fix(workspaces): restore archived commits from verified project objects (#19138)

## Thinking Path

> - Paperclip is the open source app people use to manage AI agents for
work.
> - An ephemeral web server must preserve historical task files outside
its local disk.
> - Archived isolated Git workspaces can have a successful
branch-deletion receipt.
> - Their private checkout can be gone while the project cache still
owns the exact commit.
> - The importer rejects that cache because it applies private-checkout
validation.
> - This pull request validates the managed object source for
receipt-based restoration.
> - The importer restores the recorded commit without using the current
shared working tree.

## Linked Issues or Issue Description

Refs #18826, #18943, #19038.

**What happened?**

An archived isolated workspace has a valid successful cleanup receipt
and a retained commit. Offline migration rejects it with
`archived_git_source_unavailable,local_source_unsafe_or_missing`. The
private checkout was removed. The company and project cache still
contains the exact commit.

**Expected behavior**

Restore the immutable commit from the verified project object cache.
Keep strict validation for saved private edit recipes. Reject missing
receipts, a foreign cache, a different origin and revoked cleanup
authority.

**Steps to reproduce**

1. Create an isolated Git workspace from a managed project cache.
2. Archive it and retain its successful branch-deletion receipt.
3. Remove its private checkout while the verified project cache retains
that commit.
4. Attempt offline workspace migration.

## What Changed

- Extract the existing managed Git object-source validator.
- Use that validator only for exact successful deletion receipts that
refer to a canonical company and project cache.
- Keep private restore-point source validation unchanged.
- Fetch immutable objects at the recorded commit into private scratch.
Recheck receipt authority before publication.
- Add real Git and database tests for restoration and rejected authority
changes. Document the preservation path.

## Verification

- 129 focused migration, concurrency and isolated-source tests pass
across three files.
- The new restoration case fails against the previous importer with the
reported source-unavailable error.
- Tests remove the old home and restore the retained commit. A newer
shared working tree and unrelated files are excluded.
- Tests reject a foreign company cache, wrong origin, missing receipt
and receipt revocation during upload.
- Local server typecheck has no diagnostics in changed files. Stale
linked dependency declarations prevent a clean local whole-server
result. Current-head full CI passes (54 passing checks, three skipped).
Greptile is 5/5 with no unresolved review threads.
- A replay of the 32 affected records is running in an isolated staging
copy. Two committed owner overlays are under test. This is not
released-image or serving-instance acceptance.

## Risks

- A deletion receipt must identify an exact commit that still exists.
Missing objects continue to block migration.
- Shared working-tree contents must never substitute for archived
private files. Only the recorded commit is fetched through this path.
- The change does not recreate private edit authority, retire recovery
records or alter serving configuration.

## Model Used

OpenAI GPT-6.1 Codex, exact model ID `gpt-6.1-sol`. Used for reasoning,
code editing, shell tools and test execution. The runtime does not
expose its context-window size.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge

Co-authored-by: Paperclip <noreply@paperclip.ing>

server/src/services/git-workspace-restoration.ts

@@ -68,6 +68,12 @@ export async function verifiedGitCacheSource(workspace: Workspace, sourcePath: s
     if (sourcePath !== privateSource) throw new GitCacheRestorationFailure();
     return (await verifiedRecordedIsolatedRemoteSource(workspace))!;
   }
+  return verifiedManagedGitObjectSource(workspace, sourcePath);
+}
+
+/** Read immutable commit objects from the company/project cache. This does not
+ * certify the files or restore-point contents of an isolated task checkout. */
+export async function verifiedManagedGitObjectSource(workspace: Workspace, sourcePath: string) {
   if (!managedSourcePaths(workspace).includes(sourcePath)) throw new GitCacheRestorationFailure();
   const root = resolvePaperclipInstanceRoot();
   const actual = await fs.realpath(sourcePath);

server/src/services/remote-workspace-migration-git.ts

@@ -11,7 +11,7 @@ import { createIssueGitRemoteAuthProvider } from "./git-credentials.js";
 import { applyGitRestorePointToWorktree, ensureGitRestorePointCommit, loadGitRestorePoint } from "./git-restore-point-storage.js";
 import { restoreGitWorkspaceContents } from "./git-workspace-contents.js";
 import { ensureSavedGitCommit, gitRestorePointExpired, managedSourcePaths, readGitCacheRestoration,
-  verifiedGitCacheSource, type GitCacheRestoration } from "./git-workspace-restoration.js";
+  verifiedGitCacheSource, verifiedManagedGitObjectSource, type GitCacheRestoration } from "./git-workspace-restoration.js";
 import { localRepositoryPath } from "./local-repository-path.js";
 import { materializeManagedProjectWorkspace } from "./managed-repository-checkout.js";
 
@@ -24,6 +24,10 @@ export type ArchivedGitMigrationSource = {
 };
 const execute = promisify(execFile);
 const unavailable = () => new Error("remote_workspace_migration_archived_git_source_unavailable");
+function verifiedReceiptObjectSource(workspace: Workspace, sourcePath: string) {
+  return managedSourcePaths(workspace).includes(sourcePath)
+    ? verifiedManagedGitObjectSource(workspace, sourcePath) : verifiedGitCacheSource(workspace, sourcePath);
+}
 async function git(cwd: string, args: string[]) {
   return (await execute("git", ["-c", "core.fsmonitor=false", "-c", `core.hooksPath=${os.devNull}`, "-C", cwd, ...args], {
     timeout: 120_000, maxBuffer: 1024 * 1024,
@@ -61,7 +65,7 @@ export async function inspectArchivedGitMigrationSource(db: Pick<Db, "select">,
       eq(projectWorkspaces.companyId, workspace.companyId), workspace.projectId ? eq(projectWorkspaces.projectId, workspace.projectId) : undefined)) : [];
   const sourcePath = projectWorkspace?.cwd ?? managedSourcePaths(workspace)[0];
   if (!sourcePath || projectWorkspace?.repoUrl && projectWorkspace.repoUrl !== workspace.repoUrl) throw unavailable();
-  await verifiedGitCacheSource(workspace, sourcePath);
+  await verifiedReceiptObjectSource(workspace, sourcePath);
   const commit = await git(sourcePath, ["rev-parse", "--verify", `${abbreviation}^{commit}`]);
   if (!/^[a-f0-9]{40}$/.test(commit)) throw unavailable();
   return { commit, sourcePath, cleanupOperationId: operation.id, recipe: null };
@@ -80,7 +84,12 @@ export async function materializeArchivedGitMigrationSource(input: {
     throw error;
   });
   if (present) {
-    const verified = await verifiedGitCacheSource(workspace, source.sourcePath);
+    // A deletion receipt owns a specific committed tree. Its objects can come
+    // from the verified project cache after the private checkout was removed.
+    // Saved private edits still require their original restore-point source.
+    if (!source.recipe && !source.cleanupOperationId) throw unavailable();
+    const verified = source.recipe ? await verifiedGitCacheSource(workspace, source.sourcePath)
+      : await verifiedReceiptObjectSource(workspace, source.sourcePath);
     await fs.mkdir(cwd, { mode: 0o700 }); await git(cwd, ["init", "--quiet"]);
     // Fetch objects, never the current working tree of a shared project root.
     const presentCommit = await git(verified, ["cat-file", "-e", `${source.commit}^{commit}`]).then(() => true, () => false);

server/src/services/remote-workspace-migration.test.ts

@@ -7,7 +7,7 @@ import { promisify } from "node:util";
 import { createServer, type Server } from "node:http";
 import { pathToFileURL } from "node:url";
 import { afterAll, afterEach, beforeAll, beforeEach, describe, expect, it, vi } from "vitest";
-import { eq } from "drizzle-orm";
+import { and, eq } from "drizzle-orm";
 import { activityLog, agents, environmentLeases, heartbeatRuns, nativeRunFinalizations, nativeRunResults, completionContracts, applyPendingMigrations, closeRegisteredClients, companies, createDb, executionWorkspaceSnapshots,
   executionWorkspaceRuntimeLeases, executionWorkspaces, issues, projects, projectWorkspaces, workspaceOperations, workspaceRuntimeServices } from "@paperclipai/db";
 import { readRemoteWorkspaceAuthority } from "@paperclipai/shared";
@@ -31,6 +31,8 @@ import { claimNativeRestartRecoveries } from "./native-runtime/native-restart-re
 import { attemptNativeWorkspaceFinalization } from "./native-runtime/native-workspace-finalizer.js";
 import { managedProjectCheckoutName } from "./managed-project-checkout-name.js";
 import { captureGitWorkspaceContents, readManagedCheckoutContents } from "./git-workspace-contents.js";
+import { isolatedRemoteSourcePath } from "./isolated-remote-workspace-source.js";
+import { verifiedGitCacheSource } from "./git-workspace-restoration.js";
 
 const execute = promisify(execFile);
 const git = async (cwd: string, ...args: string[]) => (await execute("git", ["-C", cwd, ...args], { env: { ...process.env,
@@ -463,6 +465,66 @@ describe.skipIf(!support.supported)("remote workspace migration", () => {
     expect(await fs.readFile(path.join(targetDir, "base.txt"), "utf8")).toBe("base\n");
     expect(await fs.readFile(path.join(targetDir, "saved.txt"), "utf8")).toBe("original saved work\n");
   });
+  it.each(["valid", "foreign-cache", "wrong-origin", "missing-receipt", "revoked-receipt"])("recovers deleted isolated history only from an authorized receipt and project object cache (%s)", async state => {
+    const f = await gitArchiveFixture(), privateBase = isolatedRemoteSourcePath(f.companyId, f.issueId);
+    const privateCwd = path.join(privateBase, ".paperclip", "worktrees", f.branchName);
+    await fs.mkdir(path.dirname(privateBase), { recursive: true });
+    await git(root, "clone", "--no-hardlinks", f.base, privateBase);
+    await git(privateBase, "remote", "set-url", "origin", f.repoUrl);
+    await git(privateBase, "worktree", "add", "-b", f.branchName, privateCwd, `origin/${f.branchName}`);
+    await git(privateBase, "merge", "--ff-only", f.branchName);
+    await git(privateBase, "worktree", "remove", privateCwd);
+    const receipt = await git(privateBase, "branch", "-d", f.branchName);
+    await git(f.base, "merge", "--ff-only", f.branchName); await git(f.base, "worktree", "remove", f.cwd);
+    await git(f.base, "branch", "-d", f.branchName); await fs.rm(privateBase, { recursive: true });
+    const closedAt = new Date();
+    await db.update(executionWorkspaces).set({ cwd: privateCwd, providerRef: privateCwd, status: "archived", closedAt,
+      metadata: { createdByRuntime: true, gitBranchOwnershipVersion: 1, isolatedRemoteSource: {
+        schema: "paperclip.isolated-remote-source.v1", companyId: f.companyId, issueId: f.issueId, repoUrl: f.repoUrl } } })
+      .where(eq(executionWorkspaces.id, f.workspaceId));
+    if (state !== "missing-receipt") await db.insert(workspaceOperations).values({ companyId: f.companyId,
+      executionWorkspaceId: f.workspaceId, phase: "worktree_cleanup", status: "succeeded",
+      command: `git --git-dir=temporary branch -d ${f.branchName}`, stdoutExcerpt: receipt,
+      startedAt: new Date(), finishedAt: new Date(), metadata: { cleanupAction: "branch_delete", workspaceId: f.workspaceId,
+        branchName: f.branchName, workspacePath: privateCwd } });
+    // Keep ordinary private-workspace restoration strict. This project cache
+    // supplies immutable Git objects only for the proven deleted commit.
+    await expect(verifiedGitCacheSource(await workspace(f.workspaceId), f.base)).rejects.toThrow();
+    await fs.writeFile(path.join(f.base, "base.txt"), "new shared checkout\n");
+    await fs.writeFile(path.join(f.base, "unrelated.txt"), "not task history\n");
+    await git(f.base, "add", "."); await git(f.base, "commit", "-qm", "new shared default");
+    if (state === "wrong-origin") await git(f.base, "remote", "set-url", "origin", "https://example.invalid/foreign.git");
+    if (state === "foreign-cache") {
+      const foreign = resolveManagedProjectWorkspaceDir({ companyId: randomUUID(), projectId: f.projectId, repoName: "repository" });
+      await fs.mkdir(path.dirname(foreign), { recursive: true }); await fs.rename(f.base, foreign);
+      await db.update(projectWorkspaces).set({ cwd: foreign }).where(eq(projectWorkspaces.id, f.projectWorkspaceId));
+    }
+    if (state === "revoked-receipt") {
+      const put = storage.putFile.bind(storage);
+      storage.putFile = async input => {
+        const result = await put(input);
+        await db.update(workspaceOperations).set({ status: "failed" }).where(and(
+          eq(workspaceOperations.executionWorkspaceId, f.workspaceId), eq(workspaceOperations.phase, "worktree_cleanup")));
+        return result;
+      };
+    }
+    if (state !== "valid") {
+      await expect(migrateRemoteWorkspace({ db, storage, companyId: f.companyId, workspaceId: f.workspaceId, apply: true })).rejects.toThrow();
+      expect(readRemoteWorkspaceAuthority((await workspace(f.workspaceId)).metadata)).toBeNull(); return;
+    }
+    await migrateRemoteWorkspace({ db, storage, companyId: f.companyId, workspaceId: f.workspaceId, apply: true });
+    const row = await workspace(f.workspaceId), authority = readRemoteWorkspaceAuthority(row.metadata)!;
+    expect(row.status).toBe("archived"); expect(authority.source).toMatchObject({ kind: "git", ref: f.commit });
+    await fs.rm(f.base, { recursive: true });
+    const ref = await getWorkspaceSnapshot(db, { ...f, snapshotId: authority.snapshotId! });
+    const archivePath = path.join(root, "isolated-history.pcws"), targetDir = path.join(root, "restored-isolated-history");
+    await loadWorkspaceSnapshotArchive({ storage, reference: ref!, targetPath: archivePath });
+    await restoreRemoteWorkspaceArchive({ archivePath, targetDir, expectedManifestDigest: ref!.manifestDigest });
+    expect(await git(targetDir, "rev-parse", "HEAD")).toBe(f.commit);
+    expect(await fs.readFile(path.join(targetDir, "saved.txt"), "utf8")).toBe("original saved work\n");
+    expect(await fs.readFile(path.join(targetDir, "base.txt"), "utf8")).toBe("base\n");
+    expect(await fs.stat(path.join(targetDir, "unrelated.txt")).catch(() => null)).toBeNull();
+  });
   async function serveRepository() {
     const directory = path.join(root, "http"), bare = path.join(directory, "repository.git");
     await fs.mkdir(bare, { recursive: true }); await git(bare, "init", "--bare", "--initial-branch=main");