrent and restarted duplicates return the first result. Recheck authorization before replay. An attempt without a completed result stays unknown and cannot execute again. Definite pre-write failures save and replay their original error without another write. - Recover an interrupted saved-result delivery only for backends with durable result receipts. Never replay an ordinary business operation with an unknown outcome. - Preserve the initiating error when cleanup also fails. Record incomplete settlement evidence. Propagate typed unknown-outcome errors through the native tool wrapper without creating a false completed tool result. - Append run-log attempts and restore the durable log before appending after local file loss. Reject incomplete restores. Publish a restored prefix only if the destination is absent so concurrent attempts cannot overwrite new lines. - Add deterministic race, crash, replay, authorization, exact-content, and log-restoration tests. Document their assertions in `packages/paperclip-runner/docs/durable-recovery.md`. ## Verification - Current head: `7e088f4c7fba8ebabf98ae95485a5753b013d489`. All 55 applicable checks pass; four conditional/manual checks are skipped. This includes build, typecheck, Rust, both runner TypeScript shards, server and workspace tests, all eight browser shards, isolated runner compilation, and the clean-install release dry run. [CI run](https://github.com/paperclipai/paperclip/actions/runs/36746101110). - Greptile reviewed this exact head at 5/5 with zero new findings. All three earlier review threads are resolved. - Focused local verification includes 11 instruction integration tests, 23 surrounding authority/tool tests, 26 run-log tests, and 169 controller/driver tests. The post-rebase controller/transport/runtime selection passed 415 tests. The full Rust release suite passed 617 tests with two ignored. The real-process SIGKILL recovery test passed three consecutive runs. - The fault matrix in `packages/paperclip-runner/docs/durable-recovery.md` uses explicit barriers, real PostgreSQL rollback, durable journal reloads, and killed runner processes. It covers late results, identical and conflicting replay, exact long content, concurrent log restoration, lost commit acknowledgements, and definite failure replay after the original CAS base becomes valid again. No paid model calls are needed. - Full local recursive typecheck and build passed during implementation. Server typecheck and the runner TypeScript build passed after the review fixes. The broad local repository test run was stopped after repeated database startup timeouts. Four timing/launch failures in an earlier broad runner run passed focused reruns without changed assertions or timeouts. These are local verification limitations; the complete current-head CI suite is green. An earlier CI workspace job received an infrastructure shutdown signal; its current-head replacement passed. ## Risks - A stopped turn can remain blocked when a dispatched operation has no proven result. The system does not guess its outcome or rerun its effect. - Conflicting results still fail settlement. Existing failed or conflicting journals are not repaired automatically. - Accepted semantic input is limited to 480 KiB of encoded JSON to fit the encrypted transport. Larger input fails before execution. - Instruction filesystem writes and database receipts are not one atomic storage operation. A separately committed attempt and audit record survive rollback. An attempt without a completed success or definite pre-write failure receipt remains blocked as an unknown outcome. It is not replayed or reported as success. - Run-log restoration now reads the durable object before appending when the local log is missing. Failed or incomplete reads reject the append. - No schema migration, dependency change, workflow change, or AgentMail change is included. ## Model Used OpenAI Codex, GPT-6, with reasoning, tool use, code execution, and test analysis. The exact served model ID and context-window size are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass (focused suites; the broad local run limitation is recorded above) - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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Nicky LeachandPaperclip
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af5c2d101c |
fix(paperclip-runner): deliver the shutdown settlement event past the terminal-turn gate (#14668)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The OpenCode driver maps provider events to runtime request events > - A provider turn can end before a pending runtime request receives its answer > - The consumer reads one turn's events and stops at that turn's terminal event > - A settlement event that arrives after that terminal event never reaches the consumer > - This pull request settles the request inside its own turn, before the terminal event > - The benefit is reliable request settlement without weakening late-frame protection ## Linked Issues or Issue Description **What happened?** A pending runtime request stayed open after an OpenCode turn failed through `session.error`. Session shutdown then dropped its settlement event as a late provider frame. **Expected behavior** The driver must deliver `runtime_request.expired` with the original `turnId` and `itemId`, inside the same single read pass the consumer performs on that turn. **Steps to reproduce** 1. Start an OpenCode turn that creates a native runtime request. 2. Leave the request pending and fail the turn through `session.error`. 3. Close the session and inspect the emitted events. **Paperclip version or commit** `22d41c6081f05658e0d7c8485d0f22f35af4a79e` **Deployment mode** Built from source with the OpenCode driver test fixture. ## What Changed - Settle a pending runtime request as soon as its own turn goes terminal, before the terminal turn event. - Add an optional `bypassTerminalTurnGate` parameter to the OpenCode session emitter, and set it on the settlement emit. - Keep a settlement loop in session close as a fallback for a request whose turn never went terminal. - Add a fixture trigger and a regression test that reads one turn in a single pass. - Keep the late provider frame gate unchanged for every provider event path. ## Verification - Run `pnpm vitest run packages/paperclip-runner/src/drivers/opencode/opencode-server-driver.test.ts`. - Run `tsc -p tsconfig.json --noEmit` in `packages/paperclip-runner`. - Run `tsc -p tsconfig.surfaces.json --noEmit` in `packages/paperclip-runner`. - Confirm that the regression test receives `runtime_request.expired` with the original identifiers. - Confirm that the late-frame tests still report dropped provider frames. ## Risks Four call sites now reach the settlement path: session close and the three terminal turn paths (completed, cancelled, and failed). At the three terminal turn paths the turn is still the active turn, so the gate admits the settlement event with or without the parameter. Session close is the only place where the parameter changes the result of the gate, and only for a request whose turn already ended. Every provider event path keeps the existing terminal-turn gate. The known driver test failure is pre-existing and does not touch this change. ## Model Used Claude Sonnet 5, with code execution and test assistance. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run the changed tests locally; the known pre-existing failure remains documented above - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation, or no documentation change applies - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I have addressed all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
|
3c561642b4 |
fix(chat): resolve approvals and preserve unanswered questions (#14613)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Agents ask for decisions and optional details through cards in chat. > - A clear approval in a message can leave the matching card pending. > - An unanswered question can also block an unrelated later reply. > - Decisions need a saved source message, while optional questions need to remain answerable in history. > - This pull request records conversational decisions and lets users move on from questions and answer them later. ## Linked Issues or Issue Description **What happened?** Native Claude and Codex could act on approval in chat while the original approval card stayed pending. Pending question forms stayed above the composer, were absent from history, and could suppress later chat replies. A late native question answer could wait for a finished run to reconnect. **Expected behavior** The active agent records a clear approval or refusal against the exact card and user message. Ambiguous replies do not grant consent. Users can send another message without answering a question. The question remains pending in history and can be reopened and answered later. The saved answer reaches the agent. **Steps to reproduce** 1. Ask an agent to propose work with a confirmation card, then approve it in chat. 2. Check that the original card records that approval before work starts. 3. Ask an interactive question, send an unrelated message, and reload. 4. Open the unanswered question from history and submit an answer. Related work: #14408 added completion delivery. #14607 tests completion reporting turns. Neither records conversational answers on approval cards. ## What Changed - Add a confirmation endpoint backed by a user comment, with schema validation, OpenAPI discovery, and native Plan-mode access. Ask mode remains read-only. - Check company, active run, actor, current session, message provenance, revision, and resolver policy. Save the decision and audit in one transaction. Retries do not repeat effects. Emit resolution telemetry after commit. - Give fresh and resumed chat turns the actual pending confirmation identities. Teach agents to save clear conversational decisions before acting and to clarify ambiguity. - Keep unanswered Agent Chat questions as compact history entries. A newer user message closes the old form. Question cards never contribute to composer pending counts or navigation, including after dismissing a fresh form. The history card is the sole reminder; clicking it restores that exact form and draft. - Preserve Agent Chat questions when later messages or questions arrive. Historical ordinary inputs no longer gate later chat replies. Current-run requests, task execution, and governed approvals keep their gates. Remove the special acknowledgement-publication proof helpers that this rule replaces. - Route answers to finished native runs through durable fresh-wake delivery, with existing idempotency and source-question context. Settle late replies against contiguous completed conversation turns and freeze their history replay; failed, unhandled, and newly arriving messages remain actionable. - Add real-component Storybook scenarios, database and UI regressions, and a three-turn native Claude/Codex E2E case. Capture distinct, UI-ready screenshots and report the individual assertions. ## Verification - Focused decision/publication/UI regressions after merging master: 288 passed; subsequent UI draft, failed-send, and conversation checks: 199 passed. - Native question and durable delivery regressions: 106 passed, including all four terminal run states and exactly-once late delivery. Seven targeted regressions fail against the original implementation and pass with the fix. - Latest conversation/decision/native-delivery regressions after the master merge: 121 passed. Covers completed progress, missing or failed intervening turns, new messages during a late reply, stale sessions, and frozen retry/replay boundaries. Four new assertions fail before the ordering fix. - E2E support suite after the master merge: 792 passed. Negative controls reject expired cards, wrong questions/answers, stale or missing replies, unrelated clarification forms, and unexpected tasks. - The embedded-browser walkthrough caught one additional defect: dismissing a fresh question still showed a composer badge. Both Cancel and close-button regressions failed before the fix. The fix at `65f2ade12` passes 170 chat-thread tests and 792 E2E support tests. After merging master, 232 chat-thread/confirmation tests, server/UI typechecks, and token gates pass. The preview and two-provider live E2E pass at `e5512a206`; Greptile is 5/5 with zero unresolved threads at that commit. All 55 checks are now successful at `e5512a206` (four conditional checks skipped), including the aggregate verification gate and clean-install canary test. The first attempt was interrupted by simultaneous CI worker shutdowns; one failed-job rerun passed without code changes. - [Published Storybook](https://d1p6rlowie26tp.cloudfront.net/storybook/branches/codex~2Fchat-approval-resolution/?path=/story/chat-comments-agent-chat-unanswered-questions--moved-on): nine real-component scenarios. Manually exercised move on, reopen, preserve draft, answer later, answer one of multiple questions, and a custom mobile answer in the embedded browser. Retested fresh Cancel and close-button dismissal in the updated build, then reopened and submitted the preserved Green selection and inspected its answered receipt. Static preview has no live model/backend; its callbacks are fixture responses. - [First live campaign](https://d1p6rlowie26tp.cloudfront.net/runner-e2e/campaigns/gha-36714504406-1/) reproduced the late-answer completion-state defect on both providers despite correct saved answers and acknowledgements. It also exposed a valid imperative clarification rejected by the old oracle. Both issues are fixed with regression controls; this failing run is retained as evidence. - [Four-cell qualification](https://d1p6rlowie26tp.cloudfront.net/runner-e2e/campaigns/gha-36717804064-1/) passed 4/4 at `2bf8a1009`: unanswered-question return and ambiguous confirmation, each on native Claude and Codex. Inspected saved state, source-message decisions, visible cards, and agent replies. Both late-answer chats settled to waiting; no unrequested tasks were created. [Final branch rerun](https://d1p6rlowie26tp.cloudfront.net/runner-e2e/campaigns/gha-36719666238-1/) passed 2/2 at `142630720`: the same unanswered-question journey after merging master, plus an additional screenshot and browser assertion for the actual late-answer acknowledgement. - [Composer-reminder E2E](https://d1p6rlowie26tp.cloudfront.net/runner-e2e/campaigns/gha-36727006818-1/) passed 2/2 at `5b62c52d9`: native Claude and Codex, three turns each, with explicit no-badge assertions before and after reload. Inspected saved pending/answered state, both screenshots with a clear composer, and actual Blue acknowledgements; all five behavioral matchers passed per provider and neither created tasks. Cost coverage is partial; this is bounded workflow qualification. - [Fresh-dismissal E2E](https://d1p6rlowie26tp.cloudfront.net/runner-e2e/campaigns/gha-36742773318-1/) passed 2/2 at `e5512a206`: native Claude and Codex, including fresh Cancel, clear composer, reopen, unrelated message, reload, late Blue answer, and actual agent acknowledgement. All five behavioral matchers pass per provider. Inspected the fresh-dismissal screenshots and saved pending/answered identity; neither created tasks. Cost