diff --git a/server/src/__tests__/native-session-resumption.test.ts b/server/src/__tests__/native-session-resumption.test.ts
index e85c5c9782f..005da625114 100644
--- a/server/src/__tests__/native-session-resumption.test.ts
+++ b/server/src/__tests__/native-session-resumption.test.ts
@@ -241,6 +241,7 @@ describe("P6-25 persisted reaper-to-finalization recovery", () => {
   const projectId = randomUUID();
   const projectWorkspaceId = randomUUID();
   const executionWorkspaceId = randomUUID();
+  const newerExecutionWorkspaceId = randomUUID();
   const issueId = randomUUID();
   const freshIssueId = randomUUID();
   const runId = randomUUID();
@@ -403,8 +404,23 @@ describe("P6-25 persisted reaper-to-finalization recovery", () => {
       cwd: repoRoot,
       providerType: "local_fs",
     });
+    await db.insert(executionWorkspaces).values({
+      id: newerExecutionWorkspaceId,
+      companyId,
+      projectId,
+      projectWorkspaceId,
+      sourceIssueId: issueId,
+      mode: "shared_workspace",
+      strategyType: "project_primary",
+      name: "Newer issue workspace",
+      status: "active",
+      cwd: repoRoot,
+      providerType: "local_fs",
+    });
     await db.update(issues).set({
-      executionWorkspaceId,
+      // Simulate a newer run moving the issue-level pointer before the older native run is
+      // recovered. The older run must still restore its own immutable workspace binding.
+      executionWorkspaceId: newerExecutionWorkspaceId,
       executionWorkspacePreference: "reuse_existing",
       executionWorkspaceSettings: { mode: "shared_workspace" },
     }).where(eq(issues.id, issueId));
@@ -523,8 +539,15 @@ describe("P6-25 persisted reaper-to-finalization recovery", () => {
     expect(new Set(effects.map((effect) => effect.decisionId))).toEqual(new Set([decisions[0]!.id]));
     expect(effects.map((effect) => effect.effectKind).sort()).toEqual(["issue_status_projection", "release_checkout"]);
     await expect(db.select().from(issues).where(eq(issues.id, issueId))).resolves.toEqual([
-      expect.objectContaining({ status: "done", statusVersion: 1, lastStatusDecisionId: decisions[0]!.id }),
+      expect.objectContaining({
+        status: "done",
+        statusVersion: 1,
+        lastStatusDecisionId: decisions[0]!.id,
+        executionWorkspaceId: newerExecutionWorkspaceId,
+      }),
     ]);
+    await expect(db.select().from(executionWorkspaces).where(eq(executionWorkspaces.companyId, companyId)))
+      .resolves.toHaveLength(2);
     await expect(db.select().from(nativeRunFinalizations).where(eq(nativeRunFinalizations.runId, runId))).resolves.toEqual([
       expect.objectContaining({ phase: "committed", resultId: expect.any(String), assessmentId: expect.any(String), decisionId: decisions[0]!.id }),
     ]);
diff --git a/server/src/services/heartbeat.ts b/server/src/services/heartbeat.ts
index f3ceaa3aced..593f07a394e 100644
--- a/server/src/services/heartbeat.ts
+++ b/server/src/services/heartbeat.ts
@@ -14433,12 +14433,26 @@ export function heartbeatService(db: Db, options: HeartbeatServiceOptions = {})
         context.paperclipTaskMarkdownCompact = redactedWakeContext.paperclipTaskMarkdownCompact;
       }
     }
-    const requestedExecutionWorkspaceId = readNonEmptyString(issueRef?.executionWorkspaceId);
+    // A native run's execution input is immutable once persisted. Recovery must therefore
+    // restore the workspace bound to that input rather than consulting the issue's current
+    // workspace pointer: a newer run may already have moved or cleared the issue binding while
+    // this older provider session is still recoverable.
+    const persistedRunnerProfile = parseObject(run.runnerProfileJson);
+    const persistedNativeExecutionInput =
+      run.runtimeMode === "native" && persistedRunnerProfile.nativeExecutionInput !== undefined
+        ? parseNativeExecutionInput(persistedRunnerProfile.nativeExecutionInput)
+        : null;
+    const nativeRecoveryExecutionWorkspaceId =
+      persistedNativeExecutionInput?.binding.executionWorkspaceId ?? null;
+    const requestedExecutionWorkspaceId = nativeRecoveryExecutionWorkspaceId
+      ?? readNonEmptyString(issueRef?.executionWorkspaceId);
     const existingExecutionWorkspace =
       requestedExecutionWorkspaceId ? await executionWorkspacesSvc.getById(requestedExecutionWorkspaceId) : null;
     const workspaceReuseRequest = resolveExecutionWorkspaceReuseRequestForIssue({
       issueExecutionWorkspaceId: requestedExecutionWorkspaceId,
-      issueExecutionWorkspacePreference: issueRef?.executionWorkspacePreference ?? null,
+      issueExecutionWorkspacePreference: nativeRecoveryExecutionWorkspaceId
+        ? "reuse_existing"
+        : issueRef?.executionWorkspacePreference ?? null,
       existingExecutionWorkspaceStatus: existingExecutionWorkspace?.status ?? null,
     });
     const requestedShouldReuseExisting = workspaceReuseRequest.requestedShouldReuseExisting;
@@ -15187,7 +15201,7 @@ export function heartbeatService(db: Db, options: HeartbeatServiceOptions = {})
         cleanupReason: null,
       });
     }
-    if (issueId && persistedExecutionWorkspace) {
+    if (issueId && persistedExecutionWorkspace && !nativeRecoveryExecutionWorkspaceId) {
       const nextIssueWorkspaceMode = issueExecutionWorkspaceModeForPersistedWorkspace(persistedExecutionWorkspace.mode);
       const shouldSwitchIssueToExistingWorkspace =
         issueRef?.executionWorkspacePreference === "reuse_existing" ||
@@ -15887,9 +15901,9 @@ export function heartbeatService(db: Db, options: HeartbeatServiceOptions = {})
             });
         nativeRunnerInstanceId = run.runnerInstanceId ?? randomUUID();
         const nativeSessionId = run.nativeSessionId ?? randomUUID();
-        const persistedProfile = parseObject(run.runnerProfileJson);
-        if (persistedProfile.nativeExecutionInput !== undefined) {
-          nativeExecution = parseNativeExecutionInput(persistedProfile.nativeExecutionInput);
+        const persistedProfile = persistedRunnerProfile;
+        if (persistedNativeExecutionInput) {
+          nativeExecution = persistedNativeExecutionInput;
           if (
             nativeExecution.binding.companyId !== agent.companyId
             || nativeExecution.binding.runId !== run.id