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Document provider vault operations

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Co-Authored-By: Paperclip <noreply@paperclip.ing>
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docs/cli/setup-commands.md
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@@ -82,6 +82,13 @@ pnpm paperclipai configure --section secrets
pnpm paperclipai configure --section storage
```
`--section secrets` updates the deployment-level provider used as the fallback
for secrets that do not target a specific company vault. Per-company provider
vaults (named instances, default vault selection, multiple vaults per provider,
coming-soon GCP/Vault) live in the board UI under
`Company Settings → Secrets → Provider vaults` and the
`/api/companies/{companyId}/secret-provider-configs` API.
## `paperclipai env`
Show resolved environment configuration: