14 Commits

Include renames

Author	SHA1	Message	Date
3 people	7df517d18f	perf(build): reuse a current Runner build in the server's prepare:runner-vendor step (#15926) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - Its CI runs a `Build` job on every pull request. That job runs `pnpm build` and then verifies the public npm install. Since the server test shards got faster, `Build` is the slowest check in most runs (419-497s on the six fully green `master` runs created 2026-10-11 19:46Z to 20:17Z). > - Inside `pnpm build`, the server package is the last package to build. Its first step, `prepare:runner-vendor`, runs the full build of `@paperclipai/paperclip-runner` so the server can vendor `packages/paperclip-runner/dist`. In `pnpm -r build` that package was built seconds earlier by the same command. The second build took 12-16s on those six runs and sits on the critical path of the job. > - The step cannot just be removed. A standalone `pnpm --filter @paperclipai/server build` (the Dockerfile's path) must produce a current vendored Runner on its own. > - This pull request keeps that guarantee and skips only the build that is provably redundant. The Runner's `build` records a digest of its inputs, captured before its first step and confirmed after its last, together with a manifest of every file it left under `dist`. The server's `prepare:runner-vendor` reuses the build when the digest matches, the stamp is for this platform, and every recorded output is still there at its recorded size. Any other state runs the same full Runner build as before. > - The benefit is 12-16s off the `Build` job and off every other `pnpm build` (the Canary Dry Run's `release.sh` build, local builds), with no change to what a standalone server build produces. The PR's own first run measured it: the server step reused the build in 56ms where `master` runs rebuilt for 11-15s. ## Linked Issues or Issue Description No GitHub issue exists for this. The description below follows the enhancement template. **What existing behavior does this improve?** The server build's `prepare:runner-vendor` step, which builds `@paperclipai/paperclip-runner` so the server can vendor its `dist`. **Subsystem affected** Build and CI (`server/package.json`, `packages/paperclip-runner/package.json`, the `Build` job). **Current behavior** `prepare:runner-vendor` runs the Runner's full `build` every time. Inside `pnpm -r build`, the Runner was already built by the same command 20 to 25 seconds earlier, with every check passing. On six fully green `master` runs (2026-10-11, 19:46Z to 20:17Z) the repeated build took 11.8s to 15.9s, measured from the `server build$ pnpm run prepare:runner-vendor` log line to the Runner's `Finished release profile` line. The server package builds last, so that time is on the critical path of `Build`, which is the slowest check in most pull request runs. **Proposed behavior** - The Runner's `build` starts with `node scripts/record-build-inputs.mjs --begin` and ends with `node scripts/record-build-inputs.mjs --finish`. `--begin` removes the previous stamp and records a digest of every build input before the first step reads anything. `--finish`, after every step and check has passed, recomputes the digest and writes `packages/paperclip-runner/node_modules/.cache/paperclip-runner-build-inputs.json` only if the inputs are still the ones the build began with, together with the path and size of every file under `dist`. A stamp therefore exists only for a build that completed every step on inputs that did not move while it ran. - The server's `prepare:runner-vendor` becomes `node scripts/prepare-runner-vendor.mjs`. It reuses the build if the stamp is for this platform and architecture, every recorded output is still there at its recorded size, and the recomputed digest matches. In every other case it removes the stamp and runs `pnpm --filter @paperclipai/paperclip-runner build`, the exact command the step ran before. - `PAPERCLIP_RUNNER_VENDOR_REBUILD=1` forces the rebuild. **Reason and benefit** 12-16s off the `Build` job and off every other `pnpm build` (the Canary Dry Run's `release.sh` build, local builds), with no change to what a standalone `pnpm --filter @paperclipai/server build` produces. **Breaking changes** None. The rebuild path runs the same command as before. A fresh checkout, a changed input, a missing or truncated output, an edit that landed during the build, or a stamp from another platform always rebuilds. ## What Changed - `packages/paperclip-runner/scripts/build-inputs.mjs` (new): defines the input set, the digest, the output manifest and the reuse decision. Inputs are every file under `packages/paperclip-runner` except `dist`, `dist-browser`, `runner/target`, `node_modules` and dot-directories; every file under `packages/paperclip-eval-kernel` except `dist` and `node_modules` (the Runner's `build:typescript` builds it first); every file under the root `patches` directory (`check:acpx-profiles` hashes `acpx@0.13.1.patch`, and `build-verified-provider-entrypoints.mjs` copies the `pi-acp` and `brace-expansion` patches into `dist/cli/pi-provision-inputs`); and the root `package.json`, `pnpm-lock.yaml`, `pnpm-workspace.yaml` and `tsconfig.base.json`. The toolchain pins are inside the package (`rust-toolchain.toml`, `runner/Cargo.lock`) and the TypeScript version is in the lockfile, so both are covered. A symlink is hashed as its target path and is not followed. Outputs are every file under `dist`, the tree the server copies wholesale, recorded with their sizes. Exports `beginRunnerBuild`, `recordRunnerBuild` and `assessRunnerBuild` (returns `current` plus a stable reason code: `no_stamp`, `schema_mismatch`, `platform_mismatch`, `missing_output`, `outputs_changed`, `inputs_changed`, `inputs_unchanged`). - `packages/paperclip-runner/scripts/record-build-inputs.mjs` (new): the two phases, `--begin` and `--finish`, added as the first and last step of the Runner's `build` in `packages/paperclip-runner/package.json`. Each build chain has its own pending record under `node_modules/.cache/paperclip-runner-build-inputs.pending/`, named after the shell pnpm runs the chain in (the parent of both phases; `--finish` also accepts a record named after its own pid, for a shell that execs the last command of the chain), so two Runner builds running at once in one checkout do not consume each other's record. `--finish` without a pending record for its chain is an error, so the chain cannot silently lose its first step; `--finish` after an edit that landed mid-build prints `not recorded: inputs changed while the build ran` and leaves no stamp. Records of builds that never finished are pruned by the next `--begin` after a day. - `server/scripts/prepare-runner-vendor.mjs` (new): the reuse-or-rebuild step. It resolves the pnpm that is running it through `npm_execpath` with the same rule as the CLI's `resolvePnpmInstallInvocation` (a JavaScript entry runs through this Node, a native executable runs directly, otherwise `pnpm` on PATH). It prints one `paperclip.runner-vendor.timing.v1` line with `action`, `reason`, `check_ms` and `build_ms`, so the saving is measured on this PR's own `Build` job. - `server/package.json`: `prepare:runner-vendor` now runs that script. The `build` and `typecheck` scripts are unchanged. - `server/src/__tests__/server-package-build-script.test.ts`: pins the new indirection and the command behind it (imported from the script, so the Dockerfile's standalone path stays pinned), and a new test asserts the Runner's `build` starts with `--begin`, ends with `--finish`, and has exactly those two record steps. - Tests: `packages/paperclip-runner/scripts/build-inputs.test.mjs` (node:test, added to `test:typescript:prep`) and `server/scripts/prepare-runner-vendor.test.mjs` (vitest, in the server lane). - `doc/DEVELOPING.md`: a "Reused Runner build in the server build" section under Test Commands. ## Review findings on the first head, all fixed in [2d57542](https://github.com/paperclipai/paperclip/pull/15926/commits/2d575425977f87b4612222d0a1961bc9cc5ba569) Greptile scored the first head 2/5 with three P1 findings. All three were valid. | Finding | Fix | | --- | --- | | **Patch edits leave stale output.** The root patch files the build reads were not in the digest. | Every file under the root `patches` directory is an input. Tests assert the patches are in the input list and that editing the pi-acp patch, the acpx patch, or adding a patch changes the digest. | | **Missing helpers pass the build.** Only four outputs were checked, so a `dist` that lost `dist/cli/acpx-runtime-sidecar.cjs` still counted as current. | `--finish` records the path and size of every file under `dist`; reuse requires all of them intact and reports `outputs_changed` naming the first missing or resized file. Schema bumped to `paperclip.runner-build-inputs.v2` so an older stamp is rejected. Tests cover a deleted helper, a truncated helper, and the server step rebuilding on `outputs_changed`. | | **New edits count as compiled.** The digest was hashed after the build, so a source edited while `build:binary` ran was recorded as compiled. | The build is bracketed: `--begin` captures the digest before the first step, `--finish` compares after the last and writes nothing if it moved. Tests cover the mid-build edit, the undisturbed build, and the CLI in both orders. | ## Review finding on the second head, fixed in the third commit Greptile scored the second head 4/5 with one P1, valid: two Runner builds running at once in one checkout (server `build` beside `typecheck`) shared one pending record, so the second `--begin` overwrote it, the first `--finish` consumed it, and the second `--finish` threw `no pending build inputs` after every step of its build had passed. Reproduced on the second head's module: two `beginRunnerBuild`, then the first `recordRunnerBuild` records and the second throws. | Finding | Fix | | --- | --- | | **Overlapping builds fail each other.** One pending file for every build chain. | One record per chain, named after the shell pnpm runs the chain in: `--begin` sees it as its parent, and so does `--finish`, unless the shell execs the last command of the chain (bash can), in which case `--finish` is that shell and finds the record under its own pid. Pending records of builds that never finished are pruned after a day. An edit between two overlapping starts leaves no stamp whichever build finishes last: the build that began before the edit reports `inputs_changed_during_build` and removes the stamp the other wrote, so a stamp always means every build that wrote `dist` read the inputs it names. Tests: both finishing orders with and without an edit, the pruning, a `--finish` that cannot use another chain's record, and two real `sh -c` chains (plus one under `bash`) held open at the same time, both recording. On the real repo, two `pnpm --filter @paperclipai/paperclip-runner build` chains started 8s apart with a cargo stand-in both recorded (`files=1223 outputs=1434`) and left the pending directory empty. | ## Measured on this PR's runs The `Build` job ran `pnpm build` from the branch, so both builds of the Runner in that job used the new chain. First head (c23faab, run 38175281058), against the four fully green `master` runs created 20:41Z to 21:37Z the same evening: | | PR run 38175281058 | `master`, four runs | | --- | --- | --- | | Runner build inside `pnpm -r build` | 55.3s | 47.3-62.0s | | Server step `prepare:runner-vendor` | `action:reuse,reason:inputs_unchanged,check_ms:56,build_ms:0` | full Runner rebuild, 11.0-14.8s | | Server package build | 29.7s | 32.3-43.5s | | `pnpm build` step | 114s | 102-135s | | `Build` job | 411s | 409-474s | Second head (2d57542, run 38178686999), against the two fully green `master` runs created in the same half hour (38178951607 and 38180574768): | | PR run 38178686999 | `master`, two runs | | --- | --- | --- | | Runner build inside `pnpm -r build` | 53.9s (`begin:` 22:03:04, `recorded:` 22:03:57, digest 460e02616081 over 1231 files and 1434 outputs) | 62.2s, 64.6s | | Server step `prepare:runner-vendor` | `action:reuse,reason:inputs_unchanged,check_ms:109,build_ms:0` | full Runner rebuild, 14.5s, 15.2s | | Server package build | 27.4s | 43.5s, 44.8s | | `pnpm build` step | 106s | 91s, 95s to the Runner's end plus the rest; 127s, 135s in all | | `Build` job | 405s | 461s, 479s | The rebuild is gone from the server build on both heads, and the check costs 56-109ms where `master` rebuilds for 11-15s; the rest of the spread between runs is runner speed on the `runs-on` fleet. The third commit changes nothing on the reuse path: it only changes where the pending record lives between `--begin` and `--finish`. ## Verification - `node --test packages/paperclip-runner/scripts/build-inputs.test.mjs`: 11 tests, three consecutive runs clean. Two builds at once in one checkout each keep their own pending record and both record, in either finishing order; with an edit between their starts the build that began before it leaves no stamp whichever finishes last. A build's start prunes records older than a day and no others. A `--finish` cannot use another chain's record. Two chains run by separate `sh -c` shells at the same time (and one under `bash`) both record and leave the pending directory empty. The input set is exactly the sources, the eval kernel, the root patches and the root config, and skips outputs and caches. The output manifest lists every file under `dist` with its size and nothing outside it. The digest is stable across reads, does not change when `dist`, `dist-browser`, `node_modules`, `.vite` or `runner/target` change, and does change for a Runner source, a Rust source, an eval-kernel source, the pi-acp patch, the acpx patch, a new patch, the lockfile, the base tsconfig, a new file and a rename. A symlink changes the digest but its target's files are not read. A build is current only with a matching v2 stamp, the same platform and architecture, the four named outputs present, and every recorded output intact (a deleted or truncated helper is `outputs_changed`; a file the build did not produce may appear). An input edited between `--begin` and `--finish` leaves no stamp and removes the pending record; the next build records normally. `--finish` without `--begin`, or after a build that left a required output missing, throws and leaves no stamp. The CLI brackets the build for the package it is pointed at, reports a mid-build edit, and rejects `--finish` first, both flags, neither flag, and unknown arguments. - `vitest run scripts/prepare-runner-vendor.test.mjs src/__tests__/server-package-build-script.test.ts` in `server/`: 21 tests. The decision reuses a current build, rebuilds a stale one, and rebuilds a current one only when `PAPERCLIP_RUNNER_VENDOR_REBUILD=1`. The pnpm resolver covers a JavaScript entry, a native executable, a Windows executable, no `npm_execpath`, and npm's `npm_execpath`. With an injected build command: a current stamp runs nothing and prints `action:reuse`; changed inputs run the exact command from `server/` with the stale stamp already removed; a lost `dist/cli/acpx-runtime-sidecar.cjs` rebuilds with `reason:outputs_changed`; a failing build returns its status and leaves no stamp. End to end, the CLI with a stand-in `pnpm` on PATH that brackets its build the way the real one does rebuilds on the first call, reuses on the second, rebuilds after a source change, rebuilds after a lost output, and reuses again. The guard test asserts `prepare:runner-vendor` is the new script, the rebuild command is still `pnpm --filter @paperclipai/paperclip-runner build`, the server build still starts with the step, and the Runner's `build` starts with `--begin` and ends with `--finish` with exactly two record steps; it fails against the previous build script on its first assertion. - Real repo, this checkout, with `cargo` and `pnpm` stand-ins on PATH (no Rust toolchain here; the stand-in writes the one file `stage-runner-binary.mjs` copies): `pnpm --filter @paperclipai/paperclip-runner build` ran the complete chain through the real nested pnpm (every TypeScript step and check, the stand-in cargo, the binary staging, the two binary-reading checks) and recorded `files=1223 bytes=18735059 outputs=1434`; the stamp is 128 KB. `pnpm run prepare:runner-vendor` in `server/` then printed `action:reuse,reason:inputs_unchanged,check_ms:222,build_ms:0`. Appending a newline to `patches/pi-acp@0.0.33.patch` made the assessment `inputs_changed`; truncating or deleting `dist/cli/acpx-runtime-sidecar.cjs` or `dist/cli/opencode-app-server-proxy.cjs` made it `outputs_changed` in 1-5ms; restoring each made it current again. `--begin`, an edit to `src/index.ts`, then `--finish` printed `not recorded: inputs changed while the build ran` and left no stamp. - The whole check on the real set (1223 inputs, 18 MB; 1434 outputs) takes 165-227ms on this host and took 56ms on the CI runner; the output manifest part is 1-5ms. - Not run here: the real `cargo build`, and `pnpm build` end to end. This PR's `Build` job runs `pnpm build` from the branch, so its log carries the Runner's `begin:` and `recorded:` lines and the server build's `paperclip.runner-vendor.timing.v1` line with the measured result. ## Risks - A build input outside the digest would let a stale Runner be vendored. The digest covers the whole Runner package except its outputs, the eval kernel the Runner builds first, the root patches, and the root files the Runner's tsconfig and dependency graph read. The lockfile covers dependency versions, and the pins inside the package cover the Rust toolchain. An input missed here is a bug to fix by adding it to the set; the fallback direction is always a rebuild, never a skip. - The whole `patches` directory is an input, although the Runner build reads three of its fourteen files. An edit to an unrelated patch therefore costs one extra Runner rebuild, which is the safe direction and avoids a hand-kept list of file names that could drift from the scripts that read them. - The stamp lives in `node_modules/.cache`, which pnpm does not manage and `.gitignore` and `.dockerignore` already exclude. It is about 128 KB with the output manifest. The Docker build has no stamp and no prior Runner build, so it rebuilds exactly as before. - A stamp is written only after the Runner's `build` passed every step on inputs that did not change while it ran. The Runner's first step and the prepare step both remove any existing stamp before a rebuild starts, so a build that stops partway, or a build command that fails before its first step, leaves no stamp. - `node scripts/record-build-inputs.mjs --finish` on its own is an error; the script is only meant to run as the two ends of the `build` chain, and the guard test pins that. - The pending record is keyed by the pid of the shell that runs the chain. pnpm runs every script through a shell (`sh -c` on POSIX, `cmd` on Windows), and both phases are children of that shell; a shell that execs the last command of the chain is covered by matching the finishing process's own pid too. A chain run some other way, with the two phases under different parents, fails loudly at `--finish` rather than recording. Two builds running at once still write the same `dist`, which no stamp can make safe; what the record guarantees is that a stamp is written only by a build whose own inputs did not move. - The platform and architecture are part of the comparison, so a stamp from another machine is never trusted; an older v1 stamp is rejected by schema. - The Typecheck job builds the Runner once, through this step, with no prior `pnpm -r build`, so it gains nothing and loses nothing: there is no stamp and it rebuilds as before. - The step now spawns pnpm through `npm_execpath` instead of relying on `pnpm` being on PATH, because under corepack the script shell has no `pnpm`. Outside a pnpm script it still falls back to `pnpm` on PATH. ## Model Used - Claude (Anthropic), model id `claude-fable-5-1` (Claude Fable 5.1), extended thinking, with tool use (shell, file editing, GitHub CLI) in a Paperclip agent session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: devinfoley <139239+devinfoley@users.noreply.github.com> Co-authored-by: Claude Fable 5.1 <noreply@anthropic.com>	2026-10-12 11:25:24 -07:00
DottaandPaperclip	db2f00947b	fix(runner): include Claude ACP in the server package (#15912) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The server ships a copy of Paperclip Runner for native agent execution. > - The Claude ACP bridge is a runner dependency, but it was absent from the server package. > - The runner resolves this bridge dynamically, so the import-based packaging check missed it. > - A Claude session then failed before startup and showed a generic connection error. > - This pull request ships the qualified bridge and reports a missing runtime with repair steps. ## Linked Issues or Issue Description **What happened?** A server install with the vendored runner could not load `@agentclientprotocol/claude-agent-acp/package.json`. The runtime test suggested checking the model or provider connection. The task reported an interrupted runner session. **Expected behavior** The server package includes its qualified Claude ACP runtime. A missing bundled runtime reports an installation error and explains how to repair it. **Steps to reproduce** 1. Use a server install with the vendored runner and no Claude ACP bridge. 2. Select the Paperclip Runner ACP harness and the Claude provider. 3. Run the runtime test or open a session. 4. Observe a missing-module failure before Claude starts. **Paperclip version or commit** Reproduced on `e733bddc45`. This branch is based on current master. **Deployment mode** Self-hosted server built from source. Related: #15224 upgrades the Claude bridge. This PR fixes its omission from the server package and keeps the current qualified version. A future bridge upgrade must update the server pin too. ## What Changed - Add Claude ACP `0.73.0` to the server dependencies and bundled dependencies. - Pin the qualified Claude SDK and bridge dependencies in the npm bundle producer graph. Publish its native packages as consumer optional dependencies instead of shipping the producer executable. - Bind source-built vendored runners to the shared pnpm dependency store while retaining the server manifest as the provider authority. Keep published npm and self-rooted deployment roots unchanged. - Include dynamically resolved Claude and Codex bridges in the vendor dependency check. - Preserve the missing-package category through the sidecar, Rust transport, and native session executor. Stop automatic retries for this installation failure. - Show **Runtime missing** in the runtime test and task thread. Explain the reinstall or rebuild, server restart, and runtime test steps. - Add regression tests and document the repair procedure. ## Verification - Red/green comparison with the production sidecar: the same missing-package setup returns a raw require-stack error on the original code and an actionable, non-retryable missing-runtime error on this branch. - The rebuilt server's vendored Claude installation probe passes using the source-server authority selected by the launcher, without starting a provider or making a model request. - Focused server verification: 830 tests passed. Runner installation and sidecar error tests: 83 passed, with 6 platform-specific skips. Packaging tests: 28 passed. Rust transport tests: 7 passed. - Source/deployment authority tests: 3 passed. Red/green packaging tests include a Linux-produced Claude SDK bundle, actual npm pack, and closed executable admission on Linux x64 and macOS ARM64/x64. - Full UI suite: 8,113 tests passed. - `pnpm -r typecheck` and `pnpm build` passed on the rebased branch. - Full current-head CI passed, including all general and serialized test lanes, Runner Rust/Vitest verification, typecheck, build, and all eight e2e shards. Greptile reviewed `d6a2741834ff922956560f2f689382827bbaf9e0` at 5/5 with no unresolved threads. - Local full-suite limitation: an earlier parallel attempt hit Postgres startup failures and timeouts; the affected server tests and a database fixture passed in isolation. The subsequent serial `pnpm test:run` was stopped while still running after complete CI passed. Focused local tests, full UI tests, typecheck, and build completed as listed above. - Token gates and `git diff --check` passed. ## Risks - Bundling the Claude bridge increases the server package size. The producer graph retains the qualified SDK version and existing isolation patch. Native platform declarations move to the published server manifest, while the runtime keeps its exact version, declared-slot, no-follow, and executable digest checks. - The new failure category is permanent. Operators must repair the server installation before they retry the task. - Existing failed runs retain their recorded error. The clearer message applies to new runtime tests and runs. - No database schema or migration changes. ## Model Used OpenAI GPT-6 through Codex. The system reports the model family; the exact deployment ID and context-window size are not exposed in this session. Used reasoning, browser inspection, tool use, and code execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-12 06:51:22 -05:00
Nicky LeachandPaperclip	2dd9811e8b	Own agent hiring and termination in a lifecycle module (#15631) ... ## Thinking Path > - Paperclip manages AI agents and their work. > - Agent creation, approval, pause, and termination change whether an agent can work. > - These changes currently use separate service and database paths. > - Some agents need setup after their record exists and before their harness can run. > - This PR adds one module that owns those state changes and their transactions. > - The module records progress and retries incomplete work after a server restart. ## Linked Issues or Issue Description **Problem or motivation** A hire can become active before its execution environment is ready. Direct agent state writes also bypass one common lifecycle boundary. Termination does not have a durable step for resource cleanup. **Proposed solution** Use agent lifecycle commands for hiring, approval, pause, resume, and termination. Keep proposed hires pending until approval. Prepare each approved hire, test its saved harness configuration, and then permit work. Wait for required plugin work before completing a step. **Alternatives considered** A general database commit hook would expose transaction details to callers. A timer alone would delay each new hire. This module owns each command transaction and starts its worker after commit. A periodic scan recovers work after a process stops. **Roadmap alignment** This change adds the lifecycle boundary for the existing agent and plugin systems. It does not add a user interface or a provider implementation. It replaces the lifecycle delivery approach in #15391. Related proposals include #11475 and #13099; this change does not add their external executor protocols. ## What Changed - Add durable approval, preparation, verification, pause, resume, stop, and cleanup states. - Keep agent creation, lifecycle state, configuration writes, and agent record deletion behind `modules/agent-lifecycle`. Keep validation, credential rules, reads, onboarding, invitations, general approvals, and company data deletion in their services. - Commit a hire before the remaining onboarding or invitation work. Serialize requests with the existing dedicated database connection helper. Reuse the hire after a failed attempt. - Keep accepted work in the run queue during setup. Require execution and cleanup evidence before completing pause or termination. - Retain the original credential owner when approving migrated hires. - Start lifecycle work after each command commits. Use database leases and revision checks for retries and late results. - Add a generic required plugin method and capability. Store the required plugin IDs for each agent. Track host and plugin completion separately. - Keep harness verification and credential rules in services. Supply their results to lifecycle through explicit ports. Reject failed logins and incomplete probes. - Remove reverse imports from lifecycle adapters into services. Share record queries and validation below both layers. - Use one hire decision path for agent IDs and approval IDs. Resolve the approval and agent change in one transaction. Expose policy reconciliation on the command object. - Save configuration and verification invalidation through one module operation. Ordinary commands own their transaction. Restrict the shared transaction integration to its listed callers. Reject identity, company, accounting, timestamp, and unknown fields. - Require completed termination before deleting agent records. The company deletion service calls the module through a separate deletion interface. - Save an approved secret before applying its agent binding. A failed binding leaves the secret approved. A retry reuses it. - Remove old permission and metadata export files. Move hire configuration rules out of lifecycle persistence. - Report failed worker steps and scans with operation context and known error codes. Omit provider messages, stacks, and configuration values. Document ordinary application use and extension rules. - Recover expired native owners only after execution stops. Retry cleanup of failed retained leases. Wait for setup in the live smoke script. - Keep manual, budget, and company pause reasons separate. Guard execution status writes with the ready state. - Add a migration, boundary checks, regression tests, and a lifecycle guide. Keep the current UI. - Limit periodic policy checks to 100 eligible agents per minute. Continue from the last agent ID. Exclude pending hires and agents in termination or a final state. Keep explicit company and budget updates immediate. ## Verification - Latest head `ccc3c86b0` aligns the shared status update schema with the PATCH route. All 15 shared tests, 104 server route/OpenAPI tests, 2 CLI tests, and shared/server/CLI TypeScript checks pass. The Greptile comment is fixed. CI is running; no new Apex review was requested for this small fix. - Rebase `75708ac94` rebases onto master at `2eb5187e4`. The backup test uses the shared 90-second timeout from master; the older timeout commit was removed. The affected backup test passes. - Agent budget edits now pass the target agent ID through enforcement. All 50 affected tests, server TypeScript, and 11 boundary tests pass. Both configuration update paths have regression coverage. CI is running on the latest head. No new Apex review was requested for these small fixes. - Rebase `9b568666a` preserves the run-control extraction and delivery-work startup changes from master. All 559 affected tests, server TypeScript, and 11 boundary tests pass. CI and Apex review are running on the final head. - The policy scan fix passes 56 lifecycle and diagnostic tests, 24 policy and caller tests, and 11 boundary tests. A regression test checks the page limit, interval, excluded states, and cursor wraparound. - Rebase `fd4698750` passes all 611 tests in eight affected lifecycle, route, and heartbeat suites. Server TypeScript and all 11 module boundary tests pass. The company deletion rollback and concurrent hire tests are included. - Follow-up `00aac7646` fixes the failed decision deletion test and the public update schema. All 126 affected server tests, 8 shared tests, 2 CLI tests, and 11 boundary tests pass. Shared, server, CLI, and UI TypeScript checks pass. - Server TypeScript passes: `pnpm --filter @paperclipai/server exec tsc --noEmit`. - All 11 boundary tests pass: `node --test scripts/check-module-boundaries.test.mjs`. The repository boundary scan also passes. - All 68 lifecycle, failure diagnostic, and harness verification tests pass. Tests reject forbidden fields through the root command, combined transition command, and restricted transaction integration. They also check invalid fields returned by configuration preparation. - Failure tests cover host work, plugin work, claims, renewals, deferrals, and scans. Log tests check known error codes and exclusion of private error contents. - All 355 tests in 10 existing caller suites pass. These tests cover secret approval, pairing, pending hires, credentials, company import, built-in agents, managed agents, instructions, and skills. - The branch is rebased onto `origin/master` at `2eb5187e4`. The queue guards and cancellation lock fix use the extracted heartbeat queue. Agent cancellation uses the extracted run-control file. The source diff scan found no secrets or private URLs. - Earlier checks cover approval retries, rollback, late verification results, policy holds, deletion rollback, concurrent company deletion, and queue admission during setup. - Before the rebase, CI passed on `00aac7646` and Greptile Apex rated it 5/5 with no open comments. CI and a new Apex review are pending for the rebased commit. The branch has no merge conflicts. - The full local build and native Dot suite were not run. The host has no Cargo. No live provider test was run. ## Risks - Background policy recovery takes more than one minute when more than 100 agents are eligible. Explicit company and budget updates still reconcile immediately. - The restricted configuration integration keeps an agent reference and its dependent records in one transaction. It cannot change a budget or invoke a lifecycle transition. A periodic scan starts pending setup after that transaction commits. - Secret approval and binding use separate transactions. A failed binding can leave an approved secret with no agent binding. - New approved hires remain unavailable until setup and verification complete. Existing clients see `paused` during these steps. This PR does not change the UI. - Migration `0320_daily_onslaught.sql` maps existing statuses and pause reasons. It does not create external resources or claim that an existing harness passed verification. - Use a coordinated server update for this migration. Older server versions can write legacy status without the new lifecycle checks. - A failed onboarding or invitation request can leave a committed hire. A retry reuses that hire and completes the remaining records. - Deletion requires completed termination. Company deletion can require another request while cleanup is pending. - Required plugins must make repeated calls safe and reject older revisions. A disabled or removed required plugin blocks completion until it is restored. - A new hire can run a second harness test after the existing UI test. Some adapters can charge for this test. - No live provider test was run. Provider implementation and resource backfill remain separate work. ## Model Used OpenAI GPT-6 through Codex, with reasoning, code tools, and local test execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have described the issue in this PR with the feature request field labels - [x] I have not referenced internal or instance-local issues or links - [x] My branch name describes the change - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation - [x] I have considered and documented risks - [x] Targeted local tests pass - [x] All Paperclip CI gates are green on the new commit - [x] Greptile Apex is 5/5 with no open comments on the new commit - [x] I will address review comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-09 09:05:12 -07:00
DottaandPaperclip	fc6304dfe5	feat(runner): add experimental OpenAI Dot provider over MCP Events (#15402) ... ## Thinking Path > - Paperclip manages AI agents, tasks, permissions, and execution budgets. > - Paperclip Runner gives each provider the same admitted task and tool authority. > - OpenAI Dot runs outside the local process tree and needs asynchronous work delivery. > - The merged MCP gateway supplies OAuth consent and signed event delivery. > - A personal assistant grant cannot safely stand in for an assigned agent. > - This pull request adds a separate Dot agent connection and a durable Rust Runner bridge. > - The operator can assign work to Dot and inspect its accepted work, tool receipts, and result. ## Linked Issues or Issue Description **Agent or provider** OpenAI Dot, as an experimental provider of the existing Paperclip Runner adapter. **Why this adapter is useful** An operator can assign normal Paperclip tasks to an existing Dot. Dot can read its mailbox, request work on an assigned task, use admitted task tools, and submit a result. Paperclip keeps company scope, checkout, approvals, known budget limits, and activity attribution. **How the agent is invoked** A dedicated `/mcp/runner` OAuth resource pairs one Dot grant with one agent. A signed MCP mailbox event wakes Dot. Dot explicitly accepts the assignment. The Rust Runner owns the durable turn and operation receipts. The first release supports self-hosted instances with a local Runner controller. **Additional context** This extends the merged public MCP gateway from #14846 and the assistant invitation and device-consent work from #14933. This also integrates the merged assistant tool and configuration expansion in #15380. Dot retains its dedicated agent resource and cannot receive personal configuration permission. The public assistant connection remains a personal connection. ## What Changed - Add a durable Rust Dot provider and its TypeScript Runner driver. - Add closed PRP v3 external-provider operations and native execution input v6. - Add company-scoped pairing, mailbox, assignment, and operation records. - Reuse merged browser/device consent, client metadata verification, webhook admissions, refresh, secret rotation, and warm-standby gates. - Keep Dot scopes, issuer, grants, event workers, and tool access separate from personal assistant access. - Add Dot configuration, pairing, readiness, and consent UI. Keep agent grants out of the personal Connections entry. - Regenerate the Dot-only migration after master. Preserve published gateway migrations. Make the new migration safe to reapply. - Document setup, recovery, accounting limits, evidence, and remaining account qualification. - Reverify reconnect callbacks and wake outstanding work with a fresh mailbox reference; preserve the existing assignment and operation receipts. - Clean up Dot bindings and waiting runs on OAuth revoke and refresh-token replay. Old grants cannot revoke replacement bindings. - Restore the pairing reference when an unsaved agent form is reopened; document board-only pairing routes in OpenAPI. - Accept a clean Rust exit after the acknowledged shutdown receipt. Unexpected exits still require recovery. - Clear the cached binding after a successful revoke so a failed connection refresh cannot restore it. - Add production-component Storybook states and screenshots for pairing and connection review. All preview account data is synthetic. - Persist normalized completion, serialize Dot turns and durable work admission, and poll subscription readiness. - Serialize mailbox writes and cursor reads; retain paused fence acknowledgement without task authority. - Authorize admitted review runs without changing the worker assignee. Include the fenced assignment ID in production stop notices. ## Verification - This PR integrates master `4a8178e9c`. Dot migration `0317_messy_famine.sql` follows the published history and is safe to reapply. The merge preserves the reserved migration connection, batch-commit handling, private task checks, task monitors, and native accounting. - Local workspace typecheck, full build, and UI token gates pass. The server typecheck passes after the review fixes. Database and native executor regressions pass. - All twelve real Rust/PostgreSQL Dot integration tests and twelve Dot driver tests pass. The tests cover native document writing and finalization, durable replay, queue admission, mailbox ordering, admitted reviews, stale authority, production stop references, and paused acknowledgements. - Current head `d0e7e0626` passes all 57 checks: 53 pass and four are intentionally skipped. This includes full typecheck, build, tests, Rust Runner verification, browser E2E, release verification, and Canary Dry Run. Greptile rates this exact head 5/5. All review threads are resolved. - The full local root test run is slower than the sharded CI run and has not completed. The full CI test gates pass on the current commit. Focused local regressions pass. - Real-account pairing and event delivery on this base commit remain unqualified. Live account and setup proof are recorded in the follow-up #15414. The following screenshots use synthetic preview data. They show the production pairing component and do not qualify a real account or the full agent setup journey.   ## Risks - This base adapter uses `PAPERCLIP_ENABLE_OPENAI_DOT=1` plus Public MCP and Paperclip Runner. The separate experimental-settings follow-up in #15414 replaces this environment flag with saved operator settings. - Dot does not expose provider token usage or cost. The operator must acknowledge external billing. Known Paperclip budget gates still apply. - Cancellation fences Paperclip authority. It does not confirm that Dot stopped all external activity. - Assigned skill files and third-party MCP bindings are unsupported and reject admission. There is no mounted workspace, model selector, or provider thread identifier. - Hosted agent-broker and remote controller deployments are not qualified. - The new migration follows the merged master history. Existing prototype databases still need the normal master migration history before this Dot-only migration. ## Model Used OpenAI Codex, based on GPT-6. The exact deployment ID and context window size are not exposed in this session. Capabilities used: reasoning, repository editing, code execution, and test inspection. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #123` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub references) - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-07 19:11:50 -05:00
DottaandPaperclip	8cfedd7df8	fix(runner): restore task monitors and durable timed waits (#15446) ... ## Thinking Path > - Paperclip manages AI agents and their task execution. > - Agents need a durable way to return to work after a delayed check. > - The issue monitor scheduler already provides a one-shot wake for an assignee. > - Native runners reject generic execution-policy writes and had no bound monitor tool. > - Scheduling alone is insufficient because native completion also needs to accept a timed wait. > - This pull request adds an authorized monitor tool and connects it to completion and the existing scheduler. > - An agent can now schedule its next check, end the run, and resume on the same task. ## Linked Issues or Issue Description **What happened?** A native runner could not set its own task monitor. `call_api` correctly rejected execution-policy writes, while `schedule_wake` had no production binding. `paperclip_finish` also rejected monitor waits. **Expected behavior** A standard native run can set a one-shot monitor on its current task or another accessible task assigned to the same agent. After a confirmed schedule on the current task, it can yield. The scheduler later delivers `issue_monitor_due`. **Steps to reproduce** 1. Start a standard native task. 2. Ask the agent to check the task again later and end its current run. 3. Inspect available tools and try the generic issue execution-policy update. 4. Observe the missing native tool and the lifecycle-write denial. Related PRs: #14680 concerns monitor notes in the shared wake prompt. #11919 changes attempt-limit scope. This PR adds native scheduling and completion authority and retains the existing cumulative attempt bounds. It does not depend on either PR. ## What Changed - Add provider-neutral `set_task_monitor` with a default current-task target, future timestamp, required notes, existing bounds, and explicit clearing. - Check company, task visibility, ownership, runtime permissions, work mode, and active-run authority. Preserve review-only restrictions. Reject the reserved server-owned quota-recovery name before saving or accepting a native wait. - Commit the monitor, audit event, and retry receipt together. Retry receipts survive a successor run without re-arming cleared or consumed timers. - Permit `paperclip_finish` to yield to a persisted monitor. Recheck ownership and the schedule when committing final disposition. Release execution without an immediate continuation. - Preserve due monitors during native execution. Fence wake admission and consumption against replacement, clearing, reassignment, and completion. Preserve unrelated review policy. - Expose scheduled and consumed monitor instructions in task context. Update provider schemas, Rust validation, generated contracts, and execution documentation. - Add an opt-in live Codex smoke script with isolated data and explicit run/session/runner/process evidence. ## Verification - Repository `pnpm -r typecheck` and `pnpm build` passed after rebase. Server typecheck passed again after review fixes. All CI test shards pass on `3def77b1b`, including runner TypeScript/Rust, server, serialized server, workspace, and browser tests. All CI gates are green, including the canary dry run. Greptile is 5/5 on the same commit with zero unresolved threads. - The local monolithic `pnpm test:run`, started before the rebase, was interrupted after current-head CI test coverage passed. It is not counted as a standalone full-suite pass; the focused local regression suites passed. - Targeted server tests cover scheduling, replacement, clearing, policy preservation, cumulative bounds, cross-run retries, permissions, provider-neutral discovery, review restrictions, completion authority, and scheduler/finalizer races. - Runner contract/catalog/semantic tests and Rust terminal-tool tests cover the new operation and monitor completion. - Live Codex test passed twice (latest live run on `e0bcd63e6`) in a temporary database and workspace, with a 300,000 ms warm window. First run `67bd7709-c089-4d4a-9d2b-0d6b618a34b0` yielded at `2026-10-07T13:15:03.274Z`. Second run `97c323f9-595a-4cc5-a007-db5a2fbb937c` started at `13:15:30.952Z`, received `issue_monitor_due`, and completed the same task. Exactly one monitor wake was recorded. - Both live runs used native session `7b1dd753-1c9b-4e7a-b22f-a125dbc3748c`, runner `e90d9a1b-3502-4ee3-b15e-edc024c555d4`, provider session `01a11680-6d01-70c0-9a55-db7246ed66c3`, and PID `64218` with the same process start time. This proves warm reuse for that local Codex test, not only successful scheduling. - Reproduce the paid live test with `node --import ./server/node_modules/tsx/dist/loader.mjs server/scripts/smoke-native-task-monitor.ts --run`, with the installed Codex binary on `PATH` and a valid local login. ## Risks - The scheduler now defers monitor dispatch while the task has an active native run. A stuck run still depends on the existing recovery lifecycle. - Idempotency uses the existing run ledger; no table or migration is added. - Other providers share the tested tool and completion contracts. Only Codex received a live model test. - Existing `call_api` lifecycle restrictions remain enforced. Monitor waits do not bypass task blockers, reviews, or approvals. ## Model Used OpenAI Codex, GPT-6 family, with tool use, code execution, and TypeScript/Rust editing. The session does not expose the exact deployed model ID or context-window size. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-07 08:41:24 -05:00
DottaandPaperclip	a6306ba606	feat(runner): consolidate Cursor production integration (#15075) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The native Runner keeps provider sessions under company authority, approvals, budgets and durable recovery. > - Cursor work was spread across candidate branches. The published branch lacked later plan, permission and cleanup fixes. > - Production also needs public installation and matching runtime assets for local and Daytona execution. > - This pull request consolidates Cursor onto current mainline recovery behavior and completes that installation path. > - The installed v11 release passed focused local and Daytona qualification after the generic mode and lifecycle cleanup. The later model-selection correction and current mainline merge produce v14 artifacts that need matching release qualification. > - Cursor admission is enabled in source; publish only an artifact combination with matching qualification. Native AskQuestion and complete per-run dollar accounting remain excluded. ## Linked Issues or Issue Description Refs: #14435, #14631, #14669, #14699, #14724. This completes the Cursor implementation by @cryppadotta from combined source `22c78242a4e0c2369fecf0c2dc4e7600fbad6706`. It preserves newer mainline recovery, completion and warm-directory behavior. Pi and Copilot remain gated. ## What Changed - Generate named Rust and TypeScript ACPX release profiles from one manifest. Share runtime pins with packaging and server verification. Preserve vendor runtime versions; bind the updated ACPX patch to Cursor profile v14 and reject stale generated declarations at build/typecheck. - Remove ACPX model allowlists, including the former Codex and Pi restrictions and the duplicate developer test-drive gate. Send any explicit model ID unchanged to its provider and verify the effective selection before prompting. The bundled ACPX package forwards unlisted IDs, rejects mismatched acknowledgements, and restores the exact selection after session load. It does not expand Cursor model aliases. Provider rejection, mismatch, or missing model controls fails without a fallback. Model examples live in evaluation fixtures, outside runtime declarations. - Add pinned Cursor execution, contained instructions, exact model verification and Agent/Plan/Ask modes. - Carry an opaque generic `mode` identifier in shared native execution, sidecar, Rust and recovery contracts. The provider adapter owns supported modes, defaults, native translation and acknowledgement. - Keep native RPC recognition, accepted-plan interpretation and permission evidence behind provider adapters. Shared settlement and recovery verify normalized facts and their committed evidence. - Replace the Cursor-only warm-attachment branch with a runner-owned capability. Only Cursor opts into it. Move profile compatibility and optional usage parsing into provider metadata and adapters. - Write generic plan-wait receipts. Read exact historical Cursor receipts through a separate compatibility decoder. Reject mixed formats and preserve existing authority checks. - Carry native plans, semantic questions, todos, child activity, permission identities and partial usage diagnostics through the Runner. - Preserve durable response delivery, cancellation, warm ownership and process retirement. - Finish accepted planning runs successfully. Keep their tasks open for explicit direction. Acceptance does not start implementation. - Ship `paperclipai runtime setup cursor` and its provisioner through the public package. npm installation does not download Cursor. Setup uses the OS account's closure-keyed cache so system-wide npm packages can remain read-only. Run it as the Paperclip service account. - Include Cursor in normal provider packs and Daytona images for macOS ARM64/x64 and Linux x64. - Reject stale release packs by source revision and current ACPX/Cursor pins before assembly writes files. Verify current Cursor version/profile/closure again at runtime. - Ship all three daemon targets and the expected Linux image-pack identity. A macOS controller uses its packaged Linux daemon for Daytona. Image mismatches fail before provider launch. - Use the vendored Runner boundary for installed readiness probes. Verify the actual installed Cursor probe. - Verify compiled public Daytona plugins and their release versions in installed smokes. - Record exact artifacts, the acceptance matrix, retained failures, supported capabilities and rollback behavior in the [readiness report](https://github.com/paperclipai/paperclip/blob/codex/cursor-production-readiness/doc/plans/2026-10-03-cursor-production-readiness.md). ## Verification - Current head `f7ec5cc1f0e30c62a829c016ff2013a2a9d79037` merges mainline `faa8e452c73bae5e044dd6379179a00106abb131`. It keeps Cursor plan and cancellation guards alongside mainline historical-question filtering. The evaluation catalog includes both Cursor and expanded adapter accounting cases (683 total). Recursive typecheck, full build, 696 lifecycle/recovery tests, 45 fixture tests and fixture typecheck passed. Current-head CI passed: 56 successful checks, one neutral and four skipped. [Complete CI](https://github.com/paperclipai/paperclip/actions/runs/37557996535). The fresh Base Greptile review is 5/5 on this exact head, with 304 files reviewed, zero new comments and zero unresolved threads. The user authorized overriding the CODEOWNER review gate after checks passed; no failing checks are overridden. Prior results below retain their own head identities. - Corrective head `3d2b168366258036f6b6a6fccb382c49138cc601` fixes the post-merge Apex finding. Automatic-review and new-evidence reconciliation preserve pending child results and recheck delivery under the status lock before completing. Account repair now excludes unrelated secret consumers and requires the failed agent's identity. Regression coverage includes the commit race, delivery statuses, current-run/current-intent exclusions, repeated reconciliation, both database reconciliation paths, and credential consumer boundaries. All 184 affected tests, server typecheck and server build passed. Current-head Base Greptile review is 5/5, with 304 files reviewed, zero new comments and zero unresolved threads. Current-head CI passed: 56 successful checks, one neutral and four skipped. [Complete CI](https://github.com/paperclipai/paperclip/actions/runs/37535994724). This Base review is distinct from the earlier Apex review. - Merge head `5957c257a` reconciles mainline `b508a05c4`. It preserves both accepted-plan waits and pending-child-completion checks, current provider selectors, task-creation response identities, and mainline ACPX missing-file handling. The combined patch is bound to Cursor profile v14; historical records keep their original identities. - Merge head `5957c257a` passed recursive typecheck, full build, 43 installed ACPX/package contracts, 107 provider UI and plan/recovery tests, 593 database-backed lifecycle tests, 49 profile/native contract tests, 45 Product E2E fixture tests, fixture typecheck, token gates, three provider-free browser task-creation cases, and Runner conformance/replay checks. Its complete CI passed (55 successful checks, one neutral and four skipped), while Apex returned 2/5 with a child-delivery finding addressed below. - The local full-suite attempt again failed the unchanged Git streaming test (360-second timeout) and was stopped. The concurrent local Rust attempt failed four unchanged Codex process/deadline tests; all four passed serially without code changes in 7.29 seconds after removing the competing test load. These failed commands are retained and are not reported as full-suite passes; the fresh Linux CI runs are tracked separately. - The previous head `907bdb2a2778c7ffeb4a662a91460c9d1ddfc9c5` earned Apex 5/5 with zero comments after fixing all three findings: per-user install cache, stale release-pack rejection, and public Linux smoke account/home handling. Its real built installer passed from read-only public packages on macOS ARM64 and Linux x64. All 137 release-registry checks and 64 ACPX package contracts passed. That review does not cover this mainline reconciliation. - Prior `beadd3654` passed the full CI matrix; its one unchanged chat test failure and successful single retry remain in the [CI history](https://github.com/paperclipai/paperclip/actions/runs/37521449327). Historical results below remain attributed to their original builds. - Fixture follow-up `dd59d7e82b103a88b7cbd7d2c38b612c0fbbff7a` removes provider-specific model choices from generic offline ACPX tests. The fake sidecar preserves the model and session identity selected at open through suspension. Affected verification passed: 106 Rust tests and 73 TypeScript tests. This commit changes test code only; the production-code checks below retain their recorded identities. Its CI and Greptile review later passed; those results belong to that historical head. - Model-selection cleanup `9a070808b48960a41fdfd369ae0636b95af82459`: 252 focused Runner tests passed (six platform skips), covering all six ACPX agents, native model acknowledgement, rejected selections, installation integrity and recovery identity. The merged branch passed recursive typecheck, full build, token gates, server admission (19 tests), and the Product E2E catalog (45 tests). The acceptance catalog passed all four tests. The full Rust suite passed: 643 tests, 2 ignored. It verifies sidecar acknowledgement of unlisted models and rejection of model mismatches. The final commits only update Rust tests; production sources match the verified build at `65ec3279ac50185e3cda109b5cfd9b4f56105de0`. No new paid provider calls were made. - The merge preserves both Cursor and the new mainline public-MCP fixture cases. Auto-merge remains disabled; the latest follow-up status is recorded above. The local `pnpm test:run` attempt hit the unchanged Git streaming test's 300-second timeout and was interrupted before merging mainline. The broad Runner attempt found obsolete single-model assertions plus three macOS fixture-path failures caused by a `/private/tmp` override. The assertions are corrected; affected TypeScript checks passed with the standard macOS temporary directory, and the complete Rust suite passed. Neither interrupted command is a full-suite pass. - Earlier declaration-cleanup head `6f4a5e9e2` passed recursive typecheck, build, Rust and focused tests. Its CI later exposed a test expecting duplicated Grok digest literals. The current source fixes that assertion to compare launcher bytes with the shared manifest. Historical successes and failed attempts are retained; no new live provider qualification is claimed. - Previous head `e75fde6098b0ddd8cec765bfb6ecaeecb88a26a6` passed complete CI (56 successful checks, one neutral, four skipped) and Greptile 5/5. [Historical complete CI](https://github.com/paperclipai/paperclip/actions/runs/37489112305). Those results are not claimed for the cleanup head. - Frozen live application: `d7b696f9b8f79095233e9e3d56d23e6a6018dd48`. Public package version: `0.0.0-cursor-verify.3d0c9b7761c6`. The declaration cleanup preserves release pins and does not relabel that tested artifact as a build of the new source. Mainline through `e34abee670` was reconciled while preserving accepted-plan waits, provider-capacity handling, and both Cursor and public-MCP fixtures. - Clean normal installation, explicit Cursor setup and daemon resolution passed on macOS ARM64, macOS x64 under Rosetta, and Linux x64. npm lifecycle hooks ran without silently downloading Cursor. - Historical v11 live matrix: **18/18 passed with cleanup** (nine local, nine Daytona) after the generic mode and lifecycle cleanup. The campaign has 23 attempts; all five failures and their diagnoses remain recorded. Exact case identities, hashes and limits are in the readiness report. All provider calls are real, use the explicit Luna model and company-bound credentials, and run without qualification or runtime-asset overrides. - The immutable Daytona image is `ghcr.io/paperclipai/paperclip-daytona-runner@sha256:d6259b6bba094702c13fc2283bd85550849c1c53145b656fb2746778f9fa1747`. The public Daytona plugin is installed independently and its version is checked. - Recursive typecheck, full build, token gates and Runner contract/conformance/replay checks passed on the frozen application. Its complete Linux CI suite passed. The duplicate local full-suite command was incomplete after timing failures; affected repeats passed, but that command is not reported as a clean pass. - Qualification fixtures passed typecheck, 1,675 Vitest tests (one skip), 128 Node checks, three provider-free browser tests, and 150 focused lifecycle tests after the final diagnostic correction. The affected legacy Cursor command file also passed all five tests after removing its shorter 10-second override; it now inherits the suite’s standard 15-second timeout. Greptile is 5/5 on `e75fde609` with no unresolved review threads. CI results above are recorded separately from historical build results. ## Risks - Cursor v14 includes the updated ACPX dependency patch and release identity. The v11 live matrix and image below remain historical evidence. They do not certify new v14 package/image artifacts. - ACPX accepts models beyond the qualification fixtures. Availability and entitlement depend on the provider. Successful configuration is not a claim of live qualification for every model. - Shared mode is an opaque identifier. Provider adapters own its meaning. Incompatible historical sessions remain fenced; exact committed plan waits and task history remain inspectable. - Native AskQuestion is excluded. Paperclip semantic questions are supported. Authoritative per-run dollar accounting is unavailable; partial counters remain diagnostics and unknown cost is not zero. - Image input, detailed native diffs, deeper child transcripts and native plan-file export remain follow-ups. - macOS x64 has clean-install and daemon-startup proof under Rosetta, not a separate live campaign on Intel hardware. - Release only the tested package/image combination. Merging this PR does not publish npm packages or deploy that image. Later builds need their own release verification. Rollback disables new Cursor admission while preserving records and recovery inspection. - A model can fail an exact instruction: one cancelled-plan attempt returned the wrong summary marker despite correct cancellation. The unchanged repeat passed; both results remain in the report. > ROADMAP.md was checked. This completes existing native Runner/Cursor work; it does not add an independent core feature proposal. ## Model Used OpenAI Codex, GPT-6. The exact serving variant and context window are not exposed in this session. The agent used reasoning, repository inspection, code execution, protocol tests and browser-backed Product E2E tools. Cursor acceptance uses the explicit `gpt-5.6-luna[context=272k,reasoning=medium,fast=false]` model. That is the evaluated provider model. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass — affected suites passed; full CI and the retained local failed attempts are recorded separately above. - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green — 56 successful checks, one neutral and four skipped on `f7ec5cc1f0e30c62a829c016ff2013a2a9d79037` - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups — fresh Base review passed on `f7ec5cc1f0e30c62a829c016ff2013a2a9d79037`; zero new comments and no unresolved threads. The earlier Apex finding remains fixed. - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-06 20:48:15 -05:00
DottaandPaperclip	b508a05c43	feat: add internal agent complaints and suggestions (#15367) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Agents use legacy skills or native runner tools to work on tasks. > - Those agents can encounter friction that does not belong in the task thread. > - A complaint should preserve the raw reaction. A suggestion should describe an improvement. > - This pull request adds attributed local storage and both submission paths. > - Agents can submit feedback once and continue their primary work. ## Linked Issues or Issue Description **Subsystem affected** Server, database, shared contracts, runtime skills, and native runner tools. **Problem or motivation** Agents have no default internal channel for incidental complaints and suggestions. Sending this feedback through task comments adds noise and can alter task workflows. **Proposed solution** Store free-form feedback in the current instance database. Derive agent, run, company, and task attribution from active authority. Provide default legacy skills and provider-neutral native actions. Keep the instructions close to Warp's MIT-licensed originals. **Alternatives considered** Task comments and external Slack delivery add unwanted side effects. Mandatory suggestion fields and short editorial limits would discard useful feedback. This release has no listing API, UI, read tool, automatic triage, or external forwarding. **Roadmap alignment** This is a maintainer-requested addition to the existing runtime skills and runner tool paths. It does not duplicate a listed roadmap milestone. Searches for complaint tooling, suggestion-box, and agent commentary found no overlapping public PR or issue. ## What Changed - Add the company-scoped `agent_commentary` table, shared validation, and idempotent migration `0310`. - Add one transactional service and the agent-only POST route. Validate active authority before writes or replay. Redact known credentials. Commit a content-free audit with each new record. - Add `submit_complaint` and `submit_suggestion` to standard, ask, and planning modes. Keep review, revocation, and completion restrictions. Store replay identity on the commentary row. - Mount `complain` and `suggestion-box` by default for legacy agents. Bundle a dependency-free Node.js stdin helper in the operational skill and allow its POST through the sandbox bridge. - Preserve Warp's complaint voice and suggestion guidance, with attribution and local transport adaptations. Keep source attribution and MIT notices in each skill's LICENSE, outside runtime instructions. - Document custom-runtime HTTP use and database inspection. Add real-database tests and a repeatable live Codex smoke for local and Daytona execution. - Pin the lagging-source migration fixture before the identity-repair migration so later migrations preserve its regression coverage. ## Verification - Personally ran real Codex submissions in all four environments on 2026-10-06. Local runs passed at 20:35 UTC. Daytona native passed at 20:31 UTC; Daytona legacy passed at 20:33 UTC. Each stored exactly two rows with company, agent, run, and task attribution, wrote the continuation marker, exited zero, created no task comments, and left task status unchanged. Each recorded two content-free activity entries. - Daytona used production provider hooks, real remote execution and file transfer, the legacy queue callback bridge, and native private WebSocket ingress. The current Linux runner was built from `abf47b595`, staged, and verified against controller contracts. Both sandboxes were confirmed deleted. This is a focused feedback transport smoke; it does not claim full Runner E2E catalog or browser qualification. - The immutable base image and Linux binary digest are recorded in [the verification documentation](https://github.com/paperclipai/paperclip/blob/codex/agent-commentary/doc/agent-commentary.md#verification). The smoke script can save content-free JSON evidence. No credentials or feedback bodies are in these reports. | Environment | Runner | Complaint row | Suggestion row | | --- | --- | --- | --- | | local | legacy Codex | `59413a00-1de2-4bb1-bcc6-9c4b54c64aa6` | `3db2364d-3e15-4f47-846f-875d3902999d` | | local | native Codex | `5da22b5f-41df-4de5-8ba0-d9345ab01267` | `2d5abe17-dd41-403c-a5ee-4729f2d58921` | | daytona | legacy Codex | `27c9d0aa-8477-409f-9da0-e8ffa48dee50` | `209681c9-d1e9-4ce1-999e-48fa07692389` | | daytona | native Codex | `6eb001bb-4bcf-43f7-8717-f662f53dc7c3` | `77c383d8-a997-49e5-a33e-25c70e15c0b2` | - Run the local check with `node cli/node_modules/tsx/dist/cli.mjs server/scripts/verify-agent-commentary-live.ts`. The documentation gives the Daytona invocation. Both use disposable instance databases and normal Codex provider usage. - Repository `pnpm -r typecheck` and `pnpm build` passed after the test extension. The build includes runner generation, contracts, and replay checks. The smoke scripts also passed a separate TypeScript check. The lagging-source migration regression passed. All equivalent current-head Vitest CI shards passed. The local monolithic `pnpm test:run` invocation was stopped after CI supplied that coverage; it did not complete locally. - Focused tests cover company isolation, spoofing, revoked credentials, stale ownership, post-finish rejection, concurrent replay, conflicting keys, atomic rollback, and deletion through existing services. Boundary tests cover empty text, Unicode, text beyond 8,000 characters, and the 524,288-character ceiling without truncation. Mounting tests cover Codex, Claude, and sandbox staging. Helper tests cover standalone Node execution, stdin, invalid UTF-8, redirects, HTTP failure, and its deadline. Privacy and bridge tests cover successful and rejected requests. - Instructions were compared with Warp's originals. MIT notices and source credits live only in LICENSE files. Native tools preserve truthful disclosure when asked, without routine announcements. - [Full CI](https://github.com/paperclipai/paperclip/actions/runs/37508559190) and Greptile 5/5 passed on the earlier feature commit `5209c3501`. The later head found the migration-fixture assumption fixed in this update. On `8a4965164`, all 55 check contexts passed after one browser shard rerun. Its initial reviewer signoff failure also passed an isolated local browser run (1 test). Greptile scored that head 5/5 and identified one smoke cleanup gap. `6ecbafb0b` fixes failed-acquisition cleanup with four passing tests and a passing smoke-script typecheck. Fresh CI is pending for this final test-only fix. No commentary production code changed during verification. ## Risks - Feedback is internally attributed. It is not anonymous. Existing redaction removes known credentials, but agents must still omit sensitive content. Normal provider transcripts can include their submitted arguments. - Default skill availability changes for existing legacy agents. Runtime policy filtering still applies. The helper uses the existing Node.js runtime with no extra dependencies; custom runtimes can call the HTTP endpoint. - Feedback is removed with its run, agent, or company. Task deletion clears only the issue pointer. Normal database backups include the table. - The migration is additive and has no backfill. Writes serialize on the active run for replay consistency. No server suggestion quota is imposed. ## Model Used OpenAI `gpt-6-astra` through Codex, with `xhigh` reasoning effort and a reported 258,400-token context window. Capabilities used: repository inspection, code execution, and live runtime verification. No subagents were used. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-06 16:14:06 -05:00
4 people	cad26c6bfb	fix(tool-gateway): bound MCP discovery memory and concurrency (#14864) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - Agents discover governed tools through the MCP gateway. > - A listing repeated policy and full run-row reads for each catalog tool. > - Parallel listings multiplied those allocations during run startup. > - One 900-tool baseline listing used 11,489 queries and about 1.7 GiB of extra heap in a fixture. > - This pull request shares reads within a listing and bounds whole listings across the process. > - The benefit is lower discovery memory use while execution still checks current policy. ## Linked Issues or Issue Description Refs #13115. Its on-demand target change affects the same listing loop. **What happened?** MCP discovery repeated roughly 13 reads per tool. Full run snapshots and repeated connection configurations caused large allocations. Per-listing bounds alone did not limit concurrent listings across gateways. **Expected behavior** Discovery reads shared inputs once per listing. The process bounds active and queued listings. Catalog payload size and policy evaluation still grow with the catalog. Tool execution checks current access rules. **Steps to reproduce** Create a company with a remote MCP connection, 900 catalog tools, large schemas, and a large run snapshot. Send concurrent tools/list requests using a run-bound gateway token. Run the committed benchmark for a deterministic reproduction. **Paperclip version or commit** Baseline: f2e0f19630. Measured on Node 26.4.0 on macOS. ## What Changed - Keep Michael Nguyen's per-listing policy cache, scalar policy reads, 16-decision bound, and catalog/connection split under repeatable read. - Admit two whole listings per process and queue at most 32. Return 503 with tool_discovery_busy when full. - Propagate disconnects to discovery. Stop scheduling new reads and drain started reads before freeing the slot. - Project context IDs in gateway authentication and GitHub runtime discovery. Avoid loading task descriptions and results. - Keep discovery audit counts and a SHA-256 digest instead of the full name list. Retain access and activity audit records. - Sweep expired named gateway tokens at startup and on the existing scheduler. Delete at most 500 per pass. Add an idempotent expiry-index migration. Resolve audit token references atomically so cleanup cannot break admitted requests. - Return GET 405 with Allow: POST on stateless MCP gateway and runtime-tools endpoints. Keep runtime-tools authentication. - Add red-green regressions, HTTP concurrency and policy-revocation coverage, and browser approval assertions. - Commit the benchmark harness, raw results, and resource-bound documentation. ## Verification - Baseline listing regressions failed with 722 queries for 50 tools and 6,422 for 500. The connection-row duplication regression also failed. - Follow-up regressions failed before the fixes for full snapshot reads, abandoned listings, full name-list audits, and expired tokens. - Listing and scheduler tests: 14 pass. Existing gateway/policy suites passed after preserving the cleanup return contract. - Two HTTP journeys pass: initialize, GET/SSE rejection, 16 concurrent 500-tool listings, provider call, policy revocation, and denied retry. Token cleanup during provider dispatch also completes successfully and blocks subsequent requests. - pnpm test:e2e tests/e2e/mcp-user-stories.spec.ts --grep '@mcp-runnable': 8 pass. The approval journey clicks Allow once in the browser. Review screenshots wait for loaded content. - pnpm -r typecheck: passes. pnpm build: passes. - The general server group completed with 14,755 passes and 18 failures. The 17 startup mock failures were fixed; all 21 startup tests pass on rerun. The one Discord timing failure passed on the unchanged baseline and on rerun (74 tests). UI and CLI groups pass 7,632 tests. Shared and skill groups pass 853 tests. The remaining database and adapter groups pass 3,010 tests with one worker after a macOS shared-memory limit interrupted a parallel run. All 149 serialized route files pass (2,762 tests). - At 900 tools, one listing falls from 11,489 to 36 queries and from about 1.7 GiB to 37 MiB of extra heap. Sixteen concurrent listings used 169–187 MiB of extra heap. Four connections used 39 queries per listing. - Latest-head verification: 54 successful checks and two expected skips on 5c0793090c. Fresh Greptile review: 5/5 with no unresolved threads. - Reproduce with server/scripts/benchmark-tool-gateway-listing.ts. See doc/mcp-discovery-performance.md and doc/benchmarks/2026-10-01-mcp-discovery.json. ## Risks - The process-wide FIFO queue can increase discovery latency. Excess callers must retry 503 responses. - Cancellation applies to discovery. Started database reads finish before their slot is released. - Audit consumers must use visibleToolCount and visibleToolsHash instead of visibleTools. - The expiry index can briefly lock the token table during migration. Sweeps preserve unexpired and non-expiring tokens. - Measurements use isolated fixtures and deterministic providers. They do not establish a production heap limit or affected installation count. Rate-limit reads remain uncached. ## Model Used - Original listing optimization: Anthropic Claude Opus 5.5 (claude-opus-5-5), Claude Code, extended thinking and tool use, as recorded by the original author. - Follow-up fixes and verification: OpenAI Codex, GPT-6, with shell execution, file edits, database fixtures, and browser tests. The exact serving model ID and context window are not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with Fixes / Closes / Refs OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links - [x] My branch name describes the change and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> Co-authored-by: Dotta <bippadotta@protonmail.com> Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-10-02 07:45:27 -05:00
Devin FoleyandPaperclip	600e552d7b	fix: attribute Sentry errors to the loaded source release (#13719) ... Attribute optional server and browser Sentry events to their source build. Use validated build commits for Docker and source/npm artifacts, preserve explicit server release overrides, and keep cached browser bundles tied to the commit they loaded. Verify 127 focused tests, server/UI typechecks, Docker and source build stamps, all 53 CI checks, and Greptile 5/5 with no unresolved comments. Co-Authored-By: Paperclip <noreply@paperclip.ing>	2026-09-20 08:08:33 -07:00
Nicky LeachandClaude Sonnet 5	04a9f89ede	fix(server): bundle the vendored paperclip-runner instead of hand-mirroring its deps (#13121) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The server package is published to npm, but its native-runtime driver code lives in `packages/paperclip-runner`, a private workspace package that is never published > - So the server build vendors the runner's compiled code by copying it in directly, instead of taking it as a normal npm dependency > - But `cp -R` only copies code, not `node_modules`, so every npm package the runner imports has to be re-declared by hand in `server/package.json` to stay resolvable once vendored > - That hand mirroring step is silent and easy to forget: it missed `smol-toml` in #13110, and CI stayed green while production crash-looped 3 seconds into every start (#13116) > - This pull request keeps the proven `cp -R` vendor step exactly as it was, and adds a build check that derives the required dependency set from an esbuild scan of the vendored entry points, failing loudly and precisely if any package the runner actually needs isn't declared in `server/package.json` > - The benefit is the dependency list is now verified against the real module graph instead of hand-copied, so this exact class of bug cannot pass a green build again -- without changing how the runner's code is laid out on disk, which several of its modules depend on for unrelated filesystem lookups ## Linked Issues or Issue Description Refs: #13110 (introduced the `smol-toml` import that the vendor step could not resolve), #13116 (the follow-up fix for a different oversight in the same PR), #11813 (the same "vendored package installed outside the monorepo dependency graph loses a runtime dependency" failure shape, in the Kubernetes plugin installer instead of the server build) No issue exists yet for this specific incident, so per CONTRIBUTING.md option (B): **What happened?** `packages/paperclip-runner/package.json` added `smol-toml` as a runtime dependency in #13110. `server/package.json`'s existing convention (see `acpx`, `ajv`) requires mirroring every runtime dependency the vendored runner imports into `server/package.json` too, because the server build copies the runner's compiled `dist/` tree with `cp -R` -- code only, no `node_modules`. That mirroring step was missed. CI never runs the compiled server (`node dist/index.js`); it only builds it, type-checks it, and boots the app in dev mode via `tsx` against source, which never touches the vendored path. So the PR merged green, and the deployed server crash-looped in production: ``` Error [ERR_MODULE_NOT_FOUND]: Cannot find package 'smol-toml' imported from /srv/paperclip/app/server/dist/vendor/paperclip-runner/drivers/codex/codex-startup-trust.js ``` **Expected behavior** Any npm package the vendored runner code needs at runtime should either be guaranteed present by construction, or the build should fail with a clear, actionable error before the change ever reaches a PR -- not silently pass CI and fail only once deployed. **Steps to reproduce (the original incident)** 1. Add a new runtime dependency to `packages/paperclip-runner/package.json` (e.g. a TOML parser) and use it from a module reachable from the runner's `index.ts` export graph. 2. Do not add the same dependency to `server/package.json`. 3. Run `pnpm build` in `server/` -- it succeeds. 4. Run `node dist/index.js` -- it crashes with `ERR_MODULE_NOT_FOUND` for the new package. ## What Changed - **Revision note:** the first version of this PR replaced the `cp -R` vendor step with an esbuild bundle of the runner's entry points. Greptile's review correctly caught that this broke packaged ACPX/OpenCode provider startup: several runner modules resolve sibling build artifacts via `import.meta.url`-relative filesystem paths (not JS imports) at whatever depth their source file sits at, and bundling collapses/rearranges that layout. The current version keeps the file layout untouched and only adds verification. See the second commit's message for the full explanation. - `server/scripts/verify-runner-vendor-dependencies.mjs`: a new build step that runs esbuild with `write: false` (a pure module-graph scan -- nothing is written to disk) against the runner's two entry points server actually imports (`index.js`, `testing.js`), with `packages: "external"` so its metafile reports exactly which npm packages the code needs at runtime. It fails with a precise, actionable error if any of them isn't declared in `server/package.json`'s `dependencies`. This is deliberately more precise than "mirror every dependency the runner declares": running it against this repo's real manifests shows `packages/paperclip-runner/package.json` declares dependencies (`react-markdown`, the codex/opencode CLI packages, ...) that only its unrelated `./react` and `./browser` export subpaths use -- server never imports those, so a blanket mirror rule would demand dependencies server doesn't actually need. - `server/package.json`: added the new check into the `build` script (right after the runner is built, before the expensive `tsc`/copy steps, so it fails fast), and added `smol-toml` (`^1.4.2`, matching `packages/paperclip-runner/package.json`) to `dependencies` -- the actual missing piece from #13110. The vendor step (`cp -R ../packages/paperclip-runner/dist/. dist/vendor/paperclip-runner/`) is unchanged from before this PR. - Widened `server/vitest.config.ts`'s `include` to also run `scripts/**/*.test.mjs`, and added `server/scripts/verify-runner-vendor-dependencies.test.mjs` unit-testing the pure dependency-diff function (`findMissingVendorDependencies`) against the exact shape of the `smol-toml` incident, plus a case proving an unreachable dependency (like `react-markdown`) is correctly never flagged. - Updated `server/src/__tests__/server-package-build-script.test.ts`'s existing build-script assertions to match. ## Verification - `node --check` on the new script -- syntax OK. `node -e` JSON-parsed the edited `package.json` files after every edit. - Unit-verified `findMissingVendorDependencies` directly against: nothing missing, one missing (the `smol-toml` shape), and multiple missing with stable sort order. - Ran the actual check against this repo's real `packages/paperclip-runner/package.json` and `server/package.json` (via a standalone `node` invocation, since `pnpm build` needs a Rust toolchain this sandbox doesn't have -- see below) to see its real output. It correctly reported `smol-toml`, `acpx`, and `ajv` as already satisfied, and did **not** flag `react-markdown`, `remark-gfm`, `json-schema-to-ts`, `opencode-ai`, `@openai/codex`, or the `@agentclientprotocol/*` packages -- confirming the "reachable from index.js/testing.js" scoping works as intended and doesn't demand dependencies server doesn't need. - Built a fixture tree at a real filesystem location (not just in-process) mimicking `packages/paperclip-runner`: a manifest declaring both a reachable dependency (`smol-toml`, actually imported by the fixture's `dist/index.js`/`testing.js`) and an unreachable one (`react-markdown`, declared but never imported). Copied the real script next to a fixture `server/package.json` and ran it as its own process (`node server/scripts/verify-runner-vendor-dependencies.mjs`), twice: - `smol-toml` missing from the fixture's server dependencies → the script throws with the exact intended message and exits 1. - `smol-toml` present, `react-markdown` absent → the script exits 0, proving the unreachable dependency is correctly never flagged. - Not verified locally: the real `packages/paperclip-runner` build, and therefore the check running end-to-end against its true `dist/index.js`/`dist/testing.js`. This sandbox has no Rust toolchain (the runner's own build compiles a Cargo binary) and an incomplete workspace install. CI's `Build` job (`.github/workflows/pr-trusted.yml`) runs the real thing; I'll watch it on this PR. ## Risks - The check's precision (scoping to what's reachable from `index.js`/`testing.js`, rather than every declared runner dependency) means a dependency that becomes reachable through some *other* export subpath server starts importing later would need this check's entry-point list updated too. That list is a 2-line array in the script with a comment explaining why, and matches the only two paths server/src actually imports today (verified by a repo-wide search). - This only changes a build-time check; the actual vendored file layout (`cp -R` of the runner's whole compiled tree) is byte-for-byte the same as before this PR, so there's no behavioral change to the running server beyond `smol-toml` now being present as intended. - I could not exercise the real Rust-backed build locally (no Cargo in this sandbox); see Verification. I am relying on CI's `Build` job to confirm this end to end and will fix forward if it surfaces something the fixture-based testing didn't. ## Model Used Claude Sonnet 5 (`claude-sonnet-5`), via Claude Code. Standard (non-extended) reasoning mode, with tool use (Bash, Read, Edit/Write, `gh`) for repository exploration, local esbuild-based verification against hand-built fixtures, and PR authoring. No extended thinking mode. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [ ] I have run tests locally and they pass — see Verification: full local verification was not possible (no Rust toolchain, incomplete workspace install in this sandbox); watching CI's `Build` job on this PR to confirm. - [x] I have added or updated tests where applicable - [ ] I have updated relevant documentation to reflect my changes — no user-facing docs describe this internal build step; none needed updating. - [x] I have considered and documented any risks above - [ ] All Paperclip CI gates are green — pending, will monitor. - [ ] Greptile is 5/5 with no open P2s, recommendations, or follow-ups — addressed the first review round; watching for re-review. - [x] I will address all Greptile and reviewer comments before requesting merge 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Claude Sonnet 5 <noreply@anthropic.com>	2026-09-09 16:38:17 -07:00
Nicky LeachandPaperclip	5a1ce7aed8	fix(server): stamp built commit into service.version (#11748) ... ## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work > - The server emits OpenTelemetry spans so operators can trace agent work > - Each span needs a service version that identifies the code that produced it > - The current service version comes from a static environment value and can become stale after a rebuild > - This pull request records the built commit and resolves the service version from the build stamp, runtime Git, the environment, or an unknown fallback > - The benefit is trace data that identifies the correct built commit during development and deployment ## Linked Issues or Issue Description **What happened?** The server used a static `OTEL_SERVICE_VERSION` value for every OpenTelemetry span. Rebuilds could produce traces with an old commit value. **Expected behavior** The server should report the built commit when a build stamp exists. It should use runtime Git, the environment value, or `unknown` as fallback. **Steps to reproduce** 1. Set `OTEL_SERVICE_VERSION` to an old commit value. 2. Build the server at a different commit. 3. Start the server and inspect the OpenTelemetry service version. 4. Confirm that the built commit takes precedence over the old environment value. ## What Changed - Add a build script that writes the short Git commit to `dist/build-info.json`. - Resolve `service.version` from the build stamp, runtime Git, the environment, or `unknown`. - Log the resolved service version once during server startup. - Add tests for the resolution order and safe behavior without Git. - Document the resolution order in `doc/observability.md`. ## Verification - `pnpm --filter @paperclipai/server build` - `npx vitest run server/src/__tests__/service-version.test.ts` - `pnpm --filter @paperclipai/server typecheck` - Confirm that the build stamp contains the short commit. - Confirm that the stamp wins over the environment value. - Confirm that a build without Git exits successfully without a stamp. ## Risks The server now prefers the built commit over `OTEL_SERVICE_VERSION`. A build without Git uses the existing environment value or `unknown`. The change needs no schema migration and has a single-commit rollback path. ## Model Used OpenAI Codex, GPT-5, tool use and code execution. The runtime does not expose the context window size or reasoning mode. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>	2026-08-19 21:20:40 -07:00
vanductai	9a70a4edaa	fix(server): use stable tsx/cli entry point in dev-watch ... The dev-watch script was importing tsx via the internal path 'tsx/dist/cli.mjs', which is an undocumented implementation detail that broke when tsx updated its internal structure. Switched to the stable public export 'tsx/cli' which is the officially supported entry point and won't break across versions.	2026-03-28 06:42:03 +07:00
dottaandPaperclip	9ddf960312	Harden dev-watch excludes for nested UI outputs ... Co-Authored-By: Paperclip <noreply@paperclip.ing>	2026-03-26 12:35:19 -05:00
dottaandPaperclip	ab82e3f022	Fix worktree runtime isolation recovery ... Co-Authored-By: Paperclip <noreply@paperclip.ing>	2026-03-26 11:12:39 -05:00