coverage is partial (4/6 runs). - Prior evidence remains available in [the earlier campaign](https://d1p6rlowie26tp.cloudfront.net/runner-e2e/campaigns/gha-36642252725-1/). Its early loading screenshot and overwritten final capture prompted the UI-ready, distinct screenshot fixes. ## Risks - The model interprets intent. The server verifies permission and provenance; it does not infer consent from text. Ambiguous and unrelated replies are not approvals. - Historical questions can accumulate. They remain visible, pending, and answerable; no automatic answer or expiry is invented. - The change to completion gates is scoped to Agent Chat and ordinary historical inputs. Current-turn and governed approvals retain their existing controls. - Live qualification is limited to the selected stories. Broader native onboarding finalization remains separate work. - No database migration. Telemetry adds no fields or values; the contract and README document the commit boundary. Privacy review was requested on the PR. ## Model Used OpenAI Codex, GPT-6 family, with reasoning, repository tools, code execution, and browser-test orchestration. The exact model ID and context-window size are not exposed to this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
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adc049b904 |
fix(runner): preserve Cursor notice identities and settlement
Keep runnerd authority item IDs separate from native notice IDs. Retry optional diagnostic persistence on later state transitions without suppressing authoritative terminal save failures. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
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653bf7c37d |
fix(runner): retain bounded Cursor diagnostics in eval evidence
Validate the Cursor notice and active session/turn before retaining its closed observation fields. Preserve unknown token usage and cost, including malformed or stale diagnostics. Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
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a36cbffa9e |
fix(connections): broaden natural-language and aggregator search (#14725)
## Thinking Path > - Paperclip manages agents and the services they need for work. > - Agents use connection search to discover a setup path before they request access. > - Tool-only filtering hid channel and AI methods from this search. > - Requiring every query word to match rejected normal task descriptions. > - A small aggregator index also omitted supported apps such as Circleback. > - This pull request broadens retrieval and returns purpose-specific setup guidance. > - Agents can choose a relevant result while existing access and provider-choice checks still apply. ## Linked Issues or Issue Description **What happened?** A search such as “AgentMail create an email address and manage an agent mailbox” returned no usable result. “Help me find tools for circle back” also missed Composio's supported Circleback toolkit. Queries longer than 200 characters failed validation. **Expected behavior** Return useful native and verified aggregator matches from natural-language queries. Include channel/email methods when Chat connectors is enabled. Identify each method's purpose and the correct setup path. **Steps to reproduce** Use the queries above with `connections_search` from an active task. Enable Chat connectors for the AgentMail case. The regression suite reproduces these misses before the change. Related routing work: #13941. This change does not change the runner failure path or add channel setup to tool-only connection cards. ## What Changed - Rank name and capability matches. Accept extra words, split names, small spelling errors, and queries up to 4,000 characters. - Include tool, channel/email, and AI methods. Return company-prefix setup links for channel and AI flows. - Add a dated snapshot of 1,583 official Composio toolkit names and a refresh script. Merge duplicate MCP variants for search and link each support claim to official evidence. - Find authorized indexed aggregator namespaces within longer queries. Return multiple app matches when the agent needs to choose. - Prefer exact app names over fuzzy matches for other apps; retain existing AI readiness. - Preserve native preference, company and identity boundaries, administrative denials, and saved provider consent. - Add relevance and database regressions, extend native tool-authority coverage, and document search behavior. ## Verification - Red: 15 new assertions failed against the previous implementation; the existing baseline passed. Added red-green regressions for Motion versus fuzzy Notion and existing AI access during review. A further regression covers mixed ready/unconfigured AI results and their per-result setup guidance. - Green: all 103 tests in the eight focused shared, database, runtime-tool, fixture, and route suites pass on the latest commit. - `pnpm -r typecheck` and `pnpm build` passed. - Latest-commit CI passed: 54 successful checks and two skipped checks, including the full test matrix, browser E2E, typecheck, build, and canary dry run. - The long local `pnpm test:run` attempt began before the review fixes and retained transformed pre-fix search code; it also hit an unrelated timing failure. Fresh serial reruns of the affected search suites and three timeout cases passed all 124 tests. Parallel local route shards hit two additional database setup timeouts; both suites passed all 17 tests on a fresh serial rerun. The complete corresponding CI suites also passed. Duplicate broad local runs were stopped after CI completed. The local UI suite independently passed all 7,007 tests. - Greptile: 5/5 on `cc6a0180d`; all review findings resolved. - Browser verification passed in a disposable local instance through real process-agent search requests: AgentMail opened its setup flow with the requester selected; the saved Circleback choice produced the Composio setup card; a paragraph-length Notion query produced its setup card. No provider credentials or external accounts were created. - The browser test caught an invalid UUID-based setup URL. The fix uses the company prefix and has a regression assertion. - A 3,971-character catalog query found Circleback first in a local 10 ms spot check after sharing query preparation across the catalog scan. This is a single measurement, not a performance guarantee. ## Risks - Broader retrieval can return extra candidates. Named services rank first; agents must select the relevant method. - The public support snapshot can age. It proves catalog support, not account authorization or the availability of every requested action. - Channel and AI methods use existing setup links. The tool connection card still accepts tool methods only. - No schema, migration, credential, or runner lifecycle changes. ## Model Used OpenAI Codex (GPT-6). The session does not expose a more specific model identifier or context-window size. Used reasoning, repository search, code execution, tests, and browser tools. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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DottaandPaperclip
|
dd7fc1f90a |
fix: raise the native journal read limit to 256 MiB (#14711)
## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Native sessions persist control-plane state so they can resume safely. > - The state includes committed provider history needed for recovery. > - The server, runnerd recovery, and durable control plane validate this state before trusting its identity. > - Their differing 64 MiB and 192 MiB limits can reject a valid journal before recovery. > - This pull request aligns all three local state limits at 256 MiB. > - Larger files remain bounded, while recovery can read larger valid histories. ## Linked Issues or Issue Description Refs #13882 Refs #14312 ## What Changed - Raise the server and runnerd recovery limits from 64 MiB to 256 MiB, and align the durable control-plane limit from 192 MiB to 256 MiB. - Add coverage for a valid history above 64 MiB and rejection above 256 MiB. ## Verification - Matching server recovery passed with more than 64 MiB of actual committed event payloads (128 events with 512 KiB deltas). - The real runnerd exact-authority resume regression with the test Codex provider passed with 193 MiB of valid JSON whitespace appended. It crosses the former 192 MiB core limit and confirms the same provider identity. This exercises the runner process and durable control plane with a simulated provider, not a live OpenAI API call. This test used approximately 1.15 GiB peak RSS. - The actual runnerd reader accepted valid 256 MiB JSON and rejected valid 256 MiB + 1 byte. The reader call took 231 ms; the fresh process peaked at 1,244 MiB RSS. - Server tests reject mismatched identity above 64 MiB and files above 256 MiB. - `pnpm -r typecheck`, `pnpm build`, and `git diff --check` passed. - Full local `pnpm test:run`: 13,730 passed, 575 skipped, 7 failed across 6 files. All failures were embedded PostgreSQL startup errors after five attempts. They affected agent hiring, instruction revisions, environment images, reviewed chat bindings, issue monitoring, and legacy continuation authority. The focused journal tests passed; the latest pushed head passed all ordinary CI checks. Superagent is the only blocking check. ## Risks - **Open review concern:** Greptile is 5/5, but Superagent is `ACTION_REQUIRED` with two P2 findings on the server and runnerd readers. Both flag the increased synchronous parsing and memory cost. This PR keeps the requested fixed-limit change small. It does not add a worker parser or a process-wide memory budget. This resource tradeoff needs review before merge. - Large state parsing is synchronous and can consume several times the file size in memory. - Remote checkpoint archive and expanded-size limits remain 64 MiB, so this change alone does not make larger remote checkpoint transfers portable. ## Model Used - OpenAI Codex, GPT-6, with delegated assistance from `gpt-6-luna` at high reasoning effort; tool use and code execution. The GPT-6 context window is not exposed in this task runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [ ] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |